Pregenerated sensors for C19ORF73 (Homo sapiens)
Ensembl gene IDs: ENSG00000221916Ensembl transcript IDs: ENST00000408991.4
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATaGGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAGCCTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: VCPASLGWCLEMWRE*EELRSGQAVEKPFP Trigger: TGGAAAAGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR CCA 90 bp | TGTCTGTGTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTaGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: CLCVCPASLGWCLEM*RECEELRSGQAVEK Trigger: CTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACACACAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR TCA 90 bp | CATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTaGGGTCAGGCCAAGCCGTTGAGAAGCCTTTTCCAGAGTCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: HPWVGVLRCGGNARS*GQAKPLRSLFQSLR Trigger: TCTCAGACTCTGGAAAAGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR TCA 90 bp | TCCTGTACAGTATTTATTGTTCCTGGCACTTTATTTAAAGATATTTaGCCCTCACTGAGTGTCTGTGTGTCTGTCCTGCATCCCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: SCTVFIVPGTLFKDI*PSLSVCVSVLHPWV Trigger: AACCCAGGGATGCAGGACAGACACACAGACACTCAGTGAGGGTCAAATATCTTTAAATAAAGTGCCAGGAACAATAAATACTGTACAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR CCA 72 bp | GTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTaGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: VCPASLGWCLEM*RECEELRSGQA Trigger: GGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR GCA 72 bp | GCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATaGGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ASLGWCLEMWRE*EELRSGQAVEK Trigger: CTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR TCA 72 bp | TCTGTGTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTaGGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SVCLSCIPGLVS*DVEGMRGAEVR Trigger: CCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACACACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR TCA 72 bp | GTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTaGGGTCAGGCCAAGCCGTTGAGAAGCCTTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VGVLRCGGNARS*GQAKPLRSLFQ Trigger: CTGGAAAAGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR TCA 72 bp | TTCCTGGCACTTTATTTAAAGATATTTGACCCTCACTaGGTGTCTGTGTGTCTGTCCTGCATCCCTGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: FLALYLKIFDPH*VSVCLSCIPGL Trigger: CAACCCAGGGATGCAGGACAGACACACAGACACTCAGTGAGGGTCAAATATCTTTAAATAAAGTGCCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| 3UTR TCA 72 bp | GTATTTATTGTTCCTGGCACTTTATTTAAAGATATTTaGCCCTCACTGAGTGTCTGTGTGTCTGTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: VFIVPGTLFKDI*PSLSVCVSVLH Trigger: ATGCAGGACAGACACACAGACACTCAGTGAGGGTCAAATATCTTTAAATAAAGTGCCAGGAACAATAAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | GAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAGCCTAGTCGCGGGTGGGGGTaGCGCGTGCAGTTCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: EMWRECEELRSGQAVEKPSRGWG*RVQFPR Trigger: CCTCGGGAACTGCACGCGGCACCCCCACCCGCGACT...AGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | TGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAGCCTTTTCCAGAGTCTGAGCGCAGCCGGAGCCAGTaGGCGGCCTCTGTGTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CEELRSGQAVEKPFPESERSRSQ*AASVWA Trigger: CGCCCACACAGAGGCCGCCCACTGGCTCCGGCTGCG...CTCAGACTCTGGAAAAGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | TCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCGGGTGCAGAATGAGGTaGCCTCGCCCACCGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SLGWCLEMWRECEELRSGGCRMR*PRPPGA Trigger: AGCGCCCGGTGGGCGAGGGCACCTCATTCTGCACCC...GCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | TGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGTGGGCGGCCTCTGTGTaGGCGGGGCGGAGCGAACCA | + |
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Preference number: 4 (lower is better) Translates to: CLEMWRECEELRSGQAVEWAASV*AGRSEP Trigger: TGGTTCGCTCCGCCCCGCCCACACAGAGGCCGCCCA...CTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGCGCAGGGGTGCAGAATaGGGTGCCCTCGCCCACCGG | + |
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Preference number: 4 (lower is better) Translates to: CVCPASLGWCLEMWRECERRGAE*GALAHR Trigger: CCGGTGGGCGAGGGCACCTCATTCTGCACCCCTGCG...CTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | GTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGGCGGGCGCAGGGGTaGAGAATGAGGTGCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VSVLHPWVGVLRCGGNARRRAQG*RMRCPR Trigger: GCGAGGGCACCTCATTCTGCACCCCTGCGCCCGCCT...CCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | GTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGCCGCCGGGGGAACCCTaGAGGCCGCACTACTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VSVLHPWVGVLRCGGNARPPGEP*RPHYCL Trigger: CAGACAGTAGTGCGGCCTGCAGGGTTCCCCCGGCGG...CCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | ATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAGCCTTTTCGTGGGAGTCGCGGGTaGGGGTGCCGCGTGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: MWRECEELRSGQAVEKPFRGSRG*GCRVQF Trigger: GAACTGCACGCGGCACCCCCACCCGCGACTCCCACG...AAAAGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | CTGAGGTCAGGCCAAGCCGTTGAGAAGCCTTTTCCAGAGTCTGAGAACAGAGGTAGCCCTCGTGTCCCGTaGGGCGCGAGGGCTAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LRSGQAVEKPFPESENRGSPRVP*GARASA Trigger: CGCACTAGCCCTCGCGCCGCACGGGACACGAGGGCT...ACCTCTGTTCTCAGACTCTGGAAAAGGCTTCTCAACGGCTTGGCCTGACCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | CTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCACTACTGTCTGCGTaGGAGTCGCGGGTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGWCLEMWRECEELRSGQALLSA*ESRVGV Trigger: CACCCCCACCCGCGACTCCCACGCAGACAGTAGTGC...TTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGGGAATGCGAGGAGCTaGGGTCAGGCCAAGCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: CVCPASLGWCLEMWRECEGNARS*GQAKPL Trigger: CAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCC...CTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | AGATATTTGACCCTCACTGAGTGTCTGTGTGTCTGTCCTGCATCCCTGGGTTGGGGCCGCACTACTGTCTaGGTGGGAGTCGCGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RYLTLTECLCVCPASLGWGRTTV*VGVAGG Trigger: CCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCC...CCAACCCAGGGATGCAGGACAGACACACAGACACTCAGTGAGGGTCAAATATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | CTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAAAGCAGCCCCCGCCTTaGAATCCAACCTTTAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LGWCLEMWRECEELRSGQKQPPP*NPTFSL Trigger: GAGGCTAAAGGTTGGATTTCAAGGCGGGGGCTGCTT...TTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | TGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTTCTGGGTCTGAGTGCTaGGGCAGAACTGAGGACAAC | + |
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Preference number: 4 (lower is better) Translates to: WCLEMWRECEELRSGQAVSGSEC*GRTEDN Trigger: GTTGTCCTCAGTTCTGCCCCAGCACTCAGACCCAGA...AACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | CTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAACCTGCATCCCTGGGTTaGTGTCTTGAGATGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGWCLEMWRECEELRSGQPASLG*CLEMWR Trigger: CCTCCACATCTCAAGACACCAACCCAGGGATGCAGG...TTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCAACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | CTGTGTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCCCTGGGTTGGTGTCTTaGGATGTGGAGGGAATGCGA | + |
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Preference number: 4 (lower is better) Translates to: LCVCPASLGWCLEMWRECPGLVS*DVEGMR Trigger: TCGCATTCCCTCCACATCTCAAGACACCAACCCAGG...GCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | GTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGTCTGTGTGTCTGTCCTaGATCCCTGGGTTGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VSVLHPWVGVLRCGGNARSVCLS*IPGLVS Trigger: AGACACCAACCCAGGGATGCAGGACAGACACACAGA...CCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | AAGCCGTTGAGAAGCCTTTTCCAGAGTCTGAGAACAGAGGTTAAGACCTCTCCCCTTCCTCCAGAGTCCTaGAACGCAGCCGGAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPLRSLFQSLRTEVKTSPLPPES*NAAGAS Trigger: ACTGGCTCCGGCTGCGTTTCAGGACTCTGGAGGAAG...GGGAGAGGTCTTAACCTCTGTTCTCAGACTCTGGAAAAGGCTTCTCAACGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR GCA 90 bp | AGATATTTGACCCTCACTGAGTGTCTGTGTGTCTGTCCTGCATCCCTGGGTTGGCAGTCTGGGTCTGAGTaGTGGGGCAGAACTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RYLTLTECLCVCPASLGWQSGSE*WGRTED Trigger: GTCCTCAGTTCTGCCCCAGCACTCAGACCCAGACTG...CCAACCCAGGGATGCAGGACAGACACACAGACACTCAGTGAGGGTCAAATATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | GTGTCTGTCCTGCATCCCTGGGTTGGTGTCTTGAGATGTGGAGGGAATGCGAGGGCCTTTTCCAGAGTCTaGGAACAGAGGTTAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: VSVLHPWVGVLRCGGNARAFSRV*EQRLRP Trigger: AGGTCTTAACCTCTGTTCTCAGACTCTGGAAAAGGC...CCTCGCATTCCCTCCACATCTCAAGACACCAACCCAGGGATGCAGGACAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR TCA 90 bp | ATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGAAGCCTTTTATATTTGACCCTCACTaGGTGTCTGTGTGTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: MWRECEELRSGQAVEKPFIFDPH*VSVCLS Trigger: GGACAGACACACAGACACTCAGTGAGGGTCAAATAT...AAAAGGCTTCTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CCA 90 bp | AGATATTTGACCCTCACTGAGTGTCTGTGTGTCTGTCCTGCATCCCTGGGTTGGTCTGTCCTGCATCCCTaGGTTGGTGTCTTGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: RYLTLTECLCVCPASLGWSVLHP*VGVLRC Trigger: ACATCTCAAGACACCAACCCAGGGATGCAGGACAGA...CCAACCCAGGGATGCAGGACAGACACACAGACACTCAGTGAGGGTCAAATATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 90 bp | CCCAGCCCTCGTGTCCCGTGCGGCGCGAGGGCTAGTGCGCGCCACTaGCGGGAGCCGGGGTCGCGACTCGCGTTCCACGCCGCGCGCTAC | + |
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Preference number: 5 (lower is better) Translates to: PSPRVPCGARASARH*REPGSRLAFHAARY Trigger: GTAGCGCGCGGCGTGGAACGCGAGTCGCGACCCCGGCTCCCGGCAGTGGCGCGCACTAGCCCTCGCGCCGCACGGGACACGAGGGCTGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 90 bp | GCCTCGTCCGCCGGGGGAACCCTGCAGGCCGCACTACTGTCTGCGTaGGAGTCGCGGGTGGGGGTGCCGCGTGCAGTTCCCGAGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: ASSAGGTLQAALLSA*ESRVGVPRAVPEAG Trigger: GCCCGCCTCGGGAACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCCTGCAGGGTTCCCCCGGCGGACGAGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 90 bp | CCCTGCAGGCCGCACTACTGTCTGCGTGGGAGTCGCGGGTGGGGGTaGCGCGTGCAGTTCCCGAGGCGGGCGCAGGGGTGCAGAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: PCRPHYCLRGSRGWG*RVQFPRRAQGCRMR Trigger: CCTCATTCTGCACCCCTGCGCCCGCCTCGGGAACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCCTGCAGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS TCA 90 bp | GGGGGTGCCGCGTGCAGTTCCCGAGGCGGGCGCAGGGGTGCAGAATaGGGTGCCCTCGCCCACCGGGCGCTCACTCCACCTTCCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: GGAACSSRGGRRGAE*GALAHRALTPPSKH Trigger: GTGTTTGGAAGGTGGAGTGAGCGCCCGGTGGGCGAGGGCACCTCATTCTGCACCCCTGCGCCCGCCTCGGGAACTGCACGCGGCACCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 90 bp | ATTAGCCTCGTCCGCCGGGGGAACCCTGCAGGCCGCACTACTGTCTaGGTGGGAGTCGCGGGTGGGGGTGCCGCGTGCAGTTCCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ISLVRRGNPAGRTTV*VGVAGGGAACSSRG Trigger: GCCTCGGGAACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCCTGCAGGGTTCCCCCGGCGGACGAGGCTAAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 90 bp | TGCCGCGTGCAGTTCCCGAGGCGGGCGCAGGGGTGCAGAATGAGGTaGCCTCGCCCACCGGGCGCTCACTCCACCTTCCAAACACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: CRVQFPRRAQGCRMR*PRPPGAHSTFQTQR Trigger: GCGCTGTGTTTGGAAGGTGGAGTGAGCGCCCGGTGGGCGAGGGCACCTCATTCTGCACCCCTGCGCCCGCCTCGGGAACTGCACGCGGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 90 bp | TCCAGAGTCCTGAAACGCAGCCGGAGCCAGTGGGCGGCCTCTGTGTaGGCGGGGCGGAGCGAACCATTAGCCTCGTCCGCCGGGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: SRVLKRSRSQWAASV*AGRSEPLASSAGGT Trigger: GGTTCCCCCGGCGGACGAGGCTAATGGTTCGCTCCGCCCCGCCCACACAGAGGCCGCCCACTGGCTCCGGCTGCGTTTCAGGACTCTGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 90 bp | GGAAGCAGCCCCCGCCTTGAAATCCAACCTTTAGCCTCATCCCGCTaGCCGCCCAGCCCTCGTGTCCCGTGCGGCGCGAGGGCTAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: GSSPRLEIQPLASSR*PPSPRVPCGARASA Trigger: CGCACTAGCCCTCGCGCCGCACGGGACACGAGGGCTGGGCGGGCAGCGGGATGAGGCTAAAGGTTGGATTTCAAGGCGGGGGCTGCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 90 bp | GGCCAAGTCCCTTCCTCCAGAGTCCTGAAACGCAGCCGGAGCCAGTaGGCGGCCTCTGTGTGGGCGGGGCGGAGCGAACCATTAGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GQVPSSRVLKRSRSQ*AASVWAGRSEPLAS Trigger: CGAGGCTAATGGTTCGCTCCGCCCCGCCCACACAGAGGCCGCCCACTGGCTCCGGCTGCGTTTCAGGACTCTGGAGGAAGGGACTTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS TCA 90 bp | CCACCTTCCAAACACAGCGCGTCTTTCCGGAAGCAGCCCCCGCCTTaGAATCCAACCTTTAGCCTCATCCCGCTGCCCGCCCAGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PPSKHSASFRKQPPP*NPTFSLIPLPAQPS Trigger: CGAGGGCTGGGCGGGCAGCGGGATGAGGCTAAAGGTTGGATTTCAAGGCGGGGGCTGCTTCCGGAAAGACGCGCTGTGTTTGGAAGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CAA 90 bp | TGGTGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTCCCTGGGTTGGTGTCTaGAGATGTGGAGGGAATGCG | + |
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Preference number: 5 (lower is better) Translates to: WCLEMWRECEELRSGQAVPWVGV*RCGGNA Trigger: CGCATTCCCTCCACATCTCAAGACACCAACCCAGGG...AACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS-3UTR CAA 90 bp | TGTCTTGAGATGTGGAGGGAATGCGAGGAGCTGAGGTCAGGCCAAGCCGTTGAGGGTCAGGCCAAGCCGTaGAGAAGCCTTTTCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: CLEMWRECEELRSGQAVEGQAKP*RSLFQS Trigger: ACTCTGGAAAAGGCTTCTCAACGGCTTGGCCTGACC...CTCAACGGCTTGGCCTGACCTCAGCTCCTCGCATTCCCTCCACATCTCAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 72 bp | CGTGTCCCGTGCGGCGCGAGGGCTAGTGCGCGCCACTaGCGGGAGCCGGGGTCGCGACTCGCGTTCCACGCC | + |
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Preference number: 6 (lower is better) Translates to: RVPCGARASARH*REPGSRLAFHA Trigger: GGCGTGGAACGCGAGTCGCGACCCCGGCTCCCGGCAGTGGCGCGCACTAGCCCTCGCGCCGCACGGGACACG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 72 bp | GCCTCATCCCGCTGCCCGCCCAGCCCTCGTGTCCCGTaGGGCGCGAGGGCTAGTGCGCGCCACTGCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ASSRCPPSPRVP*GARASARHCRE Trigger: CTCCCGGCAGTGGCGCGCACTAGCCCTCGCGCCGCACGGGACACGAGGGCTGGGCGGGCAGCGGGATGAGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 72 bp | CCGCACTACTGTCTGCGTGGGAGTCGCGGGTGGGGGTaGCGCGTGCAGTTCCCGAGGCGGGCGCAGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PHYCLRGSRGWG*RVQFPRRAQGC Trigger: GCACCCCTGCGCCCGCCTCGGGAACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 72 bp | GTCCGCCGGGGGAACCCTGCAGGCCGCACTACTGTCTaGGTGGGAGTCGCGGGTGGGGGTGCCGCGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VRRGNPAGRTTV*VGVAGGGAACS Trigger: ACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCCTGCAGGGTTCCCCCGGCGGAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 72 bp | TGCAGGCCGCACTACTGTCTGCGTGGGAGTCGCGGGTaGGGGTGCCGCGTGCAGTTCCCGAGGCGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: CRPHYCLRGSRG*GCRVQFPRRAQ Trigger: CTGCGCCCGCCTCGGGAACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCCTGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 72 bp | GCCGGGGGAACCCTGCAGGCCGCACTACTGTCTGCGTaGGAGTCGCGGGTGGGGGTGCCGCGTGCAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: AGGTLQAALLSA*ESRVGVPRAVP Trigger: GGGAACTGCACGCGGCACCCCCACCCGCGACTCCCACGCAGACAGTAGTGCGGCCTGCAGGGTTCCCCCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 72 bp | CTGAAACGCAGCCGGAGCCAGTGGGCGGCCTCTGTGTaGGCGGGGCGGAGCGAACCATTAGCCTCGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LKRSRSQWAASV*AGRSEPLASSA Trigger: GGCGGACGAGGCTAATGGTTCGCTCCGCCCCGCCCACACAGAGGCCGCCCACTGGCTCCGGCTGCGTTTCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 72 bp | CAGTTCCCGAGGCGGGCGCAGGGGTGCAGAATGAGGTaGCCTCGCCCACCGGGCGCTCACTCCACCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: QFPRRAQGCRMR*PRPPGAHSTFQ Trigger: TTGGAAGGTGGAGTGAGCGCCCGGTGGGCGAGGGCACCTCATTCTGCACCCCTGCGCCCGCCTCGGGAACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS CCA 72 bp | CCTTCCTCCAGAGTCCTGAAACGCAGCCGGAGCCAGTaGGCGGCCTCTGTGTGGGCGGGGCGGAGCGAACCA | + |
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Preference number: 6 (lower is better) Translates to: PSSRVLKRSRSQ*AASVWAGRSEP Trigger: TGGTTCGCTCCGCCCCGCCCACACAGAGGCCGCCCACTGGCTCCGGCTGCGTTTCAGGACTCTGGAGGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS GCA 72 bp | CGGAGGGCGGAGGCAGGGACCCAGTCTGGGTCTGAGTaGTGGGGCAGAACTGAGGACAACGCTGCCTACCCT | + |
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Preference number: 6 (lower is better) Translates to: RRAEAGTQSGSE*WGRTEDNAAYP Trigger: AGGGTAGGCAGCGTTGTCCTCAGTTCTGCCCCAGCACTCAGACCCAGACTGGGTCCCTGCCTCCGCCCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS TCA 72 bp | CTGAGGGCGAAGGCCAAGTCCCTTCCTCCAGAGTCCTaGAACGCAGCCGGAGCCAGTGGGCGGCCTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LRAKAKSLPPES*NAAGASGRPLC Trigger: ACACAGAGGCCGCCCACTGGCTCCGGCTGCGTTTCAGGACTCTGGAGGAAGGGACTTGGCCTTCGCCCTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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| CDS TCA 72 bp | AAACACAGCGCGTCTTTCCGGAAGCAGCCCCCGCCTTaGAATCCAACCTTTAGCCTCATCCCGCTGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: KHSASFRKQPPP*NPTFSLIPLPA Trigger: GGCGGGCAGCGGGATGAGGCTAAAGGTTGGATTTCAAGGCGGGGGCTGCTTCCGGAAAGACGCGCTGTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408991.4 |
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