Pregenerated sensors for C19ORF53 (Homo sapiens)
Ensembl gene IDs: ENSG00000104979Ensembl transcript IDs: ENST00000221576.4, ENST00000588234.6, ENST00000588841.1, ENST00000588858.5, ENST00000592760.1, ENST00000593274.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGAGACTTGTaGGCTCACCTGGCCTGCTCACCCGAACACAGGACTGCAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GVGWSTPGHVTHGDL*AHLACSPEHRTARG Trigger: CCCTCTTGCAGTCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR CCA 90 bp | TTGCTGCTGCACGACGCGCGCCTTCTTGGGAGCGATAACACGACCTaGGGAAAGATGTGCTCACGTGAGGCCGGGAAGCCGGGGGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LLLHDARLLGSDNTT*GKMCSREAGKPGVH Trigger: GTGGACCCCCGGCTTCCCGGCCTCACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| 3UTR GCA 90 bp | ACGCCAGGCCACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTaGTCACCCGAACACAGGACTGCAAGAGGGATGACAAAGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: TPGHVTHGDLWAHLA*SPEHRTARGMTKPG Trigger: ACCTGGCTTTGTCATCCCTCTTGCAGTCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAGGGAGTGGGCGGTGGGGTGGGGTaGAGCACGCCAGGCCACGTC | + |
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Preference number: 2 (lower is better) Translates to: MSSLTLVVSPGVRTGQGVGGGVG*STPGHV Trigger: GACGTGGCCTGGCGTGCTCCACCCCACCCCACCGCC...CACTCCCTGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTAAAGGCGGTGGGGTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGATGTGGAGGCAGGACCTaGGAAGGGGCACGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: VAKGGGVGWSTPGHVTHGCGGRT*EGARGQ Trigger: CTGTCCCCGTGCCCCTTCCCAGGTCCTGCCTCCACA...TCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCACCCCACCGCCTTTAGCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR CAA 90 bp | GGTGGGGTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGAGACTaGTGGGCTCACCTGGCCTGCTCACCCGAACACAGGACTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GGVGWSTPGHVTHGD*WAHLACSPEHRTAR Trigger: TCTTGCAGTCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCACCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR CCA 90 bp | GCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACGTGAGTATGGAGGTAGGGGGTaGGATGTTGGCCTGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: ARLLGSDNTTWGKMCSREYGGRG*DVGLHW Trigger: CCAGTGCAGGCCAACATCCCACCCCCTACCTCCATA...CTCACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAGGGAGTGAGGCCACGTCACTCATaGAGACTTGTGGGCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: MSSLTLVVSPGVRTGQGVRPRHS*RLVGSP Trigger: AGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCT...CACTCCCTGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGGGAGTGAGTCACCCGGGGTTAAATGGAGAAAAGACTCTTTCCCGGCTTATGGAGGTAGGGGGTaGGATGTTGGCCTGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: WPGSESPGVKWRKDSFPAYGGRG*DVGLHW Trigger: CCAGTGCAGGCCAACATCCCACCCCCTACCTCCATA...AGCCGGGAAAGAGTCTTTTCTCCATTTAACCCCGGGTGACTCACTCCCTGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGGGAGTGAGTCACCCGGGGTTAAATGGAGAAAAGACTCTTTCCCGGCTACTTGTGGGCTCACCTaGCCTGCTCACCCGAACACA | + |
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Preference number: 2 (lower is better) Translates to: WPGSESPGVKWRKDSFPATCGLT*PAHPNT Trigger: TGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGT...AGCCGGGAAAGAGTCTTTTCTCCATTTAACCCCGGGTGACTCACTCCCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAAAGACTCTTTCCCGGCTCTCAGGCTCAGGGCCAGAGGTGTAGAAGCCCAGGGACTGCAAGAGGGATaGCAAAGCCAGGTTTATTGT | + |
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Preference number: 2 (lower is better) Translates to: RKDSFPALRLRARGVEAQGLQEG*QSQVYC Trigger: ACAATAAACCTGGCTTTGTCATCCCTCTTGCAGTCC...CTGGGCTTCTACACCTCTGGCCCTGAGCCTGAGAGCCGGGAAAGAGTCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR-3UTR CAA 90 bp | ACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTCACCCGAACACAGGAGTAGGGGGTGGGATGTaGGCCTGCACTGGGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: TSLMETCGLTWPAHPNTGVGGGM*ACTGAS Trigger: GCTGGCCCCAGTGCAGGCCAACATCCCACCCCCTAC...TCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR GCA 72 bp | CTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTaGTCACGTGAGGCCGGGAAGCCGGGGGTCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: LLGSDNTTWGKM*SREAGKPGVHL Trigger: GAGGTGGACCCCCGGCTTCCCGGCCTCACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| 3UTR-3UTR CAA 90 bp | GCATCTGACCTACTGATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGGGGTTCTCAGCACCCTaGGCCCCCACTGAAGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: ASDLLMSSLTLVVSPGVRGFSAP*APTEVL Trigger: TAGAACTTCAGTGGGGGCCAAGGGTGCTGAGAACCC...CCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACATCAGTAGGTCAGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR GCA 72 bp | CACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTaGTCACCCGAACACAGGACTGCAAGAGGGATGACA | + |
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Preference number: 3 (lower is better) Translates to: HVTHGDLWAHLA*SPEHRTARGMT Trigger: TGTCATCCCTCTTGCAGTCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR CCA 72 bp | GAGGACTGGCCAGGGAGTGAGTCACCCGGGGTTAAATaGAGAAAAGACTCTTTCCCGGCTCTCAGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: EDWPGSESPGVK*RKDSFPALRLR Trigger: CCTGAGCCTGAGAGCCGGGAAAGAGTCTTTTCTCCATTTAACCCCGGGTGACTCACTCCCTGGCCAGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR GCA 72 bp | CGGATTCCGACTTCTAGGTTCTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTCTTGGGAGCGATAACA | + |
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Preference number: 3 (lower is better) Translates to: RIPTSRFFLSFC*CTTRAFLGAIT Trigger: TGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAACCTAGAAGTCGGAATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR CCA 90 bp | CAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAGGGAGTGAGTCAGGCGGTGGGGTGGGGTaGAGCACGCCAGGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: QLDSGCVPRGEDWPGSESGGGVG*STPGHV Trigger: GACGTGGCCTGGCGTGCTCCACCCCACCCCACCGCC...TGACTCACTCCCTGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | GTTGCTAAAGGCGGTGGGGTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGACTAAAGGCGGTGGGGTaGGGTGGAGCACGCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VAKGGGVGWSTPGHVTHGLKAVG*GGARQA Trigger: GGCCTGGCGTGCTCCACCCCACCCCACCGCCTTTAG...TCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCACCCCACCGCCTTTAGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| 3UTR CAA 72 bp | GGGTGGAGCACGCCAGGCCACGTCACTCATGGAGACTaGTGGGCTCACCTGGCCTGCTCACCCGAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: GWSTPGHVTHGD*WAHLACSPEHR Trigger: CCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGTGCTCCACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | GTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGAGACTTGTGGGCTCACCTGGATGTTGGCCTGCACTaGGGCCAGCGTCCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VGWSTPGHVTHGDLWAHLDVGLH*GQRPQE Trigger: TTCCTGAGGACGCTGGCCCCAGTGCAGGCCAACATC...CAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTGTGGAGGCAGGACCTaGGAAGGGGCACGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHCGGRT*EGARGQ Trigger: CTGTCCCCGTGCCCCTTCCCAGGTCCTGCCTCCACA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000221576.4 ENST00000588234.6 ENST00000588858.5 ENST00000593274.1 |
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| CDS-3UTR TCA 90 bp | ACGACGCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACAAAGATGTGCTCACGTaGGGCCGGGAAGCCGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TTRAFLGAITRPGERCAHKDVLT*GREAGG Trigger: ACCCCCGGCTTCCCGGCCTCACGTGAGCACATCTTT...GTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR GCA 90 bp | GGAGCACGCCAGGCCACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GARQATSLMETCGLTWPAFLSFC*CTTRAF Trigger: GAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAA...AGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | GCATCTGACCTACTGATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGTGTGGAGGCAGGACCTaGGAAGGGGCACGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: ASDLLMSSLTLVVSPGVRCGGRT*EGARGQ Trigger: CTGTCCCCGTGCCCCTTCCCAGGTCCTGCCTCCACA...CCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACATCAGTAGGTCAGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | ACCTGGGGAAAGATGTGCTCACGTGAGGCCGGGAAGCCGGGGGTCCACCTCGCCAGCGATAACACGACCTaGGGAAAGATGTGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: TWGKMCSREAGKPGVHLASDNTT*GKMCSR Trigger: ACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCT...GGCGAGGTGGACCCCCGGCTTCCCGGCCTCACGTGAGCACATCTTTCCCCAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR CCA 90 bp | GTTGCTAAAGGCGGTGGGGTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGAAGGCCACGTCACTCATaGAGACTTGTGGGCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: VAKGGGVGWSTPGHVTHGRPRHS*RLVGSP Trigger: AGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCT...TCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCACCCCACCGCCTTTAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | CAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAGGGAGTGAGTCATTCAGAGGCTGCCGCTaGCGTCTTACTCTTTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: QLDSGCVPRGEDWPGSESFRGCR*RLTLCG Trigger: CCCGCAAAGAGTAAGACGGCAGCGGCAGCCTCTGAA...TGACTCACTCCCTGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTCTAGGTTCCCTCTCTaGGCCCCGGGCTCCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHSRFPL*APGSIL Trigger: AAGGATGGAGCCCGGGGCGCAGAGAGGGAACCTAGA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593274.1 |
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| CDS-3UTR GCA 90 bp | ACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTCACCCGAACACAGGATGGGCTCACCTGGCCTaGTCACCCGAACACAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TSLMETCGLTWPAHPNTGWAHLA*SPEHRT Trigger: AGTCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCA...TCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACGATGTTGGCCTGCACTaGGGCCAGCGTCCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHDVGLH*GQRPQE Trigger: TTCCTGAGGACGCTGGCCCCAGTGCAGGCCAACATC...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000221576.4 ENST00000588234.6 ENST00000588841.1 ENST00000588858.5 ENST00000593274.1 |
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| CDS-3UTR CCA 90 bp | ACGACGCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACGATGTTGGCCTGCACTaGGGCCAGCGTCCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TTRAFLGAITRPGERCAHDVGLH*GQRPQE Trigger: TTCCTGAGGACGCTGGCCCCAGTGCAGGCCAACATC...GTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR CCA 90 bp | GCCACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTCACCCGAACACATATGGAGGTAGGGGGTaGGATGTTGGCCTGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: ATSLMETCGLTWPAHPNTYGGRG*DVGLHW Trigger: CCAGTGCAGGCCAACATCCCACCCCCTACCTCCATA...TGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | TGGCCAGGGAGTGAGTCACCCGGGGTTAAATGGAGAAAAGACTCTTTCCCGGCTCCCAGGGGTGAGGACTaGCCAGGGAGTGAGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: WPGSESPGVKWRKDSFPAPRGED*PGSESP Trigger: GGGTGACTCACTCCCTGGCCAGTCCTCACCCCTGGG...AGCCGGGAAAGAGTCTTTTCTCCATTTAACCCCGGGTGACTCACTCCCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTTCAGAGGCTGCCGCTaGCGTCTTACTCTTTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHFRGCR*RLTLCG Trigger: CCCGCAAAGAGTAAGACGGCAGCGGCAGCCTCTGAA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000221576.4 ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACACCTGGGGAAAGATGTaGTCACGTGAGGCCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHTWGKM*SREAGK Trigger: CTTCCCGGCCTCACGTGAGCACATCTTTCCCCAGGT...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACCTCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHLFLSF*CCTTRA Trigger: GGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAG...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS-3UTR CCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTATGGAGGTAGGGGGTaGGATGTTGGCCTGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHYGGRG*DVGLHW Trigger: CCAGTGCAGGCCAACATCCCACCCCCTACCTCCATA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000221576.4 ENST00000588234.6 ENST00000588841.1 ENST00000588858.5 ENST00000593274.1 |
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| CDS-3UTR CCA 90 bp | CCTACTGATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAACTTGTGGGCTCACCTaGCCTGCTCACCCGAACACA | + |
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Preference number: 4 (lower is better) Translates to: PTDVQLDSGCVPRGEDWPTCGLT*PAHPNT Trigger: TGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGT...TGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACATCAGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR TCA 90 bp | GTTGCTAAAGGCGGTGGGGTGGGGTGGAGCACGCCAGGCCACGTCACTCATGGAGGACTGCAAGAGGGATaGCAAAGCCAGGTTTATTGT | + |
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Preference number: 4 (lower is better) Translates to: VAKGGGVGWSTPGHVTHGGLQEG*QSQVYC Trigger: ACAATAAACCTGGCTTTGTCATCCCTCTTGCAGTCC...TCCATGAGTGACGTGGCCTGGCGTGCTCCACCCCACCCCACCGCCTTTAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | CACGACGCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCATTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: HDARLLGSDNTTWGKMCSFLSFC*CTTRAF Trigger: GAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAA...TGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHFLSFC*CTTRAF Trigger: GAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000588234.6 ENST00000588841.1 ENST00000588858.5 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTTCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHFFLSF*CCTTRA Trigger: GGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588234.6 ENST00000588841.1 |
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| CDS-3UTR GCA 90 bp | GCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACGTGAGTTCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ARLLGSDNTTWGKMCSREFFLSF*CCTTRA Trigger: GGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAA...CTCACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR CCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACACTCATGGAGACTTGTaGGCTCACCTGGCCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHTHGDL*AHLACS Trigger: TGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGT...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACTGCCGTCTTACTCTTTaGGGGTTTGTGCGCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHCRLTL*GFVRLK Trigger: TTTCAGGCGCACAAACCCGCAAAGAGTAAGACGGCA...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000221576.4 ENST00000588234.6 |
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| CDS-3UTR CCA 90 bp | CAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAGGGAGTGAGTCATCACCCGGGGTTAAATaGAGAAAAGACTCTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QLDSGCVPRGEDWPGSESSPGVK*RKDSFP Trigger: CGGGAAAGAGTCTTTTCTCCATTTAACCCCGGGTGA...TGACTCACTCCCTGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR TCA 90 bp | CACGACGCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACTTCTAGGTTCTTCTTaGGCTTTTGCTGCTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: HDARLLGSDNTTWGKMCSLLGSS*AFAAAR Trigger: TCGTGCAGCAGCAAAAGCTCAAGAAGAACCTAGAAG...TGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR TCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACAAACCTGTCTCTTCTTaGGCTTTTGCTGCTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHKPVSS*AFAAAR Trigger: TCGTGCAGCAGCAAAAGCTCAAGAAGAGACAGGTTT...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS-3UTR GCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACATTCTTTTCAGAGGCTaGCGCTGCCGTCTTACTCTT | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHILFRG*RCRLTL Trigger: AAGAGTAAGACGGCAGCGGCAGCCTCTGAAAAGAAT...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000221576.4 ENST00000588234.6 ENST00000588858.5 |
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| CDS-3UTR CCA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACAAAACAACCATAGGGTaGCTCACGCCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHKTTIG*LTPVIP Trigger: TGGGATTACAGGCGTGAGCCACCCTATGGTTGTTTT...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS-3UTR GCA 90 bp | GGTGAGGACTGGCCAGGGAGTGAGTCACCCGGGGTTAAATGGAGAAAAGACTCTTGCCGTCTTACTCTTTaGGGGTTTGTGCGCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GEDWPGSESPGVKWRKDSCRLTL*GFVRLK Trigger: TTTCAGGCGCACAAACCCGCAAAGAGTAAGACGGCA...AGAGTCTTTTCTCCATTTAACCCCGGGTGACTCACTCCCTGGCCAGTCCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR GCA 90 bp | GCCTGCTCACCCGAACACAGGACTGCAAGAGGGATGACAAAGCCAGGTTTATTGACCCGAACACAGGACTaGAAGAGGGATGACAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ACSPEHRTARGMTKPGLLTRTQD*KRDDKA Trigger: GGCTTTGTCATCCCTCTTGCAGTCCTGTGTTCGGGT...CAATAAACCTGGCTTTGTCATCCCTCTTGCAGTCCTGTGTTCGGGTGAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR TCA 90 bp | GCCTGCTCACCCGAACACAGGACTGCAAGAGGGATGACAAAGCCAGGTTTATTGCTTCTAGGTTCTTCTTaGGCTTTTGCTGCTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: ACSPEHRTARGMTKPGLLLLGSS*AFAAAR Trigger: TCGTGCAGCAGCAAAAGCTCAAGAAGAACCTAGAAG...CAATAAACCTGGCTTTGTCATCCCTCTTGCAGTCCTGTGTTCGGGTGAGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | GCCACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTCACCCGAACACAGTAGGGGGTGGGATGTaGGCCTGCACTGGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ATSLMETCGLTWPAHPNTVGGGM*ACTGAS Trigger: GCTGGCCCCAGTGCAGGCCAACATCCCACCCCCTAC...TGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACGTAGGGGGTGGGATGTaGGCCTGCACTGGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHVGGGM*ACTGAS Trigger: GCTGGCCCCAGTGCAGGCCAACATCCCACCCCCTAC...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENST00000221576.4 ENST00000588234.6 ENST00000588841.1 ENST00000588858.5 ENST00000593274.1 |
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| CDS-3UTR CAA 90 bp | ATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTGGCCAGGGAGTGACGACGCGCGCCTTCTaGGGAGCGATAACACGACCG | + |
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Preference number: 5 (lower is better) Translates to: MSSLTLVVSPGVRTGQGVTTRAF*GAITRP Trigger: CGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGT...CACTCCCTGGCCAGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACACGACGCGCGCCTTCTaGGGAGCGATAACACGACCG | + |
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Preference number: 5 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHTTRAF*GAITRP Trigger: CGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGT...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000588234.6 ENST00000588858.5 |
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| CDS-3UTR CAA 90 bp | GCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACGTGAGACGACGCGCGCCTTCTaGGGAGCGATAACACGACCT | + |
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Preference number: 5 (lower is better) Translates to: ARLLGSDNTTWGKMCSRETTRAF*GAITRP Trigger: AGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGT...CTCACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS-3UTR CAA 90 bp | GGAGCACGCCAGGCCACGTCACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTCTACTGATGTCCAGCTaGACTCTGGTTGTGTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: GARQATSLMETCGLTWPALLMSS*TLVVSP Trigger: TGGGGACACAACCAGAGTCAAGCTGGACATCAGTAG...AGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGACGTGGCCTGGCGTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACGGGTTCTCAGCACCCTaGGCCCCCACTGAAGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHGFSAP*APTEVL Trigger: TAGAACTTCAGTGGGGGCCAAGGGTGCTGAGAACCC...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000221576.4 ENST00000588234.6 ENST00000588841.1 ENST00000588858.5 ENST00000593274.1 |
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| CDS GCA 90 bp | CAGCCCGAGCAGCATAGTGAAACCTGTCTCTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTCTTGGGAGCGATAACACGACCGCCT | + |
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Preference number: 5 (lower is better) Translates to: QPEQHSETCLFLSFC*CTTRAFLGAITRPP Trigger: AGGCGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAGACAGGTTTCACTATGCTGCTCGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS GCA 90 bp | GACCAGCCCGAGCAGCATAGTGAAACCTGTCTCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCCTTCTTGGGAGCGATAACACGACCG | + |
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Preference number: 5 (lower is better) Translates to: DQPEQHSETCLFLSF*CCTTRAFLGAITRP Trigger: CGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAGACAGGTTTCACTATGCTGCTCGGGCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS GCA 90 bp | CAAGACCAGCCCGAGCAGCATAGTGAAACCTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTCTTGGGAGCGATAACACGACCGCCT | + |
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Preference number: 5 (lower is better) Translates to: QDQPEQHSETFLSFC*CTTRAFLGAITRPP Trigger: AGGCGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGGTTTCACTATGCTGCTCGGGCTGGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592760.1 |
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| CDS-3UTR CAA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACCTGCCGTCTTACTCTTaGCGGGTTTGTGCGCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHLPSYS*RVCAPE Trigger: TTCAGGCGCACAAACCCGCAAAGAGTAAGACGGCAG...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000221576.4 ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | TGGCCAGGGAGTGAGTCACCCGGGGTTAAATGGAGAAAAGACTCTTTCCCGGCTGTCACTCATGGAGACTaGTGGGCTCACCTGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: WPGSESPGVKWRKDSFPAVTHGD*WAHLAC Trigger: GCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTGAC...AGCCGGGAAAGAGTCTTTTCTCCATTTAACCCCGGGTGACTCACTCCCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS GCA 90 bp | GTTCAAGACCAGCCCGAGCAGCATAGTGAAACCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCCTTCTTGGGAGCGATAACACGACCG | + |
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Preference number: 5 (lower is better) Translates to: VQDQPEQHSETFLSF*CCTTRAFLGAITRP Trigger: CGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGGTTTCACTATGCTGCTCGGGCTGGTCTTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592760.1 |
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| CDS-3UTR CAA 90 bp | TCTGACCTACTGATGTCCAGCTTGACTCTGGTTGTGTCCCCAGGGGTGAGGACTCTGCCGTCTTACTCTTaGCGGGTTTGTGCGCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SDLLMSSLTLVVSPGVRTLPSYS*RVCAPE Trigger: TTCAGGCGCACAAACCCGCAAAGAGTAAGACGGCAG...AGTCCTCACCCCTGGGGACACAACCAGAGTCAAGCTGGACATCAGTAGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | CACTCATGGAGACTTGTGGGCTCACCTGGCCTGCTCACCCGAACACAGGACTGCACTTCTAGGTTCTTCTaGAGCTTTTGCTGCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: HSWRLVGSPGLLTRTQDCTSRFF*SFCCCT Trigger: CGTGCAGCAGCAAAAGCTCAAGAAGAACCTAGAAGT...GCAGTCCTGTGTTCGGGTGAGCAGGCCAGGTGAGCCCACAAGTCTCCATGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588234.6 |
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| CDS-3UTR CAA 90 bp | GGGATGACTTGCAAGGTCCCATATGGAGGTAGGGGGTGGGATGTTGGCCTGCACGAAACCTGTCTCTTCTaGAGCTTTTGCTGCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: GMTCKVPYGGRGWDVGLHETCLF*SFCCCT Trigger: CGTGCAGCAGCAAAAGCTCAAGAAGAGACAGGTTTC...GTGCAGGCCAACATCCCACCCCCTACCTCCATATGGGACCTTGCAAGTCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS-3UTR CAA 90 bp | ACGCGCGCCTTCTTGGGAGCGATAACACGACCTGGGGAAAGATGTGCTCACGTGACTTCTAGGTTCTTCTaGAGCTTTTGCTGCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: TRAFLGAITRPGERCAHVTSRFF*SFCCCT Trigger: CGTGCAGCAGCAAAAGCTCAAGAAGAACCTAGAAGT...CACGTGAGCACATCTTTCCCCAGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588841.1 |
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| CDS GCA 72 bp | CAGCCCGAGCAGCATAGTGAAACCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCCTTCTTGGGAGCGATA | + |
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Preference number: 6 (lower is better) Translates to: QPEQHSETFLSF*CCTTRAFLGAI Trigger: TATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGGTTTCACTATGCTGCTCGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592760.1 |
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| CDS GCA 72 bp | CCCGAGCAGCATAGTGAAACCTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTCTTGGGAGCGATAACA | + |
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Preference number: 6 (lower is better) Translates to: PEQHSETFLSFC*CTTRAFLGAIT Trigger: TGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGGTTTCACTATGCTGCTCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592760.1 |
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| CDS GCA 72 bp | GAGCAGCATAGTGAAACCTGTCTCTTCTTGAGCTTTTaGTGCTGCACGACGCGCGCCTTCTTGGGAGCGATA | + |
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Preference number: 6 (lower is better) Translates to: EQHSETCLFLSF*CCTTRAFLGAI Trigger: TATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAGACAGGTTTCACTATGCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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| CDS GCA 72 bp | CAGCATAGTGAAACCTGTCTCTTCTTGAGCTTTTGCTaGTGCACGACGCGCGCCTTCTTGGGAGCGATAACA | + |
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Preference number: 6 (lower is better) Translates to: QHSETCLFLSFC*CTTRAFLGAIT Trigger: TGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCAAAAGCTCAAGAAGAGACAGGTTTCACTATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588858.5 |
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