Pregenerated sensors for C1GALT1C1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171155Ensembl transcript IDs: ENST00000304661.6, ENST00000371313.2, ENST00000673177.1, ENST00000673568.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGACTGACTTTAATGTGTaGTTATACCAGTGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: FSCLVVHFEKANPLELGETDFNV*LYQCHQ Trigger: TTGGTGGCACTGGTATAACCACACATTAAAGTCAGT...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGGTGTGGTTATACCAGTaGCACCAAATTAGAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: FSCLVVHFEKANPLELGEVWLYQ*HQIRKE Trigger: TTCTTTTCTAATTTGGTGGCACTGGTATAACCACAC...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGACTGACTTTAATGTGTaGTTATACCAGTGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: FFSCLVVHFEKANPLELGTDFNV*LYQCHQ Trigger: TTGGTGGCACTGGTATAACCACACATTAAAGTCAGT...CCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGGCGTCTAGAACGGCTTaGGGACAGGAAAGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FSCLVVHFEKANPLELGEASRTA*GQESAA Trigger: GGCTGCGCTTTCCTGTCCCCAAGCCGTTCTAGACGC...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR TCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGACTCCGTTACGCTCCTaGCCAGGCTGTTCTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSCLVVHFEKANPLELGETPLRS*PGCSSC Trigger: GCAGCTAGAACAGCCTGGTCAGGAGCGTAACGGAGT...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCGCGTCTAGAACGGCTTaGGGACAGGAAAGCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRASRTA*GQESAA Trigger: GGCTGCGCTTTCCTGTCCCCAAGCCGTTCTAGACGC...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAGCGTCTAGAACGGCTTaGGGACAGGAAAGCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEASRTA*GQESAA Trigger: GGCTGCGCTTTCCTGTCCCCAAGCCGTTCTAGACGC...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAACTCCGTTACGCTCCTaGCCAGGCTGTTCTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKETPLRS*PGCSSC Trigger: GCAGCTAGAACAGCCTGGTCAGGAGCGTAACGGAGT...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR TCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGCTCGAAAGCTCTTACTaGGCTCCATGCGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCLVVHFEKANPLELGELESSY*APCAHP Trigger: AGGATGAGCGCATGGAGCTCAGTAAGAGCTTTCGAG...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCGGTTTCCTCTCACGTTaGCGCACCACTCCGTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRGFLSR*RTTPLR Trigger: GCGTAACGGAGTGGTGCGCCAACGTGAGAGGAAACC...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR GCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAACCAGGCTGTTCTAGCTaGAGGCGGTGTTCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEPGCSS*RRCSLV Trigger: AACGAGAGAACACCGCCTGCAGCTAGAACAGCCTGG...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR TCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAACTCGAAAGCTCTTACTaGGCTCCATGCGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKELESSY*APCAHP Trigger: AGGATGAGCGCATGGAGCTCAGTAAGAGCTTTCGAG...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCCTCGAAAGCTCTTACTaGGCTCCATGCGCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRLESSY*APCAHP Trigger: AGGATGAGCGCATGGAGCTCAGTAAGAGCTTTCGAG...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | TTCTTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAAAATATGCCCAAATaGCCTAAGGCGGTATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFSCLVVHFEKANPLELGENMPK*PKAVYP Trigger: GGGGTATACCGCCTTAGGGCATTTGGGCATATTTTC...CCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGAGAAGGCAAATCCATTaGAACTTGGGGAGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSCLVVHFEKANPLELGERRQIH*NLGRLR Trigger: TCTAAGCCTCCCCAAGTTCCAATGGATTTGCCTTCT...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR TCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGAAACCAATGCATCATTaGAAATATGCCCAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSCLVVHFEKANPLELGEKPMHH*KYAQMP Trigger: GGGCATTTGGGCATATTTTCAATGATGCATTGGTTT...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR GCA 90 bp | TTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGGAGTCCATCAGCATCTTCTaGATTTTCTGCAAATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSCLVVHFEKANPLELGESISIF*IFCKYS Trigger: GGAGTATTTGCAGAAAATGCAGAAGATGCTGATGGA...CTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAAGAAGGCAAATCCATTaGAACTTGGGGAGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKERRQIH*NLGRLR Trigger: TCTAAGCCTCCCCAAGTTCCAATGGATTTGCCTTCT...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR GCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCTGGAGAAGTTTGTTTTaGACTTCATCCGCGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRWRSLF*TSSASR Trigger: TCTAGACGCGGATGAAGTGCAAAACAAACTTCTCCA...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAATGGAGAAGTTTGTTTTaGACTTCATCCGCGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEWRSLF*TSSASR Trigger: TCTAGACGCGGATGAAGTGCAAAACAAACTTCTCCA...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAATCATCACATGCATCTaGTTTGGAGTCAGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEIITCI*FGVSPL Trigger: TAATGGACTGACTCCAAATCAGATGCATGTGATGAT...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCATCATCACATGCATCTaGTTTGGAGTCAGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRIITCI*FGVSPL Trigger: TAATGGACTGACTCCAAATCAGATGCATGTGATGAT...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAAAACCAATGCATCATTaGAAATATGCCCAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEKPMHH*KYAQMP Trigger: GGGCATTTGGGCATATTTTCAATGATGCATTGGTTT...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCAAACCAATGCATCATTaGAAATATGCCCAAATGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRKPMHH*KYAQMP Trigger: GGGCATTTGGGCATATTTTCAATGATGCATTGGTTT...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCTCCATCAGCATCTTCTaGATTTTCTGCAAATACTCC | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRSISIF*IFCKYS Trigger: GGAGTATTTGCAGAAAATGCAGAAGATGCTGATGGA...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAATCCATCAGCATCTTCTaGATTTTCTGCAAATACTCC | + |
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Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKESISIF*IFCKYS Trigger: GGAGTATTTGCAGAAAATGCAGAAGATGCTGATGGA...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCTTCAGGACACTTTTCTaGGATATTGAGAAGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRFRTLF*DIEKAV Trigger: AACAGCCTTCTCAATATCCCAGAAAAGTGTCCTGAA...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | TTCTTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGCACATGCATCTGATTTaGAGTCAGTCCATTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: FFSCLVVHFEKANPLELGHMHLI*SQSIKS Trigger: ACTTTTAATGGACTGACTCCAAATCAGATGCATGTG...CCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAACTGACTTTAATGTGTaGTTATACCAGTGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKETDFNV*LYQCHQ Trigger: TTGGTGGCACTGGTATAACCACACATTAAAGTCAGT...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCACTGACTTTAATGTGTaGTTATACCAGTGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRTDFNV*LYQCHQ Trigger: TTGGTGGCACTGGTATAACCACACATTAAAGTCAGT...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCCTTAGTTGTACATTTTaGGAAGGCAAATCCATTGGA | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRLSCTF*EGKSIG Trigger: TCCAATGGATTTGCCTTCTCAAAATGTACAACTAAG...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR TCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCGCTTCCAATGGAATCTaGTTACTGTTTGGTATAAAC | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRASNGI*LLFGIN Trigger: GTTTATACCAAACAGTAATCAGATTCCATTGGAAGC...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR TCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAGCTTCCAATGGAATCTaGTTACTGTTTGGTATAAAC | + |
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Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEASNGI*LLFGIN Trigger: GTTTATACCAAACAGTAATCAGATTCCATTGGAAGC...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCGTGTGGTTATACCAGTaGCACCAAATTAGAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRVWLYQ*HQIRKE Trigger: TTCTTTTCTAATTTGGTGGCACTGGTATAACCACAC...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAGTGTGGTTATACCAGTaGCACCAAATTAGAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEVWLYQ*HQIRKE Trigger: TTCTTTTCTAATTTGGTGGCACTGGTATAACCACAC...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR GCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCTATAAACTGGAACTTTaGAACAACTCCTCTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRYKLEL*NNSSME Trigger: CTCCATAGAGGAGTTGTTGCAAAGTTCCAGTTTATA...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCCACATGCATCTGATTTaGAGTCAGTCCATTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRHMHLI*SQSIKS Trigger: ACTTTTAATGGACTGACTCCAAATCAGATGCATGTG...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAAAATCCATTGGAACTTaGGGAGGCTTAGAACATAAA | + |
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Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEKSIGT*GGLEHK Trigger: TTTATGTTCTAAGCCTCCCCAAGTTCCAATGGATTT...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCAAATCCATTGGAACTTaGGGAGGCTTAGAACATAAA | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRKSIGT*GGLEHK Trigger: TTTATGTTCTAAGCCTCCCCAAGTTCCAATGGATTT...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CCA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCCTGTTTGGTATAAACTaGAACTTTGCAACAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRLFGIN*NFATTP Trigger: AGGAGTTGTTGCAAAGTTCCAGTTTATACCAAACAG...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR CCA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAACTGTTTGGTATAAACTaGAACTTTGCAACAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTTDFNVWLYQCHQIRKELFGIN*NFATTP Trigger: AGGAGTTGTTGCAAAGTTCCAGTTTATACCAAACAG...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS TCA 90 bp | CGCACGGGTTTCCTCTCACGTTGGCGCACCACTCCGTTACGCTCCTaGCCAGGCTGTTCTAGCTGCAGGCGGTGTTCTCTCGTTGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RTGFLSRWRTTPLRS*PGCSSCRRCSLVGL Trigger: GAGACCAACGAGAGAACACCGCCTGCAGCTAGAACAGCCTGGTCAGGAGCGTAACGGAGTGGTGCGCCAACGTGAGAGGAAACCCGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CAA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCGGGTTTCCTCTCACGTaGGCGCACCACTCCGTTACG | + |
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Preference number: 5 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRGFPLT*AHHSVT Trigger: CGTAACGGAGTGGTGCGCCAACGTGAGAGGAAACCC...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CAA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAAGGGTTTCCTCTCACGTaGGCGCACCACTCCGTTACG | + |
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Preference number: 5 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEGFPLT*AHHSVT Trigger: CGTAACGGAGTGGTGCGCCAACGTGAGAGGAAACCC...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS GCA 90 bp | AGCTTCCAATGGAATCTGATTACTGTTTGGTATAAACTGGAACTTTaGAACAACTCCTCTATGGAGAAGTTTGTTTTGCACTTCATCCGC | + |
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Preference number: 5 (lower is better) Translates to: SFQWNLITVWYKLEL*NNSSMEKFVLHFIR Trigger: GCGGATGAAGTGCAAAACAAACTTCTCCATAGAGGAGTTGTTGCAAAGTTCCAGTTTATACCAAACAGTAATCAGATTCCATTGGAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGACCACTTCTCAGTCATaGTCAGAACCATTTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: FFSCLVVHFEKANPLELGTTSQS*SEPFGG Trigger: ACCTCCAAATGGTTCTGACAATGACTGAGAAGTGGT...CCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CAA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCCCTCTATGGAGAAGTTaGTTTTGCACTTCATCCGCG | + |
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Preference number: 5 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRPLWRS*FCTSSA Trigger: CGCGGATGAAGTGCAAAACAAACTTCTCCATAGAGG...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR CAA 90 bp | TGTACTACTGACTTTAATGTGTGGTTATACCAGTGCCACCAAATTAGAAAAGAACCTCTATGGAGAAGTTaGTTTTGCACTTCATCCGCG | + |
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Preference number: 5 (lower is better) Translates to: CTTDFNVWLYQCHQIRKEPLWRS*FCTSSA Trigger: CGCGGATGAAGTGCAAAACAAACTTCTCCATAGAGG...TTCTTTTCTAATTTGGTGGCACTGGTATAACCACACATTAAAGTCAGTAGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTAGTTGCTTAGTTGTACATTTTGAGAAGGCAAATCCATTGGAACTTGGGCACTTTTCTGGGATATaGAGAAGGCTGTTAAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FFSCLVVHFEKANPLELGHFSGI*RRLLSL Trigger: AAGACTTAACAGCCTTCTCAATATCCCAGAAAAGTG...CCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGCAACTAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS-3UTR CAA 90 bp | GTTACTACTACAAATAATGACAACACACGTCCTATACAAAGATCATATTCACGCCACTTTTCTGGGATATaGAGAAGGCTGTTAAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: VTTTNNDNTRPIQRSYSRHFSGI*RRLLSL Trigger: AAGACTTAACAGCCTTCTCAATATCCCAGAAAAGTG...GCGTGAATATGATCTTTGTATAGGACGTGTGTTGTCATTATTTGTAGTAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS CAA 72 bp | CAGGAAAGCGCAGCCGCGCACGGGTTTCCTCTCACGTaGGCGCACCACTCCGTTACGCTCCTGACCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QESAAAHGFPLT*AHHSVTLLTRL Trigger: CAGCCTGGTCAGGAGCGTAACGGAGTGGTGCGCCAACGTGAGAGGAAACCCGTGCGCGGCTGCGCTTTCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS TCA 72 bp | TTCCTCTCACGTTGGCGCACCACTCCGTTACGCTCCTaGCCAGGCTGTTCTAGCTGCAGGCGGTGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSRWRTTPLRS*PGCSSCRRCSL Trigger: GAGAGAACACCGCCTGCAGCTAGAACAGCCTGGTCAGGAGCGTAACGGAGTGGTGCGCCAACGTGAGAGGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS CCA 72 bp | CTTTCAGAAAGCATTTTTCCCGCGTCTAGAACGGCTTaGGGACAGGAAAGCGCAGCCGCGCACGGGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSESIFPASRTA*GQESAAAHGFP Trigger: AGGAAACCCGTGCGCGGCTGCGCTTTCCTGTCCCCAAGCCGTTCTAGACGCGGGAAAAATGCTTTCTGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS CCA 72 bp | AGTTTGTTTTGCACTTCATCCGCGTCTAGAACGGCTTaGGGACAGGAAAGCGCAGCCGCGCACGGGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLFCTSSASRTA*GQESAAAHGFP Trigger: AGGAAACCCGTGCGCGGCTGCGCTTTCCTGTCCCCAAGCCGTTCTAGACGCGGATGAAGTGCAAAACAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS GCA 72 bp | AAATGCTTCCAAGCATCACACCCTTCAAAAAGGAGCTaGTTTCAGAAAGCATTTTTCCCGCGTCTAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: KCFQASHPSKRS*FQKAFFPRLER Trigger: CCGTTCTAGACGCGGGAAAAATGCTTTCTGAAAGCAGCTCCTTTTTGAAGGGTGTGATGCTTGGAAGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000304661.6 ENST00000673177.1 |
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| CDS CAA 72 bp | AACTGGAACTTTGCAACAACTCCTCTATGGAGAAGTTaGTTTTGCACTTCATCCGCGTCTAGAACGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: NWNFATTPLWRS*FCTSSASRTAW Trigger: CCAAGCCGTTCTAGACGCGGATGAAGTGCAAAACAAACTTCTCCATAGAGGAGTTGTTGCAAAGTTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS CCA 72 bp | TTTGGTATAAACTGGAACTTTGCAACAACTCCTCTATaGAGAAGTTTGTTTTGCACTTCATCCGCGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: FGINWNFATTPL*RSLFCTSSASR Trigger: TCTAGACGCGGATGAAGTGCAAAACAAACTTCTCCATAGAGGAGTTGTTGCAAAGTTCCAGTTTATACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371313.2 ENST00000673568.1 |
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| CDS CAA 72 bp | CAAGTCTCCTTTACTGCAGCCCAAAGACTCACATCTTaGGGTTTTACAAGGATAATACAGTATACTCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QVSFTAAQRLTS*GFTRIIQYTRK Trigger: CTTTCGAGTATACTGTATTATCCTTGTAAAACCCAAAGATGTGAGTCTTTGGGCTGCAGTAAAGGAGACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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| CDS CAA 90 bp | CCTATACAAAGATCATATTCACGCTTTTCTACCACTTCTCAGTCATaGTCAGAACCATTTGGAGGTAAGAAAACCAATGCATCATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PIQRSYSRFSTTSQS*SEPFGGKKTNASLK Trigger: TTTCAATGATGCATTGGTTTTCTTACCTCCAAATGGTTCTGACAATGACTGAGAAGTGGTAGAAAAGCGTGAATATGATCTTTGTATAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000304661.6 ENST00000371313.2 ENST00000673177.1 ENST00000673568.1 |
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