Pregenerated sensors for C19ORF71 (Homo sapiens)
Ensembl gene IDs: ENSG00000183397Ensembl transcript IDs: ENST00000329493.6, ENST00000681976.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGCCAGCGGTTGTAGGCCTCGCGGAAGGGGCTGGCCGGGGCCCGTaGCAGGTTGTACCAGGCTTCCCAGGCGTCCGAGTTGGTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VPAVVGLAEGAGRGP*QVVPGFPGVRVGQA Trigger: GGCCTGACCAACTCGGACGCCTGGGAAGCCTGGTACAACCTGCCACGGGCCCCGGCCAGCCCCTTCCGCGAGGCCTACAACCGCTGGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS TCA 90 bp | GGTGCCGGGCGGGCGCTGGGGTGCCGACAGGGAGGGCACGTAGTCTaGTGCCCTCCACAGTGGCTCCACCCCGTACCGGTTCCTGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: GAGRALGCRQGGHVV*CPPQWLHPVPVPVE Trigger: CTCAACAGGAACCGGTACGGGGTGGAGCCACTGTGGAGGGCATCAGACTACGTGCCCTCCCTGTCGGCACCCCAGCGCCCGCCCGGCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 90 bp | CCGGGGCCCGTGGCAGGTTGTACCAGGCTTCCCAGGCGTCCGAGTTaGTCAGGCCTGTGTACCACAGCTGGCCGGCTGCGTCCCGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PGPVAGCTRLPRRPS*SGLCTTAGRLRPVP Trigger: TGGGACGGGACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCGGACGCCTGGGAAGCCTGGTACAACCTGCCACGGGCCCCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 90 bp | GTTGGTAGCAGCTGTGCCAGCGGTTGTAGGCCTCGCGGAAGGGGCTaGCCGGGGCCCGTGGCAGGTTGTACCAGGCTTCCCAGGCGTCCG | + |
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Preference number: 5 (lower is better) Translates to: VGSSCASGCRPRGRG*PGPVAGCTRLPRRP Trigger: CGGACGCCTGGGAAGCCTGGTACAACCTGCCACGGGCCCCGGCCAGCCCCTTCCGCGAGGCCTACAACCGCTGGCACAGCTGCTACCAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS GCA 90 bp | AGGGGCAGTATGGTTCCAGGACCCACTCCCGGTAGTTCTGGGTGGTaGCGGGCGGGCGCTGGGGTGCCGACAGGGAGGGCACGTAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RGSMVPGPTPGSSGW*RAGAGVPTGRARSL Trigger: CAGACTACGTGCCCTCCCTGTCGGCACCCCAGCGCCCGCCCGGCACCACCCAGAACTACCGGGAGTGGGTCCTGGAACCATACTGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS GCA 90 bp | CCAGGCGTCCGAGTTGGTCAGGCCTGTGTACCACAGCTGGCCGGCTaGGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PGVRVGQACVPQLAG*VPSHGRVLPACGLP Trigger: AGGCAGGCCACACGCTGGAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCGGACGCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 90 bp | CAGGCTTCCCAGGCGTCCGAGTTGGTCAGGCCTGTGTACCACAGCTaGCCGGCTGCGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGTG | + |
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Preference number: 5 (lower is better) Translates to: QASQASELVRPVYHS*PAASRPMGVYFQRV Trigger: CACACGCTGGAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCGGACGCCTGGGAAGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS TCA 90 bp | CTGCGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTaGTGGCTGGTGGCCAGCGGGAACCCTCCAGGGACAGGTAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LRPVPWACTSSVWPA*WLVASGNPPGTGSH Trigger: ATGACTACCTGTCCCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACGCCCATGGGACGGGACGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 90 bp | TCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTGATGGCTGGTaGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: SHGRVLPACGLPDGW*PAGTLQGQVVIAVG Trigger: CCCTACAGCGATGACTACCTGTCCCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACGCCCATGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681976.1 |
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| CDS CCA 90 bp | TCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTGATGGCTGGTaGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGTACAG | + |
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Preference number: 5 (lower is better) Translates to: SHGRVLPACGLPDGW*PAGTLQGQVVIAVQ Trigger: CTGTACAGCGATGACTACCTGTCCCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACGCCCATGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329493.6 |
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| CDS CCA 72 bp | ACCGGGTGCTGGGGGCCTGGTACTGGGCAGGGACGATaGGGTCATGCCAGGCGGTCTCCCGCAGGTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TGCWGPGTGQGR*GHARRSPAGAG Trigger: CCCAGCACCTGCGGGAGACCGCCTGGCATGACCCCATCGTCCCTGCCCAGTACCAGGCCCCCAGCACCCGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS GCA 72 bp | ATGGTTCCAGGACCCACTCCCGGTAGTTCTGGGTGGTaGCGGGCGGGCGCTGGGGTGCCGACAGGGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: MVPGPTPGSSGW*RAGAGVPTGRA Trigger: TGCCCTCCCTGTCGGCACCCCAGCGCCCGCCCGGCACCACCCAGAACTACCGGGAGTGGGTCCTGGAACCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 72 bp | AGCTGTGCCAGCGGTTGTAGGCCTCGCGGAAGGGGCTaGCCGGGGCCCGTGGCAGGTTGTACCAGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SCASGCRPRGRG*PGPVAGCTRLP Trigger: GGGAAGCCTGGTACAACCTGCCACGGGCCCCGGCCAGCCCCTTCCGCGAGGCCTACAACCGCTGGCACAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS TCA 72 bp | CGGGCGCTGGGGTGCCGACAGGGAGGGCACGTAGTCTaGTGCCCTCCACAGTGGCTCCACCCCGTACCGGTT | + |
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Preference number: 6 (lower is better) Translates to: RALGCRQGGHVV*CPPQWLHPVPV Trigger: AACCGGTACGGGGTGGAGCCACTGTGGAGGGCATCAGACTACGTGCCCTCCCTGTCGGCACCCCAGCGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS GCA 72 bp | TCCCGTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTaGCTGATGGCTGGTGGCCAGCGGGAACCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRPMGVYFQRVA*LMAGGQREPSR Trigger: CCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACGCCCATGGGACGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS TCA 72 bp | GTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTaGTGGCTGGTGGCCAGCGGGAACCCTCCAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: VPWACTSSVWPA*WLVASGNPPGT Trigger: TGTCCCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACGCCCATGGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 72 bp | CAGGCGTCCGAGTTGGTCAGGCCTGTGTACCACAGCTaGCCGGCTGCGTCCCGTCCCATGGGCGTGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: QASELVRPVYHS*PAASRPMGVYF Trigger: GAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCGGACGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 72 bp | GGAAGGCGGGGACCGCTGGCAGGTGGAGGGGCAGTATaGTTCCAGGACCCACTCCCGGTAGTTCTGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRRGPLAGGGAV*FQDPLPVVLGG Trigger: ACCACCCAGAACTACCGGGAGTGGGTCCTGGAACCATACTGCCCCTCCACCTGCCAGCGGTCCCCGCCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS GCA 72 bp | CGAGTTGGTCAGGCCTGTGTACCACAGCTGGCCGGCTaGGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RVGQACVPQLAG*VPSHGRVLPAC Trigger: ACACGCTGGAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 72 bp | ACAGGTAGTCATCGCTGTACAGCGGTGCTGGGAAGCTaGCCTCGAGGGTCCCCGAGGGGATACAGGGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: TGSHRCTAVLGS*PRGSPRGYRAV Trigger: CACGGCCCTGTATCCCCTCGGGGACCCTCGAGGCCAGCTTCCCAGCACCGCTGTACAGCGATGACTACCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329493.6 |
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| CDS CCA 72 bp | GTGGCAGGTTGTACCAGGCTTCCCAGGCGTCCGAGTTaGTCAGGCCTGTGTACCACAGCTGGCCGGCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: VAGCTRLPRRPS*SGLCTTAGRLR Trigger: ACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCGGACGCCTGGGAAGCCTGGTACAACCTGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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| CDS CCA 72 bp | CGTGTACTTCCAGCGTGTGGCCTGCCTGATGGCTGGTaGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: RVLPACGLPDGW*PAGTLQGQVVI Trigger: GATGACTACCTGTCCCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329493.6 ENST00000681976.1 |
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