RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF116 (Homo sapiens)

Ensembl gene IDs: ENSG00000182795

Ensembl transcript IDs: ENST00000359470.6, ENST00000461135.2

Found 585 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGCAGCCCATCCCCAGCCTACAGGGCGGCCCCTGCCAGATCATaGTTCCCACTGTGGAAGAAGGCATGTACGAGTGAGTGGGCTCAT +
Preference number: 1 (lower is better)
Translates to: HSSPSPAYRAAPARS*FPLWKKACTSEWAH
Trigger: ATGAGCCCACTCACTCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGTAGGCTGGGGATGGGCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp TCCCCAGCCTACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTaGAAGAAGGCATGTACGAGTGAGTGGGCTCATCGGTTGACCTCT +
Preference number: 1 (lower is better)
Translates to: SPAYRAAPARSCFPL*KKACTSEWAHRLTS
Trigger: AGAGGTCAACCGATGAGCCCACTCACTCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGTAGGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp CCCTATCATGCCAGGCTGGGAGAGGCCACTCCTGTATTTGGCAGGTaGCTTGTGCCCAGTGGCATCAAGGCTATGGCAGGGTATAGCAGA +
Preference number: 1 (lower is better)
Translates to: PYHARLGEATPVFGR*LVPSGIKAMAGYSR
Trigger: TCTGCTATACCCTGCCATAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCCCAGCCTGGCATGATAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp TCCCACTGTGGAAGAAGGCATGTACGAGTGAGTGGGCTCATCGGTTaGCCTCTGTGTGAGATGGCACGTGGTCCTACCCTGCAGAGTCAG +
Preference number: 1 (lower is better)
Translates to: SHCGRRHVRVSGLIG*PLCEMARGPTLQSQ
Trigger: CTGACTCTGCAGGGTAGGACCACGTGCCATCTCACACAGAGGTCAACCGATGAGCCCACTCACTCGTACATGCCTTCTTCCACAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp CCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAGTaGGTGGGCTCATCGGTTGACCTCTGTGTGAGATGGCACGTGGTC +
Preference number: 1 (lower is better)
Translates to: PCQIMLPTVEEGMYE*VGSSVDLCVRWHVV
Trigger: GACCACGTGCCATCTCACACAGAGGTCAACCGATGAGCCCACTCACTCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp GTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATaGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCAC +
Preference number: 1 (lower is better)
Translates to: VAACNKGKNLSSFPK*QADPGLVTSLPQQH
Trigger: GTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR GCA 90 bp GGCTCATCGGTTGACCTCTGTGTGAGATGGCACGTGGTCCTACCCTaGAGAGTCAGAGCACAGAATTCCAAGTGTAGCACAGGTGTGGCA +
Preference number: 1 (lower is better)
Translates to: GSSVDLCVRWHVVLP*RVRAQNSKCSTGVA
Trigger: TGCCACACCTGTGCTACACTTGGAATTCTGTGCTCTGACTCTGCAGGGTAGGACCACGTGCCATCTCACACAGAGGTCAACCGATGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp CTTAGCCCAGGCCTTGTCCAGAAGGCTGGAACTGAGAGAGGGATCTaGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGA +
Preference number: 1 (lower is better)
Translates to: LSPGLVQKAGTERGI*QGMSQSPSTVGIPG
Trigger: TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTTCTGGACAAGGCCTGGGCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR TCA 90 bp CACCCATGGCCAGGAATGAGGCACAGGCTTTTGGATGTGCGTGTATaGGCAAACGTACACAGAAACCGCCACACCCACACCTCACATACC +
Preference number: 1 (lower is better)
Translates to: HPWPGMRHRLLDVRV*ANVHRNRHTHTSHT
Trigger: GGTATGTGAGGTGTGGGTGTGGCGGTTTCTGTGTACGTTTGCTCATACACGCACATCCAAAAGCCTGTGCCTCATTCCTGGCCATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp TCCTCATCAGCCGTGACAGACCAAGTCCTCACCCATGGCCAGGAATaGGGCACAGGCTTTTGGATGTGCGTGTATGAGCAAACGTACACA +
Preference number: 1 (lower is better)
Translates to: SSSAVTDQVLTHGQE*GTGFWMCVYEQTYT
Trigger: TGTGTACGTTTGCTCATACACGCACATCCAAAAGCCTGTGCCTCATTCCTGGCCATGGGTGAGGACTTGGTCTGTCACGGCTGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp ATAATAAGACATAACTTGGCCGGTTGTGGGAGTCCTCATCAGCCGTaGCAGACCAAGTCCTCACCCATGGCCAGGAATGAGGCACAGGCT +
Preference number: 1 (lower is better)
Translates to: IIRHNLAGCGSPHQP*QTKSSPMARNEAQA
Trigger: AGCCTGTGCCTCATTCCTGGCCATGGGTGAGGACTTGGTCTGTCACGGCTGATGAGGACTCCCACAACCGGCCAAGTTATGTCTTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp AAGAAGGCATGTACGAGTGAGTGGGCTCATCGGTTGACCTCTGTGTaGGATGGCACGTGGTCCTACCCTGCAGAGTCAGAGCACAGAATT +
Preference number: 1 (lower is better)
Translates to: KKACTSEWAHRLTSV*DGTWSYPAESEHRI
Trigger: AATTCTGTGCTCTGACTCTGCAGGGTAGGACCACGTGCCATCTCACACAGAGGTCAACCGATGAGCCCACTCACTCGTACATGCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR GCA 90 bp TTTGCAAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTaGTCAAGCTGCACAACTTGGTCACGGAATTTGAGGGGAGAGGTG +
Preference number: 1 (lower is better)
Translates to: FASPHHPPIIPSFGI*SSCTTWSRNLRGEV
Trigger: CACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp AAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTaGATTTATCAAGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTA +
Preference number: 1 (lower is better)
Translates to: KNGSSRVRDDSTVGD*IYQACGEGLSLVEV
Trigger: TACCTCCACCAGGGAGAGTCCTTCTCCACAGGCTTGATAAATTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR GCA 90 bp CCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTaGACAACTTGGTCACGGAATTTGAGGGGAGAGGTGTTCTGGTTA +
Preference number: 1 (lower is better)
Translates to: PHHPPIIPSFGICSS*TTWSRNLRGEVFWL
Trigger: TAACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR GCA 90 bp AAGCAGGAGTCATGTCTGGCCATGTCTCACCTCCAAGCTTGTATTTaGAAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTG +
Preference number: 1 (lower is better)
Translates to: KQESCLAMSHLQACI*KPTPPTHNTLFRHL
Trigger: CAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTTGCAAATACAAGCTTGGAGGTGAGACATGGCCAGACATGACTCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp TACCCTGCAGAGTCAGAGCACAGAATTCCAAGTGTAGCACAGGTGTaGCAATTCAGAAGAGCAGCTGTCAACACATCTGAGGGCACAGAC +
Preference number: 1 (lower is better)
Translates to: YPAESEHRIPSVAQV*QFRRAAVNTSEGTD
Trigger: GTCTGTGCCCTCAGATGTGTTGACAGCTGCTCTTCTGAATTGCCACACCTGTGCTACACTTGGAATTCTGTGCTCTGACTCTGCAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp ATTGACAGGAACCTGCTCTTCAATCTTTCACCTCCCCTTTCTCCATaGAACGAACGTCAACATTCACACAGCAGCCCATCCCCAGCCTAC +
Preference number: 1 (lower is better)
Translates to: IDRNLLFNLSPPLSP*NERQHSHSSPSPAY
Trigger: GTAGGCTGGGGATGGGCTGCTGTGTGAATGTTGACGTTCGTTTCATGGAGAAAGGGGAGGTGAAAGATTGAAGAGCAGGTTCCTGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR GCA 90 bp TGGAGAAATGGGCATGTCAGTAGGATGAGGATGCCTAGTGGCAGGTaGAGGATGTCTGTGACTTTGTCGTGTGTGGGAGAAATGACCTTT +
Preference number: 1 (lower is better)
Translates to: WRNGHVSRMRMPSGR*RMSVTLSCVGEMTF
Trigger: AAAGGTCATTTCTCCCACACACGACAAAGTCACAGACATCCTGCACCTGCCACTAGGCATCCTCATCCTACTGACATGCCCATTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp CTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTaGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCT +
Preference number: 1 (lower is better)
Translates to: LWRRTLPGGGSGINM*SLILPSQTNKSCSA
Trigger: AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 90 bp CTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTaGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAAT +
Preference number: 1 (lower is better)
Translates to: LRVLCGCTRALAKER*QHATRVRTSALSLN
Trigger: ATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR TCA 90 bp GAGCAAACGTACACAGAAACCGCCACACCCACACCTCACATACCATaGCAGGGTGGAGTATTTGTTGTCCTTATGTTAACCTTGTCACCG +
Preference number: 1 (lower is better)
Translates to: EQTYTETATPTPHIP*QGGVFVVLMLTLSP
Trigger: CGGTGACAAGGTTAACATAAGGACAACAAATACTCCACCCTGTCATGGTATGTGAGGTGTGGGTGTGGCGGTTTCTGTGTACGTTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp TCTCAGACCAACAAGAGCTGTTCTGCTATCAATCAACCGAGAGATTaGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGATACTGAG +
Preference number: 1 (lower is better)
Translates to: SQTNKSCSAINQPRD*VTGTYPVFGTGDTE
Trigger: CTCAGTATCACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAACAGCTCTTGTTGGTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 90 bp CCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACAACTTaGTCACGGAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGT +
Preference number: 1 (lower is better)
Translates to: PPIIPSFGICSSCTT*SRNLRGEVFWLMMS
Trigger: ACTCATCATTAACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp ATAGCATGTGGAATCAGTCCTCCAGAAGGCAGCTTTCTCTCTTTCTaGGGGTGTATAATAAGACATAACTTGGCCGGTTGTGGGAGTCCT +
Preference number: 1 (lower is better)
Translates to: IACGISPPEGSFLSF*GCIIRHNLAGCGSP
Trigger: AGGACTCCCACAACCGGCCAAGTTATGTCTTATTATACACCCCCAGAAAGAGAGAAAGCTGCCTTCTGGAGGACTGATTCCACATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp GTACACAGAAACCGCCACACCCACACCTCACATACCATGACAGGGTaGAGTATTTGTTGTCCTTATGTTAACCTTGTCACCGTTTTCAGA +
Preference number: 1 (lower is better)
Translates to: VHRNRHTHTSHTMTG*SICCPYVNLVTVFR
Trigger: TCTGAAAACGGTGACAAGGTTAACATAAGGACAACAAATACTCCACCCTGTCATGGTATGTGAGGTGTGGGTGTGGCGGTTTCTGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp GGGTCCTTCCTTCTTAGCCTACACATACAACCAGGTGTCAAAGGATaGAAGGGTTCATCTCACACACTCACAGACCATGTAGACTATTCA +
Preference number: 1 (lower is better)
Translates to: GSFLLSLHIQPGVKG*KGSSHTLTDHVDYS
Trigger: TGAATAGTCTACATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTGTATGTGTAGGCTAAGAAGGAAGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp TGTCCTTATGTTAACCTTGTCACCGTTTTCAGAAATTCTGGGCTTTaGTGGTGCTGCGTCCATCAGGACACAGTCCAGAAATTCTCAGCA +
Preference number: 1 (lower is better)
Translates to: CPYVNLVTVFRNSGL*WCCVHQDTVQKFSA
Trigger: TGCTGAGAATTTCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAACGGTGACAAGGTTAACATAAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp CATGTAGACTATTCAATCTACACCTCCAGCTCGAACTCAGAACATTaGCAGGAACCTGCTCTTCAATCTTTCACCTCCCCTTTCTCCATG +
Preference number: 1 (lower is better)
Translates to: HVDYSIYTSSSNSEH*QEPALQSFTSPFSM
Trigger: CATGGAGAAAGGGGAGGTGAAAGATTGAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAATAGTCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp TGGGTTGAAATAGACACAGAAATCAACTCAGCTGAATATAGCATGTaGAATCAGTCCTCCAGAAGGCAGCTTTCTCTCTTTCTGGGGGTG +
Preference number: 1 (lower is better)
Translates to: WVEIDTEINSAEYSM*NQSSRRQLSLFLGV
Trigger: CACCCCCAGAAAGAGAGAAAGCTGCCTTCTGGAGGACTGATTCCACATGCTATATTCAGCTGAGTTGATTTCTGTGTCTATTTCAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 90 bp GAGGCTGAATTTGAGCCAGATCTATATGCTCCATCATCACTCTCCTaGGGAAAAGAGCCTAGATGTGTTCTATCTGCATTCCTGCTTAGA +
Preference number: 1 (lower is better)
Translates to: EAEFEPDLYAPSSLS*GKEPRCVLSAFLLR
Trigger: TCTAAGCAGGAATGCAGATAGAACACATCTAGGCTCTTTTCCCCAGGAGAGTGATGATGGAGCATATAGATCTGGCTCAAATTCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp GTTCAGAAAGTTAAAGTGATATCGCCAGGGTTCCTGACTGGTAAGTaGTGGAGGCTGAATTTGAGCCAGATCTATATGCTCCATCATCAC +
Preference number: 1 (lower is better)
Translates to: VQKVKVISPGFLTGK*WRLNLSQIYMLHHH
Trigger: GTGATGATGGAGCATATAGATCTGGCTCAAATTCAGCCTCCATCACTTACCAGTCAGGAACCCTGGCGATATCACTTTAACTTTCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 90 bp CCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATaGTCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTA +
Preference number: 1 (lower is better)
Translates to: PNTHTHTLLWRSPSE*STWELNGTTLNINV
Trigger: TACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 90 bp CCTCTTGTGGAGATCACCTTCAGAATGATCCACATGGGAACTCAATaGCACAACACTGAATATAAATGTATGCTTGGACTCAAATCTCTC +
Preference number: 1 (lower is better)
Translates to: PLVEITFRMIHMGTQ*HNTEYKCMLGLKSL
Trigger: GAGAGATTTGAGTCCAAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGATCTCCACAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAAGTCCTCATCAGCCGTaGCAGACCAAGTCCTCACCC +
Preference number: 2 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRSPHQP*QTKSSP
Trigger: GGGTGAGGACTTGGTCTGTCACGGCTGATGAGGACT...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR GCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGATTGGCAGGTGGCTTGTaGCCAGTGGCATCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRLAGGL*PVASRL
Trigger: TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAA...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp GAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTATCTGCCCCTCACATCTaGGCATCCTGGACTCCAAGC +
Preference number: 2 (lower is better)
Translates to: ERPLLYLAGGLCPVASRLSAPHI*ASWTPS
Trigger: GCTTGGAGTCCAGGATGCCCAGATGTGAGGGGCAGA...TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 90 bp ATCATGCCAGGCTGGGAGAGGCCACTCCTGTATTTGGCAGGTGGCTaGTGCCCAGTGGCATCAAGGCTATGGCAGGGTATAGCAGAGATC +
Preference number: 2 (lower is better)
Translates to: IMPGWERPLLYLAGG*CPVASRLWQGIAEI
Trigger: GATCTCTGCTATACCCTGCCATAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCCCAGCCTGGCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACATGTCAGCCCAGCCCTaGGGTCAGTGCAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHMSAQP*GQCRLR
Trigger: TCTCAGTCTGCACTGACCCCAGGGCTGGGCTGACAT...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCACCCTCCCATTCATCTTaGGCCCTGAGTTGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSPSHSS*ALSCVV
Trigger: CACCACGCAACTCAGGGCTCAAGATGAATGGGAGGG...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGAGATCACCTTCAGAATaGTCCACATGGGAACTCAAT +
Preference number: 2 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLRSPSE*STWELN
Trigger: ATTGAGTTCCCATGTGGATCATTCTGAAGGTGATCT...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAGGATCTGGCAAGGTATaGGCCAGTCTCCATCCACTG +
Preference number: 2 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSGSGKV*ASLHPL
Trigger: CAGTGGATGGAGACTGGCTCATACCTTGCCAGATCC...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCGGCCCCTCTTACCTCTaGTATTCTATTAAGACTGGC +
Preference number: 2 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPGPSYL*YSIKTG
Trigger: GCCAGTCTTAATAGAATATCAGAGGTAAGAGGGGCC...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACCTTGGTCACGGAATTTaGGGGGAGAGGTGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHLGHGI*GERCSG
Trigger: ACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAG...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCCCTCCCATTCATCTTaGGCCCTGAGTTGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: HTKHTHTHPLVEITFRMIPSHSS*ALSCVV
Trigger: CACCACGCAACTCAGGGCTCAAGATGAATGGGAGGG...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGGCCCATATTTCATGTaGCCCTGCATTTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: GRILSLGLVILRGQWVKRGPYFM*PCICWM
Trigger: CATCCAGCAAATGCAGGGTCACATGAAATATGGGCC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CCA 90 bp GAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTACGTTTTCAGAAATTCTaGGCTTTGATGGTGCTGCGT +
Preference number: 2 (lower is better)
Translates to: ERPLLYLAGGLCPVASRLRFQKF*ALMVLR
Trigger: ACGCAGCACCATCAAAGCCCAGAATTTCTGAAAACG...TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 90 bp ATTTGCAAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTaGCTCAAGCTGCACAACTTGGTCACGGAATTTGAGGGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: ICKPTPPTHNTLFRH*LKLHNLVTEFEGRG
Trigger: ACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp CAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGTAGAAGGCATGTACGAGTaGGTGGGCTCATCGGTTGAC +
Preference number: 2 (lower is better)
Translates to: QPGVKGWKGSSHTLTDHVEGMYE*VGSSVD
Trigger: GTCAACCGATGAGCCCACTCACTCGTACATGCCTTC...TACATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACCAGCTCTCACTAGGCTaGACTCTACCCAATGTAAGA +
Preference number: 2 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHQLSLG*TLPNVR
Trigger: TCTTACATTGGGTAGAGTCCAGCCTAGTGAGAGCTG...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp TTTTCAGAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAATTCATCTTGAGCCCTaGGTTGCGTGGTGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: FSEILGFDGAASIRTQSRIHLEP*VAWWQR
Trigger: CCTTTGCCACCACGCAACTCAGGGCTCAAGATGAAT...TCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCAGAGGATGTATTGTGTaGGTTTTCTATCACTGGAAC +
Preference number: 2 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPRGCIV*VFYHWN
Trigger: GTTCCAGTGATAGAAAACCCACACAATACATCCTCT...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 90 bp CCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACAACTaGGTCACGGAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAG +
Preference number: 2 (lower is better)
Translates to: PTHNTLFRHLLKLHN*VTEFEGRGVLVNDE
Trigger: CTCATCATTAACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 90 bp AGTAGGATGAGGATGCCTAGTGGCAGGTGCAGGATGTCTGTGACTTaGTCGTGTGTGGGAGAAATGACCTTTCTCAGGATGTGGGAATAT +
Preference number: 2 (lower is better)
Translates to: SRMRMPSGRCRMSVT*SCVGEMTFLRMWEY
Trigger: ATATTCCCACATCCTGAGAAAGGTCATTTCTCCCACACACGACAAAGTCACAGACATCCTGCACCTGCCACTAGGCATCCTCATCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGAGTCCATTGTCTCATTTaGCTTTTTGTCTCAGGCATG +
Preference number: 2 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGVHCLI*LFVSGM
Trigger: CATGCCTGAGACAAAAAGTCAAATGAGACAATGGAC...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGTCCATTGTCTCATTTaGCTTTTTGTCTCAGGCATG +
Preference number: 2 (lower is better)
Translates to: HATRVRTSALSLNGRLTRVHCLI*LFVSGM
Trigger: CATGCCTGAGACAAAAAGTCAAATGAGACAATGGAC...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp CAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGTAGGCCCATATTTCATGTaGCCCTGCATTTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: QPGVKGWKGSSHTLTDHVGPYFM*PCICWM
Trigger: CATCCAGCAAATGCAGGGTCACATGAAATATGGGCC...TACATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR GCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTATGCCTAGTGGCAGGTaGAGGATGTCTGTGACTTTG +
Preference number: 2 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIMPSGR*RMSVTL
Trigger: CAAAGTCACAGACATCCTGCACCTGCCACTAGGCAT...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCGCAAAGGCTCCCAAGTaGAGCATGTGTCTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: HTKHTHTHPLVEITFRMIAKAPK*SMCLFL
Trigger: CAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGC...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CCA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTTTTTTGTCTCAGGCATaGCCAGCCCCTTCACTCAGC +
Preference number: 2 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFFLSQA*PAPSLS
Trigger: GCTGAGTGAAGGGGCTGGCCATGCCTGAGACAAAAA...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGGATCTGGCAAGGTATaGGCCAGTCTCCATCCACTG +
Preference number: 2 (lower is better)
Translates to: INMWSLILPSQTNKSCSAGSGKV*ASLHPL
Trigger: CAGTGGATGGAGACTGGCTCATACCTTGCCAGATCC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR TCA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCCGACAGCACAGTTGGTaGTTGAATTTATCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSRQHSW*LNLSSL
Trigger: CAGGCTTGATAAATTCAATCACCAACTGTGCTGTCG...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp ACCCTACTCTTACCTCCCTCCCCATCAATTCAAGCTGAATTAAGAGAAATCCTAGGTGCAGGATGTCTGTaGCTTTGTCGTGTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: TLLLPPSPSIQAELREILGAGCL*LCRVWE
Trigger: CTCCCACACACGACAAAGTCACAGACATCCTGCACC...TAGGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR GCA 90 bp CGGATGTCCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTACAGGCTTTTGGATGTaGGTGTATGAGCAAACGTAC +
Preference number: 2 (lower is better)
Translates to: RMSSLGPLASLQNGNDQVTGFWM*VYEQTY
Trigger: GTACGTTTGCTCATACACGCACATCCAAAAGCCTGT...AACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGGACATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGAGTGGCATAAATATGTaGTCACTTATCCTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: HATRVRTSALSLNGRLTRSGINM*SLILPS
Trigger: AGAAGGCAGGATAAGTGACCACATATTTATGCCACT...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CCA 90 bp AGAGAAATCCTATGTGGATACACAGATACAATGACCTCAGCTCTGTCTAGCACCGATGTACAAGAGCACTaGCTAAGGAGAGGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: REILCGYTDTMTSALSSTDVQEH*LRRGGS
Trigger: GCTGCCACCTCTCCTTAGCCAGTGCTCTTGTACATC...GGTGCTAGACAGAGCTGAGGTCATTGTATCTGTGTATCCACATAGGATTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp CGGATGTCCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTAGCACAGTTGGTGATTaGATTTATCAAGCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: RMSSLGPLASLQNGNDQVSTVGD*IYQACG
Trigger: TCCACAGGCTTGATAAATTCAATCACCAACTGTGCT...AACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGGACATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTGGGGTCAGTGCAGACTaGGATACGGAGCAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSGVSAD*DTEQES
Trigger: GCTTTCCTGCTCCGTATCTCAGTCTGCACTGACCCC...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CCA 90 bp TACAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGAATTTATCAAGCCTGTaGAGAAGGACTCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: YNQVSKDGRVHLTHSQTMNLSSL*RRTLPG
Trigger: ACCAGGGAGAGTCCTTCTCCACAGGCTTGATAAATT...CATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 90 bp CCATGTAGACTATTCAATCTACACCTCCAGCTCGAACTCAGAACATaGACAGGAACCTGCTCTTCAATCTTTCACCTCCCCTTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: PCRLFNLHLQLELRT*TGTCSSIFHLPFLH
Trigger: ATGGAGAAAGGGGAGGTGAAAGATTGAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAATAGTCTACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCAATCAACCGAGAGATTaGGTTACAGGGACGTATCCT +
Preference number: 2 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFNQPRD*VTGTYP
Trigger: AGGATACGTCCCTGTAACCCAATCTCTCGGTTGATT...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR TCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGAGATCACCTTCAGAATaGTCCACATGGGAACTCAAT +
Preference number: 2 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWRSPSE*STWELN
Trigger: ATTGAGTTCCCATGTGGATCATTCTGAAGGTGATCT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CCA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCAGCAAAGGCTCCCAAGTaGAGCATGTGTCTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPAKAPK*SMCLFL
Trigger: CAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGC...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTAGTGGCATAAATATGTaGTCACTTATCCTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: AGYSRDLRPSGSRAVALISGINM*SLILPS
Trigger: AGAAGGCAGGATAAGTGACCACATATTTATGCCACT...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR GCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTCTGAATATAAATGTATaGTTGGACTCAAATCTCTCC +
Preference number: 2 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTLNINV*LDSNLS
Trigger: GGAGAGATTTGAGTCCAAGCATACATTTATATTCAG...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTCACATGGGAACTCAATaGCACAACACTGAATATAAA +
Preference number: 2 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIHMGTQ*HNTEYK
Trigger: TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTG...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTACTGAGAGAGGGATCTaGCAAGGTATGAGCCAGTCT +
Preference number: 2 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLTERGI*QGMSQS
Trigger: AGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGT...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CCA 90 bp AAGGGAAGGGAGTCTCAGATTAAGAAAACTGGAGAAATGGGCATGTCAGTAGGACATACCATGACAGGGTaGAGTATTTGTTGTCCTTAT +
Preference number: 2 (lower is better)
Translates to: KGRESQIKKTGEMGMSVGHTMTG*SICCPY
Trigger: ATAAGGACAACAAATACTCCACCCTGTCATGGTATG...TCCTACTGACATGCCCATTTCTCCAGTTTTCTTAATCTGAGACTCCCTTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 90 bp CTCTTCAAAATGGGAATGACCAAGTTTGGATTTATTATTCTATTCTaGAATCCCAAAGACCATCCTAAGAGCAAAATATGCTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: LFKMGMTKFGFIILF*NPKDHPKSKICSLK
Trigger: CTTCAAGGAGCATATTTTGCTCTTAGGATGGTCTTTGGGATTCAAGAATAGAATAATAAATCCAAACTTGGTCATTCCCATTTTGAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp GCCAGGCTGGGAGAGGCCACTCCTGTATTTGGCAGGTaGCTTGTGCCCAGTGGCATCAAGGCTATGGCAGGG +
Preference number: 3 (lower is better)
Translates to: ARLGEATPVFGR*LVPSGIKAMAG
Trigger: CCCTGCCATAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCCCAGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp TACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTaGAAGAAGGCATGTACGAGTGAGTGGGCTCATCGG +
Preference number: 3 (lower is better)
Translates to: YRAAPARSCFPL*KKACTSEWAHR
Trigger: CCGATGAGCCCACTCACTCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGAGCATGTGTCTCTTCTaGTTCAGCCAGGACAGGGTC +
Preference number: 3 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLSMCLF*FSQDRV
Trigger: GACCCTGTCCTGGCTGAACAAGAAGAGACACATGCT...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGCAATCAACCGAGAGATaGGGTTACAGGGACGTATCC +
Preference number: 3 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLQSTER*GYRDVS
Trigger: GGATACGTCCCTGTAACCCAATCTCTCGGTTGATTG...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR TCA 72 bp TGTACGAGTGAGTGGGCTCATCGGTTGACCTCTGTGTaGGATGGCACGTGGTCCTACCCTGCAGAGTCAGAG +
Preference number: 3 (lower is better)
Translates to: CTSEWAHRLTSV*DGTWSYPAESE
Trigger: CTCTGACTCTGCAGGGTAGGACCACGTGCCATCTCACACAGAGGTCAACCGATGAGCCCACTCACTCGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp GGAAGAAGGCATGTACGAGTGAGTGGGCTCATCGGTTaGCCTCTGTGTGAGATGGCACGTGGTCCTACCCTG +
Preference number: 3 (lower is better)
Translates to: GRRHVRVSGLIG*PLCEMARGPTL
Trigger: CAGGGTAGGACCACGTGCCATCTCACACAGAGGTCAACCGATGAGCCCACTCACTCGTACATGCCTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR GCA 72 bp TGGGAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTaGCCAGTGGCATCAAGGCTATGGCAGGGTATAGCA +
Preference number: 3 (lower is better)
Translates to: WERPLLYLAGGL*PVASRLWQGIA
Trigger: TGCTATACCCTGCCATAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACATCTTGAGCCCTGAGTaGCGTGGTGGCAAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHILSPE*RGGKGS
Trigger: GGAGCCTTTGCCACCACGCAACTCAGGGCTCAAGAT...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAGTCTCATTTGACTTTTaGTCTCAGGCATGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRVSFDF*SQAWPA
Trigger: GGCTGGCCATGCCTGAGACAAAAAGTCAAATGAGAC...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCATCTTGAGCCCTGAGTaGCGTGGTGGCAAAGGCTCC +
Preference number: 3 (lower is better)
Translates to: ERWQHATRVRTSALSLNGILSPE*RGGKGS
Trigger: GGAGCCTTTGCCACCACGCAACTCAGGGCTCAAGAT...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCCTCTTAGCCCAGGCCTaGTCCAGAAGGCTGGAACTG +
Preference number: 3 (lower is better)
Translates to: ERWQHATRVRTSALSLNGLLAQA*SRRLEL
Trigger: CAGTTCCAGCCTTCTGGACAAGGCCTGGGCTAAGAG...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGACTTAGGGTTGAGTCTTaGATGGTGACTATGGCTCCT +
Preference number: 3 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRLRVES*MVTMAP
Trigger: AGGAGCCATAGTCACCATCAAAGACTCAACCCTAAG...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp CCAGGAATGAGGCACAGGCTTTTGGATGTGCGTGTATaGGCAAACGTACACAGAAACCGCCACACCCACACC +
Preference number: 3 (lower is better)
Translates to: PGMRHRLLDVRV*ANVHRNRHTHT
Trigger: GGTGTGGGTGTGGCGGTTTCTGTGTACGTTTGCTCATACACGCACATCCAAAAGCCTGTGCCTCATTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp TGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATaGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: CNKGKNLSSFPK*QADPGLVTSLP
Trigger: GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR TCA 72 bp ATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAGTaGGTGGGCTCATCGGTTGACCTCTGTGTGAGATGG +
Preference number: 3 (lower is better)
Translates to: IMLPTVEEGMYE*VGSSVDLCVRW
Trigger: CCATCTCACACAGAGGTCAACCGATGAGCCCACTCACTCGTACATGCCTTCTTCCACAGTGGGAAGCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAAGCATGTGTCTCTTCTaGTTCAGCCAGGACAGGGTC +
Preference number: 3 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSSMCLF*FSQDRV
Trigger: GACCCTGTCCTGGCTGAACAAGAAGAGACACATGCT...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCGGACGTATCCTGTCTTaGGGACTGGTGATACTGAGA +
Preference number: 3 (lower is better)
Translates to: ERWQHATRVRTSALSLNGGRILS*GLVILR
Trigger: TCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTGGACGTATCCTGTCTTaGGGACTGGTGATACTGAGA +
Preference number: 3 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGGRILS*GLVILR
Trigger: TCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCACAATCAACCGAGAGATaGGGTTACAGGGACGTATCC +
Preference number: 3 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSQSTER*GYRDVS
Trigger: GGATACGTCCCTGTAACCCAATCTCTCGGTTGATTG...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCACTTGGTCACGGAATTaGAGGGGAGAGGTGTTCTGG +
Preference number: 3 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSTWSRN*RGEVFW
Trigger: CCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGT...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR GCA 72 bp CCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTaGACAACTTGGTCACGGAATTTGAGGGGAGAGGTG +
Preference number: 3 (lower is better)
Translates to: PPIIPSFGICSS*TTWSRNLRGEV
Trigger: CACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTCACACACACACCCTCTaGTGGAGATCACCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: SPLVHEITALHTDRRVLPHTHTL*WRSPSE
Trigger: TTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTG...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTGGCTGGGCTCCCATCTaGATGTCAGCCCAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLGWAPI*MSAQPW
Trigger: CCAGGGCTGGGCTGACATCAAGATGGGAGCCCAGCC...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp AGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTaGATTTATCAAGCCTGTGGAGAAGGACTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: SSRVRDDSTVGD*IYQACGEGLSL
Trigger: CAGGGAGAGTCCTTCTCCACAGGCTTGATAAATTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 72 bp GGCATGGCCAGCCCCTTCACTCAGCTCTCACTAGGCTaGACTCTACCCAATGTAAGAAAACATCTAACAAGA +
Preference number: 3 (lower is better)
Translates to: GMASPFTQLSLG*TLPNVRKHLTR
Trigger: TCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAGAGCTGAGTGAAGGGGCTGGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 72 bp AGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTaGTCACTTATCCTGCCTTCTCAGACCAACAAGAGC +
Preference number: 3 (lower is better)
Translates to: RTLPGGGSGINM*SLILPSQTNKS
Trigger: GCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCCTGGCAGAGGATGTATaGTGTGGGTTTTCTATCACT +
Preference number: 3 (lower is better)
Translates to: KRHLSSNIPFICPSHLGILAEDV*CGFSIT
Trigger: AGTGATAGAAAACCCACACAATACATCCTCTGCCAG...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp AACCTGCTCTTCAATCTTTCACCTCCCCTTTCTCCATaGAACGAACGTCAACATTCACACAGCAGCCCATCC +
Preference number: 3 (lower is better)
Translates to: NLLFNLSPPLSP*NERQHSHSSPS
Trigger: GGATGGGCTGCTGTGTGAATGTTGACGTTCGTTTCATGGAGAAAGGGGAGGTGAAAGATTGAAGAGCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp ATACCCTCTTTCGGCATTTGCTCAAGCTGCACAACTTaGTCACGGAATTTGAGGGGAGAGGTGTTCTGGTTA +
Preference number: 3 (lower is better)
Translates to: IPSFGICSSCTT*SRNLRGEVFWL
Trigger: TAACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp AACCGCCACACCCACACCTCACATACCATGACAGGGTaGAGTATTTGTTGTCCTTATGTTAACCTTGTCACC +
Preference number: 3 (lower is better)
Translates to: NRHTHTSHTMTG*SICCPYVNLVT
Trigger: GGTGACAAGGTTAACATAAGGACAACAAATACTCCACCCTGTCATGGTATGTGAGGTGTGGGTGTGGCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGTCTCATTTGACTTTTaGTCTCAGGCATGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWVSFDF*SQAWPA
Trigger: GGCTGGCCATGCCTGAGACAAAAAGTCAAATGAGAC...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCATCCCTCCCATTCATCTaGAGCCCTGAGTTGCGTGGT +
Preference number: 3 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPSLPFI*SPELRG
Trigger: ACCACGCAACTCAGGGCTCAAGATGAATGGGAGGGA...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGCGTCCATTGTCTCATTaGACTTTTTGTCTCAGGCAT +
Preference number: 3 (lower is better)
Translates to: SINREIGLQGRILSLGLVRPLSH*TFCLRH
Trigger: ATGCCTGAGACAAAAAGTCAAATGAGACAATGGACG...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGATCATTGACACGTCCATaGTCTCATTTGACTTTTTGT +
Preference number: 3 (lower is better)
Translates to: GRILSLGLVILRGQWVKRSLTRP*SHLTFC
Trigger: ACAAAAAGTCAAATGAGACAATGGACGTGTCAATGA...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR TCA 72 bp GTTAACCTTGTCACCGTTTTCAGAAATTCTGGGCTTTaGTGGTGCTGCGTCCATCAGGACACAGTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: VNLVTVFRNSGL*WCCVHQDTVQK
Trigger: TTTCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAACGGTGACAAGGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp TACACAGAAACCGCCACACCCACACCTCACATACCATaGCAGGGTGGAGTATTTGTTGTCCTTATGTTAACC +
Preference number: 3 (lower is better)
Translates to: YTETATPTPHIP*QGGVFVVLMLT
Trigger: GGTTAACATAAGGACAACAAATACTCCACCCTGTCATGGTATGTGAGGTGTGGGTGTGGCGGTTTCTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp AACAAGAGCTGTTCTGCTATCAATCAACCGAGAGATTaGGTTACAGGGACGTATCCTGTCTTTGGGACTGGT +
Preference number: 3 (lower is better)
Translates to: NKSCSAINQPRD*VTGTYPVFGTG
Trigger: ACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAACAGCTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 72 bp GGAATCAGTCCTCCAGAAGGCAGCTTTCTCTCTTTCTaGGGGTGTATAATAAGACATAACTTGGCCGGTTGT +
Preference number: 3 (lower is better)
Translates to: GISPPEGSFLSF*GCIIRHNLAGC
Trigger: ACAACCGGCCAAGTTATGTCTTATTATACACCCCCAGAAAGAGAGAAAGCTGCCTTCTGGAGGACTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCCTGAACAGTGACTCATaGTGTTATATCAATAGCTTC +
Preference number: 3 (lower is better)
Translates to: ERWQHATRVRTSALSLNGLNSDS*CYINSF
Trigger: GAAGCTATTGATATAACACAATGAGTCACTGTTCAG...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTTCATTGACACGTCCATaGTCTCATTTGACTTTTTGT +
Preference number: 3 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGSLTRP*SHLTFC
Trigger: ACAAAAAGTCAAATGAGACAATGGACGTGTCAATGA...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCGATCTGAAACGGTTCTaGGGTGTTTATAAAGCCCGT +
Preference number: 3 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFDLKRF*GVYKAR
Trigger: ACGGGCTTTATAAACACCCAAGAACCGTTTCAGATC...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTATAATAAGACATAACTaGGCCGGTTGTGGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFIIRHN*AGCGSP
Trigger: AGGACTCCCACAACCGGCCAAGTTATGTCTTATTAT...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp TATTCAATCTACACCTCCAGCTCGAACTCAGAACATTaGCAGGAACCTGCTCTTCAATCTTTCACCTCCCCT +
Preference number: 3 (lower is better)
Translates to: YSIYTSSSNSEH*QEPALQSFTSP
Trigger: AGGGGAGGTGAAAGATTGAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR TCA 72 bp GTTAAAGTGATATCGCCAGGGTTCCTGACTGGTAAGTaGTGGAGGCTGAATTTGAGCCAGATCTATATGCTC +
Preference number: 3 (lower is better)
Translates to: VKVISPGFLTGK*WRLNLSQIYML
Trigger: GAGCATATAGATCTGGCTCAAATTCAGCCTCCATCACTTACCAGTCAGGAACCCTGGCGATATCACTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp CTTCTTAGCCTACACATACAACCAGGTGTCAAAGGATaGAAGGGTTCATCTCACACACTCACAGACCATGTA +
Preference number: 3 (lower is better)
Translates to: LLSLHIQPGVKG*KGSSHTLTDHV
Trigger: TACATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTGTATGTGTAGGCTAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTAATATAAATGTATGCTaGGACTCAAATCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTNINVC*DSNLSL
Trigger: GAGGGAGAGATTTGAGTCCAAGCATACATTTATATT...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGAATATAAATGTATGCTaGGACTCAAATCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: SINREIGLQGRILSLGLVNINVC*DSNLSL
Trigger: GAGGGAGAGATTTGAGTCCAAGCATACATTTATATT...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR-3UTR CAA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCCGTCCATTGTCTCATTaGACTTTTTGTCTCAGGCAT +
Preference number: 3 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFRPLSH*TFCLRH
Trigger: ATGCCTGAGACAAAAAGTCAAATGAGACAATGGACG...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CCA 72 bp TTTGAGCCAGATCTATATGCTCCATCATCACTCTCCTaGGGAAAAGAGCCTAGATGTGTTCTATCTGCATTC +
Preference number: 3 (lower is better)
Translates to: FEPDLYAPSSLS*GKEPRCVLSAF
Trigger: GAATGCAGATAGAACACATCTAGGCTCTTTTCCCCAGGAGAGTGATGATGGAGCATATAGATCTGGCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTCACACACACACCCTCTaGTGGAGATCACCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKIHTHTL*WRSPSE
Trigger: TTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTG...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CCA 72 bp ACAACTTGGTCACGGAATTTGAGGGGAGAGGTGTTCTaGTTAATGATGAGTTACCATATAGCTATCTTCCAA +
Preference number: 3 (lower is better)
Translates to: TTWSRNLRGEVF*LMMSYHIAIFQ
Trigger: TTGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR-3UTR CAA 90 bp AGAGAAATCCTATGTGGATACACAGATACAATGACCTCAGCTCTGTCTAGCACCGTCCTTATGTTAACCTaGTCACCGTTTTCAGAAATT +
Preference number: 3 (lower is better)
Translates to: REILCGYTDTMTSALSSTVLMLT*SPFSEI
Trigger: AATTTCTGAAAACGGTGACAAGGTTAACATAAGGAC...GGTGCTAGACAGAGCTGAGGTCATTGTATCTGTGTATCCACATAGGATTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GGAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTGTGGCCCTGCTGTCCTaGCCCCTCGGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GEATPVFGRWLVPSGIKAVALLS*PLGQAG
Trigger: GCCAGCCTGCCCGAGGGGCCAGGACAGCAGGGCCAC...AGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp GGAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTCTGGGGGCTGGCAGGTaGCTGCCTGGGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GEATPVFGRWLVPSGIKALGAGR*LPGLAA
Trigger: AGCAGCCAACCCAGGCAGGCACCTGCCAGCCCCCAG...AGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCTGGGGTGTGTGGCCCTaGTGTCCTGGCCCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPWGVWP*CPGPSG
Trigger: GCCCGAGGGGCCAGGACAGCAGGGCCACACACCCCA...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGCAAAATCTTTCCCCGTaGCCAGGGAGGCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLQNLSP*PGRPGG
Trigger: CCCGCCCGGCCTCCCTGGGCACGGGGAAAGATTTTG...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCACGGGTCACGGGTTCTaGGCCAGTCCCCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPTGHGF*ASPRWP
Trigger: TGGCCAGCGGGGACTGGCTCAGAACCCGTGACCCGT...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCGCTGGAGCTGCAGGCTaGGCCAGACCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPAGAAG*ARPGAG
Trigger: CCCAGCTCCAGGTCTGGCTCAGCCTGCAGCTCCAGC...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGCTGGCTTCCCTACACTaGTCTGGCTGGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLLASLH*SGWVSR
Trigger: CCGGGACACCCAGCCAGAGCAGTGTAGGGAAGCCAG...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGCTTCTGGCGGAGGGATaGGCACCACGTCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLLLAEG*APRPSQ
Trigger: TTGACTTGGACGTGGTGCTCATCCCTCCGCCAGAAG...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAGCTGGAGCTGCAGGCTaGGCCAGACCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPAGAAG*ARPGAG
Trigger: CCCAGCTCCAGGTCTGGCTCAGCCTGCAGCTCCAGC...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGCTGGGCTCCCATCTTaGTGTCAGCCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGKGSQVEHVSLLVQPGQAGLPS*CQPSPG
Trigger: CCCAGGGCTGGGCTGACATCAAGATGGGAGCCCAGC...CTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGGCCCCTCGGGCAGGCTaGCTTCCCTACACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRAPRAG*LPYTAL
Trigger: CAGAGCAGTGTAGGGAAGCCAGCCTGCCCGAGGGGC...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACGCTGGAGCCGGAGCTTaGGCCAGAGCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHAGAGA*ARAFPA
Trigger: TGCTGGGAAGGCTCTGGCTCAAGCTCCGGCTCCAGC...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGCTGGAGCCGGAGCTTaGGCCAGAGCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRAGAGA*ARAFPA
Trigger: TGCTGGGAAGGCTCTGGCTCAAGCTCCGGCTCCAGC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGCTCAGTCCCACGCCTaGGCGCTCCAGAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GGKGSQVEHVSLLVQPGQAQSHA*ALQSVG
Trigger: TCCAACACTCTGGAGCGCTCAGGCGTGGGACTGAGC...CTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCCCCGGGGAGTGGGTTaGGTTATGGGCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTPRGVG*VMGSAR
Trigger: CCGAGCACTGCCCATAACCCAACCCACTCCCCGGGG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGCCCCTCGGGCAGGCTaGCTTCCCTACACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRAPRAG*LPYTAL
Trigger: CAGAGCAGTGTAGGGAAGCCAGCCTGCCCGAGGGGC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGGCTGGGGACAGATGCTaGGCCCGTGTCTCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRAGDRC*ARVSLG
Trigger: ACCCAAGGAGACACGGGCCCAGCATCTGTCCCCAGC...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGATCTGCCCCTCACATCTaGGCATCCTGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRSAPHI*ASWTPS
Trigger: GCTTGGAGTCCAGGATGCCCAGATGTGAGGGGCAGA...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAAGCAGGAATAGCTGCTaGGGCCTGGGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPSRNSC*GLGWSC
Trigger: GCAGCTCCAGCCCAGGCCTCAGCAGCTATTCCTGCT...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAGCTCAGTCCCACGCCTaGGCGCTCCAGAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPAQSHA*ALQSVG
Trigger: TCCAACACTCTGGAGCGCTCAGGCGTGGGACTGAGC...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAACCCATGGCCAGGAATaGGGCACAGGCTTTTGGATG +
Preference number: 4 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRTHGQE*GTGFWM
Trigger: CATCCAAAAGCCTGTGCCTCATTCCTGGCCATGGGT...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTACGGTTGACCTCTGTGTaGGATGGCACGTGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: ERPLLYLAGGLCPVASRLRLTSV*DGTWSY
Trigger: GTAGGACCACGTGCCATCTCACACAGAGGTCAACCG...TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTACAAAATCTTTCCCCGTaGCCAGGGAGGCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLQNLSP*PGRPGG
Trigger: CCCGCCCGGCCTCCCTGGGCACGGGGAAAGATTTTG...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTCCCCGGGGAGTGGGTTaGGTTATGGGCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGPRGVG*VMGSAR
Trigger: CCGAGCACTGCCCATAACCCAACCCACTCCCCGGGG...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAAAGTGATGGTCTCCTCTaGACCTCCCCGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AGRTGVAESGTTAQLVIESDGLL*TSPGSG
Trigger: CCCACTCCCCGGGGAGGTCCAGAGGAGACCATCACT...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCTTCTTTCTCAGGCTCTaGCGCAAGCCTCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPFFLRL*RKPPRF
Trigger: GAACCGGGGAGGCTTGCGCCAGAGCCTGAGAAAGAA...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGGTCCCGGAAAGCTTCTaGCGGAGGGATGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRVPESF*RRDEHH
Trigger: GTGGTGCTCATCCCTCCGCCAGAAGCTTTCCGGGAC...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCTTCCCTACACTGCTCTaGCTGGGTGTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPFPTLL*LGVPES
Trigger: GCTTTCCGGGACACCCAGCCAGAGCAGTGTAGGGAA...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTATGCTGGGGGTCACTGTaGAAACTGCTTCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ERPLLYLAGGLCPVASRLCWGSL*KLLRLL
Trigger: GAGCAGCCGAAGCAGTTTCCACAGTGACCCCCAGCA...TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCGGGGCAGCCTCAGTGTaGCGGGACAGCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSGAASV*RDSQCW
Trigger: CCAGCACTGGCTGTCCCGCCACACTGAGGCTGCCCC...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGCTGGGGACAGATGCTaGGCCCGTGTCTCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRAGDRC*ARVSLG
Trigger: ACCCAAGGAGACACGGGCCCAGCATCTGTCCCCAGC...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGAAGCTGGACCTGGAGCTaGAGCCGGAGCTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGSWTWS*SRSLSQ
Trigger: CTGGCTCAAGCTCCGGCTCCAGCTCCAGGTCCAGCT...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGGGTAGGACAGGCGCTTaGAGCTCTGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRGRTGA*SSAPAP
Trigger: TGGAGCAGGAGCAGAGCTCCAAGCGCCTGTCCTACC...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGAGCTCTTTCCCTAAATaGCAGGCTGACCCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLSSFPK*QADPGL
Trigger: TAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCT...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 72 bp CCTATCATGCCAGGCTGGGAGAGGCCACTCCTGTATTaGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: PIMPGWERPLLY*AGGLCPVASRL
Trigger: TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCCCAGCCTGGCATGATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCTGGAGAGTCAGCCCTaGCTCTGGCTTCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTLESQP*LWLRWS
Trigger: ACTCCACCGAAGCCAGAGTCAGGGCTGACTCTCCAG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGCCCTCCCATTCATCTTaGGCCCTGAGTTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRPSHSS*ALSCVV
Trigger: CACCACGCAACTCAGGGCTCAAGATGAATGGGAGGG...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGTCAGGCCAGGGGTGTTaGTCTCCTGGAGAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRSGQGC*SPGESA
Trigger: GGCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGA...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCACTACAGGGCGGCCCCTaGCAGATCATGCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPLQGGP*QIMLPT
Trigger: AGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGTAG...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCGACCTCCCCGGGGAGTaGGTTGGGTTATGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGDLPGE*VGLWAV
Trigger: CACTGCCCATAACCCAACCCACTCCCCGGGGAGGTC...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGTGGCTTCTGGCAATGTaGATATTCCTAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLWLLAM*IFLGRL
Trigger: CAGCCTCCCTAGGAATATCCACATTGCCAGAAGCCA...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTCAAAGGTCCCTGAGCTaGACCTGGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGQRSLS*TWSWSR
Trigger: CCGGCTCCAGCTCCAGGTCCAGCTCAGGGACCTTTG...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAGATGTACAAGAGCACTaGCTAAGGAGAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRDVQEH*LRRGGS
Trigger: GCTGCCACCTCTCCTTAGCCAGTGCTCTTGTACATC...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCGGAAGCGAGGGGAAGTaGACAATGTCCCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: KRHLSSNIPFICPSHLGIGSEGK*TMSQAG
Trigger: CCCGGCTTGGGACATTGTTCACTTCCCCTCGCTTCC...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGCGTTCGTCCTTGCTaGGTGATGGTCTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRGVRPC*VMVSSG
Trigger: TCCAGAGGAGACCATCACTCAGCAAGGACGAACGCC...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGCTCAGGAGGGTGGGATaGGCTGGACTCAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRLRRVG*AGLSYC
Trigger: ACAGTAACTGAGTCCAGCTCATCCCACCCTCCTGAG...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGTGTCTCCTTGGGTCTaGTGGAGCTGGTGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRVSPWV*WSWWAY
Trigger: GTAAGCCCACCAGCTCCATCAGACCCAAGGAGACAC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGAGCAGGAATAGCTGCTaGGGCCTGGGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVSRNSC*GLGWSC
Trigger: GCAGCTCCAGCCCAGGCCTCAGCAGCTATTCCTGCT...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAGGGGTCAGTGCAGACTaGGATACGGAGCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPGVSAD*DTEQES
Trigger: GCTTTCCTGCTCCGTATCTCAGTCTGCACTGACCCC...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCTACAGCTTTGCACACTaGCAGGAGGGTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPYSFAH*QEGPSF
Trigger: GAAGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTA...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAAAGCGGGTGGAGGTGCTaGTCATCATGCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: AGRTGVAESGTTAQLVIESGWRC*SSCCHS
Trigger: GCTGTGACAGCATGATGAGCAGCACCTCCACCCGCT...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp CAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCACATCTGGGGGCTGGCAGGTaGCTGCCTGGGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QTHTHTPSCGDHLQNDPHLGAGR*LPGLAA
Trigger: AGCAGCCAACCCAGGCAGGCACCTGCCAGCCCCCAG...ATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGCTGGCTTCCCTACACTaGTCTGGCTGGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVLASLH*SGWVSR
Trigger: CCGGGACACCCAGCCAGAGCAGTGTAGGGAAGCCAG...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACCTTCCCCAGCAGCACTaGGTCAGAGCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHLPQQH*VRASLR
Trigger: CCTCAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAG...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp GAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTAGGAGAGGTGGCAGCATaGAACAAGGGTAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: ERPLLYLAGGLCPVASRLGEVAA*NKGKNL
Trigger: GAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCC...TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGAGGGCCTCCACTGGGTTaGGGGCTGAAGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGGPPLG*GLKREK
Trigger: CTTTTCTCTCTTCAGCCCCCAACCCAGTGGAGGCCC...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTAGTGATGGTCTCCTCTaGACCTCCCCGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTSDGLL*TSPGSG
Trigger: CCCACTCCCCGGGGAGGTCCAGAGGAGACCATCACT...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCTGAGGCCTAGGCCCTaGGGCTCAGGAGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: HTKHTHTHPLVEITFRMILRPRP*GSGGWD
Trigger: ATCCCACCCTCCTGAGCCCCAGGGCCTAGGCCTCAG...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGTGGCCCTGCTGTCCTaGCCCCTCGGGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSAVALLS*PLGQAG
Trigger: GCCAGCCTGCCCGAGGGGCCAGGACAGCAGGGCCAC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCGATGGTGTGTGGAGCTaGGGTGTGTGGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGDGVWS*GVWPCC
Trigger: ACAGCAGGGCCACACACCCCAGCTCCACACACCATC...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTCGGGACAGCCAGTGCTaGGGGTCACTGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGRDSQC*GSLWKL
Trigger: CAGTTTCCACAGTGACCCCCAGCACTGGCTGTCCCG...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCAGCCAGACCTGGAGCTaGGGACAGATGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HTKHTHTHPLVEITFRMISQTWS*GQMLGP
Trigger: CGGGCCCAGCATCTGTCCCCAGCTCCAGGTCTGGCT...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCAGCTGGACCTGGAGCTaGAGCCGGAGCTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSSWTWS*SRSLSQ
Trigger: CTGGCTCAAGCTCCGGCTCCAGCTCCAGGTCCAGCT...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCGGTAGGACAGGCGCTTaGAGCTCTGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGGRTGA*SSAPAP
Trigger: TGGAGCAGGAGCAGAGCTCCAAGCGCCTGTCCTACC...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 72 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTaGTTCAGCCAGGACAGGGTCTGTACTGGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLF*FSQDRVCTGRR
Trigger: TCTGCGACCAGTACAGACCCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGTCAGCTCTTGCATTCTaGGGCAACCCTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRSALAF*GNPAGG
Trigger: TCCTCCTGCAGGGTTGCCTCAGAATGCAAGAGCTGA...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAGTGTCTCCTTGGGTCTaGTGGAGCTGGTGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSVSPWV*WSWWAY
Trigger: GTAAGCCCACCAGCTCCATCAGACCCAAGGAGACAC...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAAGGATCTGGCAAGGTATaGGCCAGTCTCCATCCACTG +
Preference number: 4 (lower is better)
Translates to: AGRTGVAESGTTAQLVIEGSGKV*ASLHPL
Trigger: CAGTGGATGGAGACTGGCTCATACCTTGCCAGATCC...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCGGCACTTTGAGATCTTaGAGGGCCTTAGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPGTLRS*RALGLS
Trigger: ACTCAACCCTAAGGCCCTTCAAGATCTCAAAGTGCC...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAGTCCTCATCAGCCGTaGCAGACCAAGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLSPHQP*QTKSSP
Trigger: GGGTGAGGACTTGGTCTGTCACGGCTGATGAGGACT...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACGGTGCAGGATGTCTGTaGCTTTGTCGTGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHGAGCL*LCRVWE
Trigger: CTCCCACACACGACAAAGTCACAGACATCCTGCACC...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGTCAGGCCAGGGGTGTTaGTCTCCTGGAGAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVSGQGC*SPGESA
Trigger: GGCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGA...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCAGTTGAAAGGTAGCTaGTCAGTCCCACGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTQLKGS*SVPRLS
Trigger: GCTCAGGCGTGGGACTGAGCAGCTACCTTTCAACTG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGGGAGAGGTGGCAGCATaGAACAAGGGTAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRGEVAA*NKGKNL
Trigger: GAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCC...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGATTGGCAGGTGGCTTGTaGCCAGTGGCATCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGLAGGL*PVASRL
Trigger: TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAA...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCACTCCTTCTCTTCAGTaGACAGGAAGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPTPSLQ*TGSRSC
Trigger: GCAGCTACGACTTCCTGTCCACTGAAGAGAAGGAGT...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCCTGAGGCCTAGGCCCTaGGGCTCAGGAGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFLRPRP*GSGGWD
Trigger: ATCCCACCCTCCTGAGCCCCAGGGCCTAGGCCTCAG...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTTTCTTTCTCAGGCTCTaGCGCAAGCCTCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGFFLRL*RKPPRF
Trigger: GAACCGGGGAGGCTTGCGCCAGAGCCTGAGAAAGAA...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACCTACACTGCTCTGGCTaGGTGTCCCGGAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHLHCSG*VSRKAS
Trigger: AGAAGCTTTCCGGGACACCCAGCCAGAGCAGTGTAG...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTACTCTTTCCTGGGAGCTaGATGGTGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLLFPGS*MVCGAG
Trigger: CCCAGCTCCACACACCATCCAGCTCCCAGGAAAGAG...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTACCTGCAGGAGGAGGCTaGGGTTGTGTGTACCTGGTT +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLPAGGG*GCVYLV
Trigger: AACCAGGTACACACAACCCCAGCCTCCTCCTGCAGG...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAAACATTGCCTGGAGCTaGAGACTTCATTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRNIAWS*RLHWQR
Trigger: CCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTT...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGTGCTGGTTTTGGGGCTaGCATCTTTCTCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLCWFWG*HLSQLK
Trigger: TTTCAACTGAGAAAGATGCCAGCCCCAAAACCAGCA...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCATTGGGGACACCCTTTaGGGAGATCTTGACACTGAC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPIGDTL*GDLDTD
Trigger: GTCAGTGTCAAGATCTCCCCAAAGGGTGTCCCCAAT...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GACCCGGGGTTAGTCACTTCCCTTCCCCAGCAGCACTGCGTCAGAGCTTCTCTGAATCAACCGAGAGATTaGGTTACAGGGACGTATCCT +
Preference number: 4 (lower is better)
Translates to: DPGLVTSLPQQHCVRASLNQPRD*VTGTYP
Trigger: AGGATACGTCCCTGTAACCCAATCTCTCGGTTGATT...CAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAGGGAAGTGACTAACCCCGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCATGTCAGCCCAGCCCTaGGGTCAGTGCAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: KRHLSSNIPFICPSHLGIMSAQP*GQCRLR
Trigger: TCTCAGTCTGCACTGACCCCAGGGCTGGGCTGACAT...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAGTGGCTTGTGCCCAGTaGCATCAAGGCTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSVACAQ*HQGYGR
Trigger: CCTGCCATAGCCTTGATGCCACTGGGCACAAGCCAC...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp GAAGAGATAACGAATCAGCTCCTCTTAGCCCAGGCCTaGTCCAGAAGGCTGGAACTGAGAGAGGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: EEITNQLLLAQA*SRRLELREGSG
Trigger: GCCAGATCCCTCTCTCAGTTCCAGCCTTCTGGACAAGGCCTGGGCTAAGAGGAGCTGATTCGTTATCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAAATTCTAGCCTCCGTGTCCAGTaGGCCAATGGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EILGFDGAASIRTQSRNSSLRVQ*ANGLLQ
Trigger: CTGGAGGAGACCATTGGCTCACTGGACACGGAGGCT...AGAATTTCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAGGGTGGTGCTTTTCCTaGAGTTCTGGCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPGWCFS*SSGFWQ
Trigger: TTGCCAGAAGCCAGAACTTCAGGAAAAGCACCACCC...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTGTTGGCTGCTCTGGCTaGCCTGTTCTTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGVGCSG*PVLSQA
Trigger: AGCCTGAGAAAGAACAGGTCAGCCAGAGCAGCCAAC...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGGGCCCATATTTCATGTaGCCCTGCATTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRGPYFM*PCICWM
Trigger: CATCCAGCAAATGCAGGGTCACATGAAATATGGGCC...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCGGGGTCAGTGCAGACTaGGATACGGAGCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSGVSAD*DTEQES
Trigger: GCTTTCCTGCTCCGTATCTCAGTCTGCACTGACCCC...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCTTGGTCACGGAATTTaGGGGGAGAGGTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTLGHGI*GERCSG
Trigger: ACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACATGCTCCTTGAAGGATaGGGATGTGGAGAAGCACGG +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHMLLEG*GCGEAR
Trigger: CCGTGCTTCTCCACATCCTCATCCTTCAAGGAGCAT...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGGATGGAGACAGAGGCTaGTTCCCCTGCCTCCTACTG +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVDGDRG*FPCLLL
Trigger: CAGTAGGAGGCAGGGGAAGCAGCCTCTGTCTCCATC...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCCAGTTGAAAGGTAGCTaGTCAGTCCCACGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGQLKGS*SVPRLS
Trigger: GCTCAGGCGTGGGACTGAGCAGCTACCTTTCAACTG...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCGAGTGGGTTGGGTTATaGGCAGTGCTCGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGEWVGL*AVLGNL
Trigger: GAGGTTTCCGAGCACTGCCCATAACCCAACCCACTC...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTGACCTCCCCGGGGAGTaGGTTGGGTTATGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFDLPGE*VGLWAV
Trigger: CACTGCCCATAACCCAACCCACTCCCCGGGGAGGTC...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGAGGGTGGGATGAGCTaGACTCAGTTACTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTEGGMS*TQLLSL
Trigger: CAAGGACAGTAACTGAGTCCAGCTCATCCCACCCTC...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGCTGGGTTGGCTGCTCTaGCTGACCTGTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRLGWLL*LTCSFS
Trigger: TGAGAAAGAACAGGTCAGCCAGAGCAGCCAACCCAG...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAGTCTGCTCTCTTTCCTaGGAGCTGGATGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSVCSLS*ELDGVW
Trigger: CCACACACCATCCAGCTCCCAGGAAAGAGAGCAGAC...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTCCTGCAGGAGGAGGCTaGGGTTGTGTGTACCTGGTT +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTPAGGG*GCVYLV
Trigger: AACCAGGTACACACAACCCCAGCCTCCTCCTGCAGG...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGGGGGTGTTGCTCTCCTaGAGAGTCAGCCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVGVLLS*RVSPDS
Trigger: AGAGTCAGGGCTGACTCTCCAGGAGAGCAACACCCC...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGTTCCCAGAGAAGTGCTaGTTTTGGGGCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRFPEKC*FWGWHL
Trigger: AAGATGCCAGCCCCAAAACCAGCACTTCTCTGGGAA...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGACAGGGTCTGTACTaGTCGCAGAGTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRGQGLY*SQSLLL
Trigger: AAGGAGTAGACTCTGCGACCAGTACAGACCCTGTCC...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAAATTTATCAAGCCTGTaGAGAAGGACTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRNLSSL*RRTLPG
Trigger: ACCAGGGAGAGTCCTTCTCCACAGGCTTGATAAATT...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGATAAAGCCCGTGGGCTaGGCTCCCATCTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRIKPVG*APILMS
Trigger: TGACATCAAGATGGGAGCCCAGCCCACGGGCTTTAT...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTCCAAGTCCTCACCCATaGCCAGGAATGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTPSPHP*PGMRHR
Trigger: CCTGTGCCTCATTCCTGGCCATGGGTGAGGACTTGG...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp AACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTaGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NREIGLQGRILS*GLVILRGQWVK
Trigger: CTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTTTCGTCCTTGCTGAGTaGTGGTCTCCTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: SPLVHEITALHTDRRVLPFVLAE*WSPLDL
Trigger: GAGGTCCAGAGGAGACCATCACTCAGCAAGGACGAA...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGGCGTTCGTCCTTGCTaGGTGATGGTCTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIGVRPC*VMVSSG
Trigger: TCCAGAGGAGACCATCACTCAGCAAGGACGAACGCC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGATTGGGACATGGCTTCTaGAGGAGTCTGCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRLGHGF*RSLLSF
Trigger: GAAAGAGAGCAGACTCCTTCAGAAGCCATGTCCCAA...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAATTGGGACATGGCTTCTaGAGGAGTCTGCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AGRTGVAESGTTAQLVIELGHGF*RSLLSF
Trigger: GAAAGAGAGCAGACTCCTTCAGAAGCCATGTCCCAA...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTGGATCTGGCAAGGTATaGGCCAGTCTCCATCCACTG +
Preference number: 4 (lower is better)
Translates to: SPLVHEITALHTDRRVLPGSGKV*ASLHPL
Trigger: CAGTGGATGGAGACTGGCTCATACCTTGCCAGATCC...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACAGAAATTCTGGGCTTTaGTGGTGCTGCGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHRNSGL*WCCVHQ
Trigger: CTGATGGACGCAGCACCATCAAAGCCCAGAATTTCT...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CGGATGTCCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTCTAATCACACTTGTGTaGTGCCAGGGCCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RMSSLGPLASLQNGNDQVLITLV*CQGPRF
Trigger: GAACCTGGGGCCCTGGCATCACACAAGTGTGATTAG...AACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGGACATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTGGCATGTCAGTAGGATaGGGATGCCTAGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTGMSVG*GCLVAG
Trigger: ACCTGCCACTAGGCATCCTCATCCTACTGACATGCC...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTTATCGCCAGGGTTCCTaGCTGGTAAGTGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTYRQGS*LVSDGG
Trigger: GCCTCCATCACTTACCAGTCAGGAACCCTGGCGATA...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp TACAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGTCATGCTGTCACAGCTaGCGACACGGGTCACGGGTT +
Preference number: 4 (lower is better)
Translates to: YNQVSKDGRVHLTHSQTMSCCHS*RHGSRV
Trigger: AACCCGTGACCCGTGTCGGCAGCTGTGACAGCATGA...CATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTAGGTGCTGCTCATCATaGTGTCACAGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTRCCSS*CHSCRH
Trigger: GTGTCGGCAGCTGTGACAGCATGATGAGCAGCACCT...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCTTGGGTTATGGGCAGTaGTCGGAAACCTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGLGYGQ*SETSGS
Trigger: ACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAA...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCATTGGGTTATGGGCAGTaGTCGGAAACCTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSLGYGQ*SETSGS
Trigger: ACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAA...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTTGGGGTGTGTGGCCCTaGTGTCCTGGCCCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSWGVWP*CPGPSG
Trigger: GCCCGAGGGGCCAGGACAGCAGGGCCACACACCCCA...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGGTCACTGTGGAAACTaGTTCGGCTGCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRGHCGN*FGCSSE
Trigger: TTCTGAAGAGCAGCCGAAGCAGTTTCCACAGTGACC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGCATAGATTTGCTAGCTaGAACATTGCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRHRFAS*NIAWSW
Trigger: CCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATG...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGCTCAGACTCGTCAGTaGACAGTCCGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIAQTRQ*TVRCQP
Trigger: AGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTTCTGGGAGTTGTGGCTaGCTCAGACTCGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTSGSCG*LRLVSG
Trigger: TCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGA...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCGAGTGGGTTGGGTTATaGGCAGTGCTCGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSEWVGL*AVLGNL
Trigger: GAGGTTTCCGAGCACTGCCCATAACCCAACCCACTC...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GGAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTCTTTTCCTGAAGTTCTaGCTTCTGGCAATGTGGATA +
Preference number: 4 (lower is better)
Translates to: GEATPVFGRWLVPSGIKALFLKF*LLAMWI
Trigger: TATCCACATTGCCAGAAGCCAGAACTTCAGGAAAAG...AGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTCTACACTGCTCTGGCTaGGTGTCCCGGAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTLHCSG*VSRKAS
Trigger: AGAAGCTTTCCGGGACACCCAGCCAGAGCAGTGTAG...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTGATGGTGTGTGGAGCTaGGGTGTGTGGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFDGVWS*GVWPCC
Trigger: ACAGCAGGGCCACACACCCCAGCTCCACACACCATC...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGACAGAACAATATTAGGTaGCAGCTTCCGGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGQNNIR*QLPGLR
Trigger: CCTAAGCCCCGGAAGCTGCCACCTAATATTGTTCTG...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCACATCGGGACAGCCAGTGCTaGGGGTCACTGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: QTHTHTPSCGDHLQNDPHRDSQC*GSLWKL
Trigger: CAGTTTCCACAGTGACCCCCAGCACTGGCTGTCCCG...ATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTAGCCAGACCTGGAGCTaGGGACAGATGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSASQTWS*GQMLGP
Trigger: CGGGCCCAGCATCTGTCCCCAGCTCCAGGTCTGGCT...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGAGGCTGAGCCAGACCTaGAGCTGGGGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWRLSQT*SWGQML
Trigger: CAGCATCTGTCCCCAGCTCCAGGTCTGGCTCAGCCT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGCCCACACCACCCACCCATAATACCCTCTTTCGGCATTTGCTCAAGCTGCACAGCTGCAACATTGCCTaGAGCTGGAGACTTCATTGG +
Preference number: 4 (lower is better)
Translates to: KPTPPTHNTLFRHLLKLHSCNIA*SWRLHW
Trigger: CCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCT...GTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGGGGTGTTGCTCTCCTaGAGAGTCAGCCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIGVLLS*RVSPDS
Trigger: AGAGTCAGGGCTGACTCTCCAGGAGAGCAACACCCC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTACCCTTCTGTGTTCATTaGGGACACCCTTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLPFCVH*GHPLGR
Trigger: TCTCCCCAAAGGGTGTCCCCAATGAACACAGAAGGG...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTTTTTTGTCTCAGGCATaGCCAGCCCCTTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGFLSQA*PAPSLS
Trigger: GCTGAGTGAAGGGGCTGGCCATGCCTGAGACAAAAA...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTACTGAGAGAGGGATCTaGCAAGGTATGAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTTERGI*QGMSQS
Trigger: AGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGT...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTACTGGCTAAGGAGAGGTaGCAGCATGCAACAAGGGTA +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLLAKER*QHATRV
Trigger: TACCCTTGTTGCATGCTGCCACCTCTCCTTAGCCAG...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGATTGGCAAAGGTCCCTaGGCTGGACCTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWIGKGP*AGPGAG
Trigger: TCCAGCTCCAGGTCCAGCTCAGGGACCTTTGCCAAT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGAGCACAGAGAAGATCTaGAACGGTTCTTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: GGKGSQVEHVSLLVQPGQSTEKI*NGSWVF
Trigger: AAACACCCAAGAACCGTTTCAGATCTTCTCTGTGCT...CTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGTCGAACTCAGAACATTaGCAGGAACCTGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRSNSEH*QEPALQ
Trigger: TTGAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGA...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTTTCCTGACTGGTAAGTaGTGGAGGCTGAATTTGAGC +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTFLTGK*WRLNLS
Trigger: GCTCAAATTCAGCCTCCATCACTTACCAGTCAGGAA...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCGATGGAGACAGAGGCTaGTTCCCCTGCCTCCTACTG +
Preference number: 4 (lower is better)
Translates to: TVTHCVISIASVMYPAAPDGDRG*FPCLLL
Trigger: CAGTAGGAGGCAGGGGAAGCAGCCTCTGTCTCCATC...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGGCTTCTGAAGGAGTCTaGTCTCTTTCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVASEGV*SLSWEL
Trigger: CAGCTCCCAGGAAAGAGAGCAGACTCCTTCAGAAGC...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAGCATCTTCAGCTCTTaGATTCTGAGGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLSIFSS*ILRQPC
Trigger: GCAGGGTTGCCTCAGAATGCAAGAGCTGAAGATGCT...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAGCTTTTCTCTGCTCTTaGAGTGAACAGGAGATCAGG +
Preference number: 4 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPAFLCS*SEQEIR
Trigger: CCTGATCTCCTGTTCACTGCAAGAGCAGAGAAAAGC...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGGAGCTGGGGACAGATaGTGGGCCCGTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSAGAGDR*WARVSL
Trigger: CAAGGAGACACGGGCCCAGCATCTGTCCCCAGCTCC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp TTTTCAGAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGACCAGGTCAGCCAGCTTaGCTACCTGGATACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FSEILGFDGAASIRTQSRPGQPA*LPGYLQ
Trigger: TTGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGG...TCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCCTTCCCCAGCAGCACTaGGTCAGAGCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: TVTHCVISIASVMYPAAPLPQQH*VRASLR
Trigger: CCTCAGAGAAGCTCTGACGCAGTGCTGCTGGGGAAG...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTAACAAGGTGCAGGGATaGCAAAGGGGGCTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SPLVHEITALHTDRRVLPNKVQG*QRGLLE
Trigger: CTCTAGAAGCCCCCTTTGCCATCCCTGCACCTTGTT...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGATGGCTTTTTGGGACATaGCTTCTGAAGGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRWLFGT*LLKESA
Trigger: AGCAGACTCCTTCAGAAGCCATGTCCCAAAAAGCCA...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCCAGAACAATATTAGGTaGCAGCTTCCGGGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: KRHLSSNIPFICPSHLGIQNNIR*QLPGLR
Trigger: CCTAAGCCCCGGAAGCTGCCACCTAATATTGTTCTG...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGTGCTGGGGGTCACTGTaGAAACTGCTTCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWCWGSL*KLLRLL
Trigger: GAGCAGCCGAAGCAGTTTCCACAGTGACCCCCAGCA...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTGGGGCAGCCTCAGTGTaGCGGGACAGCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSGAASV*RDSQCW
Trigger: CCAGCACTGGCTGTCCCGCCACACTGAGGCTGCCCC...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAGGCACTGTTTGCCCTTaGGGCCTTAGGGATAGAAAT +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSGTVCP*GLRDRN
Trigger: ATTTCTATCCCTAAGGCCCCAAGGGCAAACAGTGCC...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCTTCCCAGAGAAGTGCTaGTTTTGGGGCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGFPEKC*FWGWHL
Trigger: AAGATGCCAGCCCCAAAACCAGCACTTCTCTGGGAA...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGCCAGCTTGCCTACCTaGATACCTGCAAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRASLPT*IPAKSF
Trigger: GAAAGATTTTGCAGGTATCCAGGTAGGCAAGCTGGC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTGGACAGGGTCTGTACTaGTCGCAGAGTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: SPLVHEITALHTDRRVLPGQGLY*SQSLLL
Trigger: AAGGAGTAGACTCTGCGACCAGTACAGACCCTGTCC...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAGCAAAGGCTCCCAAGTaGAGCATGTGTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLAKAPK*SMCLFL
Trigger: CAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGC...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGAATTTATCAAGCCTGTaGAGAAGGACTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRNLSSL*RRTLPG
Trigger: ACCAGGGAGAGTCCTTCTCCACAGGCTTGATAAATT...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGATGTCAGCCCAGCCCTaGGGTCAGTGCAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWMSAQP*GQCRLR
Trigger: TCTCAGTCTGCACTGACCCCAGGGCTGGGCTGACAT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGGATGTACAAGAGCACTaGCTAAGGAGAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVDVQEH*LRRGGS
Trigger: GCTGCCACCTCTCCTTAGCCAGTGCTCTTGTACATC...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTAGTGTAGCACAGGTGTaGCAATTCAGAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTSVAQV*QFRRAA
Trigger: AGCTGCTCTTCTGAATTGCCACACCTGTGCTACACT...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCCATCATCACTCTCCTaGGGAAAAGAGCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTPSSLS*GKEPRC
Trigger: ACATCTAGGCTCTTTTCCCCAGGAGAGTGATGATGG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp TACCTGCATCAGCACAGAGAAGATCTGAAACGGTTCTaGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: YLHQHREDLKRF*GVYKARGLGSH
Trigger: ATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAACCGTTTCAGATCTTCTCTGTGCTGATGCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 72 bp CCCACACCACCCACCCATAATACCCTCTTTCGGCATTaGCTCAAGCTGCACAACTTGGTCACGGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: PTPPTHNTLFRH*LKLHNLVTEFE
Trigger: CTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGTATTATGGGTGGGTGGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp AGGATGCCTAGTGGCAGGTGCAGGATGTCTGTGACTTaGTCGTGTGTGGGAGAAATGACCTTTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RMPSGRCRMSVT*SCVGEMTFLRM
Trigger: CATCCTGAGAAAGGTCATTTCTCCCACACACGACAAAGTCACAGACATCCTGCACCTGCCACTAGGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp CACTTTCAGGGAGGCGGATGTCCTCACTGGGCCCTCTaGCATCTCTTCAAAATGGGAATGACCAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HFQGGGCPHWAL*HLFKMGMTKFG
Trigger: TCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGGACATCCGCCTCCCTGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCACATCTCAGGAGGGTGGGATaGGCTGGACTCAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: QTHTHTPSCGDHLQNDPHLRRVG*AGLSYC
Trigger: ACAGTAACTGAGTCCAGCTCATCCCACCCTCCTGAG...ATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp AAGGGAAGGGAGTCTCAGATTAAGAAAACTGGAGAAATGGGCATGTCAGTAGGACTTCTGGCGGAGGGATaGGCACCACGTCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: KGRESQIKKTGEMGMSVGLLAEG*APRPSQ
Trigger: TTGACTTGGACGTGGTGCTCATCCCTCCGCCAGAAG...TCCTACTGACATGCCCATTTCTCCAGTTTTCTTAATCTGAGACTCCCTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TACAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGATTCATCTTGAGCCCTaGGTTGCGTGGTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: YNQVSKDGRVHLTHSQTMIHLEP*VAWWQR
Trigger: CCTTTGCCACCACGCAACTCAGGGCTCAAGATGAAT...CATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGTCCATTGTCTCATTTaGCTTTTTGTCTCAGGCATG +
Preference number: 4 (lower is better)
Translates to: GGKGSQVEHVSLLVQPGQVHCLI*LFVSGM
Trigger: CATGCCTGAGACAAAAAGTCAAATGAGACAATGGAC...CTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTGCTGGGCTCCCATCTTaGTGTCAGCCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSAGLPS*CQPSPG
Trigger: CCCAGGGCTGGGCTGACATCAAGATGGGAGCCCAGC...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AAGGGAAGGGAGTCTCAGATTAAGAAAACTGGAGAAATGGGCATGTCAGTAGGACAGAGCGGGTGGAGGTaGTGCTCATCATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KGRESQIKKTGEMGMSVGQSGWR*CSSCCH
Trigger: GTGACAGCATGATGAGCAGCACCTCCACCCGCTCTG...TCCTACTGACATGCCCATTTCTCCAGTTTTCTTAATCTGAGACTCCCTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp CAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCACATCCAGGTCAGCCAGCTTaGCTACCTGGATACCTGCAA +
Preference number: 4 (lower is better)
Translates to: QTHTHTPSCGDHLQNDPHPGQPA*LPGYLQ
Trigger: TTGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGG...ATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTACAGGAAGTCGTAGCTaGTATCACTCTCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTTGSRS*YHSPLG
Trigger: ACCCAGTGGAGAGTGATAGCAGCTACGACTTCCTGT...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461135.2
CDS-3UTR CCA 90 bp CAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGTATGTCCAGTGAGCCAATaGTCTCCTCCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QPGVKGWKGSSHTLTDHVCPVSQ*SPPGRA
Trigger: TGCTCTTCCTGGAGGAGACCATTGGCTCACTGGACA...TACATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCAACCTCTGGGAGTTGTaGCTGGCTCAGACTCGTCAG +
Preference number: 4 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFNLWEL*LAQTRQ
Trigger: CTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTT...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTCTCAGTTACTGTCCTTaGCGTTCGTCCTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTLSYCP*RSSLLS
Trigger: ACTCAGCAAGGACGAACGCCAAGGACAGTAACTGAG...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGAGGGTGGGATGAGCTaGACTCAGTTACTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIEGGMS*TQLLSL
Trigger: CAAGGACAGTAACTGAGTCCAGCTCATCCCACCCTC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGTCCCGGAAAGCTTCTaGCGGAGGGATGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSAVPESF*RRDEHH
Trigger: GTGGTGCTCATCCCTCCGCCAGAAGCTTTCCGGGAC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAGTTTCCTTGGCTTTTTaGGACATGGCTTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRVSLAF*DMASEG
Trigger: TCCTTCAGAAGCCATGTCCCAAAAAGCCAAGGAAAC...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGGCAAAGGCTCCCAAGTaGAGCATGTGTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVAKAPK*SMCLFL
Trigger: CAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGC...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCCAGCTCTCACTAGGCTaGACTCTACCCAATGTAAGA +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGQLSLG*TLPNVR
Trigger: TCTTACATTGGGTAGAGTCCAGCCTAGTGAGAGCTG...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTTTTTTGTCTCAGGCATaGCCAGCCCCTTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIFLSQA*PAPSLS
Trigger: GCTGAGTGAAGGGGCTGGCCATGCCTGAGACAAAAA...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCCCAGGTGTCAAAGGATaGAAGGGTTCATCTCACACA +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGPGVKG*KGSSHT
Trigger: TGTGTGAGATGAACCCTTCCATCCTTTGACACCTGG...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TACAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGGGCATCTTTCTCAGTTaGAAGGTAGCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: YNQVSKDGRVHLTHSQTMGIFLS*KVAAQS
Trigger: GGACTGAGCAGCTACCTTTCAACTGAGAAAGATGCC...CATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCCGACAGCACAGTTGGTaGTTGAATTTATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGRQHSW*LNLSSL
Trigger: CAGGCTTGATAAATTCAATCACCAACTGTGCTGTCG...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTCTCTCCTCTAGTCCATaGGATTACAGCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTLSSSP*DYSFAH
Trigger: GTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGAG...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTTTACGTGCTTTTCTCTaGTCTTGCAGTGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGLRAFL*SCSEQE
Trigger: CTCCTGTTCACTGCAAGAGCAGAGAAAAGCACGTAA...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAAGGAGCTGGGGACAGATaGTGGGCCCGTGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKGAGDR*WARVSL
Trigger: CAAGGAGACACGGGCCCAGCATCTGTCCCCAGCTCC...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCATGCCTAGTGGCAGGTaGAGGATGTCTGTGACTTTG +
Preference number: 4 (lower is better)
Translates to: HTKHTHTHPLVEITFRMIMPSGR*RMSVTL
Trigger: CAAAGTCACAGACATCCTGCACCTGCCACTAGGCAT...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCCTGGGTTGGCTGCTCTaGCTGACCTGTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TVTHCVISIASVMYPAAPLGWLL*LTCSFS
Trigger: TGAGAAAGAACAGGTCAGCCAGAGCAGCCAACCCAG...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAGTTTCCTTGGCTTTTTaGGACATGGCTTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSVSLAF*DMASEG
Trigger: TCCTTCAGAAGCCATGTCCCAAAAAGCCAAGGAAAC...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TTTTCAGAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAGGCACTGTTTGCCCTTaGGGCCTTAGGGATAGAAAT +
Preference number: 4 (lower is better)
Translates to: FSEILGFDGAASIRTQSRGTVCP*GLRDRN
Trigger: ATTTCTATCCCTAAGGCCCCAAGGGCAAACAGTGCC...TCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAATCAACCGAGAGATTaGGTTACAGGGACGTATCCT +
Preference number: 4 (lower is better)
Translates to: ERWQHATRVRTSALSLNGNQPRD*VTGTYP
Trigger: AGGATACGTCCCTGTAACCCAATCTCTCGGTTGATT...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCATAAAGCCCGTGGGCTaGGCTCCCATCTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: TVTHCVISIASVMYPAAPIKPVG*APILMS
Trigger: TGACATCAAGATGGGAGCCCAGCCCACGGGCTTTAT...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCGTGGCATCAAGGCTATaGCAGGGTATAGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: HTKHTHTHPLVEITFRMIVASRL*QGIAEI
Trigger: GATCTCTGCTATACCCTGCCATAGCCTTGATGCCAC...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGACCTCTGTGTGAGATaGCACGTGGTCCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSADLCVR*HVVLPC
Trigger: GCAGGGTAGGACCACGTGCCATCTCACACAGAGGTC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGCACTCTCCACTGGGTTaGGGGCTGAAGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWHSPLG*GLKREK
Trigger: CTTTTCTCTCTTCAGCCCCCAACCCAGTGGAGAGTG...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461135.2
3UTR CAA 72 bp CAAGTCATTGACACGTCCATTGTCTCATTTGACTTTTaGTCTCAGGCATGGCCAGCCCCTTCACTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QVIDTSIVSFDF*SQAWPAPSLSS
Trigger: AGAGCTGAGTGAAGGGGCTGGCCATGCCTGAGACAAAAAGTCAAATGAGACAATGGACGTGTCAATGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 72 bp CAACAAGAGCTGTTCTGCTATCAATCAACCGAGAGATaGGGTTACAGGGACGTATCCTGTCTTTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QQELFCYQSTER*GYRDVSCLWDW
Trigger: CCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAACAGCTCTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTAGCCTCCGTGTCCAGTaGGCCAATGGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSSLRVQ*ANGLLQ
Trigger: CTGGAGGAGACCATTGGCTCACTGGACACGGAGGCT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAACTGGAGAGTCAGCCCTaGCTCTGGCTTCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKLESQP*LWLRWS
Trigger: ACTCCACCGAAGCCAGAGTCAGGGCTGACTCTCCAG...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGGCTTCAGGTTATGGGTTaGAATAGACACAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: VAKAPKWSMCLFLFSQDRLQVMG*NRHRNQ
Trigger: TTGATTTCTGTGTCTATTTCAACCCATAACCTGAAG...CCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTAGTGGGCTCATCGGTTaGCCTCTGTGTGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSASGLIG*PLCEMA
Trigger: TGCCATCTCACACAGAGGTCAACCGATGAGCCCACT...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp ACCCTACTCTTACCTCCCTCCCCATCAATTCAAGCTGAATTAAGAGAAATCCTAGAAGGCATGTACGAGTaGGTGGGCTCATCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: TLLLPPSPSIQAELREILEGMYE*VGSSVD
Trigger: GTCAACCGATGAGCCCACTCACTCGTACATGCCTTC...TAGGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTTGCTTAGATTCTGCATaGCTTCTCCTGTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFCLDSA*LLLSIP
Trigger: GGGGATGGACAGGAGAAGTCATGCAGAATCTAAGCA...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTAGTCAGGGCACTGTTTaGCCTTGGGGCCTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSASQGTV*PWGLRD
Trigger: ATCCCTAAGGCCCCAAGGGCAAACAGTGCCCTGACT...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCAAATTTAAAACTACCTaGATCAGCACAGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPKFKTT*ISTEKI
Trigger: GATCTTCTCTGTGCTGATGCAGGTAGTTTTAAATTT...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTATGAGATTACAGCTTTaGACACTGACAGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIMRLQL*TLTGGS
Trigger: GGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCAT...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTAACCTCTGGGAGTTGTaGCTGGCTCAGACTCGTCAG +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSANLWEL*LAQTRQ
Trigger: CTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTT...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCACATTGGCTTCTGGCAATGTaGATATTCCTAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QTHTHTPSCGDHLQNDPHWLLAM*IFLGRL
Trigger: CAGCCTCCCTAGGAATATCCACATTGCCAGAAGCCA...ATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTCTTTTCCTGAAGTTCTaGCTTCTGGCAATGTGGATA +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGLFLKF*LLAMWI
Trigger: TATCCACATTGCCAGAAGCCAGAACTTCAGGAAAAG...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCTGGCTTTTTGGGACATaGCTTCTGAAGGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HTKHTHTHPLVEITFRMIWLFGT*LLKESA
Trigger: AGCAGACTCCTTCAGAAGCCATGTCCCAAAAAGCCA...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTAGGCTGAGCCAGACCTaGAGCTGGGGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKIRLSQT*SWGQML
Trigger: CAGCATCTGTCCCCAGCTCCAGGTCTGGCTCAGCCT...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCAAAGGTCCCTGAGCTaGACCTGGAGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLQRSLS*TWSWSR
Trigger: CCGGCTCCAGCTCCAGGTCCAGCTCAGGGACCTTTG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAACTTAGGGATAGAAATTaGCATAGATTTGCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGRTGVAESGTTAQLVIELRDRN*HRFASC
Trigger: GCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAG...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGAGAGGATGTATTGTGTaGGTTTTCTATCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRRGCIV*VFYHWN
Trigger: GTTCCAGTGATAGAAAACCCACACAATACATCCTCT...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGGGAAGGGAGTCTCAGATTAAGAAAACTGGAGAAATGGGCATGTCAGTAGGAAGCTCTTTCCCTAAATaGCAGGCTGACCCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: KGRESQIKKTGEMGMSVGSSFPK*QADPGL
Trigger: TAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCT...TCCTACTGACATGCCCATTTCTCCAGTTTTCTTAATCTGAGACTCCCTTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCAAGGGGAGAGGTGTTCTaGTTAATGATGAGTTACCAT +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSRGEVF*LMMSYH
Trigger: ATGGTAACTCATCATTAACCAGAACACCTCTCCCCT...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAACCTTTCTCAGGATGTaGGAATATAATAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRTFLRM*EYNRLY
Trigger: GTACAGCCTATTATATTCCCACATCCTGAGAAAGGT...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AAGGGAAGGGAGTCTCAGATTAAGAAAACTGGAGAAATGGGCATGTCAGTAGGAGCATGTACGAGTGAGTaGGCTCATCGGTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: KGRESQIKKTGEMGMSVGACTSE*AHRLTS
Trigger: AGAGGTCAACCGATGAGCCCACTCACTCGTACATGC...TCCTACTGACATGCCCATTTCTCCAGTTTTCTTAATCTGAGACTCCCTTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCTCATGCTTCCCACTGTaGAAGAAGGCATGTACGAGT +
Preference number: 4 (lower is better)
Translates to: HTKHTHTHPLVEITFRMISCFPL*KKACTS
Trigger: ACTCGTACATGCCTTCTTCCACAGTGGGAAGCATGA...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTATTGGCAAAGGTCCCTaGGCTGGACCTGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKIIGKGP*AGPGAG
Trigger: TCCAGCTCCAGGTCCAGCTCAGGGACCTTTGCCAAT...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAACCCTCCCATTCATCTTaGGCCCTGAGTTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKPSHSS*ALSCVV
Trigger: CACCACGCAACTCAGGGCTCAAGATGAATGGGAGGG...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTAGATCACCTTCAGAATaGTCCACATGGGAACTCAAT +
Preference number: 4 (lower is better)
Translates to: SPLVHEITALHTDRRVLPRSPSE*STWELN
Trigger: ATTGAGTTCCCATGTGGATCATTCTGAAGGTGATCT...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCGGCCCCTCTTACCTCTaGTATTCTATTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFGPSYL*YSIKTG
Trigger: GCCAGTCTTAATAGAATATCAGAGGTAAGAGGGGCC...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGGCCCCTCTTACCTCTaGTATTCTATTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWGPSYL*YSIKTG
Trigger: GCCAGTCTTAATAGAATATCAGAGGTAAGAGGGGCC...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTACACCTCACATACCATaGCAGGGTGGAGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALITPHIP*QGGVFV
Trigger: AACAAATACTCCACCCTGTCATGGTATGTGAGGTGT...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGCAAAATATGCTCCTTaGAGGATGAGGATGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIAKYAP*RMRMWR
Trigger: TCTCCACATCCTCATCCTTCAAGGAGCATATTTTGC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGACCCATCAATTCAAGCTaGATTAAGAGAAATCCTATG +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRPINSS*IKRNPM
Trigger: CATAGGATTTCTCTTAATTCAGCTTGAATTGATGGG...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTTTCTTTGAAAAGGGATaGGTAACTCTGACCCTACTC +
Preference number: 4 (lower is better)
Translates to: SPLVHEITALHTDRRVLPFFEKG*VTLTLL
Trigger: GAGTAGGGTCAGAGTTACTCATCCCTTTTCAAAGAA...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTCCTCCCCTTTCTCCATaGAACGAACGTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFPPLSP*NERQHS
Trigger: TGAATGTTGACGTTCGTTTCATGGAGAAAGGGGAGG...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAAGTATTATCATTTATTaGGTAGCTACACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRILSLGLVILRGQWVKRSIIIY*VATLWP
Trigger: TGGCCACAGTGTAGCTACTCAATAAATGATAATACT...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGCTTCTGAAGGAGTCTaGTCTCTTTCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSAASEGV*SLSWEL
Trigger: CAGCTCCCAGGAAAGAGAGCAGACTCCTTCAGAAGC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp AGCTTTCTCTCTTTCTGGGGGTGTATAATAAGACATAACTTGGCCGGTTGTGGGGCTTTTCTCTGCTCTTaGAGTGAACAGGAGATCAGG +
Preference number: 4 (lower is better)
Translates to: SFLSFWGCIIRHNLAGCGAFLCS*SEQEIR
Trigger: CCTGATCTCCTGTTCACTGCAAGAGCAGAGAAAAGC...CCCACAACCGGCCAAGTTATGTCTTATTATACACCCCCAGAAAGAGAGAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCAAGTCAGGGCACTGTTTaGCCTTGGGGCCTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPSQGTV*PWGLRD
Trigger: ATCCCTAAGGCCCCAAGGGCAAACAGTGCCCTGACT...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCACCTAAGAGCAAAATATaGTCCTTGAAGGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSPKSKI*SLKDED
Trigger: ATCCTCATCCTTCAAGGAGCATATTTTGCTCTTAGG...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGAGAAATCCTATGTGGATACACAGATACAATGACCTCAGCTCTGTCTAGCACCACTCCTTCTCTTCAGTaGACAGGAAGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: REILCGYTDTMTSALSSTTPSLQ*TGSRSC
Trigger: GCAGCTACGACTTCCTGTCCACTGAAGAGAAGGAGT...GGTGCTAGACAGAGCTGAGGTCATTGTATCTGTGTATCCACATAGGATTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAAGCTCAGACTCGTCAGTaGACAGTCCGCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKAQTRQ*TVRCQP
Trigger: AGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGC...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTTTCCCTACACTGCTCTaGCTGGGTGTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLFPTLL*LGVPES
Trigger: GCTTTCCGGGACACCCAGCCAGAGCAGTGTAGGGAA...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGAATTACGTAAGACACTaGGCGAGATCTTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVNYVRH*ARSCPR
Trigger: TCTTGGACAAGATCTCGCCCAGTGTCTTACGTAATT...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCACATGGGAACTCAATaGCACAACACTGAATATAAA +
Preference number: 4 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTHMGTQ*HNTEYK
Trigger: TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTAGAGGATGTATTGTGTaGGTTTTCTATCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGRGCIV*VFYHWN
Trigger: GTTCCAGTGATAGAAAACCCACACAATACATCCTCT...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TTTTCAGAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGACGTTTTCAGAAATTCTaGGCTTTGATGGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: FSEILGFDGAASIRTQSRRFQKF*ALMVLR
Trigger: ACGCAGCACCATCAAAGCCCAGAATTTCTGAAAACG...TCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTACATACCATGACAGGGTaGAGTATTTGTTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: AKERWQHATRVRTSALSLHTMTG*SICCPY
Trigger: ATAAGGACAACAAATACTCCACCCTGTCATGGTATG...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp TTTTCAGAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAGCTGAATATAGCATGTaGAATCAGTCCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FSEILGFDGAASIRTQSRAEYSM*NQSSRR
Trigger: CCTTCTGGAGGACTGATTCCACATGCTATATTCAGC...TCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAAGGCCACTCCTGTATTTaGCAGGTGGCTTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKGHSCI*QVACAQ
Trigger: CTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCC...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp GGCATTTGCTCAAGCTGCACAACTTGGTCACGGAATTaGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GICSSCTTWSRN*RGEVFWLMMSY
Trigger: GTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
3UTR CAA 72 bp CTATTCAATCTACACCTCCAGCTCGAACTCAGAACATaGACAGGAACCTGCTCTTCAATCTTTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: LFNLHLQLELRT*TGTCSSIFHLP
Trigger: GGGGAGGTGAAAGATTGAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTGTTGGCTGCTCTGGCTaGCCTGTTCTTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLVGCSG*PVLSQA
Trigger: AGCCTGAGAAAGAACAGGTCAGCCAGAGCAGCCAAC...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp ACCCTACTCTTACCTCCCTCCCCATCAATTCAAGCTGAATTAAGAGAAATCCTAGGCACTTTGAGATCTTaGAGGGCCTTAGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TLLLPPSPSIQAELREILGTLRS*RALGLS
Trigger: ACTCAACCCTAAGGCCCTTCAAGATCTCAAAGTGCC...TAGGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCACAGGCTTTTGGATGTaGGTGTATGAGCAAACGTAC +
Preference number: 4 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFTGFWM*VYEQTY
Trigger: GTACGTTTGCTCATACACGCACATCCAAAAGCCTGT...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp CAACCAGGTGTCAAAGGATGGAAGGGTTCATCTCACACACTCACAGACCATGTAACATTGACAGGAACCTaGTCTTCAATCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: QPGVKGWKGSSHTLTDHVTLTGT*SSIFHL
Trigger: GAGGTGAAAGATTGAAGAGCAGGTTCCTGTCAATGT...TACATGGTCTGTGAGTGTGTGAGATGAACCCTTCCATCCTTTGACACCTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTTCTGGGAGTTGTGGCTaGCTCAGACTCGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSSGSCG*LRLVSG
Trigger: TCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGA...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCTCTTTCCTGGGAGCTaGATGGTGTGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLLFPGS*MVCGAG
Trigger: CCCAGCTCCACACACCATCCAGCTCCCAGGAAAGAG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTGTCTGCTCTCTTTCCTaGGAGCTGGATGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLVCSLS*ELDGVW
Trigger: CCACACACCATCCAGCTCCCAGGAAAGAGAGCAGAC...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGCTTTCTCTCTTTCTGGGGGTGTATAATAAGACATAACTTGGCCGGTTGTGGGTGCTGGTTTTGGGGCTaGCATCTTTCTCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SFLSFWGCIIRHNLAGCGCWFWG*HLSQLK
Trigger: TTTCAACTGAGAAAGATGCCAGCCCCAAAACCAGCA...CCCACAACCGGCCAAGTTATGTCTTATTATACACCCCCAGAAAGAGAGAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCCACATGGGAACTCAATaGCACAACACTGAATATAAA +
Preference number: 4 (lower is better)
Translates to: KRHLSSNIPFICPSHLGIHMGTQ*HNTEYK
Trigger: TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTG...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGAGTGGCATAAATATGTaGTCACTTATCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SINREIGLQGRILSLGLVSGINM*SLILPS
Trigger: AGAAGGCAGGATAAGTGACCACATATTTATGCCACT...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGTCATTCTTCAGGTTATaGGTTGAAATAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: HATRVRTSALSLNGRLTRSFFRL*VEIDTE
Trigger: TTCTGTGTCTATTTCAACCCATAACCTGAAGAATGA...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTCCTGTATTTGGCAGGTaGCTTGTGCCCAGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKIPVFGR*LVPSGI
Trigger: GATGCCACTGGGCACAAGCCACCTGCCAAATACAGG...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTTCAGCTCTTGCATTCTaGGGCAACCCTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLSALAF*GNPAGG
Trigger: TCCTCCTGCAGGGTTGCCTCAGAATGCAAGAGCTGA...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTATTCATCTTGAGCCCTaGGTTGCGTGGTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSIHLEP*VAWWQR
Trigger: CCTTTGCCACCACGCAACTCAGGGCTCAAGATGAAT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCAGATCACCTTCAGAATaGTCCACATGGGAACTCAAT +
Preference number: 4 (lower is better)
Translates to: TVTHCVISIASVMYPAAPRSPSE*STWELN
Trigger: ATTGAGTTCCCATGTGGATCATTCTGAAGGTGATCT...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp AGCTTTCTCTCTTTCTGGGGGTGTATAATAAGACATAACTTGGCCGGTTGTGGGGTCCATTGTCTCATTTaGCTTTTTGTCTCAGGCATG +
Preference number: 4 (lower is better)
Translates to: SFLSFWGCIIRHNLAGCGVHCLI*LFVSGM
Trigger: CATGCCTGAGACAAAAAGTCAAATGAGACAATGGAC...CCCACAACCGGCCAAGTTATGTCTTATTATACACCCCCAGAAAGAGAGAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCCCACCCACAATTCTTTaGAAAGGGATGAGTAACTCT +
Preference number: 4 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFPPTIL*KGMSNS
Trigger: AGAGTTACTCATCCCTTTTCAAAGAATTGTGGGTGG...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCAAGCATCTTCAGCTCTTaGATTCTGAGGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPSIFSS*ILRQPC
Trigger: GCAGGGTTGCCTCAGAATGCAAGAGCTGAAGATGCT...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTCATAGATTTGCTAGCTaGAACATTGCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSAHRFAS*NIAWSW
Trigger: CCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATG...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTCTGGCTAAGGAGAGGTaGCAGCATGCAACAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSLAKER*QHATRV
Trigger: TACCCTTGTTGCATGCTGCCACCTCTCCTTAGCCAG...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTTCAAGCTGCACAACTTaGTCACGGAATTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: INMWSLILPSQTNKSCSASSCTT*SRNLRG
Trigger: TCCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGA...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTGGGTGGTGCTTTTCCTaGAGTTCTGGCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLGWCFS*SSGFWQ
Trigger: TTGCCAGAAGCCAGAACTTCAGGAAAAGCACCACCC...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAAGGCATCTTTCTCAGTTaGAAGGTAGCTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKGIFLS*KVAAQS
Trigger: GGACTGAGCAGCTACCTTTCAACTGAGAAAGATGCC...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTGGCCCATATTTCATGTaGCCCTGCATTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKIGPYFM*PCICWM
Trigger: CATCCAGCAAATGCAGGGTCACATGAAATATGGGCC...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ACCCTACTCTTACCTCCCTCCCCATCAATTCAAGCTGAATTAAGAGAAATCCTACGACAGCACAGTTGGTaGTTGAATTTATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TLLLPPSPSIQAELREILRQHSW*LNLSSL
Trigger: CAGGCTTGATAAATTCAATCACCAACTGTGCTGTCG...TAGGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp ACCCTACTCTTACCTCCCTCCCCATCAATTCAAGCTGAATTAAGAGAAATCCTATTGGATGTGCGTGTATaGGCAAACGTACACAGAAAC +
Preference number: 4 (lower is better)
Translates to: TLLLPPSPSIQAELREILLDVRV*ANVHRN
Trigger: GTTTCTGTGTACGTTTGCTCATACACGCACATCCAA...TAGGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTAGCTGCAACATTGCCTaGAGCTGGAGACTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSSCNIA*SWRLHW
Trigger: CCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCAGCCAGCTTGCCTACCTaGATACCTGCAAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPASLPT*IPAKSF
Trigger: GAAAGATTTTGCAGGTATCCAGGTAGGCAAGCTGGC...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTATTGGGGACACCCTTTaGGGAGATCTTGACACTGAC +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSIGDTL*GDLDTD
Trigger: GTCAGTGTCAAGATCTCCCCAAAGGGTGTCCCCAAT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCACATCTGGGCATCCTaGACTCCAAGCAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLHIWAS*TPSSSQ
Trigger: TTGTGAACTGCTTGGAGTCCAGGATGCCCAGATGTG...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCATTGTGTGTACCTGGTTaGGACTGTTTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPLCVPG*DCFLGF
Trigger: AAAGCCAAGGAAACAGTCTCAACCAGGTACACACAA...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTGGCATTTGCTCAAGCTaGACAACTTGGTCACGGAAT +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSGICSS*TTWSRN
Trigger: ATTCCGTGACCAAGTTGTGCAGCTTGAGCAAATGCC...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCTCAGTTACTGTCCTTaGCGTTCGTCCTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLLSYCP*RSSLLS
Trigger: ACTCAGCAAGGACGAACGCCAAGGACAGTAACTGAG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTAACATTGCCTGGAGCTaGAGACTTCATTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSNIAWS*RLHWQR
Trigger: CCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp ACCCTACTCTTACCTCCCTCCCCATCAATTCAAGCTGAATTAAGAGAAATCCTAAATTACGTAAGACACTaGGCGAGATCTTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TLLLPPSPSIQAELREILNYVRH*ARSCPR
Trigger: TCTTGGACAAGATCTCGCCCAGTGTCTTACGTAATT...TAGGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCAGCTCTCACTAGGCTaGACTCTACCCAATGTAAGA +
Preference number: 4 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLQLSLG*TLPNVR
Trigger: TCTTACATTGGGTAGAGTCCAGCCTAGTGAGAGCTG...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTACTGAGAGAGGGATCTaGCAAGGTATGAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLTERGI*QGMSQS
Trigger: AGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGT...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGACAATCTTGAAAGGGTaGTATTATTTTCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWTILKG*YYFPRL
Trigger: AAGACGGGGAAAATAATACCACCCTTTCAAGATTGT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR TCA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTAGCACAGAGAAGATCTaGAACGGTTCTTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSSTEKI*NGSWVF
Trigger: AAACACCCAAGAACCGTTTCAGATCTTCTCTGTGCT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp CCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTTGGATTTCTGAATATAAATGTATaGTTGGACTCAAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: PHWALLHLFKMGMTKFGFLNINV*LDSNLS
Trigger: GGAGAGATTTGAGTCCAAGCATACATTTATATTCAG...AAATCCAAACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR GCA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCAAATTTAAAACTACCTaGATCAGCACAGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: TVTHCVISIASVMYPAAPKFKTT*ISTEKI
Trigger: GATCTTCTCTGTGCTGATGCAGGTAGTTTTAAATTT...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTTTGTGTGTACCTGGTTaGGACTGTTTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLLCVPG*DCFLGF
Trigger: AAAGCCAAGGAAACAGTCTCAACCAGGTACACACAA...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR TCA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAAAGCACAGTTGGTGATTaGATTTATCAAGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKSTVGD*IYQACG
Trigger: TCCACAGGCTTGATAAATTCAATCACCAACTGTGCT...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CCA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTAGTGGCATAAATATGTaGTCACTTATCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLSGINM*SLILPS
Trigger: AGAAGGCAGGATAAGTGACCACATATTTATGCCACT...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CCA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCTTAGGGATAGAAATTaGCATAGATTTGCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLLRDRN*HRFASC
Trigger: GCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR GCA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTCTGAATATAAATGTATaGTTGGACTCAAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKILNINV*LDSNLS
Trigger: GGAGAGATTTGAGTCCAAGCATACATTTATATTCAG...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 72 bp ACATCTAACAAGAGCAAAATTCTGAACAGTGACTCATaGTGTTATATCAATAGCTTCAGTGATGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: TSNKSKILNSDS*CYINSFSDVSS
Trigger: GCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGTTCAGAATTTTGCTCTTGTTAGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
3UTR CAA 72 bp ATGGGAATGACCAAGTTTGGATTTATTATTCTATTCTaGAATCCCAAAGACCATCCTAAGAGCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: MGMTKFGFIILF*NPKDHPKSKIC
Trigger: GCATATTTTGCTCTTAGGATGGTCTTTGGGATTCAAGAATAGAATAATAAATCCAAACTTGGTCATTCCCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS CCA 90 bp GGAGCTGGGGTGTGTGGCCCTGCTGTCCTGGCCCCTCGGGCAGGCTaGCTTCCCTACACTGCTCTGGCTGGGTGTCCCGGAAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GAGVCGPAVLAPRAG*LPYTALAGCPGKLL
Trigger: CAGAAGCTTTCCGGGACACCCAGCCAGAGCAGTGTAGGGAAGCCAGCCTGCCCGAGGGGCCAGGACAGCAGGGCCACACACCCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 90 bp GCTGCTCATCATGCTGTCACAGCTGCCGACACGGGTCACGGGTTCTaGGCCAGTCCCCGCTGGCCACAGCTCCCTCTCGGGCATCACCCG +
Preference number: 5 (lower is better)
Translates to: AAHHAVTAADTGHGF*ASPRWPQLPLGHHP
Trigger: CGGGTGATGCCCGAGAGGGAGCTGTGGCCAGCGGGGACTGGCTCAGAACCCGTGACCCGTGTCGGCAGCTGTGACAGCATGATGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS CCA 90 bp GAAGGAGTCTGCTCTCTTTCCTGGGAGCTGGATGGTGTGTGGAGCTaGGGTGTGTGGCCCTGCTGTCCTGGCCCCTCGGGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: EGVCSLSWELDGVWS*GVWPCCPGPSGRLA
Trigger: AGCCAGCCTGCCCGAGGGGCCAGGACAGCAGGGCCACACACCCCAGCTCCACACACCATCCAGCTCCCAGGAAAGAGAGCAGACTCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 90 bp TACACTGCTCTGGCTGGGTGTCCCGGAAAGCTTCTGGCGGAGGGATaGGCACCACGTCCAAGTCAAGGGCAGCCTCCTGGGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: YTALAGCPGKLLAEG*APRPSQGQPPGGWQ
Trigger: CTGCCAGCCCCCAGGAGGCTGCCCTTGACTTGGACGTGGTGCTCATCCCTCCGCCAGAAGCTTTCCGGGACACCCAGCCAGAGCAGTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GCCTGGAGCTGGAGACTTCATTGGCAAAGGTCCCTGAGCTGGACCTaGAGCTGGAGCCGGAGCTTGAGCCAGAGCCTTCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AWSWRLHWQRSLSWT*SWSRSLSQSLPSSR
Trigger: CCTGCTGCTGGGAAGGCTCTGGCTCAAGCTCCGGCTCCAGCTCCAGGTCCAGCTCAGGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 90 bp CATCTGTCTCAGGCCAGGGGTGTTGCTCTCCTGGAGAGTCAGCCCTaGCTCTGGCTTCGGTGGAGTCAGGGCACTGTTTGCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: HLSQARGVALLESQP*LWLRWSQGTVCPWG
Trigger: GCCCCAAGGGCAAACAGTGCCCTGACTCCACCGAAGCCAGAGTCAGGGCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGAGACAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 90 bp GGTCTCCTCTGGACCTCCCCGGGGAGTGGGTTGGGTTATGGGCAGTaGTCGGAAACCTCTGGGAGTTGTGGCTGGCTCAGACTCGTCAGT +
Preference number: 5 (lower is better)
Translates to: GLLWTSPGSGLGYGQ*SETSGSCGWLRLVS
Trigger: ACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCCGGGGAGGTCCAGAGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp CTCCCCGGGGAGTGGGTTGGGTTATGGGCAGTGCTCGGAAACCTCTaGGAGTTGTGGCTGGCTCAGACTCGTCAGTGGACAGTCCGCTGT +
Preference number: 5 (lower is better)
Translates to: LPGEWVGLWAVLGNL*ELWLAQTRQWTVRC
Trigger: ACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp CTGCCTGGGTTGGCTGCTCTGGCTGACCTGTTCTTTCTCAGGCTCTaGCGCAAGCCTCCCCGGTTCTCCAGGGTTGTGACTGCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LPGLAALADLFFLRL*RKPPRFSRVVTASL
Trigger: CAGGCTAGCAGTCACAACCCTGGAGAACCGGGGAGGCTTGCGCCAGAGCCTGAGAAAGAACAGGTCAGCCAGAGCAGCCAACCCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp CCGTGCCCAGGGAGGCCGGGCGGGGCCGAGAATTACGTAAGACACTaGGCGAGATCTTGTCCAAGAAGGAGCCCTTTCCCAGAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PCPGRPGGAENYVRH*ARSCPRRSPFPEKC
Trigger: GCACTTCTCTGGGAAAGGGCTCCTTCTTGGACAAGATCTCGCCCAGTGTCTTACGTAATTCTCGGCCCCGCCCGGCCTCCCTGGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 90 bp AGGCCAGAATCTCCAGGGGCAGCCTCAGTGTGGCGGGACAGCCAGTaGTGGGGGTCACTGTGGAAACTGCTTCGGCTGCTCTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: RPESPGAASVWRDSQ*WGSLWKLLRLLFRT
Trigger: TGTTCTGAAGAGCAGCCGAAGCAGTTTCCACAGTGACCCCCAGCACTGGCTGTCCCGCCACACTGAGGCTGCCCCTGGAGATTCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 90 bp AGGACAGGCGCTTGGAGCTCTGCTCCTGCTCCAGGTCAGCCAGCTTaGCTACCTGGATACCTGCAAAATCTTTCCCCGTGCCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RTGAWSSAPAPGQPA*LPGYLQNLSPCPGR
Trigger: CCTCCCTGGGCACGGGGAAAGATTTTGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGGAGCAGGAGCAGAGCTCCAAGCGCCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GGGTTGGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGTTGTGGCTaGCTCAGACTCGTCAGTGGACAGTCCGCTGTCAGCCTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: GLGYGQCSETSGSCG*LRLVSGQSAVSLRV
Trigger: GACACGGAGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GAGTGGGTTGGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGTTGTaGCTGGCTCAGACTCGTCAGTGGACAGTCCGCTGTCAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: EWVGLWAVLGNLWEL*LAQTRQWTVRCQPP
Trigger: CGGAGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp AGTGAACAGGAGATCAGGCCAGAATCTCCAGGGGCAGCCTCAGTGTaGCGGGACAGCCAGTGCTGGGGGTCACTGTGGAAACTGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SEQEIRPESPGAASV*RDSQCWGSLWKLLR
Trigger: CCGAAGCAGTTTCCACAGTGACCCCCAGCACTGGCTGTCCCGCCACACTGAGGCTGCCCCTGGAGATTCTGGCCTGATCTCCTGTTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GTGCTCGGAAACCTCTGGGAGTTGTGGCTGGCTCAGACTCGTCAGTaGACAGTCCGCTGTCAGCCTCCGTGTCCAGTGAGCCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: VLGNLWELWLAQTRQ*TVRCQPPCPVSQWS
Trigger: AGACCATTGGCTCACTGGACACGGAGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp TTTGGGACATGGCTTCTGAAGGAGTCTGCTCTCTTTCCTGGGAGCTaGATGGTGTGTGGAGCTGGGGTGTGTGGCCCTGCTGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FGTWLLKESALFPGS*MVCGAGVCGPAVLA
Trigger: GGCCAGGACAGCAGGGCCACACACCCCAGCTCCACACACCATCCAGCTCCCAGGAAAGAGAGCAGACTCCTTCAGAAGCCATGTCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GGGGCAGCCTCAGTGTGGCGGGACAGCCAGTGCTGGGGGTCACTGTaGAAACTGCTTCGGCTGCTCTTCAGAACAATATTAGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GAASVWRDSQCWGSL*KLLRLLFRTILGGS
Trigger: GCTGCCACCTAATATTGTTCTGAAGAGCAGCCGAAGCAGTTTCCACAGTGACCCCCAGCACTGGCTGTCCCGCCACACTGAGGCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 90 bp GACCTGGAGCTGGGGACAGATGCTGGGCCCGTGTCTCCTTGGGTCTaGTGGAGCTGGTGGGCTTACTTAAGTGGAGTCCAGGCTCATCTT +
Preference number: 5 (lower is better)
Translates to: DLELGTDAGPVSPWV*WSWWAYLSGVQAHL
Trigger: AAGATGAGCCTGGACTCCACTTAAGTAAGCCCACCAGCTCCATCAGACCCAAGGAGACACGGGCCCAGCATCTGTCCCCAGCTCCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 90 bp GGTAGCTGCTCAGTCCCACGCCTGAGCGCTCCAGAGTGTTGGACTTaGAGTTCATCTGTCTCAGGCCAGGGGTGTTGCTCTCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GSCSVPRLSAPECWT*SSSVSGQGCCSPGE
Trigger: CTCTCCAGGAGAGCAACACCCCTGGCCTGAGACAGATGAACTTCAAGTCCAACACTCTGGAGCGCTCAGGCGTGGGACTGAGCAGCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp CCAGAATCTCCAGGGGCAGCCTCAGTGTGGCGGGACAGCCAGTGCTaGGGGTCACTGTGGAAACTGCTTCGGCTGCTCTTCAGAACAATA +
Preference number: 5 (lower is better)
Translates to: PESPGAASVWRDSQC*GSLWKLLRLLFRTI
Trigger: TATTGTTCTGAAGAGCAGCCGAAGCAGTTTCCACAGTGACCCCCAGCACTGGCTGTCCCGCCACACTGAGGCTGCCCCTGGAGATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp ACAGGGCGGCCCCTGCCAGATCATGCTTCCCACTGTGGAAGAAGGCATGTACGAATCTTGAGCCCTGAGTaGCGTGGTGGCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TGRPLPDHASHCGRRHVRILSPE*RGGKGS
Trigger: GGAGCCTTTGCCACCACGCAACTCAGGGCTCAAGAT...TCGTACATGCCTTCTTCCACAGTGGGAAGCATGATCTGGCAGGGGCCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS TCA 90 bp CTCAGACTCGTCAGTGGACAGTCCGCTGTCAGCCTCCGTGTCCAGTaGGCCAATGGTCTCCTCCAGGAAGAGCAGACACTCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LRLVSGQSAVSLRVQ*ANGLLQEEQTLLLF
Trigger: GAAGAGAAGGAGTGTCTGCTCTTCCTGGAGGAGACCATTGGCTCACTGGACACGGAGGCTGACAGCGGACTGTCCACTGACGAGTCTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 90 bp TCTTTCTCAGGCTCTGGCGCAAGCCTCCCCGGTTCTCCAGGGTTGTaGCTGCTAGCCTGGGTGGTGCTTTTCCTGAAGTTCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SFSGSGASLPGSPGL*LLAWVVLFLKFWLL
Trigger: CAGAAGCCAGAACTTCAGGAAAAGCACCACCCAGGCTAGCAGTCACAACCCTGGAGAACCGGGGAGGCTTGCGCCAGAGCCTGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp CGTCAGTGGACAGTCCGCTGTCAGCCTCCGTGTCCAGTGAGCCAATaGTCTCCTCCAGGAAGAGCAGACACTCCTTCTCTTCAGTGGACA +
Preference number: 5 (lower is better)
Translates to: RQWTVRCQPPCPVSQ*SPPGRADTPSLQWT
Trigger: TGTCCACTGAAGAGAAGGAGTGTCTGCTCTTCCTGGAGGAGACCATTGGCTCACTGGACACGGAGGCTGACAGCGGACTGTCCACTGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAACTCAGGCCAGGGGTGTaGCTCTCCTGGAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AGRTGVAESGTTAQLVIELRPGV*LSWRVS
Trigger: GCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGAG...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCGGCTGGGCTCCCATCTaGATGTCAGCCCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: KRHLSSNIPFICPSHLGIGWAPI*MSAQPW
Trigger: CCAGGGCTGGGCTGACATCAAGATGGGAGCCCAGCC...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCTGGGCCCGTGTCTCCTaGGGTCTGATGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ERWQHATRVRTSALSLNGWARVS*GLMELV
Trigger: CACCAGCTCCATCAGACCCAAGGAGACACGGGCCCA...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp AGCCAATGGTCTCCTCCAGGAAGAGCAGACACTCCTTCTCTTCAGTaGACAGGAAGTCGTAGCTGCTATCACTCTCCACTGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SQWSPPGRADTPSLQ*TGSRSCYHSPLGWG
Trigger: CCCCCAACCCAGTGGAGAGTGATAGCAGCTACGACTTCCTGTCCACTGAAGAGAAGGAGTGTCTGCTCTTCCTGGAGGAGACCATTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461135.2
CDS-3UTR CAA 90 bp GAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAAATTCTTCCCCGGGGAGTGGGTaGGGTTATGGGCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: EILGFDGAASIRTQSRNSSPGSG*GYGQCS
Trigger: CGAGCACTGCCCATAACCCAACCCACTCCCCGGGGA...AGAATTTCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp GAGAGGCCACTCCTGTATTTGGCAGGTGGCTTGTGCCCAGTGGCATCAAGGCTAGAGCATCTTCAGCTCTaGCATTCTGAGGCAACCCTG +
Preference number: 5 (lower is better)
Translates to: ERPLLYLAGGLCPVASRLEHLQL*HSEATL
Trigger: CAGGGTTGCCTCAGAATGCAAGAGCTGAAGATGCTC...TAGCCTTGATGCCACTGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGAGCTAGTCGGCTGTTaGGGTCCTCCCCTGATGAGA +
Preference number: 5 (lower is better)
Translates to: HATRVRTSALSLNGRLTRELVGC*GPPLMR
Trigger: TCTCATCAGGGGAGGACCCAAACAGCCGACTAGCTC...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CGGATGTCCTCACTGGGCCCTCTTGCATCTCTTCAAAATGGGAATGACCAAGTTCTCAGGCCAGGGGTGTaGCTCTCCTGGAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: RMSSLGPLASLQNGNDQVLRPGV*LSWRVS
Trigger: GCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGAG...AACTTGGTCATTCCCATTTTGAAGAGATGCAAGAGGGCCCAGTGAGGACATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp CATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGTCCAGGTCAGCCAGCTaGCCTACCTGGATACCTGCA +
Preference number: 5 (lower is better)
Translates to: HATRVRTSALSLNGRLTRSRSAS*PTWIPA
Trigger: TGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGGA...CCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGTCCCTTCTGTGTTCATaGGGGACACCCTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GGKGSQVEHVSLLVQPGQSLLCS*GTPFGE
Trigger: CTCCCCAAAGGGTGTCCCCAATGAACACAGAAGGGA...CTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCAGCATGTGTCTCTTCTaGTTCAGCCAGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPSMCLF*FSQDRV
Trigger: GACCCTGTCCTGGCTGAACAAGAAGAGACACATGCT...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTTGTTCAGCCAGGACAGTCCCTCCCATTCATCTaGAGCCCTGAGTTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: GGKGSQVEHVSLLVQPGQSLPFI*SPELRG
Trigger: ACCACGCAACTCAGGGCTCAAGATGAATGGGAGGGA...CTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTCTCTTAGCCCAGGCCTaGTCCAGAAGGCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTLLAQA*SRRLEL
Trigger: CAGTTCCAGCCTTCTGGACAAGGCCTGGGCTAAGAG...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAAATTCTTGGGCCCGTGTCTCCTaGGGTCTGATGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: EILGFDGAASIRTQSRNSWARVS*GLMELV
Trigger: CACCAGCTCCATCAGACCCAAGGAGACACGGGCCCA...AGAATTTCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTGTCACGGCTCTGTCCTaGGTAGGACAGGCGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SPLVHEITALHTDRRVLPVTALS*VGQALG
Trigger: TCCAAGCGCCTGTCCTACCAAGGACAGAGCCGTGAC...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGGCTGGGCTCCCATCTaGATGTCAGCCCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWGWAPI*MSAQPW
Trigger: CCAGGGCTGGGCTGACATCAAGATGGGAGCCCAGCC...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 90 bp CACTGGGCGAGATCTTGTCCAAGAAGGAGCCCTTTCCCAGAGAAGTaGTGGTTTTGGGGCTGGCATCTTTCTCAGTTGAAAGGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: HWARSCPRRSPFPEK*WFWGWHLSQLKGSC
Trigger: GCAGCTACCTTTCAACTGAGAAAGATGCCAGCCCCAAAACCAGCACTTCTCTGGGAAAGGGCTCCTTCTTGGACAAGATCTCGCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCCAGGGCCCCAGGTTCCACCCAAGTTTTACTTTATAGCTATTCCCAAGTTTCCGGAAACCTCTGGGAGTaGTGGCTGGCTCAGACTCGT +
Preference number: 5 (lower is better)
Translates to: ARAPGSTQVLLYSYSQVSGNLWE*WLAQTR
Trigger: ACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCC...GGAAACTTGGGAATAGCTATAAAGTAAAACTTGGGTGGAACCTGGGGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTACACTGGGCGAGATCTaGTCCAAGAAGGAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTTLGEI*SKKEPF
Trigger: AAAGGGCTCCTTCTTGGACAAGATCTCGCCCAGTGT...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCGTCACGGCTCTGTCCTaGGTAGGACAGGCGCTTGGA +
Preference number: 5 (lower is better)
Translates to: HTKHTHTHPLVEITFRMIVTALS*VGQALG
Trigger: TCCAAGCGCCTGTCCTACCAAGGACAGAGCCGTGAC...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCTCCCTCCCATTCATCTaGAGCCCTGAGTTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: KRHLSSNIPFICPSHLGISLPFI*SPELRG
Trigger: ACCACGCAACTCAGGGCTCAAGATGAATGGGAGGGA...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAACTTGGTCACGGAATTaGAGGGGAGAGGTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRILSLGLVILRGQWVKRTWSRN*RGEVFW
Trigger: CCAGAACACCTCTCCCCTCAAATTCCGTGACCAAGT...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAGAGCATCTTCAGCTCTaGCATTCTGAGGCAACCCTG +
Preference number: 5 (lower is better)
Translates to: AKERWQHATRVRTSALSLEHLQL*HSEATL
Trigger: CAGGGTTGCCTCAGAATGCAAGAGCTGAAGATGCTC...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGAGAGCGCTCCAGAGTGTaGGACTTGAAGTTCATCTGT +
Preference number: 5 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGERSRV*DLKFIC
Trigger: ACAGATGAACTTCAAGTCCAACACTCTGGAGCGCTC...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCTCCAGGTCAGCCAGCTaGCCTACCTGGATACCTGCA +
Preference number: 5 (lower is better)
Translates to: HTKHTHTHPLVEITFRMISRSAS*PTWIPA
Trigger: TGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGGA...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTTCCCTTCTGTGTTCATaGGGGACACCCTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTSLLCS*GTPFGE
Trigger: CTCCCCAAAGGGTGTCCCCAATGAACACAGAAGGGA...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAACACACACACACCCTCTaGTGGAGATCACCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: AGRTGVAESGTTAQLVIEHTHTL*WRSPSE
Trigger: TTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTG...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGACAATCAACCGAGAGATaGGGTTACAGGGACGTATCC +
Preference number: 5 (lower is better)
Translates to: GRILSLGLVILRGQWVKRQSTER*GYRDVS
Trigger: GGATACGTCCCTGTAACCCAATCTCTCGGTTGATTG...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCCTGGCAGAGGATGTATaGTGTGGGTTTTCTATCACT +
Preference number: 5 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPLAEDV*CGFSIT
Trigger: AGTGATAGAAAACCCACACAATACATCCTCTGCCAG...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GGACGTATCCTGTCTTTGGGACTGGTGATACTGAGAGGGCAGTGGGTGAAGAGAAGGCACTTTGAGATCTaGAAGGGCCTTAGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: GRILSLGLVILRGQWVKRRHFEI*KGLRVE
Trigger: CTCAACCCTAAGGCCCTTCAAGATCTCAAAGTGCCT...TCTCTTCACCCACTGCCCTCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAACCCTCTTTCGGCATTaGCTCAAGCTGCACAACTTG +
Preference number: 5 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPTLFRH*LKLHNL
Trigger: CAAGTTGTGCAGCTTGAGCAAATGCCGAAAGAGGGT...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS GCA 90 bp TGCCCTTGGGGCCTTAGGGATAGAAATTGGCATAGATTTGCTAGCTaGAACATTGCCTGGAGCTGGAGACTTCATTGGCAAAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CPWGLRDRNWHRFAS*NIAWSWRLHWQRSL
Trigger: CAGGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAGGCCCCAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GTTGTGTGTACCTGGTTGAGACTGTTTCCTTGGCTTTTTGGGACATaGCTTCTGAAGGAGTCTGCTCTCTTTCCTGGGAGCTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: VVCTWLRLFPWLFGT*LLKESALFPGSWMV
Trigger: CACCATCCAGCTCCCAGGAAAGAGAGCAGACTCCTTCAGAAGCCATGTCCCAAAAAGCCAAGGAAACAGTCTCAACCAGGTACACACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp GATAGAAATTGGCATAGATTTGCTAGCTGCAACATTGCCTGGAGCTaGAGACTTCATTGGCAAAGGTCCCTGAGCTGGACCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: DRNWHRFASCNIAWS*RLHWQRSLSWTWSW
Trigger: CCAGCTCCAGGTCCAGCTCAGGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 90 bp TGGAGTCAGGGCACTGTTTGCCCTTGGGGCCTTAGGGATAGAAATTaGCATAGATTTGCTAGCTGCAACATTGCCTGGAGCTGGAGACTT +
Preference number: 5 (lower is better)
Translates to: WSQGTVCPWGLRDRN*HRFASCNIAWSWRL
Trigger: AAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAGGCCCCAAGGGCAAACAGTGCCCTGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGGACTGGTGTTGCTAGCTGCAACATaGCCTGGAGCTGGAGACTTC +
Preference number: 5 (lower is better)
Translates to: SINREIGLQGRILSLGLVLLAAT*PGAGDF
Trigger: GAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAA...CACCAGTCCCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCTAAGGAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAGAGCGCTCCAGAGTGTaGGACTTGAAGTTCATCTGT +
Preference number: 5 (lower is better)
Translates to: AKERWQHATRVRTSALSLERSRV*DLKFIC
Trigger: ACAGATGAACTTCAAGTCCAACACTCTGGAGCGCTC...TAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTCCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCACATCTCTTAGCCCAGGCCTaGTCCAGAAGGCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: QTHTHTPSCGDHLQNDPHLLAQA*SRRLEL
Trigger: CAGTTCCAGCCTTCTGGACAAGGCCTGGGCTAAGAG...ATGTGGATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TTCTTGGGTGTTTATAAAGCCCGTGGGCTGGGCTCCCATCTTGATGTCAGCCCAAGGATGTCTGTGACTTaGTCGTGTGTGGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: FLGVYKARGLGSHLDVSPRMSVT*SCVGEM
Trigger: CATTTCTCCCACACACGACAAAGTCACAGACATCCT...TGGGCTGACATCAAGATGGGAGCCCAGCCCACGGGCTTTATAAACACCCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS CCA 90 bp CTTAGGGATAGAAATTGGCATAGATTTGCTAGCTGCAACATTGCCTaGAGCTGGAGACTTCATTGGCAAAGGTCCCTGAGCTGGACCTGG +
Preference number: 5 (lower is better)
Translates to: LRDRNWHRFASCNIA*SWRLHWQRSLSWTW
Trigger: CCAGGTCCAGCTCAGGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTTCCCCGGGGAGTGGGTaGGGTTATGGGCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKISPGSG*GYGQCS
Trigger: CGAGCACTGCCCATAACCCAACCCACTCCCCGGGGA...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GAGAGGTGGCAGCATGCAACAAGGGTAAGAACCTCAGCTCTTTCCCTAAATGGCTGGCATCTTTCTCAGTaGAAAGGTAGCTGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: ERWQHATRVRTSALSLNGWHLSQ*KGSCSV
Trigger: GACTGAGCAGCTACCTTTCAACTGAGAAAGATGCCA...GCCATTTAGGGAAAGAGCTGAGGTTCTTACCCTTGTTGCATGCTGCCACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTTGGCATCTTTCTCAGTaGAAAGGTAGCTGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGWHLSQ*KGSCSV
Trigger: GACTGAGCAGCTACCTTTCAACTGAGAAAGATGCCA...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTGGACGTATCCTGTCTTaGGGACTGGTGATACTGAGA +
Preference number: 5 (lower is better)
Translates to: SPLVHEITALHTDRRVLPGRILS*GLVILR
Trigger: TCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp AGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGTAGGGATTCCAGGAGGGACGACAGCACAGTaGGTGATTGAATTTATCAAG +
Preference number: 5 (lower is better)
Translates to: RGIWQGMSQSPSTVGIPGGTTAQ*VIEFIK
Trigger: CTTGATAAATTCAATCACCAACTGTGCTGTCGTCCC...TCCTGGAATCCCTACAGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AAGGCTGGAACTGAGAGAGGGATCTGGCAAGGTATGAGCCAGTCTCCATCCACTGATCTGAAACGGTTCTaGGGTGTTTATAAAGCCCGT +
Preference number: 5 (lower is better)
Translates to: KAGTERGIWQGMSQSPSTDLKRF*GVYKAR
Trigger: ACGGGCTTTATAAACACCCAAGAACCGTTTCAGATC...AGTGGATGGAGACTGGCTCATACCTTGCCAGATCCCTCTCTCAGTTCCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGACTCAGTTACTGTCCTaGGCGTTCGTCCTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWTQLLS*AFVLAE
Trigger: CTCAGCAAGGACGAACGCCAAGGACAGTAACTGAGT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCAGGAAGAACGGGAGTAGCAGAGTCAGGGACGACAGCACAGTTGGTGATTGAAGAAATTGGCATAGATTaGCTAGCTGCAACATTGCCT +
Preference number: 5 (lower is better)
Translates to: AGRTGVAESGTTAQLVIEEIGID*LAATLP
Trigger: AGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTC...TTCAATCACCAACTGTGCTGTCGTCCCTGACTCTGCTACTCCCGTTCTTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AGGGATTCCAGGAGGCCCATATTTCATGTGACCCTGCATTTGCTGGATGTGACTTCCAGAGTGTTGGACTaGAAGTTCATCTGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RDSRRPIFHVTLHLLDVTSRVLD*KFICLR
Trigger: CCTGAGACAGATGAACTTCAAGTCCAACACTCTGGA...AGTCACATCCAGCAAATGCAGGGTCACATGAAATATGGGCCTCCTGGAATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCAGCATGTGTCTCTTCTaGTTCAGCCAGGACAGGGTC +
Preference number: 5 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFSMCLF*FSQDRV
Trigger: GACCCTGTCCTGGCTGAACAAGAAGAGACACATGCT...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTATCTTGAGCCCTGAGTaGCGTGGTGGCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: INMWSLILPSQTNKSCSAILSPE*RGGKGS
Trigger: GGAGCCTTTGCCACCACGCAACTCAGGGCTCAAGAT...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGTCTCATTTGACTTTTaGTCTCAGGCATGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIVSFDF*SQAWPA
Trigger: GGCTGGCCATGCCTGAGACAAAAAGTCAAATGAGAC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp CTCAGCTCTTTCCCTAAATGGCAGGCTGACCCGGGGTTAGTCACTTCCCTTCCCTCATTGACACGTCCATaGTCTCATTTGACTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSSFPKWQADPGLVTSLPSLTRP*SHLTFC
Trigger: ACAAAAAGTCAAATGAGACAATGGACGTGTCAATGA...GGGAAGGGAAGTGACTAACCCCGGGTCAGCCTGCCATTTAGGGAAAGAGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AGCTTTCTCTCTTTCTGGGGGTGTATAATAAGACATAACTTGGCCGGTTGTGGGCTCAAGCTGCACAACTaGGTCACGGAATTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SFLSFWGCIIRHNLAGCGLKLHN*VTEFEG
Trigger: CCCCTCAAATTCCGTGACCAAGTTGTGCAGCTTGAG...CCCACAACCGGCCAAGTTATGTCTTATTATACACCCCCAGAAAGAGAGAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp AGAGAAATCCTATGTGGATACACAGATACAATGACCTCAGCTCTGTCTAGCACCTTGCTAGCTGCAACATaGCCTGGAGCTGGAGACTTC +
Preference number: 5 (lower is better)
Translates to: REILCGYTDTMTSALSSTLLAAT*PGAGDF
Trigger: GAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAA...GGTGCTAGACAGAGCTGAGGTCATTGTATCTGTGTATCCACATAGGATTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp ACAGTGACTCATTGTGTTATATCAATAGCTTCAGTGATGTATCCAGCGGCCCCCGGACGTATCCTGTCTTaGGGACTGGTGATACTGAGA +
Preference number: 5 (lower is better)
Translates to: TVTHCVISIASVMYPAAPGRILS*GLVILR
Trigger: TCTCAGTATCACCAGTCCCAAAGACAGGATACGTCC...GGGGGCCGCTGGATACATCACTGAAGCTATTGATATAACACAATGAGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCTTAGGGTTGAGTCTTaGATGGTGACTATGGCTCCT +
Preference number: 5 (lower is better)
Translates to: HTKHTHTHPLVEITFRMILRVES*MVTMAP
Trigger: AGGAGCCATAGTCACCATCAAAGACTCAACCCTAAG...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp ATTCAATCTACACCTCCAGCTCGAACTCAGAACATTGACAGGAACCTGCTCTTCCAGAAATTCTGGGCTTaGATGGTGCTGCGTCCATCA +
Preference number: 5 (lower is better)
Translates to: IQSTPPARTQNIDRNLLFQKFWA*MVLRPS
Trigger: TGATGGACGCAGCACCATCAAAGCCCAGAATTTCTG...GAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAGCTGGAGGTGTAGATTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCAAGGCCACTCCTGTATTaGGCAGGTGGCTTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPRPLLY*AGGLCP
Trigger: TGGGCACAAGCCACCTGCCAAATACAGGAGTGGCCT...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp GAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGAAATTCTCTCGAACTCAGAACATaGACAGGAACCTGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EILGFDGAASIRTQSRNSLELRT*TGTCSS
Trigger: TGAAGAGCAGGTTCCTGTCAATGTTCTGAGTTCGAG...AGAATTTCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAAGGAAACCTCTGGGAGTaGTGGCTGGCTCAGACTCGT +
Preference number: 5 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKGNLWE*WLAQTR
Trigger: ACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCC...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TCTCCTCTAGTCCATGAGATTACAGCTTTGCACACTGACAGGAGGGTCCTTCCTCGTCCATTGTCTCATTaGACTTTTTGTCTCAGGCAT +
Preference number: 5 (lower is better)
Translates to: SPLVHEITALHTDRRVLPRPLSH*TFCLRH
Trigger: ATGCCTGAGACAAAAAGTCAAATGAGACAATGGACG...AGGAAGGACCCTCCTGTCAGTGTGCAAAGCTGTAATCTCATGGACTAGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCTGGCAGAGGATGTATaGTGTGGGTTTTCTATCACT +
Preference number: 5 (lower is better)
Translates to: HTKHTHTHPLVEITFRMILAEDV*CGFSIT
Trigger: AGTGATAGAAAACCCACACAATACATCCTCTGCCAG...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GCAGGGTATAGCAGAGATCTAAGGCCAAGTGGAAGTAGAGCTGTCGCTTTGATTGAAATTGGCATAGATTaGCTAGCTGCAACATTGCCT +
Preference number: 5 (lower is better)
Translates to: AGYSRDLRPSGSRAVALIEIGID*LAATLP
Trigger: AGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTC...AATCAAAGCGACAGCTCTACTTCCACTTGGCCTTAGATCTCTGCTATACCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp TATGGCTCCTTAGGGTGCTGTGTGGATGTACAAGAGCACTGGCTAAGGAGAGGTAATATAAATGTATGCTaGGACTCAAATCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: YGSLGCCVDVQEHWLRRGNINVC*DSNLSL
Trigger: GAGGGAGAGATTTGAGTCCAAGCATACATTTATATT...ACCTCTCCTTAGCCAGTGCTCTTGTACATCCACACAGCACCCTAAGGAGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AGCCTGTGGAGAAGGACTCTCCCTGGTGGAGGTAGTGGCATAAATATGTGGTCACTGAACAGTGACTCATaGTGTTATATCAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: SLWRRTLPGGGSGINMWSLNSDS*CYINSF
Trigger: GAAGCTATTGATATAACACAATGAGTCACTGTTCAG...TGACCACATATTTATGCCACTACCTCCACCAGGGAGAGTCCTTCTCCACAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp ATAAATATGTGGTCACTTATCCTGCCTTCTCAGACCAACAAGAGCTGTTCTGCTGTCTCATTTGACTTTTaGTCTCAGGCATGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: INMWSLILPSQTNKSCSAVSFDF*SQAWPA
Trigger: GGCTGGCCATGCCTGAGACAAAAAGTCAAATGAGAC...AGCAGAACAGCTCTTGTTGGTCTGAGAAGGCAGGATAAGTGACCACATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AAAAGGCACCTTTCCAGCAACATTCCCTTCATCTGCCCCTCACATCTGGGCATCGTCCTTATGTTAACCTaGTCACCGTTTTCAGAAATT +
Preference number: 5 (lower is better)
Translates to: KRHLSSNIPFICPSHLGIVLMLT*SPFSEI
Trigger: AATTTCTGAAAACGGTGACAAGGTTAACATAAGGAC...GATGCCCAGATGTGAGGGGCAGATGAAGGGAATGTTGCTGGAAAGGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp TTCTGCTATCAATCAACCGAGAGATTGGGTTACAGGGACGTATCCTGTCTTTGGATAATAAGACATAACTaGGCCGGTTGTGGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: FCYQSTERLGYRDVSCLWIIRHN*AGCGSP
Trigger: AGGACTCCCACAACCGGCCAAGTTATGTCTTATTAT...CCAAAGACAGGATACGTCCCTGTAACCCAATCTCTCGGTTGATTGATAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCCTCCAAGCTTGTATTaGCAAGCCCACACCACCCAC +
Preference number: 5 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLPPSLY*QAHTTH
Trigger: GTGGGTGGTGTGGGCTTGCAAATACAAGCTTGGAGG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp CTCACTAGGCTGGACTCTACCCAATGTAAGAAAACATCTAACAAGAGCAAAATTGTCTCACCTCCAAGCTaGTATTTGCAAGCCCACACC +
Preference number: 5 (lower is better)
Translates to: LTRLDSTQCKKTSNKSKIVSPPS*YLQAHT
Trigger: GGTGTGGGCTTGCAAATACAAGCTTGGAGGTGAGAC...AATTTTGCTCTTGTTAGATGTTTTCTTACATTGGGTAGAGTCCAGCCTAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATCACTCTCCACTGGGTaGGGGGCTGAAGAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKSLSTG*GAEERK
Trigger: TTTTCTCTCTTCAGCCCCCAACCCAGTGGAGAGTGA...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461135.2
CDS-3UTR CAA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTACACTGGGCGAGATCTaGTCCAAGAAGGAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLTLGEI*SKKEPF
Trigger: AAAGGGCTCCTTCTTGGACAAGATCTCGCCCAGTGT...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTCACACACACACCCTCTaGTGGAGATCACCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSHTHTL*WRSPSE
Trigger: TTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTG...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CACACCAAACACACACACACACACCCTCTTGTGGAGATCACCTTCAGAATGATCCTGAACAGTGACTCATaGTGTTATATCAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: HTKHTHTHPLVEITFRMILNSDS*CYINSF
Trigger: GAAGCTATTGATATAACACAATGAGTCACTGTTCAG...GATCATTCTGAAGGTGATCTCCACAAGAGGGTGTGTGTGTGTGTGTTTGGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TTTTCAGAAATTCTGGGCTTTGATGGTGCTGCGTCCATCAGGACACAGTCCAGATCATTGACACGTCCATaGTCTCATTTGACTTTTTGT +
Preference number: 5 (lower is better)
Translates to: FSEILGFDGAASIRTQSRSLTRP*SHLTFC
Trigger: ACAAAAAGTCAAATGAGACAATGGACGTGTCAATGA...TCTGGACTGTGTCCTGATGGACGCAGCACCATCAAAGCCCAGAATTTCTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp ATCACCTTCAGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAACAATCAACCGAGAGATaGGGTTACAGGGACGTATCC +
Preference number: 5 (lower is better)
Translates to: ITFRMIHMGTQWHNTEYKQSTER*GYRDVS
Trigger: GGATACGTCCCTGTAACCCAATCTCTCGGTTGATTG...TTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCTGAAGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp CTTACCTCTGATATTCTATTAAGACTGGCAGAGGATGTATTGTGTGGGTTTTCTAGGCACTTTGAGATCTaGAAGGGCCTTAGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: LTSDILLRLAEDVLCGFSRHFEI*KGLRVE
Trigger: CTCAACCCTAAGGCCCTTCAAGATCTCAAAGTGCCT...AGAAAACCCACACAATACATCCTCTGCCAGTCTTAATAGAATATCAGAGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp TTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTCCAGATCTGAAACGGTTCTaGGGTGTTTATAAAGCCCGT +
Preference number: 5 (lower is better)
Translates to: FEGRGVLVNDELPYSYLPDLKRF*GVYKAR
Trigger: ACGGGCTTTATAAACACCCAAGAACCGTTTCAGATC...TGGAAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTTCCAGAGTGTTGGACTaGAAGTTCATCTGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLSRVLD*KFICLR
Trigger: CCTGAGACAGATGAACTTCAAGTCCAACACTCTGGA...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp GAATTTGAGGGGAGAGGTGTTCTGGTTAATGATGAGTTACCATATAGCTATCTTGGGACGACAGCACAGTaGGTGATTGAATTTATCAAG +
Preference number: 5 (lower is better)
Translates to: EFEGRGVLVNDELPYSYLGTTAQ*VIEFIK
Trigger: CTTGATAAATTCAATCACCAACTGTGCTGTCGTCCC...AAGATAGCTATATGGTAACTCATCATTAACCAGAACACCTCTCCCCTCAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS-3UTR CAA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCTTAGGGTTGAGTCTTaGATGGTGACTATGGCTCCT +
Preference number: 5 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLLRVES*MVTMAP
Trigger: AGGAGCCATAGTCACCATCAAAGACTCAACCCTAAG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS-3UTR CAA 90 bp AGAATGATCCACATGGGAACTCAATGGCACAACACTGAATATAAATGTATGCTTCGTCCATTGTCTCATTaGACTTTTTGTCTCAGGCAT +
Preference number: 5 (lower is better)
Translates to: RMIHMGTQWHNTEYKCMLRPLSH*TFCLRH
Trigger: ATGCCTGAGACAAAAAGTCAAATGAGACAATGGACG...AAGCATACATTTATATTCAGTGTTGTGCCATTGAGTTCCCATGTGGATCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp CTGGGCTGGAGCTGCAGGCTGAGCCAGACCTGGAGCTaGGGACAGATGCTGGGCCCGTGTCTCCTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: LGWSCRLSQTWS*GQMLGPCLLGS
Trigger: AGACCCAAGGAGACACGGGCCCAGCATCTGTCCCCAGCTCCAGGTCTGGCTCAGCCTGCAGCTCCAGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 72 bp AGCGGGTGGAGGTGCTGCTCATCATGCTGTCACAGCTaGCGACACGGGTCACGGGTTCTGAGCCAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: SGWRCCSSCCHS*RHGSRVLSQSP
Trigger: CGGGGACTGGCTCAGAACCCGTGACCCGTGTCGGCAGCTGTGACAGCATGATGAGCAGCACCTCCACCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359470.6
CDS TCA 72 bp TTGAGCCAGAGCCTTCCCAGCAGCAGGAATAGCTGCTaGGGCCTGGGCTGGAGCTGCAGGCTGAGCCAGACC +
Preference number: 6 (lower is better)
Translates to: LSQSLPSSRNSC*GLGWSCRLSQT
Trigger: GGTCTGGCTCAGCCTGCAGCTCCAGCCCAGGCCTCAGCAGCTATTCCTGCTGCTGGGAAGGCTCTGGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 72 bp CAGGCCAGGGGTGTTGCTCTCCTGGAGAGTCAGCCCTaGCTCTGGCTTCGGTGGAGTCAGGGCACTGTTTGC +
Preference number: 6 (lower is better)
Translates to: QARGVALLESQP*LWLRWSQGTVC
Trigger: GCAAACAGTGCCCTGACTCCACCGAAGCCAGAGTCAGGGCTGACTCTCCAGGAGAGCAACACCCCTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 72 bp TGGACCTCCCCGGGGAGTGGGTTGGGTTATGGGCAGTaGTCGGAAACCTCTGGGAGTTGTGGCTGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: WTSPGSGLGYGQ*SETSGSCGWLR
Trigger: TCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCCGGGGAGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp TCTCCTCTGGACCTCCCCGGGGAGTGGGTTGGGTTATaGGCAGTGCTCGGAAACCTCTGGGAGTTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: SPLDLPGEWVGL*AVLGNLWELWL
Trigger: CAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCCGGGGAGGTCCAGAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GCTTGTCACGGCTCTGTCCTTGGTAGGACAGGCGCTTaGAGCTCTGCTCCTGCTCCAGGTCAGCCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: ACHGSVLGRTGA*SSAPAPGQPAC
Trigger: GCAAGCTGGCTGACCTGGAGCAGGAGCAGAGCTCCAAGCGCCTGTCCTACCAAGGACAGAGCCGTGACAAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 90 bp GGGGAGTGGGTTGGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGTaGTGGCTGGCTCAGACTCGTCAGTGGACAGTCCGCTGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GEWVGLWAVLGNLWE*WLAQTRQWTVRCQP
Trigger: AGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp AACCTCTGGGAGTTGTGGCTGGCTCAGACTCGTCAGTaGACAGTCCGCTGTCAGCCTCCGTGTCCAGTGAGC +
Preference number: 6 (lower is better)
Translates to: NLWELWLAQTRQ*TVRCQPPCPVS
Trigger: GCTCACTGGACACGGAGGCTGACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GTGATGGTCTCCTCTGGACCTCCCCGGGGAGTGGGTTaGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGTT +
Preference number: 6 (lower is better)
Translates to: VMVSSGPPRGVG*VMGSARKPLGV
Trigger: AACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCCGGGGAGGTCCAGAGGAGACCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GGGAGGCCGGGCGGGGCCGAGAATTACGTAAGACACTaGGCGAGATCTTGTCCAAGAAGGAGCCCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: GRPGGAENYVRH*ARSCPRRSPFP
Trigger: TGGGAAAGGGCTCCTTCTTGGACAAGATCTCGCCCAGTGTCTTACGTAATTCTCGGCCCCGCCCGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 72 bp AGTGATGGTCTCCTCTGGACCTCCCCGGGGAGTGGGTaGGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: SDGLLWTSPGSG*GYGQCSETSGS
Trigger: ACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTCCCCGGGGAGGTCCAGAGGAGACCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 72 bp GTCAGTGGACAGTCCGCTGTCAGCCTCCGTGTCCAGTaGGCCAATGGTCTCCTCCAGGAAGAGCAGACACTC +
Preference number: 6 (lower is better)
Translates to: VSGQSAVSLRVQ*ANGLLQEEQTL
Trigger: GAGTGTCTGCTCTTCCTGGAGGAGACCATTGGCTCACTGGACACGGAGGCTGACAGCGGACTGTCCACTGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 72 bp CTGGGGACAGATGCTGGGCCCGTGTCTCCTTGGGTCTaGTGGAGCTGGTGGGCTTACTTAAGTGGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: LGTDAGPVSPWV*WSWWAYLSGVQ
Trigger: CTGGACTCCACTTAAGTAAGCCCACCAGCTCCATCAGACCCAAGGAGACACGGGCCCAGCATCTGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp TATGGGCAGTGCTCGGAAACCTCTGGGAGTTGTGGCTaGCTCAGACTCGTCAGTGGACAGTCCGCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: YGQCSETSGSCG*LRLVSGQSAVS
Trigger: GCTGACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGTTGTaGCTGGCTCAGACTCGTCAGTGGACAGTCCGCTGT +
Preference number: 6 (lower is better)
Translates to: GLWAVLGNLWEL*LAQTRQWTVRC
Trigger: ACAGCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp TGGCTTCTGAAGGAGTCTGCTCTCTTTCCTGGGAGCTaGATGGTGTGTGGAGCTGGGGTGTGTGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: WLLKESALFPGS*MVCGAGVCGPA
Trigger: AGCAGGGCCACACACCCCAGCTCCACACACCATCCAGCTCCCAGGAAAGAGAGCAGACTCCTTCAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 72 bp GTTGGGTTATGGGCAGTGCTCGGAAACCTCTGGGAGTaGTGGCTGGCTCAGACTCGTCAGTGGACAGTCCGC +
Preference number: 6 (lower is better)
Translates to: VGLWAVLGNLWE*WLAQTRQWTVR
Trigger: GCGGACTGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 72 bp ACTCAGTTACTGTCCTTGGCGTTCGTCCTTGCTGAGTaGTGGTCTCCTCTGGACCTCCCCGGGGAGTGGGTT +
Preference number: 6 (lower is better)
Translates to: TQLLSLAFVLAE*WSPLDLPGEWV
Trigger: AACCCACTCCCCGGGGAGGTCCAGAGGAGACCATCACTCAGCAAGGACGAACGCCAAGGACAGTAACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 72 bp GCTTGGAGCTCTGCTCCTGCTCCAGGTCAGCCAGCTTaGCTACCTGGATACCTGCAAAATCTTTCCCCGTGC +
Preference number: 6 (lower is better)
Translates to: AWSSAPAPGQPA*LPGYLQNLSPC
Trigger: GCACGGGGAAAGATTTTGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGGAGCAGGAGCAGAGCTCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GAGTGGGTTGGGTTATGGGCAGTGCTCGGAAACCTCTaGGAGTTGTGGCTGGCTCAGACTCGTCAGTGGACA +
Preference number: 6 (lower is better)
Translates to: EWVGLWAVLGNL*ELWLAQTRQWT
Trigger: TGTCCACTGACGAGTCTGAGCCAGCCACAACTCCCAGAGGTTTCCGAGCACTGCCCATAACCCAACCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp AAGTTCATCTGTCTCAGGCCAGGGGTGTTGCTCTCCTaGAGAGTCAGCCCTGACTCTGGCTTCGGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: KFICLRPGVLLS*RVSPDSGFGGV
Trigger: GACTCCACCGAAGCCAGAGTCAGGGCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGAGACAGATGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 72 bp CTCAGTCCCACGCCTGAGCGCTCCAGAGTGTTGGACTaGAAGTTCATCTGTCTCAGGCCAGGGGTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: LSPTPERSRVLD*KFICLRPGVLL
Trigger: GAGCAACACCCCTGGCCTGAGACAGATGAACTTCAAGTCCAACACTCTGGAGCGCTCAGGCGTGGGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 72 bp CGCTTGGAGCTCTGCTCCTGCTCCAGGTCAGCCAGCTaGCCTACCTGGATACCTGCAAAATCTTTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: RLELCSCSRSAS*PTWIPAKSFPV
Trigger: CACGGGGAAAGATTTTGCAGGTATCCAGGTAGGCAAGCTGGCTGACCTGGAGCAGGAGCAGAGCTCCAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 90 bp TCCAGAGTGTTGGACTTGAAGTTCATCTGTCTCAGGCCAGGGGTGTaGCTCTCCTGGAGAGTCAGCCCTGACTCTGGCTTCGGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: SRVLDLKFICLRPGV*LSWRVSPDSGFGGV
Trigger: GACTCCACCGAAGCCAGAGTCAGGGCTGACTCTCCAGGAGAGCAACACCCCTGGCCTGAGACAGATGAACTTCAAGTCCAACACTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS TCA 72 bp TCAGTCCCACGCCTGAGCGCTCCAGAGTGTTGGACTTaGAGTTCATCTGTCTCAGGCCAGGGGTGTTGCTCT +
Preference number: 6 (lower is better)
Translates to: SVPRLSAPECWT*SSSVSGQGCCS
Trigger: AGAGCAACACCCCTGGCCTGAGACAGATGAACTTCAAGTCCAACACTCTGGAGCGCTCAGGCGTGGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp ACAGTCCGCTGTCAGCCTCCGTGTCCAGTGAGCCAATaGTCTCCTCCAGGAAGAGCAGACACTCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: TVRCQPPCPVSQ*SPPGRADTPSL
Trigger: AAGAGAAGGAGTGTCTGCTCTTCCTGGAGGAGACCATTGGCTCACTGGACACGGAGGCTGACAGCGGACTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 90 bp AGTTGCGTGGTGGCAAAGGCTCCCAAGTGGAGCATGTGTCTCTTCTaGTTCAGCCAGGACAGGGTCTGTACTGGTCGCAGAGTCTACTCC +
Preference number: 6 (lower is better)
Translates to: SCVVAKAPKWSMCLF*FSQDRVCTGRRVYS
Trigger: GGAGTAGACTCTGCGACCAGTACAGACCCTGTCCTGGCTGAACAAGAAGAGACACATGCTCCACTTGGGAGCCTTTGCCACCACGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 72 bp TTTTGGGGCTGGCATCTTTCTCAGTTGAAAGGTAGCTaGTCAGTCCCACGCCTGAGCGCTCCAGAGTGTTGG +
Preference number: 6 (lower is better)
Translates to: FWGWHLSQLKGS*SVPRLSAPECW
Trigger: CCAACACTCTGGAGCGCTCAGGCGTGGGACTGAGCAGCTACCTTTCAACTGAGAAAGATGCCAGCCCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GCAACCCTGCAGGAGGAGGCTGGGGTTGTGTGTACCTaGTTGAGACTGTTTCCTTGGCTTTTTGGGACATGG +
Preference number: 6 (lower is better)
Translates to: ATLQEEAGVVCT*LRLFPWLFGTW
Trigger: CCATGTCCCAAAAAGCCAAGGAAACAGTCTCAACCAGGTACACACAACCCCAGCCTCCTCCTGCAGGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 90 bp GCAGGAGGAGGCTGGGGTTGTGTGTACCTGGTTGAGACTGTTTCCTaGGCTTTTTGGGACATGGCTTCTGAAGGAGTCTGCTCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: AGGGWGCVYLVETVS*AFWDMASEGVCSLS
Trigger: GGAAAGAGAGCAGACTCCTTCAGAAGCCATGTCCCAAAAAGCCAAGGAAACAGTCTCAACCAGGTACACACAACCCCAGCCTCCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp TGGCATAGATTTGCTAGCTGCAACATTGCCTGGAGCTaGAGACTTCATTGGCAAAGGTCCCTGAGCTGGACC +
Preference number: 6 (lower is better)
Translates to: WHRFASCNIAWS*RLHWQRSLSWT
Trigger: GGTCCAGCTCAGGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GTGTCTCTTCTTGTTCAGCCAGGACAGGGTCTGTACTaGTCGCAGAGTCTACTCCTTCAACAGTCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: VSLLVQPGQGLY*SQSLLLQQSQL
Trigger: AAGCTGGGACTGTTGAAGGAGTAGACTCTGCGACCAGTACAGACCCTGTCCTGGCTGAACAAGAAGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp TCTCCTCCAGGAAGAGCAGACACTCCTTCTCTTCAGTaGACAGGAAGTCGTAGCTGCTATCACTCTCCACTG +
Preference number: 6 (lower is better)
Translates to: SPPGRADTPSLQ*TGSRSCYHSPL
Trigger: CAGTGGAGAGTGATAGCAGCTACGACTTCCTGTCCACTGAAGAGAAGGAGTGTCTGCTCTTCCTGGAGGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461135.2
CDS CAA 72 bp GGCTGGGGTTGTGTGTACCTGGTTGAGACTGTTTCCTaGGCTTTTTGGGACATGGCTTCTGAAGGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: GWGCVYLVETVS*AFWDMASEGVC
Trigger: GCAGACTCCTTCAGAAGCCATGTCCCAAAAAGCCAAGGAAACAGTCTCAACCAGGTACACACAACCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp ACCTGGTTGAGACTGTTTCCTTGGCTTTTTGGGACATaGCTTCTGAAGGAGTCTGCTCTCTTTCCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: TWLRLFPWLFGT*LLKESALFPGS
Trigger: GCTCCCAGGAAAGAGAGCAGACTCCTTCAGAAGCCATGTCCCAAAAAGCCAAGGAAACAGTCTCAACCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp GGCACTGTTTGCCCTTGGGGCCTTAGGGATAGAAATTaGCATAGATTTGCTAGCTGCAACATTGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: GTVCPWGLRDRN*HRFASCNIAWS
Trigger: GCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAGGCCCCAAGGGCAAACAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 72 bp GCCCTTGGGGCCTTAGGGATAGAAATTGGCATAGATTaGCTAGCTGCAACATTGCCTGGAGCTGGAGACTTC +
Preference number: 6 (lower is better)
Translates to: ALGALGIEIGID*LAATLPGAGDF
Trigger: GAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAGGCCCCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 90 bp GCACTGTTTGCCCTTGGGGCCTTAGGGATAGAAATTGGCATAGATTaGCTAGCTGCAACATTGCCTGGAGCTGGAGACTTCATTGGCAAA +
Preference number: 6 (lower is better)
Translates to: ALFALGALGIEIGID*LAATLPGAGDFIGK
Trigger: TTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAGGCCCCAAGGGCAAACAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 72 bp TTCTCTAGAGCTTCTTTACGTGCTTTTCTCTGCTCTTaGAGTGAACAGGAGATCAGGCCAGAATCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: FSRASLRAFLCS*SEQEIRPESPG
Trigger: CCCTGGAGATTCTGGCCTGATCTCCTGTTCACTGCAAGAGCAGAGAAAAGCACGTAAAGAAGCTCTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CCA 72 bp AGAAATTGGCATAGATTTGCTAGCTGCAACATTGCCTaGAGCTGGAGACTTCATTGGCAAAGGTCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: RNWHRFASCNIA*SWRLHWQRSLS
Trigger: GCTCAGGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS CAA 72 bp GGGATAGAAATTGGCATAGATTTGCTAGCTGCAACATaGCCTGGAGCTGGAGACTTCATTGGCAAAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GIEIGIDLLAAT*PGAGDFIGKGP
Trigger: GGGACCTTTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2
CDS GCA 72 bp GGCCTTAGGGATAGAAATTGGCATAGATTTGCTAGCTaGAACATTGCCTGGAGCTGGAGACTTCATTGGCAA +
Preference number: 6 (lower is better)
Translates to: GLRDRNWHRFAS*NIAWSWRLHWQ
Trigger: TTGCCAATGAAGTCTCCAGCTCCAGGCAATGTTGCAGCTAGCAAATCTATGCCAATTTCTATCCCTAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359470.6
ENST00000461135.2