Pregenerated sensors for C1GALT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000106392Ensembl transcript IDs: ENST00000429911.5, ENST00000436587.7, ENST00000467716.1, ENST00000476068.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGACGCTACTCGGGAGGCTaGGGCAGGAGAATCGCACCA | + |
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Preference number: 2 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGRYSGG*GRRIAP Trigger: TGGTGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCG...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR GCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGACCCAGCACTTTGGGATaGCAAGGTGGGTGGATCACC | + |
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Preference number: 2 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGPSTLG*QGGWIT Trigger: GGTGATCCACCCACCTTGGCATCCCAAAGTGCTGGG...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR TCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCCTTAGCCGGGTGCTGTaGCTCACGCTCGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: RSAFNNILGKCENHSLRILSRVL*LTLVIP Trigger: TGGGATTACGAGCGTGAGTCACAGCACCCGGCTAAG...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR GCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGGAGAATCGCACCACTaGAGTCCAGCCTGGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: RSAFNNILGKCENHSLRIGESHH*SPAWET Trigger: TGTCTCCCAGGCTGGACTGCAGTGGTGCGATTCTCC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR TCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGATCTCTACTAAAAATATaGAAACTGGCGGGGCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGSLLKI*KLAGRG Trigger: GCCACGCCCCGCCAGTTTTCATATTTTTAGTAGAGA...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR TCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGACTGATACGGTTCCAATaGACACACAGGGTTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGLIRFQ*THRVLN Trigger: ATTCAAAACCCTGTGTGTTCATTGGAACCGTATCAG...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR CAA 90 bp | TTCAGTGTGTTTCAAACACTACTTGCACCAAAATCACGTAGGTTGTaGGGTATTGGTTCTCAAACTAGGATAAGAAAGACACCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FSVFQTLLAPKSRRL*GIGSQTRIRKTPAE Trigger: CTCTGCAGGTGTCTTTCTTATCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTGTTTGAAACACACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR CCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGAAAGAATGCATACTCTTaGGCCCCATGCTTAAATTTG | + |
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Preference number: 2 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGKNAYS*APCLNL Trigger: CAAATTTAAGCATGGGGCCCAAGAGTATGCATTCTT...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR CAA 90 bp | ATCTTCAGTGTGTTTCAAACACTACTTGCACCAAAATCACGTAGGTaGTTGGGTATTGGTTCTCAAACTAGGATAAGAAAGACACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IFSVFQTLLAPKSRR*LGIGSQTRIRKTPA Trigger: TGCAGGTGTCTTTCTTATCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTGTTTGAAACACACTGAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR GCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGAAGTCCTTTTTCAGTaGAGTGCTAGACATATTACC | + |
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Preference number: 2 (lower is better) Translates to: RSAFNNILGKCENHSLRIEVLFQ*SARHIT Trigger: GGTAATATGTCTAGCACTGCACTGAAAAAGGACTTC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR TCA 72 bp | GCAGCGCGTGCCTGTAATCCCCGCTACTCGGGAGGCTaGGGCAGGAGAATCGCACCACTGCAGTCCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: AARACNPRYSGG*GRRIAPLQSSL Trigger: CAGGCTGGACTGCAGTGGTGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCGGGGATTACAGGCACGCGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR-3UTR CAA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGAAGTGACAAAGTTACTTaGTCTCTGAGCCTCAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGSDKVT*SLSLSF Trigger: GAAACTGAGGCTCAGAGACAAAGTAACTTTGTCACT...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR CCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGAAGCGCGTCCAGGCCGTaGCCCGCCTATGGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGSASRP*PAYGAA Trigger: GGCTGCGCCATAGGCGGGCCACGGCCTGGACGCGCT...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR CCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGCCGTGGCCCGCCTATaGCGCAGCCGCCACCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIAVARL*RSRHPK Trigger: CTTCGGGTGGCGGCTGCGCCATAGGCGGGCCACGGC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR GCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGCCGAGGCCGCCCGCTaGCGCCCAGATTATTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIAEAAR*RPDYSP Trigger: CGGGGAATAATCTGGGCGGCAGCGGGCGGCCTCGGC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR TCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGACTTAGCCGGGTGCTGTaGCTCACGCTCGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGLSRVL*LTLVIP Trigger: TGGGATTACGAGCGTGAGTCACAGCACCCGGCTAAG...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR TCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGACCGAAAGTGTATTTCTaGCATCAGCTGCGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGPKVYF*HQLRLP Trigger: AGGGAGCCGCAGCTGATGTCAGAAATACACTTTCGG...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR GCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGGCCCCGAGAGAGGCTaGATTTCCAACAAGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIGPERG*ISNKFP Trigger: TGGGAACTTGTTGGAAATGCAGCCTCTCTCGGGGCC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR TCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCTCTCTACTAAAAATATaGAAACTGGCGGGGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRISLLKI*KLAGRG Trigger: GCCACGCCCCGCCAGTTTTCATATTTTTAGTAGAGA...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR CAA 72 bp | CTCTTGGGCCCCATGCTTAAATTTGAATTTCTGAGATaGGGGTCTTCAGATCTGCATTTAACAACATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPMLKFEFLR*GSSDLHLTTSW Trigger: CCAGGATGTTGTTAAATGCAGATCTGAAGACCCCAATCTCAGAAATTCAAATTTAAGCATGGGGCCCAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR TCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCCATCCTGGGCAAGTGTaGGAACCACAGTTTAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIHPGQV*EPQFKN Trigger: ATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATG...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR GCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGAACTTTTGACAGTCACTaGCCAAGGTATCTGGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGTFDSH*PRYLVR Trigger: TCTTACCAGATACCTTGGGCAGTGACTGTCAAAAGT...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR GCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGACACCTGCAGAGTTTaGTTAAACACAACTGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIDTCRV*LNTTAS Trigger: GCTAGCAGTTGTGTTTAAGCAAACTCTGCAGGTGTC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR TCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCTTCAGGGTCGTATTTTaGAAGAAGCCACCTCAAATT | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIFRVVF*KKPPQI Trigger: AATTTGAGGTGGCTTCTTTCAAAATACGACCCTGAA...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR GCA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGATTCTTTCAAGTACAGTaGATCAACCTGGTAGTAACT | + |
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Preference number: 4 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGFFQVQ*INLVVT Trigger: AGTTACTACCAGGTTGATGCACTGTACTTGAAAGAA...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR CCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCAAGAATGCATACTCTTaGGCCCCATGCTTAAATTTG | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIKNAYS*APCLNL Trigger: CAAATTTAAGCATGGGGCCCAAGAGTATGCATTCTT...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR GCA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCGATAAGAAAGACACCTaGAGAGTTTGCTTAAACACA | + |
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Preference number: 4 (lower is better) Translates to: RSAFNNILGKCENHSLRIDKKDT*RVCLNT Trigger: TGTGTTTAAGCAAACTCTGCAGGTGTCTTTCTTATC...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR CAA 72 bp | GTGTTTCAAACACTACTTGCACCAAAATCACGTAGGTaGTTGGGTATTGGTTCTCAAACTAGGATAAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VFQTLLAPKSRR*LGIGSQTRIRK Trigger: CTTTCTTATCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTGTTTGAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| 3UTR CAA 72 bp | TTTCAAACACTACTTGCACCAAAATCACGTAGGTTGTaGGGTATTGGTTCTCAAACTAGGATAAGAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: FQTLLAPKSRRL*GIGSQTRIRKT Trigger: TGTCTTTCTTATCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTGTTTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS GCA 90 bp | GGAGCCTCCCTCCCTCTGTCTCTGTACGGGGGAGCTTCTTCCTTCTaGCTTCTCCCTTCTGTCTGGCCTATTAAACTCTCCGCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GASLPLSLYGGASSF*LLPSVWPIKLSAPG Trigger: TCCAGGAGCGGAGAGTTTAATAGGCCAGACAGAAGGGAGAAGGCAGAAGGAAGAAGCTCCCCCGTACAGAGACAGAGGGAGGGAGGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467716.1 |
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| CDS-3UTR CAA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGAATAAAAGAAATCCTATaGCTGATCCACAGAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGIKEIL*LIHRGR Trigger: CCTTCCTCTGTGGATCAGCAATAGGATTTCTTTTAT...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR CAA 90 bp | CACTACTTGCACCAAAATCACGTAGGTTGTTGGGTATTGGTTCTCAAACTAGGATTTGAATTTCTGAGATaGGGGTCTTCAGATCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: HYLHQNHVGCWVLVLKLGFEFLR*GSSDLH Trigger: ATGCAGATCTGAAGACCCCAATCTCAGAAATTCAAA...TCCTAGTTTGAGAACCAATACCCAACAACCTACGTGATTTTGGTGCAAGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS-3UTR CAA 90 bp | AGATCTGCATTTAACAACATCCTGGGCAAGTGTGAGAACCACAGTTTAAGAATCTGTTTCAAACACTACTaGCACCAAAATCACGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: RSAFNNILGKCENHSLRICFKHY*HQNHVG Trigger: ACCTACGTGATTTTGGTGCAAGTAGTGTTTGAAACA...GATTCTTAAACTGTGGTTCTCACACTTGCCCAGGATGTTGTTAAATGCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436587.7 |
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| CDS CAA 72 bp | CTCTCCGCTCCTGGAAGCAGATTATTCTTGAAGAGCTaGTTCTTTCTGCATCATGCTCCTGTTTCTATACTT | + |
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Preference number: 6 (lower is better) Translates to: LSAPGSRLFLKS*FFLHHAPVSIL Trigger: AAGTATAGAAACAGGAGCATGATGCAGAAAGAACAAGCTCTTCAAGAATAATCTGCTTCCAGGAGCGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467716.1 |
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| CDS CAA 90 bp | TCTGTCTGGCCTATTAAACTCTCCGCTCCTGGAAGCAGATTATTCTaGAAGAGCTTGTTCTTTCTGCATCATGCTCCTGTTTCTATACTT | + |
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Preference number: 6 (lower is better) Translates to: SVWPIKLSAPGSRLF*KSLFFLHHAPVSIL Trigger: AAGTATAGAAACAGGAGCATGATGCAGAAAGAACAAGCTCTTCAAGAATAATCTGCTTCCAGGAGCGGAGAGTTTAATAGGCCAGACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467716.1 |
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| CDS CAA 90 bp | CCTATTAAACTCTCCGCTCCTGGAAGCAGATTATTCTTGAAGAGCTaGTTCTTTCTGCATCATGCTCCTGTTTCTATACTTATATGCACA | + |
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Preference number: 6 (lower is better) Translates to: PIKLSAPGSRLFLKS*FFLHHAPVSILICT Trigger: TGTGCATATAAGTATAGAAACAGGAGCATGATGCAGAAAGAACAAGCTCTTCAAGAATAATCTGCTTCCAGGAGCGGAGAGTTTAATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467716.1 |
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| CDS CCA 72 bp | AACAGTAAAAAGGAGAAGGCTTCTGACTCCAATTTATaGCTGAGTAGAATAAAAATATCTCAGCCACACACT | + |
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Preference number: 6 (lower is better) Translates to: NSKKEKASDSNL*LSRIKISQPHT Trigger: AGTGTGTGGCTGAGATATTTTTATTCTACTCAGCCATAAATTGGAGTCAGAAGCCTTCTCCTTTTTACTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000429911.5 |
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| CDS GCA 72 bp | CAAGCTACTTATATTATTTTCTGTCAAACCGTATTTTaGATTGTGTTAATGTCACCTCACAATGTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QATYIIFCQTVF*IVLMSPHNVWN Trigger: GTTCCAGACATTGTGAGGTGACATTAACACAATGCAAAATACGGTTTGACAGAAAATAATATAAGTAGCTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476068.1 |
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