RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF109 (Homo sapiens)

Ensembl gene IDs: ENSG00000116922

Ensembl transcript IDs: ENST00000358011.8, ENST00000461359.5, ENST00000464085.5, ENST00000464178.1, ENST00000472584.1, ENST00000477060.1, ENST00000486637.2, ENST00000488137.5, ENST00000491797.1, ENST00000491981.5, ENST00000494120.1, ENST00000498448.1, ENST00000609516.1, ENST00000619962.1

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTaGCATTCTCCCACCCCTGCGGCTACTCCAGACTCAGAGGAATGT +
Preference number: 1 (lower is better)
Translates to: GSRPWKCNPDGLTLG*HSPTPAATPDSEEC
Trigger: ACATTCCTCTGAGTCTGGAGTAGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR GCA 90 bp AGGGCAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTaGAGCTCCAAAATCAGACATCTAGGCGCTAATCCTCCCCAAGAC +
Preference number: 1 (lower is better)
Translates to: RARHGSHTLSHGLAC*SSKIRHLGANPPQD
Trigger: GTCTTGGGGAGGATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR TCA 90 bp AAGACACAAAACCAGGACCTGGTGTCAACCAGACAATGCTTTGGATaGTGCCAAGGGCAGTGTGGCTCTTTGCCTCTTGTCCTTGCTTCC +
Preference number: 1 (lower is better)
Translates to: KTQNQDLVSTRQCFG*CQGQCGSLPLVLAS
Trigger: GGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGGTCCTGGTTTTGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR GCA 90 bp CAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTaGCTCTTGTCCTTGCTTCCCCACCTCTTTAGGTCCACAATAGAG +
Preference number: 1 (lower is better)
Translates to: QPDNALDDAKGSVAL*LLSLLPHLFRSTIE
Trigger: CTCTATTGTGGACCTAAAGAGGTGGGGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 90 bp TCCCAGGCCTTGGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACTaGATAGACGAAAGAAGATACTTTCTCTTCAGGTACCTTTCTGGA +
Preference number: 1 (lower is better)
Translates to: SQALGKACMFAKSPH*IDERRYFLFRYLSG
Trigger: TCCAGAAAGGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR CCA 90 bp AGACAAAGCATTCAGAATGATTCATGCTGCACCACCTCCCCCTGGTaGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGT +
Preference number: 1 (lower is better)
Translates to: RQSIQNDSCCTTSPW*QVLEIGLRITIAIG
Trigger: ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 90 bp CAAAGACAAAGCATTCAGAATGATTCATGCTGCACCACCTCCCCCTaGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATT +
Preference number: 1 (lower is better)
Translates to: QRQSIQNDSCCTTSP*WQVLEIGLRITIAI
Trigger: AATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 90 bp CGTTTCTTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTaGTACCCGTGGTCTCCAGATACGCATAGCTTCCTTACTCTTCCA +
Preference number: 1 (lower is better)
Translates to: RFFRNIRVQNVSLQL*YPWSPDTHSFLTLP
Trigger: TGGAAGAGTAAGGAAGCTATGCGTATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAAGAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR CCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGGTCAGTCTTCAACTGTaGTACCCGTGGTCTCCAGAT +
Preference number: 2 (lower is better)
Translates to: PLRLLQTQRNVASQMPALVSLQL*YPWSPD
Trigger: ATCTGGAGACCACGGGTACCACAGTTGAAGACTGAC...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTACCACCTCCCCCTGGTaGCAGGTTCTGGAAATTGGC +
Preference number: 2 (lower is better)
Translates to: CTTSPWWQVLEIGLRITITTSPW*QVLEIG
Trigger: GCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGT...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR TCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGAAGACAATGCTTTGGATaGTGCCAAGGGCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: AMVGGSLELRSELGNIVRRQCFG*CQGQCG
Trigger: GCCACACTGCCCTTGGCATCATCCAAAGCATTGTCT...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR TCA 90 bp AAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCCCTGCGGCTACAAAGCATTCAGAATaGTTCATGCTGCACCACCTC +
Preference number: 2 (lower is better)
Translates to: KCNPDGLTLGWHSPTPAATKHSE*FMLHHL
Trigger: GAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGT...AGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR TCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGCCCAGTTACTTCCTCTaGGATGGTAACAGCAATAGG +
Preference number: 2 (lower is better)
Translates to: PLRLLQTQRNVASQMPALPSYFL*DGNSNR
Trigger: CCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGG...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp AGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCGAAAAGGGCAAGGCATaGCTCACATACTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: RPWKCNPDGLTLGWHSPTEKGKA*LTYSQP
Trigger: TGGCTGAGAGTATGTGAGCCATGCCTTGCCCTTTTC...GGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTCAACTGTGGTACCCGTaGTCTCCAGATACGCATAGC +
Preference number: 2 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIQLWYP*SPDTHS
Trigger: GCTATGCGTATCTGGAGACCACGGGTACCACAGTTG...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGAGAAAAGGGCAAGGCATaGCTCACATACTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: AMVGGSLELRSELGNIVREKGKA*LTYSQP
Trigger: TGGCTGAGAGTATGTGAGCCATGCCTTGCCCTTTTC...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR GCA 90 bp TCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTAGCCACGGCCTGGCATaGTGCAGCTCCAAAATCAGA +
Preference number: 2 (lower is better)
Translates to: SPWWQVLEIGLRITIAIGSHGLA*CSSKIR
Trigger: TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCT...ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAACTCTCAGCCACGGCCTaGCATGCTGCAGCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKLSATA*HAAAPK
Trigger: TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAG...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGAAGACTCAGAGGAATGTaGCAAGTCAGATGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: AMVGGSLELRSELGNIVRRLRGM*QVRCQL
Trigger: AAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCT...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR TCA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTTTGGTGTTCGTCTTTTaGAATTCGGTCCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASLVFVF*NSVPGL
Trigger: AAGGCCTGGGACCGAATTTCAAAAGACGAACACCAA...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR GCA 90 bp CAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAACTGGAAGTTAAGGACTaGTCAAAAGAAAATGCAGTG +
Preference number: 2 (lower is better)
Translates to: QGMAHILSATAWHAAAPKLEVKD*SKENAV
Trigger: CACTGCATTTTCTTTTGAGCAGTCCTTAACTTCCAG...TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR CCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATCTCTCAGCCACGGCCTaGCATGCTGCAGCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHLSATA*HAAAPK
Trigger: TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAG...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCCAAGTCTCCCCACTaGATAGACGAAAGAAGATAC +
Preference number: 2 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIAKSPH*IDERRY
Trigger: GTATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGC...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR TCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATCTCCATCCACTTCCCTaGGCCTCAGAAAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHLHPLP*ASEKGK
Trigger: CTTGCCCTTTTCTGAGGCTCAGGGAAGTGGATGGAG...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR TCA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGAGTAACCCCGATGGACTaGCTCTGGGCTGGCATTCTC +
Preference number: 2 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGVTPMD*LWAGIL
Trigger: GAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTAC...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR GCA 90 bp CACCTCTTTAGGTCCACAATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTAGCCACGGCCTGGCATaGTGCAGCTCCAAAATCAGA +
Preference number: 2 (lower is better)
Translates to: HLFRSTIEERHYVLQHRLSHGLA*CSSKIR
Trigger: TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCT...AAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTATTGTGGACCTAAAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR GCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATGGCAGTGTGGCTCTTTaGCTCTTGTCCTTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHGSVAL*LLSLLP
Trigger: GGGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCC...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR GCA 90 bp ATGACCAAGATTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGCAGAATGATTCATGCTaGACCACCTCCCCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: MTKIPTTLWEAERSESNTQNDSC*TTSPWW
Trigger: CCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTG...CGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAATCTTGGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGAGCAGGTTCTGGAAATTaGCTTGAGGATAACTATTGC +
Preference number: 2 (lower is better)
Translates to: AMVGGSLELRSELGNIVRAGSGN*LEDNYC
Trigger: GCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGC...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CAA 90 bp TGTACAAGATCTTGGTGTTCGTCTTTTGAAATTCGGTCCCAGGCCTaGGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACTGGATAGAC +
Preference number: 2 (lower is better)
Translates to: CTRSWCSSFEIRSQA*GKACMFAKSPHWID
Trigger: GTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR TCA 90 bp ATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCAGACAATGCTTTGGATaGTGCCAAGGGCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: IEERHYVLQHRLSCCLSSRQCFG*CQGQCG
Trigger: GCCACACTGCCCTTGGCATCATCCAAAGCATTGTCT...GCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATCAACTGTGGTACCCGTaGTCTCCAGATACGCATAGC +
Preference number: 2 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHQLWYP*SPDTHS
Trigger: GCTATGCGTATCTGGAGACCACGGGTACCACAGTTG...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp CCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCACACAAAACCAGGACCTaGTGTCAACCAGACAATGCT +
Preference number: 2 (lower is better)
Translates to: PLVAGSGNWLEDNYCNWSHKTRT*CQPDNA
Trigger: AGCATTGTCTGGTTGACACCAGGTCCTGGTTTTGTG...TGACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTCTTCAGGTACCTTTCTaGAAGTTAAGGACTGCTCAA +
Preference number: 2 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASLQVPF*KLRTAQ
Trigger: TTGAGCAGTCCTTAACTTCCAGAAAGGTACCTGAAG...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR GCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAATTTGCCTCTTGTCCTTaGTTCCCCACCTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKFASCP*FPTSLG
Trigger: ACCTAAAGAGGTGGGGAAGCAAGGACAAGAGGCAAA...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR TCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATACGGCCATTACATAGATaGAGGCAGCAGACCTTGGAA +
Preference number: 2 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIRPLHR*RQQTLE
Trigger: TTCCAAGGTCTGCTGCCTTCATCTATGTAATGGCCG...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp ATGACCAAGATTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGCACAAAACCAGGACCTaGTGTCAACCAGACAATGCT +
Preference number: 2 (lower is better)
Translates to: MTKIPTTLWEAERSESNTHKTRT*CQPDNA
Trigger: AGCATTGTCTGGTTGACACCAGGTCCTGGTTTTGTG...CGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAATCTTGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATATTCGGTCCCAGGCCTTaGGCAAAGCTTGTATGTTTG +
Preference number: 2 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIFGPRP*AKLVCL
Trigger: CAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAA...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR GCA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGATTTGCCTCTTGTCCTTaGTTCCCCACCTCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGFASCP*FPTSLG
Trigger: ACCTAAAGAGGTGGGGAAGCAAGGACAAGAGGCAAA...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR GCA 90 bp GACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCTCCATCCACTTGTCTCTCAATATCCTaGAACCATTCCAACATGTCA +
Preference number: 2 (lower is better)
Translates to: DTMFFSTVFPVVSLAPSTCLSIS*NHSNMS
Trigger: TGACATGTTGGAATGGTTGCAGGATATTGAGAGACA...AGTGGATGGAGCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR TCA 90 bp ACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTCCAGATACAAAAGAAAATGCAGTaGCTTTCGATAATGTCTCTC +
Preference number: 2 (lower is better)
Translates to: TSGFRMSVFNCGTRGLQIQKKMQ*LSIMSL
Trigger: GAGAGACATTATCGAAAGTCACTGCATTTTCTTTTG...TATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR CAA 90 bp AAACATTCAATAGGATATCTTGTACAAGATCTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCTTGGGCAAAGCTTGTATGTTTGCCA +
Preference number: 2 (lower is better)
Translates to: KHSIGYLVQDLGVRL*KFGPRPWAKLVCLP
Trigger: TGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGATATCCTATTGAATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR TCA 72 bp AAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTaGCTCTGGGCTGGCATTCTCCCACCCCTGCGGCTA +
Preference number: 3 (lower is better)
Translates to: KAADLGNVTPMD*LWAGILPPLRL
Trigger: TAGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp CCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTaGCATTCTCCCACCCCTGCGGCTACTCCAGACTCA +
Preference number: 3 (lower is better)
Translates to: PWKCNPDGLTLG*HSPTPAATPDS
Trigger: TGAGTCTGGAGTAGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR GCA 72 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTaGAGCTCCAAAATCAGACATCTAGGCGCTAATCCT +
Preference number: 3 (lower is better)
Translates to: HGSHTLSHGLAC*SSKIRHLGANP
Trigger: AGGATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR GCA 72 bp AGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATaGTGCAGCTCCAAAATCAGACATCTAGGCGCTAAT +
Preference number: 3 (lower is better)
Translates to: RHGSHTLSHGLA*CSSKIRHLGAN
Trigger: ATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR TCA 72 bp AACCAGGACCTGGTGTCAACCAGACAATGCTTTGGATaGTGCCAAGGGCAGTGTGGCTCTTTGCCTCTTGTC +
Preference number: 3 (lower is better)
Translates to: NQDLVSTRQCFG*CQGQCGSLPLV
Trigger: GACAAGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGGTCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CAA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTGCAAAGCTTGTATGTTaGCCAAGTCTCCCCACTGGA +
Preference number: 3 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASAKLVC*PSLPTG
Trigger: TCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGC...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR CCA 72 bp ACAAAACCAGGACCTGGTGTCAACCAGACAATGCTTTaGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCT +
Preference number: 3 (lower is better)
Translates to: TKPGPGVNQTML*MMPRAVWLFAS
Trigger: AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGGTCCTGGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CAA 90 bp CCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCAGGCCTTGGGCAAAGCTaGTATGTTTGCCAAGTCTCC +
Preference number: 3 (lower is better)
Translates to: PLVAGSGNWLEDNYCNWSGLGQS*YVCQVS
Trigger: GGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCC...TGACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR GCA 72 bp GGAACACTTCAAAGACAAAGCATTCAGAATGATTCATaGTGCACCACCTCCCCCTGGTGGCAGGTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: GTLQRQSIQNDS*CTTSPWWQVLE
Trigger: TTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGTCTTTGAAGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp AGCATTCAGAATGATTCATGCTGCACCACCTCCCCCTaGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACT +
Preference number: 3 (lower is better)
Translates to: SIQNDSCCTTSP*WQVLEIGLRIT
Trigger: AGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp CTTGGTGTTCGTCTTTTGAAATTCGGTCCCAGGCCTTaGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACT +
Preference number: 3 (lower is better)
Translates to: LGVRLLKFGPRP*AKLVCLPSLPT
Trigger: AGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR CAA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGCAGTGTGGCTCTTaGCCTCTTGTCCTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIGQCGS*PLVLAS
Trigger: GGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCCC...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR-3UTR CAA 90 bp TCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTATTCGGTCCCAGGCCTaGGGCAAAGCTTGTATGTTT +
Preference number: 3 (lower is better)
Translates to: SPWWQVLEIGLRITIAIGIRSQA*GKACMF
Trigger: AAACATACAAGCTTTGCCCAAGGCCTGGGACCGAAT...ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR GCA 72 bp AATTCGGTCCCAGGCCTTGGGCAAAGCTTGTATGTTTaGCAAGTCTCCCCACTGGATAGACGAAAGAAGATA +
Preference number: 3 (lower is better)
Translates to: NSVPGLGQSLYV*QVSPLDRRKKI
Trigger: TATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR CCA 72 bp AGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTaGTCTCCAGATACGCATAGCTTCCTTACTCTTCCA +
Preference number: 3 (lower is better)
Translates to: RVQNVSLQLWYP*SPDTHSFLTLP
Trigger: TGGAAGAGTAAGGAAGCTATGCGTATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR CAA 90 bp TTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTCTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: FRNIRVQNVSLQLWYPWSLGVRL*KFGPRP
Trigger: AGGCCTGGGACCGAATTTCAAAAGACGAACACCAAG...AGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR GCA 72 bp ACACTTCAAAGACAAAGCATTCAGAATGATTCATGCTaGACCACCTCCCCCTGGTGGCAGGTTCTGGAAATT +
Preference number: 3 (lower is better)
Translates to: TLQRQSIQNDSC*TTSPWWQVLEI
Trigger: AATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGTCTTTGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp CTGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTaGCTTGAGGATAACTATTGCAATTGGTCAAAATTT +
Preference number: 3 (lower is better)
Translates to: LHHLPLVAGSGN*LEDNYCNWSKF
Trigger: AAATTTTGACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp ATTCAGAATGATTCATGCTGCACCACCTCCCCCTGGTaGCAGGTTCTGGAAATTGGCTTGAGGATAACTATT +
Preference number: 3 (lower is better)
Translates to: IQNDSCCTTSPW*QVLEIGLRITI
Trigger: AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp AGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTaGTACCCGTGGTCTCCAGATACGCATAGCTTCCTT +
Preference number: 3 (lower is better)
Translates to: RNIRVQNVSLQL*YPWSPDTHSFL
Trigger: AAGGAAGCTATGCGTATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR TCA 72 bp CATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTaGGATGGTAACAGCAATAGGGGAACACTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: HFRSLTMPSYFL*DGNSNRGTLQR
Trigger: TCTTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR CCA 72 bp TTGGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACTaGATAGACGAAAGAAGATACTTTCTCTTCAGGTAC +
Preference number: 3 (lower is better)
Translates to: LGKACMFAKSPH*IDERRYFLFRY
Trigger: GTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR-3UTR CAA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGAGTTCTGGAAATTGGCTaGAGGATAACTATTGCAATT +
Preference number: 3 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGVLEIG*RITIAI
Trigger: AATTGCAATAGTTATCCTCAAGCCAATTTCCAGAAC...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
3UTR TCA 72 bp ATATCTATACCCTTTACTAAGTCCCTTTACATTCAATaGCCAAGATTCCCACAACACTCTGGGAAGCTGAAA +
Preference number: 3 (lower is better)
Translates to: ISIPFTKSLYIQ*PRFPQHSGKLK
Trigger: TTTCAGCTTCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGGGTATAGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGCAGTCCTGTCTCCCCTaGCCGAGGCTGCCGGTCGCC +
Preference number: 4 (lower is better)
Translates to: PLRLLQTQRNVASQMPALQSCLP*PRLPVA
Trigger: GGCGACCGGCAGCCTCGGGCAGGGGAGACAGGACTG...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAACCCCGAAGTTCGGCCTaGGGAGCTTGGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QGMAHILSATAWHAAAPKPRSSA*GAWGPE
Trigger: CTCAGGGCCCCAAGCTCCTCAGGCCGAACTTCGGGG...TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR CCA 90 bp CAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAAGAGGACAGGAGGGGCTaGCAGTCCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: QGMAHILSATAWHAAAPKEDRRG*QSRRAL
Trigger: GAGTGCCCTGCGGGACTGCCAGCCCCTCCTGTCCTC...TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp AAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCCCTGCGGCTTTCTTCAGCGCCTCCTaGACGGCAAGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: KCNPDGLTLGWHSPTPAAFFSAS*TASRGR
Trigger: CCGGCCTCTGCTTGCCGTGCAGGAGGCGCTGAAGAA...AGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTGCCACAGGCCCTGCTaGTCCTCCACCACGGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHCHRPC*SSTTGK
Trigger: CTTCCCCGTGGTGGAGGAGCAGCAGGGCCTGTGGCA...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAAGGACTGACTCTGGGCTaGCATTCTCCCACCCCTGCG +
Preference number: 4 (lower is better)
Translates to: QGMAHILSATAWHAAAPKGLTLG*HSPTPA
Trigger: CGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCC...TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GGCATTCTCCCACCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGACCACCTCCCCCTGGTaGCAGGTTCTGGAAATTGGC +
Preference number: 4 (lower is better)
Translates to: GILPPLRLLQTQRNVASQTTSPW*QVLEIG
Trigger: GCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGT...CTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGGTGGGAGAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp GGCATTCTCCCACCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGCTCCATCCACTTCCCTaGGCCTCAGAAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GILPPLRLLQTQRNVASQLHPLP*ASEKGK
Trigger: CTTGCCCTTTTCTGAGGCTCAGGGAAGTGGATGGAG...CTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGGTGGGAGAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTTGCCACAGGCCCTGCTaGTCCTCCACCACGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CTTSPWWQVLEIGLRITICHRPC*SSTTGK
Trigger: CTTCCCCGTGGTGGAGGAGCAGCAGGGCCTGTGGCA...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGCTCTCAGCCACGGCCTaGCATGCTGCAGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PLRLLQTQRNVASQMPALLSATA*HAAAPK
Trigger: TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAG...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGAAGCAGCCGCCAACCCTaGAGCAGAATCCTACAGCCG +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRSSRQP*SRILQP
Trigger: CGGCTGTAGGATTCTGCTCCAGGGTTGGCGGCTGCT...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR TCA 90 bp AGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCGTAACCCCGATGGACTaGCTCTGGGCTGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: RPWKCNPDGLTLGWHSPTVTPMD*LWAGIL
Trigger: GAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTAC...GGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGAGCCACGGCCTGGCATaGTGCAGCTCCAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: PLRLLQTQRNVASQMPALSHGLA*CSSKIR
Trigger: TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCT...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CCTGGTGTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGGACTGACTCTGGGCTaGCATTCTCCCACCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PGVNQTMLWMMPRAVWLFGLTLG*HSPTPA
Trigger: CGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCC...AAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CCTGGTGTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTCAGACAGCCAAAGCGTaGGAACCCTCCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: PGVNQTMLWMMPRAVWLFQTAKA*EPSRDC
Trigger: GCAGTCCCTGGAGGGTTCTCACGCTTTGGCTGTCTG...AAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358011.8
CDS-3UTR TCA 90 bp AAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCCCTGCGGCTTCTCAGCACAACTCTTaGGCAATCCAACCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: KCNPDGLTLGWHSPTPAASQHNS*AIQPRS
Trigger: ACTTCGGGGTTGGATTGCTCAAGAGTTGTGCTGAGA...AGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGAGATAGGGCAGTCTCCTaGTTCAGAGGATTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRDRAVS*FRGFLA
Trigger: CGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATC...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGAACCACCTCCCCCTGGTaGCAGGTTCTGGAAATTGGC +
Preference number: 4 (lower is better)
Translates to: AMVGGSLELRSELGNIVRTTSPW*QVLEIG
Trigger: GCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGT...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGACCCTCGGCTACTCAGTaGCAGCCAGGCCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: AMVGGSLELRSELGNIVRPSATQ*QPGQKE
Trigger: TTCTTTCTGGCCTGGCTGCCACTGAGTAGCCGAGGG...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR TCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCGCCGTCTCTTCTCTaGCATACAGTCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIAPSLL*HTVLSP
Trigger: GGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGC...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAAGTTCCGCCAGGTTGCTaGGGGAGGACAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKVPPGC*GRTGGA
Trigger: AGCCCCTCCTGTCCTCCCTCAGCAACCTGGCGGAAC...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TGCTGCAGCTCCAAAATCAGACATCTAGGCGCTAATCCTCCCCAAGACCCAGTCCCATGTCTCGCACCTTaGGGAGGATGGCTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CCSSKIRHLGANPPQDPVPCLAP*GGWLAF
Trigger: AAAGGCTAGCCATCCTCCTCAAGGTGCGAGACATGG...GACTGGGTCTTGGGGAGGATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358011.8
CDS-3UTR GCA 90 bp TGCTGCAGCTCCAAAATCAGACATCTAGGCGCTAATCCTCCCCAAGACCCAGTCGATAGGGCAGTCTCCTaGTTCAGAGGATTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: CCSSKIRHLGANPPQDPVDRAVS*FRGFLA
Trigger: CGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATC...GACTGGGTCTTGGGGAGGATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGACTCACTGCTGAAGGCTaGAGGACAGCATCAATGCCA +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRLTAEG*RTASMP
Trigger: TGGCATTGATGCTGTCCTGCAGCCTTCAGCAGTGAG...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TGCTGCAGCTCCAAAATCAGACATCTAGGCGCTAATCCTCCCCAAGACCCAGTCAGCCACGGCCTGGCATaGTGCAGCTCCAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: CCSSKIRHLGANPPQDPVSHGLA*CSSKIR
Trigger: TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCT...GACTGGGTCTTGGGGAGGATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp GACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCTCCATCCACTAAACCGCAGGTTCTGTaGGGCCTGCAGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: DTMFFSTVFPVVSLAPSTKPQVL*GLQLFR
Trigger: GCGGAACAGCTGCAGGCCGCACAGAACCTGCGGTTT...AGTGGATGGAGCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGAATTCAGAATGATTCATaGTGCACCACCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRIQNDS*CTTSPW
Trigger: CCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAAT...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGAGGACAGGAGGGGCTaGCAGTCCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIEDRRG*QSRRAL
Trigger: GAGTGCCCTGCGGGACTGCCAGCCCCTCCTGTCCTC...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATGAAAAGGGCAAGGCATaGCTCACATACTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHEKGKA*LTYSQP
Trigger: TGGCTGAGAGTATGTGAGCCATGCCTTGCCCTTTTC...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp AGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCGAAGGCAGCAGACCTTaGAAATGTAACCCCGATGGA +
Preference number: 4 (lower is better)
Translates to: RPWKCNPDGLTLGWHSPTEGSRP*KCNPDG
Trigger: TCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC...GGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGTTCCGCCAGGTTGCTaGGGGAGGACAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIVPPGC*GRTGGA
Trigger: AGCCCCTCCTGTCCTCCCTCAGCAACCTGGCGGAAC...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATCCCAGTTACTTCCTCTaGGATGGTAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHPSYFL*DGNSNR
Trigger: CCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGG...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATGAACCCTCCAGGGACTaGACCACGCGCCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHEPSRD*TTRPQS
Trigger: AGACTGTGGGCGCGTGGTGCAGTCCCTGGAGGGTTC...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358011.8
CDS-3UTR GCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAATCACCAGCCACCAGCTaGTTACGCCTCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKSPATS*LRLSRS
Trigger: AGAGCGGCTGAGGCGTAAGCAGCTGGTGGCTGGTGA...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358011.8
CDS-3UTR GCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGAATGCCAACTGTGTCTaGGTGTTGCTCATAGATCTG +
Preference number: 4 (lower is better)
Translates to: PLRLLQTQRNVASQMPALNANCV*VLLIDL
Trigger: CAGATCTATGAGCAACACGCAGACACAGTTGGCATT...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTTTGCCTCTTGTCCTTaGTTCCCCACCTCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHFASCP*FPTSLG
Trigger: ACCTAAAGAGGTGGGGAAGCAAGGACAAGAGGCAAA...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp GTCAGTCTTCAACTGTGGTACCCGTGGTCTCCAGATACGCATAGCTTCCTTACTCAGAATGATTCATGCTaGACCACCTCCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSLQLWYPWSPDTHSFLTQNDSC*TTSPWW
Trigger: CCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTG...AGTAAGGAAGCTATGCGTATCTGGAGACCACGGGTACCACAGTTGAAGACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp AGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCTTAGGAGTCTCACCATaGCCAGTTACTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPWKCNPDGLTLGWHSPTLGVSP*PVTSSE
Trigger: CTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAA...GGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GCTATGGTGGGAGGATCCCTTGAGCTCAGGAGTGAGCTGGGCAATATAGTGAGAGAAGGCAGCAGACCTTaGAAATGTAACCCCGATGGA +
Preference number: 4 (lower is better)
Translates to: AMVGGSLELRSELGNIVREGSRP*KCNPDG
Trigger: TCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC...TCTCACTATATTGCCCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp ATGACCAAGATTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGCCATGTCTCGCACCTTaGGGAGGATGGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MTKIPTTLWEAERSESNTPCLAP*GGWLPQ
Trigger: CTGAGGCAGCCATCCTCCTCAAGGTGCGAGACATGG...CGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAATCTTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp ATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCAGGTTCTGTGCGGCCTaGAGCTGTTCCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: IEERHYVLQHRLSCCLSSRFCAA*SCSARL
Trigger: CAACCTGGCGGAACAGCTGCAGGCCGCACAGAACCT...GCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp ATGACCAAGATTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGAAACCGCAGGTTCTGTaGGGCCTGCAGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: MTKIPTTLWEAERSESNTKPQVL*GLQLFR
Trigger: GCGGAACAGCTGCAGGCCGCACAGAACCTGCGGTTT...CGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAATCTTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTTTCGGTCCCAGGCCTTaGGCAAAGCTTGTATGTTTG +
Preference number: 4 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASFGPRP*AKLVCL
Trigger: CAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAA...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GCCTTGGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACTGGATAGACGAAAGACAACTGTGGTACCCGTaGTCTCCAGATACGCATAGC +
Preference number: 4 (lower is better)
Translates to: ALGKACMFAKSPHWIDERQLWYP*SPDTHS
Trigger: GCTATGCGTATCTGGAGACCACGGGTACCACAGTTG...TCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR CCA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTGTCAGTCTTCAACTGTaGTACCCGTGGTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASVSLQL*YPWSPD
Trigger: ATCTGGAGACCACGGGTACCACAGTTGAAGACTGAC...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAAGCAGGTTCTGGAAATTaGCTTGAGGATAACTATTGC +
Preference number: 4 (lower is better)
Translates to: QGMAHILSATAWHAAAPKAGSGN*LEDNYC
Trigger: GCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGC...TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CCCCTGCGGCTACTCCAGACTCAGAGGAATGTGGCAAGTCAGATGCCAGCTTTGGTATTTCCAATATTTTaGGAGGCTATGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLRLLQTQRNVASQMPALVFPIF*EAMVGG
Trigger: TCCTCCCACCATAGCCTCCCAAAATATTGGAAATAC...CAAAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCTGGAGTAGCCGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TGCTGCAGCTCCAAAATCAGACATCTAGGCGCTAATCCTCCCCAAGACCCAGTCACAAAGCATTCAGAATaGTTCATGCTGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: CCSSKIRHLGANPPQDPVTKHSE*FMLHHL
Trigger: GAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGT...GACTGGGTCTTGGGGAGGATTAGCGCCTAGATGTCTGATTTTGGAGCTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCCCTTTACATTCAATaGCCAAGATTCCCACAACAC +
Preference number: 4 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHSLYIQ*PRFPQH
Trigger: GTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGA...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCACTCACTGCTGAAGGCTaGAGGACAGCATCAATGCCA +
Preference number: 4 (lower is better)
Translates to: PLVAGSGNWLEDNYCNWSLTAEG*RTASMP
Trigger: TGGCATTGATGCTGTCCTGCAGCCTTCAGCAGTGAG...TGACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTAACCAGACAATGCTTTaGATGATGCCAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASNQTML*MMPRAV
Trigger: CACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTT...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTCACAAAACCAGGACCTaGTGTCAACCAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIHKTRT*CQPDNA
Trigger: AGCATTGTCTGGTTGACACCAGGTCCTGGTTTTGTG...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGAGCAGGTTCTGGAAATTaGCTTGAGGATAACTATTGC +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRAGSGN*LEDNYC
Trigger: GCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGC...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CAAGACCCAGTCCTAAGGTTCAAGGCACTGATGTTTCAAATATGTCAGACTGAAGCGCCGTCTCTTCTCTaGCATACAGTCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QDPVLRFKALMFQICQTEAPSLL*HTVLSP
Trigger: GGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGC...TTCAGTCTGACATATTTGAAACATCAGTGCCTTGAACCTTAGGACTGGGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp ATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCCTCCATCCACTTCCCTaGGCCTCAGAAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: IEERHYVLQHRLSCCLSSLHPLP*ASEKGK
Trigger: CTTGCCCTTTTCTGAGGCTCAGGGAAGTGGATGGAG...GCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CAAGACCCAGTCCTAAGGTTCAAGGCACTGATGTTTCAAATATGTCAGACTGAAGTAACCCCGATGGACTaGCTCTGGGCTGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: QDPVLRFKALMFQICQTEVTPMD*LWAGIL
Trigger: GAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTAC...TTCAGTCTGACATATTTGAAACATCAGTGCCTTGAACCTTAGGACTGGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCGGCCATTACATAGATaGAGGCAGCAGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SPWWQVLEIGLRITIAIGRPLHR*RQQTLE
Trigger: TTCCAAGGTCTGCTGCCTTCATCTATGTAATGGCCG...ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp ACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTCCAGATACGGCCATTACATAGATaGAGGCAGCAGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TSGFRMSVFNCGTRGLQIRPLHR*RQQTLE
Trigger: TTCCAAGGTCTGCTGCCTTCATCTATGTAATGGCCG...TATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTAATGCCAACTGTGTCTaGGTGTTGCTCATAGATCTG +
Preference number: 4 (lower is better)
Translates to: CTTSPWWQVLEIGLRITINANCV*VLLIDL
Trigger: CAGATCTATGAGCAACACGCAGACACAGTTGGCATT...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGATGTCTCTCAATATCCTaGAACCATTCCAACATGTCA +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRCLSIS*NHSNMS
Trigger: TGACATGTTGGAATGGTTGCAGGATATTGAGAGACA...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTCAAAGCTTGTATGTTTaGCAAGTCTCCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIQSLYV*QVSPLD
Trigger: ATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTG...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TCTTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTGGCAGTGTGGCTCTTTaGCTCTTGTCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLETSGFRMSVFNCGTRGGSVAL*LLSLLP
Trigger: GGGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCC...ACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATCAGAATGATTCATGCTaGACCACCTCCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHQNDSC*TTSPWW
Trigger: CCACCAGGGGGAGGTGGTGCAGCATGAATCATTCTG...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAATCAGAAGGAGCAGTGGCTCATaGCTGTATTTCCAATATTTT +
Preference number: 4 (lower is better)
Translates to: HGSHTLSHGLACCSSKIRRSSGS*LYFQYF
Trigger: AAAATATTGGAAATACAGGCATGAGCCACTGCTCCT...TCTGATTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGCTTCAGAGGATTCCTaGCGTCCAAGCGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIASEDS*RPSAVS
Trigger: AGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGC...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CAAGACCCAGTCCTAAGGTTCAAGGCACTGATGTTTCAAATATGTCAGACTGAAGCTTCAGAGGATTCCTaGCGTCCAAGCGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QDPVLRFKALMFQICQTEASEDS*RPSAVS
Trigger: AGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGC...TTCAGTCTGACATATTTGAAACATCAGTGCCTTGAACCTTAGGACTGGGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp ACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTCCAGATATTCGGTCCCAGGCCTTaGGCAAAGCTTGTATGTTTG +
Preference number: 4 (lower is better)
Translates to: TSGFRMSVFNCGTRGLQIFGPRP*AKLVCL
Trigger: CAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAA...TATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATACTCTCAGCCACGGCCTaGCATGCTGCAGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAILSATA*HAAAPK
Trigger: TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAG...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp GACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCTCCATCCACTTTGGTGTTCGTCTTTTaGAATTCGGTCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: DTMFFSTVFPVVSLAPSTLVFVF*NSVPGL
Trigger: AAGGCCTGGGACCGAATTTCAAAAGACGAACACCAA...AGTGGATGGAGCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTAGACAATGCTTTGGATaGTGCCAAGGGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FRNIRVQNVSLQLWYPWSRQCFG*CQGQCG
Trigger: GCCACACTGCCCTTGGCATCATCCAAAGCATTGTCT...AGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TCTTGTACAAGATCTTGGTGTTCGTCTTTTGAAATTCGGTCCCAGGCCTTGGGCCCCAGTTACTTCCTCTaGGATGGTAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: SCTRSWCSSFEIRSQALGPSYFL*DGNSNR
Trigger: CCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGG...GCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAAGCAGGACAGCATCAATaGCAACTGTGTCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKAGQHQ*QLCLRV
Trigger: AACACGCAGACACAGTTGGCATTGATGCTGTCCTGC...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp GCCTTGGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACTGGATAGACGAAAGACAAAGCTTGTATGTTTaGCAAGTCTCCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: ALGKACMFAKSPHWIDERQSLYV*QVSPLD
Trigger: ATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTG...TCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp GACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCTCCATCCACTTTAGGAGTCTCACCATaGCCAGTTACTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DTMFFSTVFPVVSLAPSTLGVSP*PVTSSE
Trigger: CTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAA...AGTGGATGGAGCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp TCTTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCAACTGTGGTACCCGTaGTCTCCAGATACGCATAGC +
Preference number: 4 (lower is better)
Translates to: SLETSGFRMSVFNCGTRGQLWYP*SPDTHS
Trigger: GCTATGCGTATCTGGAGACCACGGGTACCACAGTTG...ACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCAAACCAGACAATGCTTTaGATGATGCCAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLVAGSGNWLEDNYCNWSNQTML*MMPRAV
Trigger: CACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTT...TGACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp TCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCACAAAACCAGGACCTaGTGTCAACCAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: SPWWQVLEIGLRITIAIGHKTRT*CQPDNA
Trigger: AGCATTGTCTGGTTGACACCAGGTCCTGGTTTTGTG...ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp TCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTAGACTCAGAGGAATGTaGCAAGTCAGATGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPWWQVLEIGLRITIAIGRLRGM*QVRCQL
Trigger: AAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCT...ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTCAAGGATTCAGGTATTaGCAAAAGACACAAAACCAG +
Preference number: 4 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIQGFRY*QKTQNQ
Trigger: CTGGTTTTGTGTCTTTTGTCAATACCTGAATCCTTG...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp AAAGAAAATGCAGTGACTTTCGATAATGTCTCTCAATATCCTGCAACCATTCCAAGGTTCTGTGCGGCCTaGAGCTGTTCCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KENAVTFDNVSQYPATIPRFCAA*SCSARL
Trigger: CAACCTGGCGGAACAGCTGCAGGCCGCACAGAACCT...TGGAATGGTTGCAGGATATTGAGAGACATTATCGAAAGTCACTGCATTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp TCTCCCCACTGGATAGACGAAAGAAGATACTTTCTCTTCAGGTACCTTTCTGGAGCAGGACAGCATCAATaGCAACTGTGTCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: SPHWIDERRYFLFRYLSGAGQHQ*QLCLRV
Trigger: AACACGCAGACACAGTTGGCATTGATGCTGTCCTGC...TCCAGAAAGGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp TCTTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTATTCAGAATGATTCATaGTGCACCACCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLETSGFRMSVFNCGTRGIQNDS*CTTSPW
Trigger: CCAGGGGGAGGTGGTGCAGCATGAATCATTCTGAAT...ACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp GTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCCTCTAGGAGCAGTGGCTCATaGCTGTATTTCCAATATTTT +
Preference number: 4 (lower is better)
Translates to: VNQTMLWMMPRAVWLFASRSSGS*LYFQYF
Trigger: AAAATATTGGAAATACAGGCATGAGCCACTGCTCCT...AGAGGCAAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CACCTCTTTAGGTCCACAATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTGTCAGTCTTCAACTGTaGTACCCGTGGTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: HLFRSTIEERHYVLQHRLVSLQL*YPWSPD
Trigger: ATCTGGAGACCACGGGTACCACAGTTGAAGACTGAC...AAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTATTGTGGACCTAAAGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp TTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTGAAAAGGGCAAGGCATaGCTCACATACTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FRNIRVQNVSLQLWYPWSEKGKA*LTYSQP
Trigger: TGGCTGAGAGTATGTGAGCCATGCCTTGCCCTTTTC...AGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTTCCCTTTACATTCAATaGCCAAGATTCCCACAACAC +
Preference number: 4 (lower is better)
Translates to: SPWWQVLEIGLRITIAIGSLYIQ*PRFPQH
Trigger: GTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGA...ACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp TCTCCCCACTGGATAGACGAAAGAAGATACTTTCTCTTCAGGTACCTTTCTGGATTTGCCTCTTGTCCTTaGTTCCCCACCTCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: SPHWIDERRYFLFRYLSGFASCP*FPTSLG
Trigger: ACCTAAAGAGGTGGGGAAGCAAGGACAAGAGGCAAA...TCCAGAAAGGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR CCA 90 bp CACCTCTTTAGGTCCACAATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTAGACTCAGAGGAATGTaGCAAGTCAGATGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HLFRSTIEERHYVLQHRLRLRGM*QVRCQL
Trigger: AAGCTGGCATCTGACTTGCCACATTCCTCTGAGTCT...AAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTATTGTGGACCTAAAGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGCAATTGGTCAGTATTTCCAATATTTTaGGAGGCTATGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLVAGSGNWLEDNYCNWSVFPIF*EAMVGG
Trigger: TCCTCCCACCATAGCCTCCCAAAATATTGGAAATAC...TGACCAATTGCAATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGATTGGTGTTCGTCTTTTaGAATTCGGTCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGLVFVF*NSVPGL
Trigger: AAGGCCTGGGACCGAATTTCAAAAGACGAACACCAA...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATACAAAGCATTCAGAATaGTTCATGCTGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHTKHSE*FMLHHL
Trigger: GAGGTGGTGCAGCATGAATCATTCTGAATGCTTTGT...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGCCAAGTCTCCCCACTaGATAGACGAAAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIAKSPH*IDERRY
Trigger: GTATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGC...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAACTTCAGGTACCTTTCTaGAAGTTAAGGACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKLQVPF*KLRTAQ
Trigger: TTGAGCAGTCCTTAACTTCCAGAAAGGTACCTGAAG...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
3UTR CAA 72 bp ATAGGATATCTTGTACAAGATCTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCTTGGGCAAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: IGYLVQDLGVRL*KFGPRPWAKLV
Trigger: TACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGATATCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR TCA 90 bp CACCTCTTTAGGTCCACAATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTCAAGGATTCAGGTATTaGCAAAAGACACAAAACCAG +
Preference number: 4 (lower is better)
Translates to: HLFRSTIEERHYVLQHRLQGFRY*QKTQNQ
Trigger: CTGGTTTTGTGTCTTTTGTCAATACCTGAATCCTTG...AAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTATTGTGGACCTAAAGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR TCA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAACAAAAGAAAATGCAGTaGCTTTCGATAATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKQKKMQ*LSIMSL
Trigger: GAGAGACATTATCGAAAGTCACTGCATTTTCTTTTG...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR GCA 90 bp TCTTTAGAAACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTTGTCTCTCAATATCCTaGAACCATTCCAACATGTCA +
Preference number: 4 (lower is better)
Translates to: SLETSGFRMSVFNCGTRGCLSIS*NHSNMS
Trigger: TGACATGTTGGAATGGTTGCAGGATATTGAGAGACA...ACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTTTCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR GCA 90 bp CAAGACCCAGTCCTAAGGTTCAAGGCACTGATGTTTCAAATATGTCAGACTGAACTGGAAGTTAAGGACTaGTCAAAAGAAAATGCAGTG +
Preference number: 4 (lower is better)
Translates to: QDPVLRFKALMFQICQTELEVKD*SKENAV
Trigger: CACTGCATTTTCTTTTGAGCAGTCCTTAACTTCCAG...TTCAGTCTGACATATTTGAAACATCAGTGCCTTGAACCTTAGGACTGGGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS GCA 90 bp GACAGGAGGGGCTGGCAGTCCCGCAGGGCACTCTGCCACAGGCCCTaGTGCTCCTCCACCACGGGGAAGCACTTCTTCAGCGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: DRRGWQSRRALCHRP*CSSTTGKHFFSASC
Trigger: GCAGGAGGCGCTGAAGAAGTGCTTCCCCGTGGTGGAGGAGCAGCAGGGCCTGTGGCAGAGTGCCCTGCGGGACTGCCAGCCCCTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000477060.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000491981.5
ENST00000494120.1
CDS GCA 90 bp TGGGAAGGCCCGAAGCGCCGGCACATCCTCAAACCGCAGGTTCTGTaGGGCCTGCAGCTGTTCCGCCAGGTTGCTGAGGGAGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: WEGPKRRHILKPQVL*GLQLFRQVAEGGQE
Trigger: CTCCTGTCCTCCCTCAGCAACCTGGCGGAACAGCTGCAGGCCGCACAGAACCTGCGGTTTGAGGATGTGCCGGCGCTTCGGGCCTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000477060.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000491981.5
ENST00000494120.1
CDS GCA 90 bp GCGTCCAAGCGCCGTCTCTTCTCTGACATACAGTCCTGTCTCCCCTaGCCGAGGCTGCCGGTCGCCTTCCCGAAGTTCGGCCTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ASKRRLFSDIQSCLP*PRLPVAFPKFGLRS
Trigger: GCTCCTCAGGCCGAACTTCGGGAAGGCGACCGGCAGCCTCGGGCAGGGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGCTTGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488137.5
CDS GCA 90 bp GCGTCCAAGCGCCGTCTCTTCTCTGACATACAGTCCTGTCTCCCCTaGCCGAGGCTGCCGGTCGCCTTCCCGTCAAGAGCTCGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: ASKRRLFSDIQSCLP*PRLPVAFPSRARRS
Trigger: AGACCGGCGAGCTCTTGACGGGAAGGCGACCGGCAGCCTCGGGCAGGGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGCTTGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS TCA 90 bp CTCCTGCTTCAGAGGATTCCTGGCGTCCAAGCGCCGTCTCTTCTCTaGCATACAGTCCTGTCTCCCCTGCCCGAGGCTGCCGGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: LLLQRIPGVQAPSLL*HTVLSPLPEAAGRL
Trigger: AAGGCGACCGGCAGCCTCGGGCAGGGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000494120.1
CDS TCA 90 bp CTCCTGCTTCAGAGGATTCCTGGCGTCCAAGCGCCGTCTCTTCTCTaGCATACAGTCCTGTCTCCCCTGCCCGAGGCTGCCGGTCGCTTG +
Preference number: 5 (lower is better)
Translates to: LLLQRIPGVQAPSLL*HTVLSPLPEAAGRL
Trigger: CAAGCGACCGGCAGCCTCGGGCAGGGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619962.1
CDS TCA 90 bp AAGCACTTCTTCAGCGCCTCCTGCACGGCAAGCAGAGGCCGGTCTTaGGTCATCTTCTGCTCAGGTGATCCGCCCGCCTCGGTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: KHFFSASCTASRGRS*VIFCSGDPPASVFQ
Trigger: TTGGAAGACCGAGGCGGGCGGATCACCTGAGCAGAAGATGACTCAAGACCGGCCTCTGCTTGCCGTGCAGGAGGCGCTGAAGAAGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464085.5
ENST00000488137.5
CDS TCA 90 bp GAAAGAAGCAGCCGCCAACCCTGGAGCAGAATCCTACAGCCGACCTaGCCTAGTAGGCCCCCAGCCCTCCAGAGCTTGGGGTATTGCAGA +
Preference number: 5 (lower is better)
Translates to: ERSSRQPWSRILQPT*PSRPPALQSLGYCR
Trigger: TCTGCAATACCCCAAGCTCTGGAGGGCTGGGGGCCTACTAGGTCAGGTCGGCTGTAGGATTCTGCTCCAGGGTTGGCGGCTGCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000488137.5
ENST00000498448.1
ENST00000619962.1
CDS GCA 90 bp CCCTGGTTTCCCCTCGGGAAGGGTAACCTGGATAGGGCAGTCTCCTaGTTCAGAGGATTCCTGGCGTCCAAGCGCCGTCTCTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PWFPLGKGNLDRAVS*FRGFLASKRRLFSD
Trigger: GTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGGTTACCCTTCCCGAGGGGAAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000619962.1
CDS-3UTR CAA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATAGCTGTTCCGCCAGGTaGCTGAGGGAGGACAGGAGG +
Preference number: 5 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHSCSAR*LREDRR
Trigger: CCTCCTGTCCTCCCTCAGCAACCTGGCGGAACAGCT...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS GCA 90 bp AGCCTTTCCCCTAGCTTGTCCAGGACGATGTCACCAGCCACCAGCTaGTTACGCCTCAGCCGCTCTTTTAAATCTGGGAAGGCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: SLSPSLSRTMSPATS*LRLSRSFKSGKARS
Trigger: GCTTCGGGCCTTCCCAGATTTAAAAGAGCGGCTGAGGCGTAAGCAGCTGGTGGCTGGTGACATCGTCCTGGACAAGCTAGGGGAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000477060.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000491981.5
CDS CCA 90 bp CAGCTTTCTGAAGGAGACCCTGGTTTCCCCTCGGGAAGGGTAACCTaGATAGGGCAGTCTCCTGCTTCAGAGGATTCCTGGCGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: QLSEGDPGFPSGRVT*IGQSPASEDSWRPS
Trigger: GCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGGTTACCCTTCCCGAGGGGAAACCAGGGTCTCCTTCAGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000619962.1
CDS CCA 90 bp GGAAGGGTAACCTGGATAGGGCAGTCTCCTGCTTCAGAGGATTCCTaGCGTCCAAGCGCCGTCTCTTCTCTGACATACAGTCCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GRVTWIGQSPASEDS*RPSAVSSLTYSPVS
Trigger: GGAGACAGGACTGTATGTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGGTTACCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000619962.1
CDS GCA 90 bp GTCCCCAAGCTCGCTGGTGCCCATCAGGAGCCTGCTTGGCACCTTTaGTTATTTCTTCGATTGTTCCTCAACTCAGAGGGGGAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: VPKLAGAHQEPAWHL*LFLRLFLNSEGERQ
Trigger: TTGCCTCTCCCCCTCTGAGTTGAGGAACAATCGAAGAAATAAGCAAAGGTGCCAAGCAGGCTCCTGATGGGCACCAGCGAGCTTGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS CCA 90 bp CTTGCCAGGACTTCTATGCTTGGACTGCTCTGTCCCCAAGCTCGCTaGTGCCCATCAGGAGCCTGCTTGGCACCTTTGCTTATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: LARTSMLGLLCPQAR*CPSGACLAPLLISS
Trigger: CGAAGAAATAAGCAAAGGTGCCAAGCAGGCTCCTGATGGGCACCAGCGAGCTTGGGGACAGAGCAGTCCAAGCATAGAAGTCCTGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS TCA 90 bp ATCCTGCAACCATTCCAACATGTCAGCCACAGAGGGGCTCACTGCTaGAGGCTGCAGGACAGCATCAATGCCAACTGTGTCTGCGTGTTG +
Preference number: 5 (lower is better)
Translates to: ILQPFQHVSHRGAHC*RLQDSINANCVCVL
Trigger: CAACACGCAGACACAGTTGGCATTGATGCTGTCCTGCAGCCTTCAGCAGTGAGCCCCTCTGTGGCTGACATGTTGGAATGGTTGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000464178.1
ENST00000486637.2
ENST00000491981.5
ENST00000494120.1
CDS GCA 90 bp CAGCCACAGAGGGGCTCACTGCTGAAGGCTGCAGGACAGCATCAATaGCAACTGTGTCTGCGTGTTGCTCATAGATCTGAAACACTCGCT +
Preference number: 5 (lower is better)
Translates to: QPQRGSLLKAAGQHQ*QLCLRVAHRSETLA
Trigger: AGCGAGTGTTTCAGATCTATGAGCAACACGCAGACACAGTTGGCATTGATGCTGTCCTGCAGCCTTCAGCAGTGAGCCCCTCTGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000464178.1
ENST00000477060.1
ENST00000486637.2
ENST00000491981.5
ENST00000494120.1
CDS-3UTR CAA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATGGCCTTGGGCAAAGCTaGTATGTTTGCCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHGLGQS*YVCQVS
Trigger: GGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCC...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CCTGGTGTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTAGCCTTTCCCCTAGCTaGTCCAGGACGATGTCACCA +
Preference number: 5 (lower is better)
Translates to: PGVNQTMLWMMPRAVWLFSLSPS*SRTMSP
Trigger: TGGTGACATCGTCCTGGACAAGCTAGGGGAAAGGCT...AAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358011.8
CDS-3UTR CAA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATATTCGGTCCCAGGCCTaGGGCAAAGCTTGTATGTTT +
Preference number: 5 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHIRSQA*GKACMF
Trigger: AAACATACAAGCTTTGCCCAAGGCCTGGGACCGAAT...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp AAATGTAACCCCGATGGACTGACTCTGGGCTGGCATTCTCCCACCCCTGCGGCTTGTATTTCCAATATTTaGGGAGGCTATGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: KCNPDGLTLGWHSPTPAACISNI*GGYGGR
Trigger: CCTCCCACCATAGCCTCCCAAAATATTGGAAATACA...AGCCGCAGGGGTGGGAGAATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CAAGGCATGGCTCACATACTCTCAGCCACGGCCTGGCATGCTGCAGCTCCAAAAAACTGTGTCTGCGTGTaGCTCATAGATCTGAAACAC +
Preference number: 5 (lower is better)
Translates to: QGMAHILSATAWHAAAPKNCVCV*LIDLKH
Trigger: GTGTTTCAGATCTATGAGCAACACGCAGACACAGTT...TTTTGGAGCTGCAGCATGCCAGGCCGTGGCTGAGAGTATGTGAGCCATGCCTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp TGCACCACCTCCCCCTGGTGGCAGGTTCTGGAAATTGGCTTGAGGATAACTATTGGCCTTGGGCAAAGCTaGTATGTTTGCCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: CTTSPWWQVLEIGLRITIGLGQS*YVCQVS
Trigger: GGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCC...AATAGTTATCCTCAAGCCAATTTCCAGAACCTGCCACCAGGGGGAGGTGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGAAGCTGTTCCGCCAGGTaGCTGAGGGAGGACAGGAGG +
Preference number: 5 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGSCSAR*LREDRR
Trigger: CCTCCTGTCCTCCCTCAGCAACCTGGCGGAACAGCT...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp GAAGGCAGCAGACCTTGGAAATGTAACCCCGATGGACTGACTCTGGGCTGGCATAACTGTGTCTGCGTGTaGCTCATAGATCTGAAACAC +
Preference number: 5 (lower is better)
Translates to: EGSRPWKCNPDGLTLGWHNCVCV*LIDLKH
Trigger: GTGTTTCAGATCTATGAGCAACACGCAGACACAGTT...ATGCCAGCCCAGAGTCAGTCCATCGGGGTTACATTTCCAAGGTCTGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CCTGGTGTCAACCAGACAATGCTTTGGATGATGCCAAGGGCAGTGTGGCTCTTTGCAAAGCTTGTATGTTaGCCAAGTCTCCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: PGVNQTMLWMMPRAVWLFAKLVC*PSLPTG
Trigger: TCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGC...AAAGAGCCACACTGCCCTTGGCATCATCCAAAGCATTGTCTGGTTGACACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp GTCAGTCTTCAACTGTGGTACCCGTGGTCTCCAGATACGCATAGCTTCCTTACTGTCTCAGCACAACTCTaGAGCAATCCAACCCCGAAG +
Preference number: 5 (lower is better)
Translates to: VSLQLWYPWSPDTHSFLTVSAQL*SNPTPK
Trigger: CTTCGGGGTTGGATTGCTCAAGAGTTGTGCTGAGAC...AGTAAGGAAGCTATGCGTATCTGGAGACCACGGGTACCACAGTTGAAGACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR CAA 90 bp AACATCAGGGTTCAGAATGTCAGTCTTCAACTGTGGTACCCGTGGTCTCCAGATAAGCAGAGGCCGGTCTaGAGTCATCTTCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: NIRVQNVSLQLWYPWSPDKQRPV*SHLLDR
Trigger: CCTATCCAGAAGATGACTCAAGACCGGCCTCTGCTT...ATCTGGAGACCACGGGTACCACAGTTGAAGACTGACATTCTGAACCCTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CACCTCTTTAGGTCCACAATAGAGGAAAGACACTATGTTCTTCAGCACCGTCTTGGGCAGTGTGGCTCTTaGCCTCTTGTCCTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: HLFRSTIEERHYVLQHRLGQCGS*PLVLAS
Trigger: GGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCCC...AAGACGGTGCTGAAGAACATAGTGTCTTTCCTCTATTGTGGACCTAAAGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATATGGTGGGAGGATCCCTaGAGCTCAGGAGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIWWEDP*SSGVSW
Trigger: CCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCA...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGATGGTGGGAGGATCCCTaGAGCTCAGGAGTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGWWEDP*SSGVSW
Trigger: CCAGCTCACTCCTGAGCTCAAGGGATCCTCCCACCA...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp ATGACCAAGATTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGACCATGTCTCGCACCTaGAGGAGGATGGCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: MTKIPTTLWEAERSESNTTMSRT*RRMAAS
Trigger: TGAGGCAGCCATCCTCCTCAAGGTGCGAGACATGGT...CGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAATCTTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS TCA 90 bp CTTAAACACAACCCCTCTGACATGGCTTCAGACCGCATCCACAGGTaGAAAGCACCAAATCCAAACAATCAGGCCACAAACCCGTCAAGA +
Preference number: 5 (lower is better)
Translates to: LKHNPSDMASDRIHR*KAPNPNNQATNPSR
Trigger: TCTTGACGGGTTTGTGGCCTGATTGTTTGGATTTGGTGCTTTTCACCTGTGGATGCGGTCTGAAGCCATGTCAGAGGGGTTGTGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS-3UTR CAA 90 bp TTCCCACAACACTCTGGGAAGCTGAAAGATCTGAAAGTAACACGGCCATTACATACCATGTCTCGCACCTaGAGGAGGATGGCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: FPQHSGKLKDLKVTRPLHTMSRT*RRMASL
Trigger: AAGGCTAGCCATCCTCCTCAAGGTGCGAGACATGGT...ATGTAATGGCCGTGTTACTTTCAGATCTTTCAGCTTCCCAGAGTGTTGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358011.8
CDS-3UTR CAA 90 bp GACACTATGTTCTTCAGCACCGTCTTTCCTGTTGTCTCTCTAGCTCCATCCACTCTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: DTMFFSTVFPVVSLAPSTLGVRL*KFGPRP
Trigger: AGGCCTGGGACCGAATTTCAAAAGACGAACACCAAG...AGTGGATGGAGCTAGAGAGACAACAGGAAAGACGGTGCTGAAGAACATAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CAAGACCCAGTCCTAAGGTTCAAGGCACTGATGTTTCAAATATGTCAGACTGAAGGGCAGTGTGGCTCTTaGCCTCTTGTCCTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QDPVLRFKALMFQICQTEGQCGS*PLVLAS
Trigger: GGAAGCAAGGACAAGAGGCAAAGAGCCACACTGCCC...TTCAGTCTGACATATTTGAAACATCAGTGCCTTGAACCTTAGGACTGGGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS CCA 90 bp TCCCAGGCCTTGGGCAAAGCTTGTATGTTTGCCAAGTCTCCCCACTaGATAGACGAAAGAAGATACTTTCTCTTCAGGTACGACTTTCGA +
Preference number: 5 (lower is better)
Translates to: SQALGKACMFAKSPH*IDERRYFLFRYDFR
Trigger: TCGAAAGTCGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358011.8
ENST00000464085.5
ENST00000486637.2
ENST00000491981.5
CDS CCA 90 bp GGAGACACAAAGGAAGAACACAAACCAGTACCTTGTACAAGATCTTaGTGTTCGTCTTTTGAAATTCGGTCCCAGGCCTTGGGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: GDTKEEHKPVPCTRS*CSSFEIRSQALGKA
Trigger: AGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGGTACTGGTTTGTGTTCTTCCTTTGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS-3UTR CAA 90 bp CCTTTACTAAGTCCCTTTACATTCAATGACCAAGATTCCCACAACACTCTGGGAAAGCAGAGGCCGGTCTaGAGTCATCTTCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: PLLSPFTFNDQDSHNTLGKQRPV*SHLLDR
Trigger: CCTATCCAGAAGATGACTCAAGACCGGCCTCTGCTT...TCCCAGAGTGTTGTGGGAATCTTGGTCATTGAATGTAAAGGGACTTAGTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAATTCGGTCCCAGGCCTaGGGCAAAGCTTGTATGTTT +
Preference number: 5 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIIRSQA*GKACMF
Trigger: AAACATACAAGCTTTGCCCAAGGCCTGGGACCGAAT...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATACTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAILGVRL*KFGPRP
Trigger: AGGCCTGGGACCGAATTTCAAAAGACGAACACCAAG...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS-3UTR CAA 90 bp CCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGGGGAACACTTCAAATGTATTTCCAATATTTaGGGAGGCTATGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PCPVTSSEMVTAIGEHFKCISNI*GGYGGR
Trigger: CCTCCCACCATAGCCTCCCAAAATATTGGAAATACA...TTTGAAGTGTTCCCCTATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS TCA 90 bp AGAACACAAACCAGTACCTTGTACAAGATCTTGGTGTTCGTCTTTTaGAATTCGGTCCCAGGCCTTGGGCAAAGCTTGTATGTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: RTQTSTLYKILVFVF*NSVPGLGQSLYVCQ
Trigger: TTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGGTACTGGTTTGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CCA 90 bp GGCTTTGTGCTACAGGGAAAGAGGAATGAAACCATCCCTGAAATCTaGGATCTCAGCATGGTGAGGACAAAATCAGATCCTGAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GFVLQGKRNETIPEI*DLSMVRTKSDPEKK
Trigger: TTTCTTTTCAGGATCTGATTTTGTCCTCACCATGCTGAGATCCCAGATTTCAGGGATGGTTTCATTCCTCTTTCCCTGTAGCACAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CCA 90 bp CCACTGGATAGACGAAAGAAGATACTTTCTCTTCAGGTACCTTTCTaGAAGTTAAGGACTGCTCAAAAGAAAATGCAGTATGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: PLDRRKKILSLQVPF*KLRTAQKKMQYAEV
Trigger: CACTTCAGCATACTGCATTTTCTTTTGAGCAGTCCTTAACTTCCAGAAAGGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS-3UTR CAA 90 bp TCTCCCCACTGGATAGACGAAAGAAGATACTTTCTCTTCAGGTACCTTTCTGGAGTTCTGGAAATTGGCTaGAGGATAACTATTGCAATT +
Preference number: 5 (lower is better)
Translates to: SPHWIDERRYFLFRYLSGVLEIG*RITIAI
Trigger: AATTGCAATAGTTATCCTCAAGCCAATTTCCAGAAC...TCCAGAAAGGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS-3UTR CAA 90 bp ATTTTAGGAGTCTCACCATGCCCAGTTACTTCCTCTGAGATGGTAACAGCAATAGTTCTGGAAATTGGCTaGAGGATAACTATTGCAATT +
Preference number: 5 (lower is better)
Translates to: ILGVSPCPVTSSEMVTAIVLEIG*RITIAI
Trigger: AATTGCAATAGTTATCCTCAAGCCAATTTCCAGAAC...TATTGCTGTTACCATCTCAGAGGAAGTAACTGGGCATGGTGAGACTCCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS GCA 72 bp GCCGGCACATCCTCAAACCGCAGGTTCTGTGCGGCCTaGAGCTGTTCCGCCAGGTTGCTGAGGGAGGACAGG +
Preference number: 6 (lower is better)
Translates to: AGTSSNRRFCAA*SCSARLLREDR
Trigger: CCTGTCCTCCCTCAGCAACCTGGCGGAACAGCTGCAGGCCGCACAGAACCTGCGGTTTGAGGATGTGCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000477060.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000491981.5
ENST00000494120.1
CDS GCA 72 bp CCGAAGCGCCGGCACATCCTCAAACCGCAGGTTCTGTaGGGCCTGCAGCTGTTCCGCCAGGTTGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: PKRRHILKPQVL*GLQLFRQVAEG
Trigger: TCCCTCAGCAACCTGGCGGAACAGCTGCAGGCCGCACAGAACCTGCGGTTTGAGGATGTGCCGGCGCTTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000477060.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000491981.5
ENST00000494120.1
CDS GCA 72 bp TCTCTGACATACAGTCCTGTCTCCCCTGCCCGAGGCTaGCGGTCGCCTTCCCGTCAAGAGCTCGCCGGTCTG +
Preference number: 6 (lower is better)
Translates to: SLTYSPVSPARG*RSPSRQELAGL
Trigger: CAGACCGGCGAGCTCTTGACGGGAAGGCGACCGGCAGCCTCGGGCAGGGGAGACAGGACTGTATGTCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS TCA 72 bp TTCAGCGCCTCCTGCACGGCAAGCAGAGGCCGGTCTTaGGTCATCTTCTCAGGTGATCCGCCCGCCTCGGTC +
Preference number: 6 (lower is better)
Translates to: FSASCTASRGRS*VIFSGDPPASV
Trigger: GACCGAGGCGGGCGGATCACCTGAGAAGATGACTCAAGACCGGCCTCTGCTTGCCGTGCAGGAGGCGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461359.5
ENST00000491797.1
ENST00000619962.1
CDS TCA 72 bp CAGAGGATTCCTGGCGTCCAAGCGCCGTCTCTTCTCTaGCATACAGTCCTGTCTCCCCTGCCCGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: QRIPGVQAPSLL*HTVLSPLPEAA
Trigger: GGCAGCCTCGGGCAGGGGAGACAGGACTGTATGTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000494120.1
ENST00000619962.1
CDS GCA 72 bp CCCCTCGGGAAGGGTAACCTGGATAGGGCAGTCTCCTaGTTCAGAGGATTCCTGGCGTCCAAGCGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: PLGKGNLDRAVS*FRGFLASKRRL
Trigger: GAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGGTTACCCTTCCCGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000619962.1
CDS GCA 72 bp CCGGTCTTGAGTCATCTTCTGGATAGGGCAGTCTCCTaGTTCAGAGGATTCCTGGCGTCCAAGCGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: PVLSHLLDRAVS*FRGFLASKRRL
Trigger: GAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGAAGATGACTCAAGACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS CCA 72 bp ACTTCTATGCTTGGACTGCTCTGTCCCCAAGCTCGCTaGTGCCCATCAGGAGCCTGCTTGGCACCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: TSMLGLLCPQAR*CPSGACLAPLL
Trigger: AAGCAAAGGTGCCAAGCAGGCTCCTGATGGGCACCAGCGAGCTTGGGGACAGAGCAGTCCAAGCATAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS CAA 90 bp TGTCCCCAAGCTCGCTGGTGCCCATCAGGAGCCTGCTTGGCACCTTaGCTTATTTCTTCGATTGTTCCTCAACTCAGAGGGGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: CPQARWCPSGACLAP*LISSIVPQLRGGEA
Trigger: TGCCTCTCCCCCTCTGAGTTGAGGAACAATCGAAGAAATAAGCAAAGGTGCCAAGCAGGCTCCTGATGGGCACCAGCGAGCTTGGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS TCA 72 bp AAGCGGAAAAACTTAAAAGTCCAGACAGCCAAAGCGTaGGAACCCTCCAGGGACTGCACCACGCGCCCACAG +
Preference number: 6 (lower is better)
Translates to: KRKNLKVQTAKA*EPSRDCTTRPQ
Trigger: CTGTGGGCGCGTGGTGCAGTCCCTGGAGGGTTCTCACGCTTTGGCTGTCTGGACTTTTAAGTTTTTCCGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000486637.2
CDS GCA 72 bp CCTAGCTTGTCCAGGACGATGTCACCAGCCACCAGCTaGTTACGCCTCAGCCGCTCTTTTAAATCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: PSLSRTMSPATS*LRLSRSFKSGK
Trigger: CTTCCCAGATTTAAAAGAGCGGCTGAGGCGTAAGCAGCTGGTGGCTGGTGACATCGTCCTGGACAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000464178.1
ENST00000477060.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000491981.5
CDS CCA 72 bp ACCTGGATAGGGCAGTCTCCTGCTTCAGAGGATTCCTaGCGTCCAAGCGCCGTCTCTTCTCTGACATACAGT +
Preference number: 6 (lower is better)
Translates to: TWIGQSPASEDS*RPSAVSSLTYS
Trigger: ACTGTATGTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461359.5
ENST00000464085.5
ENST00000472584.1
ENST00000486637.2
ENST00000488137.5
ENST00000491797.1
ENST00000619962.1
CDS CAA 72 bp ACTCGCTCCACATGGCTGCTGACCATGTCTCGCACCTaGAGGAGGATGGCTGCCTCAGCCGCTCTTTTAAAT +
Preference number: 6 (lower is better)
Translates to: TRSTWLLTMSRT*RRMAASAALLN
Trigger: ATTTAAAAGAGCGGCTGAGGCAGCCATCCTCCTCAAGGTGCGAGACATGGTCAGCAGCCATGTGGAGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494120.1
CDS GCA 72 bp CTCGCTGGTGCCCATCAGGAGCCTGCTTGGCACCTTTaGTTATTTCTTCGATTGTTCCTCAACTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: LAGAHQEPAWHL*LFLRLFLNSEG
Trigger: CCCCTCTGAGTTGAGGAACAATCGAAGAAATAAGCAAAGGTGCCAAGCAGGCTCCTGATGGGCACCAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS CCA 72 bp TTCTGGATAGGGCAGTCTCCTGCTTCAGAGGATTCCTaGCGTCCAAGCGCCGTCTCTTCTCTGACATACAGT +
Preference number: 6 (lower is better)
Translates to: FWIGQSPASEDS*RPSAVSSLTYS
Trigger: ACTGTATGTCAGAGAAGAGACGGCGCTTGGACGCCAGGAATCCTCTGAAGCAGGAGACTGCCCTATCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358011.8
ENST00000494120.1
CDS GCA 72 bp AGGGGCTCACTGCTGAAGGCTGCAGGACAGCATCAATaGCAACTGTGTCTGCGTGTTGCTCATAGATCTGAA +
Preference number: 6 (lower is better)
Translates to: RGSLLKAAGQHQ*QLCLRVAHRSE
Trigger: TTCAGATCTATGAGCAACACGCAGACACAGTTGGCATTGATGCTGTCCTGCAGCCTTCAGCAGTGAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000464178.1
ENST00000477060.1
ENST00000486637.2
ENST00000491981.5
ENST00000494120.1
CDS CAA 90 bp GGTGCCCATCAGGAGCCTGCTTGGCACCTTTGCTTATTTCTTCGATaGTTCCTCAACTCAGAGGGGGAGAGGCAAGATTATCACTCCCAT +
Preference number: 6 (lower is better)
Translates to: GAHQEPAWHLCLFLR*FLNSEGERQDYHSH
Trigger: ATGGGAGTGATAATCTTGCCTCTCCCCCTCTGAGTTGAGGAACAATCGAAGAAATAAGCAAAGGTGCCAAGCAGGCTCCTGATGGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS CAA 72 bp CTGCAGGACAGCATCAATGCCAACTGTGTCTGCGTGTaGCTCATAGATCTGAAACACTCGCTCCACATGGCT +
Preference number: 6 (lower is better)
Translates to: LQDSINANCVCV*LIDLKHSLHMA
Trigger: AGCCATGTGGAGCGAGTGTTTCAGATCTATGAGCAACACGCAGACACAGTTGGCATTGATGCTGTCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358011.8
ENST00000461359.5
ENST00000464085.5
ENST00000464178.1
ENST00000477060.1
ENST00000486637.2
ENST00000491981.5
ENST00000494120.1
CDS CCA 72 bp AATTCAGGGAAAGCAAATCTTCCAGTCTGCTCAGCATaGACGCCACATGGAGAGCAGTCAGAAAGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: NSGKANLPVCSA*TPHGEQSERLK
Trigger: TTTCAGCCTTTCTGACTGCTCTCCATGTGGCGTCCATGCTGAGCAGACTGGAAGATTTGCTTTCCCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CAA 72 bp CAGGAGCCTGCTTGGCACCTTTGCTTATTTCTTCGATaGTTCCTCAACTCAGAGGGGGAGAGGCAAGATTAT +
Preference number: 6 (lower is better)
Translates to: QEPAWHLCLFLR*FLNSEGERQDY
Trigger: ATAATCTTGCCTCTCCCCCTCTGAGTTGAGGAACAATCGAAGAAATAAGCAAAGGTGCCAAGCAGGCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498448.1
CDS TCA 72 bp ACCAGTACCTTGTACAAGATCTTGGTGTTCGTCTTTTaGAATTCGGTCCCAGGCCTTGGGCAAAGCTTGTAT +
Preference number: 6 (lower is better)
Translates to: TSTLYKILVFVF*NSVPGLGQSLY
Trigger: ATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGGTACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CCA 72 bp CTACAGGGAAAGAGGAATGAAACCATCCCTGAAATCTaGGATCTCAGCATGGTGAGGACAAAATCAGATCCT +
Preference number: 6 (lower is better)
Translates to: LQGKRNETIPEI*DLSMVRTKSDP
Trigger: AGGATCTGATTTTGTCCTCACCATGCTGAGATCCCAGATTTCAGGGATGGTTTCATTCCTCTTTCCCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CAA 72 bp AACCAGTACCTTGTACAAGATCTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCTTGGGCAAAGCTTGTA +
Preference number: 6 (lower is better)
Translates to: NQYLVQDLGVRL*KFGPRPWAKLV
Trigger: TACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGGTACTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CAA 90 bp AAGAACACAAACCAGTACCTTGTACAAGATCTTGGTGTTCGTCTTTaGAAATTCGGTCCCAGGCCTTGGGCAAAGCTTGTATGTTTGCCA +
Preference number: 6 (lower is better)
Translates to: KNTNQYLVQDLGVRL*KFGPRPWAKLVCLP
Trigger: TGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGGTACTGGTTTGTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS CAA 72 bp CAAATATTTCCTGAGCAACTGTTTACTAACATGGCTTaGTGCTACAGGGAAAGAGGAATGAAACCATCCCTG +
Preference number: 6 (lower is better)
Translates to: QIFPEQLFTNMA*CYRERGMKPSL
Trigger: CAGGGATGGTTTCATTCCTCTTTCCCTGTAGCACAAAGCCATGTTAGTAAACAGTTGCTCAGGAAATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609516.1
CDS TCA 72 bp ATGAAACCATCCCTGAAATCTGGGATCTCAGCATGGTaGGGACAAAATCAGATCCTGAAAAGAAAGAACAAA +
Preference number: 6 (lower is better)
Translates to: MKPSLKSGISAW*GQNQILKRKNK
Trigger: TTTGTTCTTTCTTTTCAGGATCTGATTTTGTCCTCACCATGCTGAGATCCCAGATTTCAGGGATGGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609516.1