Pregenerated sensors for C19ORF81 (Homo sapiens)
Ensembl gene IDs: ENSG00000235034Ensembl transcript IDs: ENST00000425202.6, ENST00000458538.1, ENST00000490451.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCCTGGCGCACGATCTGGTaGGCAAGCCCGCGGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LLPGKATPPVLRGSGWVAWRTIW*ASPRGL Trigger: CAGTCCCCGCGGGCTTGCGCACCAGATCGTGCGCCA...GGCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCCGCGCCCGCTCTCCATaGCCCCTGGTAACTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGRARSP*PLVTGP Trigger: AGGCCCAGTTACCAGGGGCCATGGAGAGCGGGCGCG...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR TCA 90 bp | CTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCAACGCAAGCCCGCGGGGACTaGGCCCGGAGCGCAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTVSTPSSRPRLLPGKATQARGD*ARSAAS Trigger: GCTTGCTGCGCTCCGGGCTCAGTCCCCGCGGGCTTG...CGTTGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCCCCAGGCTCCGAGCCTaGATCTCCTCTGGGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGPRLRA*ISSGVS Trigger: GGAGACCCCAGAGGAGATGCAGGCTCGGAGCCTGGG...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCGCTCCTGCCTTCCTGTaGATGGTGGGGCTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGAPAFL*MVGLPM Trigger: CATGGGCAGCCCCACCATGCACAGGAAGGCAGGAGC...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | ACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCAACCCAGGGCCTCGAGCATaGGCCGCCGGACCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: THSIHPLEPAPPPSWEGNPGPRA*AAGPGS Trigger: GCTCCCTGGTCCGGCGGCGCATGCTCGAGGCCCTGG...GTTGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCAAGCGCGAGCGCGTCTaGAAGTCCGTGACCGCGATG | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGKRERV*KSVTAM Trigger: CATCGCGGTCACGGACTTCCAGACGCGCTCGCGCTT...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCCGGGAAGCTGGTGGTGTaGGGAACTTCCGGATGCACG | + |
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Preference number: 4 (lower is better) Translates to: LLPGKATPPVLRGSGWVAGKLVV*GTSGCT Trigger: CGTGCATCCGGAAGTTCCCCACACCACCAGCTTCCC...GGCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR TCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCCCTCGTACTCTGCAATaGCCTGCCGCAGGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGPRTLQ*PAAGTA Trigger: AGCAGTACCTGCGGCAGGTCATTGCAGAGTACGAGG...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CGCCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGTGGGGAACTTCCGGATaGACGGGAGTTCTCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLLPGKATPPVLRGSGWVWGTSG*TGVLGP Trigger: TGGACCGAGAACTCCCGTGCATCCGGAAGTTCCCCA...CACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCTGTTCTCAAAGCGGATaGTGCTCACGCGCCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGCSQSG*CSRARS Trigger: AGAGCGGGCGCGTGAGCAGCATCCGCTTTGAGAACA...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTGGCTGCAGCACCTCCAGGTaGGTAAAATCCTCCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PPSWEGNAPCPPGLRVGGCSTSR*VKSSSG Trigger: GCCCGAGGAGGATTTTACCCACCTGGAGGTGCTGCA...GCCACCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | CTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCAACGAGCAGGAGGTCGTCGTaGCGCACGATCTGGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LTVSTPSSRPRLLPGKATSRRSS*RTIWCA Trigger: TGCGCACCAGATCGTGCGCCACGACGACCTCCTGCT...CGTTGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CCCGCCTCCTTCCTGGGAAGGCAACGCCCCCTGTCCTCCGGGGCTCCGGGTGGGTACTCTGCAATGACCTaGCGCAGGTACTGCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PASFLGRQRPLSSGAPGGYSAMT*RRYCFE Trigger: CTCAAAGCAGTACCTGCGGCAGGTCATTGCAGAGTA...CCCACCCGGAGCCCCGGAGGACAGGGGGCGTTGCCTTCCCAGGAAGGAGGCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | AAACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCATGGTGGGGCTGCCCATaGCAGGGAAGCACACGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KLTVSTPSSRPRLLPGKAWWGCP*QGSTRA Trigger: AGCCCGTGTGCTTCCCTGCCATGGGCAGCCCCACCA...TGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCAACGCATAAGGAGGGCTCCTaGCTTCCTGTGCATGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LTVSTPSSRPRLLPGKATHKEGS*LPVHGG Trigger: CCCACCATGCACAGGAAGGCAGGAGCCCTCCTTATG...CGTTGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | AAACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCACCTTCCTGTGCATGGTaGGGCTGCCCATGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KLTVSTPSSRPRLLPGKAPSCAW*GCPWQG Trigger: TCCCTGCCATGGGCAGCCCCACCATGCACAGGAAGG...TGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR TCA 90 bp | ACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCAACACTGCTTTGAGGATTTaGTGGGCCTGCCCAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: THSIHPLEPAPPPSWEGNTALRI*WACPGS Trigger: GGAGCCTGGGCAGGCCCATCAAATCCTCAAAGCAGT...GTTGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | CTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGAAGGCAACGCAGTGCCTCGTACTCTaGAATGACCTGCCGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LTVSTPSSRPRLLPGKATQCLVL*NDLPQV Trigger: TACCTGCGGCAGGTCATTGCAGAGTACGAGGCACTG...CGTTGCCTTCCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | ATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTGGGCTGCCTTCCTGTGCATaGTGGGGCTGCCCATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IIKLTVSTPSSRPRLLPGLPSCA*WGCPWQ Trigger: CTGCCATGGGCAGCCCCACCATGCACAGGAAGGCAG...CCCAGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | TTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTTCGTGGCGCACGATCTaGTGCGCAAGCCCGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FIIKLTVSTPSSRPRLLPSWRTI*CASPRG Trigger: TCCCCGCGGGCTTGCGCACCAGATCGTGCGCCACGA...AGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | TTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTTCTCAAAGCGGATGCTaGTCACGCGCCCGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FIIKLTVSTPSSRPRLLPSQSGC*SRARSP Trigger: TGGAGAGCGGGCGCGTGAGCAGCATCCGCTTTGAGA...AGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | TGTACCAGGTCATTCTTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGCGGGCAAGGTCTCCATaGAGAGGCAGAGGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CTRSFFIIKLTVSTPSSRRARSP*RGRGAG Trigger: CCCAGCCCCTCTGCCTCTGCATGGAGACCTTGCCCG...CCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAAGAATGACCTGGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR CCA 90 bp | TTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGCCCCGCCTCCTTCCTAGCCTGCATCTCCTCTaGGGTCTCCAGGTCCATAAG | + |
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Preference number: 4 (lower is better) Translates to: FIIKLTVSTPSSRPRLLPSLHLL*GLQVHK Trigger: CTTATGGACCTGGAGACCCCAGAGGAGATGCAGGCT...AGGAAGGAGGCGGGGCCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | TGTACCAGGTCATTCTTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGTGTGCATGGTGGGGCTaGCCATGGCAGGGAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: CTRSFFIIKLTVSTPSSRCAWWG*PWQGST Trigger: TGTGCTTCCCTGCCATGGGCAGCCCCACCATGCACA...CCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAAGAATGACCTGGTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR GCA 90 bp | TGTACCAGGTCATTCTTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCGGGAGTTCTCGGTCCAGTaGCTCGTACTCTGCAATGAC | + |
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Preference number: 4 (lower is better) Translates to: CTRSFFIIKLTVSTPSSREFSVQ*LVLCND Trigger: GTCATTGCAGAGTACGAGGCACTGGACCGAGAACTC...CCGGCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAAGAATGACCTGGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS-3UTR TCA 90 bp | TTTTGTACCAGGTCATTCTTTATAATTAAACTCACAGTATCCACCCCCTCGAGCCAGCAGTCCCACAGATaGCGTTCATGTTCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FCTRSFFIIKLTVSTPSSQQSHR*RSCSQS Trigger: GCTTTGAGAACATGAACGTCATCTGTGGGACTGCTG...GCTCGAGGGGGTGGATACTGTGAGTTTAATTATAAAGAATGACCTGGTACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS GCA 90 bp | GGCGTCAGGCCTCCTCGTTCGGCTCCGCCCCCAGGGCCTCGAGCATaGGCCGCCGGACCAGGGAGCGGCGCAGGTGCAGGCGGTAGTCGC | + |
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Preference number: 5 (lower is better) Translates to: GVRPPRSAPPPGPRA*AAGPGSGAGAGGSR Trigger: GCGACTACCGCCTGCACCTGCGCCGCTCCCTGGTCCGGCGGCGCATGCTCGAGGCCCTGGGGGCGGAGCCGAACGAGGAGGCCTGACGCC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000490451.1 |
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| CDS CCA 90 bp | AGCCCGCGGGGACTGAGCCCGGAGCGCAGCAAGCGCGAGCGCGTCTaGAAGTCCGTGACCGCGATGAGCCACCGGTTCCGGCGCCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SPRGLSPERSKRERV*KSVTAMSHRFRRPA Trigger: TGCTGGGCGCCGGAACCGGTGGCTCATCGCGGTCACGGACTTCCAGACGCGCTCGCGCTTGCTGCGCTCCGGGCTCAGTCCCCGCGGGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000458538.1 |
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| CDS CCA 90 bp | AGCCCGCGGGGACTGAGCCCGGAGCGCAGCAAGCGCGAGCGCGTCTaGAAGTCCGTGACCGCGATGAGCCACTATGTGCTCAGTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SPRGLSPERSKRERV*KSVTAMSHYVLSLF Trigger: GAAGAGACTGAGCACATAGTGGCTCATCGCGGTCACGGACTTCCAGACGCGCTCGCGCTTGCTGCGCTCCGGGCTCAGTCCCCGCGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490451.1 |
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| CDS GCA 90 bp | AGGTACTGCTTTGAGGATTTGATGGGCCTGCCCAGGCTCCGAGCCTaGATCTCCTCTGGGGTCTCCAGGTCCATAAGGAGGGCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RYCFEDLMGLPRLRA*ISSGVSRSIRRAPA Trigger: GGCAGGAGCCCTCCTTATGGACCTGGAGACCCCAGAGGAGATGCAGGCTCGGAGCCTGGGCAGGCCCATCAAATCCTCAAAGCAGTACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425202.6 |
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| CDS GCA 90 bp | AGGTACTGCTTTGAGGATTTGATGGGCCTGCCCAGGCTCCGAGCCTaGATCTCCTCTGGGGTCTCCAGGTCCATAAGGAGGGCTCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: RYCFEDLMGLPRLRA*ISSGVSRSIRRAPR Trigger: CCTAGGAGCCCTCCTTATGGACCTGGAGACCCCAGAGGAGATGCAGGCTCGGAGCCTGGGCAGGCCCATCAAATCCTCAAAGCAGTACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458538.1 |
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| CDS GCA 90 bp | CGCGATGAGCCACTATGTGCTCAGTCTCTTCCACCCCCTCACAGCTaGCTTTCCAGGCTCAGACCTCTATCCCGGTCACTACTGGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: RDEPLCAQSLPPPHS*LSRLRPLSRSLLGH Trigger: GTGACCCAGTAGTGACCGGGATAGAGGTCTGAGCCTGGAAAGGCAGCTGTGAGGGGGTGGAAGAGACTGAGCACATAGTGGCTCATCGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490451.1 |
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| CDS GCA 72 bp | CCTCCTCGTTCGGCTCCGCCCCCAGGGCCTCGAGCATaGGCCGCCGGACCAGGGAGCGGCGCAGGTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PPRSAPPPGPRA*AAGPGSGAGAG Trigger: GCCTGCACCTGCGCCGCTCCCTGGTCCGGCGGCGCATGCTCGAGGCCCTGGGGGCGGAGCCGAACGAGGAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000490451.1 |
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| CDS TCA 72 bp | CGTGGCGCACGATCTGGTGCGCAAGCCCGCGGGGACTaGGCCCGGAGCGCAGCAAGCGCGAGCGCGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RGARSGAQARGD*ARSAASASASG Trigger: TCCAGACGCGCTCGCGCTTGCTGCGCTCCGGGCTCAGTCCCCGCGGGCTTGCGCACCAGATCGTGCGCCACG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425202.6 ENST00000458538.1 ENST00000490451.1 |
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| CDS GCA 72 bp | TCGCCCAGCAGGAGGTCGTCGTGGCGCACGATCTGGTaGGCAAGCCCGCGGGGACTGAGCCCGGAGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPSRRSSWRTIW*ASPRGLSPERS Trigger: GCTGCGCTCCGGGCTCAGTCCCCGCGGGCTTGCGCACCAGATCGTGCGCCACGACGACCTCCTGCTGGGCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425202.6 ENST00000458538.1 ENST00000490451.1 |
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| CDS CCA 72 bp | GGACTGAGCCCGGAGCGCAGCAAGCGCGAGCGCGTCTaGAAGTCCGTGACCGCGATGAGCCACCGGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GLSPERSKRERV*KSVTAMSHRFR Trigger: CCGGAACCGGTGGCTCATCGCGGTCACGGACTTCCAGACGCGCTCGCGCTTGCTGCGCTCCGGGCTCAGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000458538.1 |
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| CDS CCA 72 bp | GGACTGAGCCCGGAGCGCAGCAAGCGCGAGCGCGTCTaGAAGTCCGTGACCGCGATGAGCCACTATGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GLSPERSKRERV*KSVTAMSHYVL Trigger: GAGCACATAGTGGCTCATCGCGGTCACGGACTTCCAGACGCGCTCGCGCTTGCTGCGCTCCGGGCTCAGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490451.1 |
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| CDS GCA 72 bp | GGGGAACTTCCGGATGCACGGGAGTTCTCGGTCCAGTaGCTCGTACTCTGCAATGACCTGCCGCAGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: GELPDAREFSVQ*LVLCNDLPQVL Trigger: CAGTACCTGCGGCAGGTCATTGCAGAGTACGAGGCACTGGACCGAGAACTCCCGTGCATCCGGAAGTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000458538.1 |
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| CDS GCA 72 bp | TTTGAGGATTTGATGGGCCTGCCCAGGCTCCGAGCCTaGATCTCCTCTGGGGTCTCCAGGTCCATAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FEDLMGLPRLRA*ISSGVSRSIRR Trigger: CCTCCTTATGGACCTGGAGACCCCAGAGGAGATGCAGGCTCGGAGCCTGGGCAGGCCCATCAAATCCTCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000458538.1 |
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| CDS GCA 72 bp | AGTTCTCGGTCCAGTGCCTCGTACTCTGCAATGACCTaGCGCAGGTACTGCTTTGAGGATTTGATGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSRSSASYSAMT*RRYCFEDLMGL Trigger: CAGGCCCATCAAATCCTCAAAGCAGTACCTGCGGCAGGTCATTGCAGAGTACGAGGCACTGGACCGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425202.6 ENST00000458538.1 |
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