RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C19ORF47 (Homo sapiens)

Ensembl gene IDs: ENSG00000160392

Ensembl transcript IDs: ENST00000357884.8, ENST00000392035.6, ENST00000580606.5, ENST00000580977.1, ENST00000582006.5, ENST00000582734.1, ENST00000582783.5, ENST00000584868.1, ENST00000683109.1

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGAGGCCCTGCTCACTACCTGCTACCAGCTCCTAGGACAGGCCTaGCTCAGGGGCGCTGTGCAGCAGGGAGGGGTGGGCGACCAAACC +
Preference number: 1 (lower is better)
Translates to: GEALLTTCYQLLGQA*LRGAVQQGGVGDQT
Trigger: GGTTTGGTCGCCCACCCCTCCCTGCTGCACAGCGCCCCTGAGCCAGGCCTGTCCTAGGAGCTGGTAGCAGGTAGTGAGCAGGGCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 90 bp AAGGTCCTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTaGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTGCTCCCCCGG +
Preference number: 1 (lower is better)
Translates to: KVLRPSLLNTLTVPA*SIWAPRPSLELLPR
Trigger: CCGGGGGAGCAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAGGACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CCA 90 bp CTGCTCCCCACTGCCATGCCCTCGCAGCCATCCTGGCTTCCTGCCTaGACTGCTGCAGTGGCATCCACCCCAGCCCTCCCAGCCATTCCT +
Preference number: 1 (lower is better)
Translates to: LLPTAMPSQPSWLPA*TAAVASTPALPAIP
Trigger: AGGAATGGCTGGGAGGGCTGGGGTGGATGCCACTGCAGCAGTCCAGGCAGGAAGCCAGGATGGCTGCGAGGGCATGGCAGTGGGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR TCA 90 bp CACCCCGCCCACAGGTGGGCTAGAAGGTCCTGCGGCCCAGTCTTTTaGACACGCTCACAGTGCCCGCGTGGTCCATCTGGGCACCAAGGC +
Preference number: 1 (lower is better)
Translates to: HPAHRWARRSCGPVF*TRSQCPRGPSGHQG
Trigger: GCCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAGGACCTTCTAGCCCACCTGTGGGCGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 90 bp GGCCAGGCCAGCTGCGACGACCATCCCAGGCTAGGAGAAATGGGGTaGTCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGAC +
Preference number: 1 (lower is better)
Translates to: GQASCDDHPRLGEMG*SPECSGLALEPEGD
Trigger: GTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCGCAGCTGGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR GCA 90 bp CCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATaGCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGT +
Preference number: 1 (lower is better)
Translates to: PVPLAHHPPYTFRDR*PGQENGCASAAAQG
Trigger: ACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
3UTR GCA 90 bp CACTGCCATGCCCTCGCAGCCATCCTGGCTTCCTGCCTGGACTGCTaGAGTGGCATCCACCCCAGCCCTCCCAGCCATTCCTTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: HCHALAAILASCLDC*SGIHPSPPSHSFSS
Trigger: TGAGGAGAAGGAATGGCTGGGAGGGCTGGGGTGGATGCCACTGCAGCAGTCCAGGCAGGAAGCCAGGATGGCTGCGAGGGCATGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR GCA 90 bp CACCACGCCCAGCCAAGGCCCTTGGCTTTGATTCCAGCTGTACCCTaGGCACTGTCAGCAGCCATGAACCCCCAGCCCAGGTGTCCGCCT +
Preference number: 1 (lower is better)
Translates to: HHAQPRPLALIPAVP*ALSAAMNPQPRCPP
Trigger: AGGCGGACACCTGGGCTGGGGGTTCATGGCTGCTGACAGTGCGCAGGGTACAGCTGGAATCAAAGCCAAGGGCCTTGGCTGGGCGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 90 bp GTGACCTTGACCTCGGCTGAGGACTTACTCTTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGCACAAGGGCAGCTGCGCCCAGTCTC +
Preference number: 1 (lower is better)
Translates to: VTLTSAEDLLLVLVT*LSWASGTRAAAPSL
Trigger: GAGACTGGGCGCAGCTGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 90 bp GCTGACTTTAGACAAGGACTCCGGCTTCCTCTCAAGCCCAGACCGTaGGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGT +
Preference number: 1 (lower is better)
Translates to: ADFRQGLRLPLKPRP*GKRQAPQCRGSSRC
Trigger: ACAACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGGGCTTGAGAGGAAGCCGGAGTCCTTGTCTAAAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 90 bp CTCCCGATCCAGCACTCCCGGGTCACTGTGCACATTCCTCCTCCTTaGTCACAACACCCCCAGCCACCTAGCCCCTGCCCACCCACCTCT +
Preference number: 1 (lower is better)
Translates to: LPIQHSRVTVHIPPP*SQHPQPPSPCPPTS
Trigger: AGAGGTGGGTGGGCAGGGGCTAGGTGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGCACAGTGACCCGGGAGTGCTGGATCGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR GCA 90 bp CCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATaGGCCTCAGCCGCAGCCCAGGGTCTGGAGAGGTCCCTCCAGCCT +
Preference number: 1 (lower is better)
Translates to: PPYTFRDRCPGQENG*ASAAAQGLERSLQP
Trigger: AGGCTGGAGGGACCTCTCCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
3UTR TCA 90 bp CCGGGGCCCCACCAGAGTCCTCTTAATGGTGACCTTGACCTCGGCTaGGGACTTACTCTTGGTGCTGGTGACCTGGCTGTCCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: PGPHQSPLNGDLDLG*GLTLGAGDLAVLGL
Trigger: GAGGCCCAGGACAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTCACCATTAAGAGGACTCTGGTGGGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 90 bp CTCCTCCCGGCGGGCCAGGGCTGCAGTGGCCTTGGCACTCTTTGCTaGCATCTTGTTGGACACAGTGACCGAGATCTTGGAGGTGCTGGT +
Preference number: 1 (lower is better)
Translates to: LLPAGQGCSGLGTLC*HLVGHSDRDLGGAG
Trigger: ACCAGCACCTCCAAGATCTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 90 bp GGTGCTGGTGACCTGGCTGTCCTGGGCCTCGGGCACAAGGGCAGCTaGGCCCAGTCTCTTGATGATGCTGACTTTAGACAAGGACTCCGG +
Preference number: 1 (lower is better)
Translates to: GAGDLAVLGLGHKGS*AQSLDDADFRQGLR
Trigger: CCGGAGTCCTTGTCTAAAGTCAGCATCATCAAGAGACTGGGCGCAGCTGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCACCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 90 bp CAGGCGGCTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTaGCTTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATG +
Preference number: 1 (lower is better)
Translates to: QAAEDSCGFTPCRGV*LGLGAEAVKHRRPM
Trigger: CATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAGCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 90 bp GCCTTGGCTGGGCCCCGTCCTAGCTTCTTCAGGACCCCGGCATACTaGAAGACAGAGCTGCTGCTGTCATTGTCGCTGTCCCAAGCCAGA +
Preference number: 1 (lower is better)
Translates to: ALAGPRPSFFRTPAY*KTELLLSLSLSQAR
Trigger: TCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGTCCTGAAGAAGCTAGGACGGGGCCCAGCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CCA 90 bp ACAGCCAGAGAAGAAAGCACAGAGGACATGAGAGAAGGGGAGTCCTaGAGCAGGCCAGGCCAGCTGCGACGACCATCCCAGGCTAGGAGA +
Preference number: 1 (lower is better)
Translates to: TAREESTEDMREGES*SRPGQLRRPSQARR
Trigger: TCTCCTAGCCTGGGATGGTCGTCGCAGCTGGCCTGGCCTGCTCCAGGACTCCCCTTCTCTCATGTCCTCTGTGCTTTCTTCTCTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR CCA 90 bp TCAGATTCCTTGGCCAGCACCACCGCTTTACCTACACCCCATCCCTaGAGAGGCCCTGCTCACTACCTGCTACCAGCTCCTAGGACAGGC +
Preference number: 1 (lower is better)
Translates to: SDSLASTTALPTPHP*RGPAHYLLPAPRTG
Trigger: GCCTGTCCTAGGAGCTGGTAGCAGGTAGTGAGCAGGGCCTCTCCAGGGATGGGGTGTAGGTAAAGCGGTGGTGCTGGCCAAGGAATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 90 bp ACCCCTTCTGCAAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTaGCCACTTTCTCCCACTCCTCAGATTCCTTGGCCAGCACCACCG +
Preference number: 1 (lower is better)
Translates to: TPSARPSYPQPLKRP*PLSPTPQIPWPAPP
Trigger: CGGTGGTGCTGGCCAAGGAATCTGAGGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTTGCAGAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR TCA 90 bp GCCTCCATGTCACCCCTTCTGCAAGGCCTTCCTATCCACAACCACTaGAGCGGCCCTGGCCACTTTCTCCCACTCCTCAGATTCCTTGGC +
Preference number: 1 (lower is better)
Translates to: ASMSPLLQGLPIHNH*SGPGHFLPLLRFLG
Trigger: GCCAAGGAATCTGAGGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTTGCAGAAGGGGTGACATGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 90 bp GCTGTGCAGCAGGGAGGGGTGGGCGACCAAACCAGTGGAAACTCATaGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGGC +
Preference number: 1 (lower is better)
Translates to: AVQQGGVGDQTSGNS*SHKRSPSFGKVPAG
Trigger: GCCTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTTGGTCGCCCACCCCTCCCTGCTGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 90 bp GCTCAGGGGCGCTGTGCAGCAGGGAGGGGTGGGCGACCAAACCAGTaGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGT +
Preference number: 1 (lower is better)
Translates to: AQGRCAAGRGGRPNQ*KLMVSQTEPIIWKG
Trigger: ACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTTGGTCGCCCACCCCTCCCTGCTGCACAGCGCCCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR GCA 90 bp CCCGTCCTAGCTTCTTCAGGACCCCGGCATACTGCAAGACAGAGCTaGTGCTGTCATTGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTT +
Preference number: 1 (lower is better)
Translates to: PVLASSGPRHTARQS*CCHCRCPKPDPRPF
Trigger: AAACGGACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGTCCTGAAGAAGCTAGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 90 bp AAAACAGCAGCTGTCTTCACTCTAGGCACTGGCCTCCCTTCCCAGTaGCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCC +
Preference number: 1 (lower is better)
Translates to: KTAAVFTLGTGLPSQ*PLPTTRHTLSETDA
Trigger: GGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAGACAGCTGCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
3UTR GCA 90 bp GTCCTAGCTTCTTCAGGACCCCGGCATACTGCAAGACAGAGCTGCTaGTGTCATTGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTTCTG +
Preference number: 1 (lower is better)
Translates to: VLASSGPRHTARQSC*CHCRCPKPDPRPFL
Trigger: CAGAAACGGACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGTCCTGAAGAAGCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 90 bp AGCCGTTCCCCCAGATGCTCCGGTCTAACATCTAGGCGGGCCCTATaGTTCTCATCTTCTCTAGCCCCAACTTCCAACCCATCAGCACAT +
Preference number: 1 (lower is better)
Translates to: SRSPRCSGLTSRRAL*FSSSLAPTSNPSAH
Trigger: ATGTGCTGATGGGTTGGAAGTTGGGGCTAGAGAAGATGAGAATCATAGGGCCCGCCTAGATGTTAGACCGGAGCATCTGGGGGAACGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 90 bp TCTGAAAGCTCTCCTCCTGAACTTCATGAAGCCACATTCCCAACTTaGCCTCCATGTCACCCCTTCTGCAAGGCCTTCCTATCCACAACC +
Preference number: 1 (lower is better)
Translates to: SESSPPELHEATFPT*PPCHPFCKAFLSTT
Trigger: GGTTGTGGATAGGAAGGCCTTGCAGAAGGGGTGACATGGAGGCCAAGTTGGGAATGTGGCTTCATGAAGTTCAGGAGGAGAGCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR CCA 90 bp AGTGCCCGCGTGGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTGCTCCCCCGGCTGGGGACTGGCCTTaGCTGGGCCCCGTCCTAGCT +
Preference number: 2 (lower is better)
Translates to: SARVVHLGTKALAGAAPPAGDWP*LGPVLA
Trigger: AGCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGC...CGGGGGAGCAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR TCA 90 bp GTGCCCGCGTGGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTGCTCCCCCGGGACCTTGACCTCGGCTaGGGACTTACTCTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: VPAWSIWAPRPSLELLPRDLDLG*GLTLGA
Trigger: AGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTC...CCGGGGGAGCAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp CAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCCCCCAGGCGGCTGAAGACTCCTCCGGCGGGCCAGGGCTaGAGTGGCCTTGGCACTCTT +
Preference number: 2 (lower is better)
Translates to: QARSSSVSGVAPRRLKTPPAGQG*SGLGTL
Trigger: AAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCGG...AGGAGTCTTCAGCCGCCTGGGGGCCACCCCAGAAACGGACGAGGATCTGGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp CTGTCCCAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCCCCCAGGCGGCTGAAGAGATCTTGGAGGTGCTaGTGTCCGGGCGCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: LSQARSSSVSGVAPRRLKRSWRC*CPGAWG
Trigger: CCCCCAGGCGCCCGGACACCAGCACCTCCAAGATCT...CTTCAGCCGCCTGGGGGCCACCCCAGAAACGGACGAGGATCTGGCTTGGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGGCGGCCAGGGCAGATaGCCGCAGGCTCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQGGQGR*PQALLP
Trigger: AGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCC...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR-3UTR GCA 90 bp ATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCGGCGGCCAGGGCAGATaGCCGCAGGCTCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: MLGPSSRARGRQAVSSRSGGQGR*PQALLP
Trigger: AGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCC...GCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR-3UTR TCA 90 bp CTAGAAGGTCCTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTGGTCCCTCCATCTCAGCAGTaGCCCGGCGCCGCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: LEGPAAQSFEHAHSARVVPPSQQ*PGAAWQ
Trigger: CTGCCAAGCGGCGCCGGGTCACTGCTGAGATGGAGG...GACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAGGACCTTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp CTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTGGTCCATCTGGGCAGCTGCTCCAGGATCTTaGGGGTGCGGGGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LRPSLLNTLTVPAWSIWAAAPGS*GCGVWC
Trigger: GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGC...TGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CAA 90 bp CGGGCCAGGGCTGCAGTGGCCTTGGCACTCTTTGCTGCCATCTTGTaGGACACAGTGACCGAGATCTTGGAGGTGCTGGTGTCCGGGCGC +
Preference number: 2 (lower is better)
Translates to: RARAAVALALFAAIL*DTVTEILEVLVSGR
Trigger: GCGCCCGGACACCAGCACCTCCAAGATCTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CAA 90 bp CGGCGGGCCAGGGCTGCAGTGGCCTTGGCACTCTTTGCTGCCATCTaGTTGGACACAGTGACCGAGATCTTGGAGGTGCTGGTGTCCGGG +
Preference number: 2 (lower is better)
Translates to: RRARAAVALALFAAI*LDTVTEILEVLVSG
Trigger: CCCGGACACCAGCACCTCCAAGATCTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CAA 90 bp TGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCCTTTGGGCATGTaGATGACGTACTTCCCCTCCATCTCAGCAGTGACCCGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: CSRILRVRGVVPLGM*MTYFPSISAVTRRR
Trigger: GCGGCGCCGGGTCACTGCTGAGATGGAGGGGAAGTACGTCATCAACATGCCCAAAGGCACCACACCCCGCACCCGCAAGATCCTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAACCGAGATCTTGGAGGTaGTGGTGTCCGGGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQPRSWR*WCPGAW
Trigger: CCAGGCGCCCGGACACCAGCACCTCCAAGATCTCGG...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGTGGTGTCCGGGCGCCTaGGGGGTGTGCTGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRWCPGA*GVCWVE
Trigger: CTCCACCCAGCACACCCCCCAGGCGCCCGGACACCA...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCGAGAAGTCACAGCAGTaGGGGGAGGCGCAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGEKSQQ*GEAQRS
Trigger: ACTCCTCTGCGCCTCCCCCCACTGCTGTGACTTCTC...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
3UTR CAA 90 bp ACCACTGAAGCGGCCCTGGCCACTTTCTCCCACTCCTCAGATTCCTaGGCCAGCACCACCGCTTTACCTACACCCCATCCCTGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: TTEAALATFSHSSDS*ASTTALPTPHPWRG
Trigger: GCCTCTCCAGGGATGGGGTGTAGGTAAAGCGGTGGTGCTGGCCAAGGAATCTGAGGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR TCA 90 bp AAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTGGCCACTTTCTCCCACTCCGGCCATTACTCCCCCTaGCTCAGGGCTTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: KAFLSTTTEAALATFSHSGHYSP*LRACSR
Trigger: CCTGCTGCAAGCCCTGAGTCAGGGGGAGTAATGGCC...GGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR GCA 90 bp ATCTCAGCAGTGACCCGGCGCCGCTTGGCAGGAACAGCCAGGCTCTCCTCCTCCGGCCTTGGCACTCTTTaGTGCCATCTTGTTGGACAC +
Preference number: 2 (lower is better)
Translates to: ISAVTRRRLAGTARLSSSGLGTL*CHLVGH
Trigger: GTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCC...GGAGGAGGAGAGCCTGGCTGTTCCTGCCAAGCGGCGCCGGGTCACTGCTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp GGTCTGGAGAGGTCCCTCCAGCCTGGGAGTAGAGGGCGGCTAACAGTCTCAACACGGACAGTCGGGCCTTaGCACGGGGACAGAAAACAG +
Preference number: 2 (lower is better)
Translates to: GLERSLQPGSRGRLTVSTRTVGP*HGDRKQ
Trigger: CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCG...TGTTGAGACTGTTAGCCGCCCTCTACTCCCAGGCTGGAGGGACCTCTCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
3UTR CAA 90 bp CGGCTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTaGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATGGAGA +
Preference number: 2 (lower is better)
Translates to: RLKTPVGLLPVVVSA*VSAPRRSNTDVLWR
Trigger: TCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CAA 90 bp TGGCTGTCCTGGGCCTCGGGCACAAGGGCAGCTGCGCCCAGTCTCTaGATGATGCTGACTTTAGACAAGGACTCCGGCTTCCTCTCAAGC +
Preference number: 2 (lower is better)
Translates to: WLSWASGTRAAAPSL*MMLTLDKDSGFLSS
Trigger: GCTTGAGAGGAAGCCGGAGTCCTTGTCTAAAGTCAGCATCATCAAGAGACTGGGCGCAGCTGCCCTTGTGCCCGAGGCCCAGGACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGGGCGGCCAGGGCAGATaGCCGCAGGCTCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: VETHGLTNGAHHLERCQQGGQGR*PQALLP
Trigger: AGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCC...CTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CAA 90 bp TTCTTCAGGACCCCGGCATACTGCAAGACAGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: FFRTPAYCKTELLLS*SLSQARSSSVSGVA
Trigger: GGCCACCCCAGAAACGGACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGTCCTGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CAA 90 bp AGAGTCCTCTTAATGGTGACCTTGACCTCGGCTGAGGACTTACTCTaGGTGCTGGTGACCTGGCTGTCCTGGGCCTCGGGCACAAGGGCA +
Preference number: 2 (lower is better)
Translates to: RVLLMVTLTSAEDLL*VLVTWLSWASGTRA
Trigger: TGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTCACCATTAAGAGGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp CTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTGGTCCATCTGGGCAAGACCTTTTGCAGCCTaGTGCTGCTCCAGGATCTTG +
Preference number: 2 (lower is better)
Translates to: LRPSLLNTLTVPAWSIWARPFAA*CCSRIL
Trigger: CAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCT...TGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCCGGACAGTCGGGCCTTaGCACGGGGACAGAAAACAG +
Preference number: 2 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCRTVGP*HGDRKQ
Trigger: CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCG...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
3UTR-3UTR TCA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGGGTTCAGGCTGTTGGTaGTCATTCGGGAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRGSGCW*SFGRQL
Trigger: CAGCTGCCTCCCGAATGATCACCAACAGCCTGAACC...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR GCA 90 bp GCCAGAGCGATGATCCTAAATGAAACTCAGCTCAGCACATCCCAGCTCCAAATCCAGCCACCTAGCCCCTaGCCACCCACCTCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: ARAMILNETQLSTSQLQIQPPSP*PPTSAS
Trigger: TGAGGCAGAGGTGGGTGGGCAGGGGCTAGGTGGCTG...GATTTGGAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR CCA 90 bp AATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTGGGCCAGGGCTGCAGTaGCCTTGGCACTCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: NVGEEEAPWHLGEVEKWVGPGLQ*PWHSLL
Trigger: CAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCC...AACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp AATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTAGAGAAGGGGAGTCCTaGAGCAGGCCAGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: NVGEEEAPWHLGEVEKWVREGES*SRPGQL
Trigger: CAGCTGGCCTGGCCTGCTCCAGGACTCCCCTTCTCT...AACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR-3UTR CCA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGCTGGGTGGAGAGTCATaGTTCAGGCTGTTGGTGATC +
Preference number: 2 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRLGGES*FRLLVI
Trigger: GATCACCAACAGCCTGAACCATGACTCTCCACCCAG...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp CCTTCTGCAAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTGGCCACTTTCTCTTGCAGCAGGGACATaGACCATGTGTGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: PSARPSYPQPLKRPWPLSLAAGT*TMCVQE
Trigger: TTCCTGCACACACATGGTCCATGTCCCTGCTGCAAG...AGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTTGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR CCA 90 bp AAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTGGCCACTTTCTCCCACTCCACCAGTGGAAACTCATaGTCTCACAAACGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: KAFLSTTTEAALATFSHSTSGNS*SHKRSP
Trigger: TGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGT...GGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR TCA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAATCTTGTTGGACACAGTaGCCGAGATCTTGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVESCWTQ*PRSWRC
Trigger: GCACCTCCAAGATCTCGGTCACTGTGTCCAACAAGA...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR TCA 90 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGCAGCTGCGCATAGTGTaGAACAGTCCTGCAACTCAC +
Preference number: 2 (lower is better)
Translates to: VETHGLTNGAHHLERCQQQLRIV*NSPATH
Trigger: GTGAGTTGCAGGACTGTTTCACACTATGCGCAGCTG...CTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR GCA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAACTTGGCACTCTTTGCTaGCATCTTGTTGGACACAGT +
Preference number: 2 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVELGTLC*HLVGHS
Trigger: ACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAG...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp AATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTAACACAGACGTCCTATaGAGACCTTTTGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: NVGEEEAPWHLGEVEKWVNTDVL*RPFAAC
Trigger: GCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTGTT...AACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CCA 90 bp GCCAGAGCGATGATCCTAAATGAAACTCAGCTCAGCACATCCCAGCTCCAAATCGGAGAGGTAGAAAAGTaGGTTCTGCCAAGGCCACAG +
Preference number: 2 (lower is better)
Translates to: ARAMILNETQLSTSQLQIGEVEK*VLPRPQ
Trigger: CTGTGGCCTTGGCAGAACCCACTTTTCTACCTCTCC...GATTTGGAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR GCA 72 bp GGGCGGCCAGGGCAGATGCCCGCAGGCTCTGCTGCCTaGACCCCGCCCACAGGTGGGCTAGAAGGTCCTGCG +
Preference number: 3 (lower is better)
Translates to: GRPGQMPAGSAA*TPPTGGLEGPA
Trigger: CGCAGGACCTTCTAGCCCACCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CAA 90 bp AGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGCGGACAGTCGGGCCTaGCCACGGGGACAGAAAACA +
Preference number: 3 (lower is better)
Translates to: RLDATADEGAAGRPEVQEADSRA*PRGQKT
Trigger: TGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGC...CTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
3UTR-3UTR CAA 90 bp GCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCCTTTGGGCATGGTGACCCGGCGCCGCTaGGCAGGAACAGCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: ACCCSRILRVRGVVPLGMVTRRR*AGTARL
Trigger: GAGCCTGGCTGTTCCTGCCAAGCGGCGCCGGGTCAC...CATGCCCAAAGGCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 72 bp AGACAAGGACTCCGGCTTCCTCTCAAGCCCAGACCGTaGGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: RQGLRLPLKPRP*GKRQAPQCRGS
Trigger: GCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGGGCTTGAGAGGAAGCCGGAGTCCTTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CCA 72 bp ACTGCCATGCCCTCGCAGCCATCCTGGCTTCCTGCCTaGACTGCTGCAGTGGCATCCACCCCAGCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: TAMPSQPSWLPA*TAAVASTPALP
Trigger: TGGGAGGGCTGGGGTGGATGCCACTGCAGCAGTCCAGGCAGGAAGCCAGGATGGCTGCGAGGGCATGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR CAA 90 bp AGCCCAGACCGTGAGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGA +
Preference number: 3 (lower is better)
Translates to: SPDREESARRRSVGAAAVELLLS*SLSQAR
Trigger: TCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTC...AACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CCA 72 bp ACCTCGGCTGAGGACTTACTCTTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGCACAAGGGCAGCTGCG +
Preference number: 3 (lower is better)
Translates to: TSAEDLLLVLVT*LSWASGTRAAA
Trigger: CGCAGCTGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGCCGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR CCA 72 bp CGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTaGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: RPSLLNTLTVPA*SIWAPRPSLEL
Trigger: CAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CAA 90 bp TCCCTGTCGTGGTGTCTGCCTTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGACAGTGACCGAGATCTaGGAGGTGCTGGTGTCCGGG +
Preference number: 3 (lower is better)
Translates to: SLSWCLPWSRRRGGQTQTTVTEI*EVLVSG
Trigger: CCCGGACACCAGCACCTCCAAGATCTCGGTCACTGT...CGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 72 bp CACAGGTGGGCTAGAAGGTCCTGCGGCCCAGTCTTTTaGACACGCTCACAGTGCCCGCGTGGTCCATCTGGG +
Preference number: 3 (lower is better)
Translates to: HRWARRSCGPVF*TRSQCPRGPSG
Trigger: CCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAGGACCTTCTAGCCCACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 72 bp AGCTGCGACGACCATCCCAGGCTAGGAGAAATGGGGTaGTCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCC +
Preference number: 3 (lower is better)
Translates to: SCDDHPRLGEMG*SPECSGLALEP
Trigger: GGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR TCA 72 bp CAGCACTCCCGGGTCACTGTGCACATTCCTCCTCCTTaGTCACAACACCCCCAGCCACCTAGCCCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: QHSRVTVHIPPP*SQHPQPPSPCP
Trigger: TGGGCAGGGGCTAGGTGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGCACAGTGACCCGGGAGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 72 bp CTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTaGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCC +
Preference number: 3 (lower is better)
Translates to: LLWVYSLSWCLP*SRRRGGQTQTS
Trigger: GGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CAA 90 bp CCTCAGATTCCTTGGCCAGCACCACCGCTTTACCTACACCCCATCCCTGGAGAGAACCACTACGGCTTATaGGGGGCAGGGGGCGGCCTA +
Preference number: 3 (lower is better)
Translates to: PQIPWPAPPLYLHPIPGENHYGL*GAGGGL
Trigger: TAGGCCGCCCCCTGCCCCCAATAAGCCGTAGTGGTT...CTCTCCAGGGATGGGGTGTAGGTAAAGCGGTGGTGCTGGCCAAGGAATCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR TCA 72 bp CCTCTGCCACCATCCCCAGCCCAGCTGCGCATAGTGTaGAACAGTCCTGCAACTCACCCTGAAGGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: PLPPSPAQLRIV*NSPATHPEGVG
Trigger: CCCCACTCCTTCAGGGTGAGTTGCAGGACTGTTTCACACTATGCGCAGCTGGGCTGGGGATGGTGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR GCA 72 bp CCGGCGGGCCAGGGCTGCAGTGGCCTTGGCACTCTTTaGTGCCATCTTGTTGGACACAGTGACCGAGATCTT +
Preference number: 3 (lower is better)
Translates to: PAGQGCSGLGTL*CHLVGHSDRDL
Trigger: AAGATCTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 72 bp ACAGACGTCCTATGGAGACCTTTTGCAGCCTGCTGCTaGTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCCT +
Preference number: 3 (lower is better)
Translates to: TDVLWRPFAACC*SRILRVRGVVP
Trigger: AGGCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGACGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 72 bp CTTGCCCACCACCCGCCATACACTTTCAGAGACAGATaGCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCA +
Preference number: 3 (lower is better)
Translates to: LAHHPPYTFRDR*PGQENGCASAA
Trigger: TGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
3UTR CCA 72 bp TTGGCCAGCACCACCGCTTTACCTACACCCCATCCCTaGAGAGGCCCTGCTCACTACCTGCTACCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: LASTTALPTPHP*RGPAHYLLPAP
Trigger: AGGAGCTGGTAGCAGGTAGTGAGCAGGGCCTCTCCAGGGATGGGGTGTAGGTAAAGCGGTGGTGCTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR GCA 72 bp GCGGGCCAGGGCTGCAGTGGCCTTGGCACTCTTTGCTaGCATCTTGTTGGACACAGTGACCGAGATCTTGGA +
Preference number: 3 (lower is better)
Translates to: AGQGCSGLGTLC*HLVGHSDRDLG
Trigger: TCCAAGATCTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 72 bp AACACAGACGTCCTATGGAGACCTTTTGCAGCCTGCTaGTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: NTDVLWRPFAAC*CSRILRVRGVV
Trigger: CACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 72 bp GAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTaGCTTGGTCTCGGCGCCGAGGCGGTCAAACACAGA +
Preference number: 3 (lower is better)
Translates to: EDSCGFTPCRGV*LGLGAEAVKHR
Trigger: TCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CAA 90 bp GCTGCTGTCATTGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCTCCTATGGAGACCTTTaGCAGCCTGCTGCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: AAVIVAVPSQILVRFWGGSYGDL*QPAAAP
Trigger: TGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGA...GCCACCCCAGAAACGGACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 72 bp TCACCCCTTCTGCAAGGCCTTCCTATCCACAACCACTaGAGCGGCCCTGGCCACTTTCTCCCACTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: SPLLQGLPIHNH*SGPGHFLPLLR
Trigger: TCTGAGGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTTGCAGAAGGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 72 bp CGCTGTGCAGCAGGGAGGGGTGGGCGACCAAACCAGTaGAAACTCATGGTCTCACAAACGGAGCCCATCATT +
Preference number: 3 (lower is better)
Translates to: RCAAGRGGRPNQ*KLMVSQTEPII
Trigger: AATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTTGGTCGCCCACCCCTCCCTGCTGCACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 72 bp GCAAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTaGCCACTTTCTCCCACTCCTCAGATTCCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: ARPSYPQPLKRP*PLSPTPQIPWP
Trigger: TGGCCAAGGAATCTGAGGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 72 bp TTCCTGTTCCTTGTCCCACCTCAGCACCTCTGCCCCTaGCTGTCCCTCTGTCTGAAAGCTCTCCTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: FLFLVPPQHLCP*LSLCLKALLLN
Trigger: GTTCAGGAGGAGAGCTTTCAGACAGAGGGACAGCCAGGGGCAGAGGTGCTGAGGTGGGACAAGGAACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR-3UTR CAA 90 bp CTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCTCGGCGTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCA +
Preference number: 3 (lower is better)
Translates to: LKTPVGLLPVVVSALVSASWFRL*VIIREA
Trigger: TGCCTCCCGAATGATCACCAACAGCCTGAACCATGA...CGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR-3UTR CAA 90 bp AGGCGGCTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCTGGCCTTGGCACTCTTaGCTGCCATCTTGTTGGACA +
Preference number: 3 (lower is better)
Translates to: RRLKTPVGLLPVVVSALVWPWHS*LPSCWT
Trigger: TGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCA...GACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 72 bp TCTTCAGGACCCCGGCATACTGCAAGACAGAGCTGCTaGTGTCATTGTCGCTGTCCCAAGCCAGATCCTCGT +
Preference number: 3 (lower is better)
Translates to: SSGPRHTARQSC*CHCRCPKPDPR
Trigger: ACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGTCCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR GCA 72 bp GCTTCTTCAGGACCCCGGCATACTGCAAGACAGAGCTaGTGCTGTCATTGTCGCTGTCCCAAGCCAGATCCT +
Preference number: 3 (lower is better)
Translates to: ASSGPRHTARQS*CCHCRCPKPDP
Trigger: AGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGTCCTGAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 72 bp CACCAGAGTCCTCTTAATGGTGACCTTGACCTCGGCTaGGGACTTACTCTTGGTGCTGGTGACCTGGCTGTC +
Preference number: 3 (lower is better)
Translates to: HQSPLNGDLDLG*GLTLGAGDLAV
Trigger: GACAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTCACCATTAAGAGGACTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
3UTR TCA 72 bp CCCAGATGCTCCGGTCTAACATCTAGGCGGGCCCTATaGTTCTCATCTTCTCTAGCCCCAACTTCCAACCCA +
Preference number: 3 (lower is better)
Translates to: PRCSGLTSRRAL*FSSSLAPTSNP
Trigger: TGGGTTGGAAGTTGGGGCTAGAGAAGATGAGAATCATAGGGCCCGCCTAGATGTTAGACCGGAGCATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 72 bp TGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTaGAAAGGTGCCAGCAGGCAGGTGAAATCCATGGGG +
Preference number: 3 (lower is better)
Translates to: WKLMVSQTEPII*KGASRQVKSMG
Trigger: CCCCATGGATTTCACCTGCCTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CCA 72 bp TCTCCTCCTGAACTTCATGAAGCCACATTCCCAACTTaGCCTCCATGTCACCCCTTCTGCAAGGCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: SPPELHEATFPT*PPCHPFCKAFL
Trigger: TAGGAAGGCCTTGCAGAAGGGGTGACATGGAGGCCAAGTTGGGAATGTGGCTTCATGAAGTTCAGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR TCA 72 bp CCTTCTCCTCACAGAAGCCAGAGCGATGATCCTAAATaGAACTCAGCTCAGCACATCCCAGCTCCAAATCCT +
Preference number: 3 (lower is better)
Translates to: PSPHRSQSDDPK*NSAQHIPAPNP
Trigger: AGGATTTGGAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGCTTCTGTGAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp AGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGCCCGCAGGCTCTGCTaGCTGCACCCCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RLDATADEGAAGRPEVQEARRLC*LHPAHR
Trigger: CCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGCGGGC...CTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGGGGCAGGAAAACGGATaGGCCTCAGCCGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSTPPPTRGPLGGRRYRRGQENG*ASAAAQ
Trigger: CTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCC...CCTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGGGGAGGCAGCACTGGTaGCACGGCGAATTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: GSTPPPTRGPLGGRRYRRGRQHW*HGEFRL
Trigger: CAGGCGAAATTCGCCGTGGCACCAGTGCTGCCTCCC...CCTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGCTGGGGACTGGCCTTaGCTGGGCCCCGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: QQARRHRRRGGRWEAGGTAGDWP*LGPVLA
Trigger: AGCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGC...TGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGCCCTGTCGTGGTGTCTaGCTTGGTCTCGGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: NRLDATADEGAAGRPEVQPCRGV*LGLGAE
Trigger: CTCGGCGCCGAGACCAAGGCAGACACCACGACAGGG...CTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGGGAGGCAGCACTGGTaGCACGGCGAATTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: NRLDATADEGAAGRPEVQGRQHW*HGEFRL
Trigger: CAGGCGAAATTCGCCGTGGCACCAGTGCTGCCTCCC...CTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACACCTGACACTGCTCCCTaGAGCCGCCGGAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QQARRHRRRGGRWEAGGTPDTAP*SRRKLN
Trigger: GTTCAGCTTCCGGCGGCTCCAGGGAGCAGTGTCAGG...TGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp CAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGATGCAGCAGGGAGGGGTaGGCGACCAAACCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QARRHRRRGGRWEAGGTGCSREG*ATKPVE
Trigger: TTCCACTGGTTTGGTCGCCCACCCCTCCCTGCTGCA...TCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp AGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGGTTCAGGCTGTTGGTaGTCATTCGGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLDATADEGAAGRPEVQEGSGCW*SFGRQH
Trigger: GTGCTGCCTCCCGAATGATCACCAACAGCCTGAACC...CTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAACGGCGAATTTCGCCTaGAAGGGGGCTAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QQARRHRRRGGRWEAGGTTANFA*KGARAA
Trigger: TGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGT...TGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TCAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACCGGACAGTCGGGCCTTaGCACGGGGACAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: STGSTPPPTRGPLGGRRYRTVGP*HGDRKQ
Trigger: CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCG...GTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp GGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGCCCGCGTGGTCCATCTaGGCACCAAGGCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GSGRTQRTVGPCHGDRKQPAWSI*APRPSL
Trigger: CAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGG...CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp AACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGAGCAGCCGTTGTCGCTaGGCTTGTGGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRLDATADEGAAGRPEVQSSRCR*ACGLGF
Trigger: AAAGCCAAGGCCACAAGCTCAGCGACAACGGCTGCT...CTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AGTGCCCGCGTGGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTGCTCCCCCGACGGCGAATTTCGCCTaGAAGGGGGCTAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SARVVHLGTKALAGAAPPTANFA*KGARAA
Trigger: TGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGT...CGGGGGAGCAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGCGGCCAGGGCAGATaGCCGCAGGCTCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSGGQGR*PQALLP
Trigger: AGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCC...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TCAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACGCCCTGCTCACTACCTaGTACCAGCTCCTAGGACAG +
Preference number: 4 (lower is better)
Translates to: STGSTPPPTRGPLGGRRYALLTT*YQLLGQ
Trigger: CTGTCCTAGGAGCTGGTAGCAGGTAGTGAGCAGGGC...GTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp GGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGCTGCCCACCCACCTCTaGCTCATGCTGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSGRTQRTVGPCHGDRKQLPTHL*LMLEAG
Trigger: CCCTGCCTCCAGCATGAGGCAGAGGTGGGTGGGCAG...CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp CTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCCACCAAGGCCCTCGCTaGAGCTGCTCCCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSETDAQGRKTDAPQPQPHQGPR*SCSPGA
Trigger: GGCCCCGGGGGAGCAGCTCCAGCGAGGGCCTTGGTG...GGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CCAGACCGTGAGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGTCAGAGAAGGGGAGTCCTaGAGCAGGCCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PDREESARRRSVGAAAVVREGES*SRPGQL
Trigger: CAGCTGGCCTGGCCTGCTCCAGGACTCCCCTTCTCT...GACAACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp GGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGACTCCTCAGATTCCTTaGCCAGCACCACCGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GSTPPPTRGPLGGRRYRRTPQIP*PAPPLY
Trigger: GTAAAGCGGTGGTGCTGGCCAAGGAATCTGAGGAGT...CCTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGTGGCCCCCAGGCGGCTaGAGACTCCTGTGGGTTTAC +
Preference number: 4 (lower is better)
Translates to: GSGRTQRTVGPCHGDRKQWPPGG*RLLWVY
Trigger: GTAAACCCACAGGAGTCTTCAGCCGCCTGGGGGCCA...CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp GCCCAGACCGTGAGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGAGCAGCCGTTGTCGCTaGGCTTGTGGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: AQTVRKAPGAAVSGQQPLSSRCR*ACGLGF
Trigger: AAAGCCAAGGCCACAAGCTCAGCGACAACGGCTGCT...CAACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp TCCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGCCCGCAGGCTCTGCTaGCTGCACCCCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SQCPLPTTRHTLSETDAQARRLC*LHPAHR
Trigger: CCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGCGGGC...CTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp TTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGTGGTGTCCGGGCGCCTaGGGGGTGTGCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FRDRCPGQENGCASAAAQWCPGA*GVCWVE
Trigger: CTCCACCCAGCACACCCCCCAGGCGCCCGGACACCA...CTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp ACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGTCGTGGTGTCTGCCTTaGTCTCGGCGCCGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: TDAQGRKTDAPQPQPRVWSWCLP*SRRRGG
Trigger: ACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGA...CCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCGTGCTGGCTGGGGACTaGCCTTGGCTGGGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGVLAGD*PWLGPV
Trigger: GACGGGGCCCAGCCAAGGCCAGTCCCCAGCCAGCAC...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp ACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGGTGACCTGGCTGTCCTaGGCCTCGGGCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TDAQGRKTDAPQPQPRVWVTWLS*ASGTRA
Trigger: TGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCAC...CCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp GCTGCTGTCATTGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCCACCAAGGCCCTCGCTaGAGCTGCTCCCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: AAVIVAVPSQILVRFWGGHQGPR*SCSPGA
Trigger: GGCCCCGGGGGAGCAGCTCCAGCGAGGGCCTTGGTG...GCCACCCCAGAAACGGACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp TTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCACACCAAGGCCCTCGCTaGAGCTGCTCCCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: FQRQMPRAGKRMRLSRSPHQGPR*SCSPGA
Trigger: GGCCCCGGGGGAGCAGCTCCAGCGAGGGCCTTGGTG...TGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCTCGGCGCCGAGGCCACCCCGCCCACAGGTaGGCTAGAAGGTCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LLWVYSLSWCLPWSRRRGHPAHR*ARRSCG
Trigger: GCCGCAGGACCTTCTAGCCCACCTGTGGGCGGGGTG...GCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGACCTCCATCTCAGCAGTaGCCCGGCGCCGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRPPSQQ*PGAAWQ
Trigger: CTGCCAAGCGGCGCCGGGTCACTGCTGAGATGGAGG...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCCTCAAGCCCAGACCGTaGGGAAAGCGCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LSETDAQGRKTDAPQPQPLKPRP*GKRQAP
Trigger: CGGCGCCTGGCGCTTTCCTCACGGTCTGGGCTTGAG...GGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR TCA 90 bp GAGGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACCTAGGAGAAATGGGGTaGTCCCCCGAATGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EGRAGRSGQSGLATGTENLGEMG*SPECSG
Trigger: GCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAG...GTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp TCAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAAAGCACAGAGGACATaGGAGAAGGGGAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: STGSTPPPTRGPLGGRRYKAQRT*EKGSPG
Trigger: TCCAGGACTCCCCTTCTCTCATGTCCTCTGTGCTTT...GTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GTGCCCGCGTGGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTGCTCCCCCGGACTCAGTGGCAGCTTTaGACATGTCCTGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: VPAWSIWAPRPSLELLPRTQWQL*TCPDGA
Trigger: TGCACCGTCAGGACATGTGCAAAGCTGCCACTGAGT...CCGGGGGAGCAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp GGCAGCACTGGTGCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGACGGCGAATTTCGCCTaGAAGGGGGCTAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSTGATANFACKGARAAGTANFA*KGARAA
Trigger: TGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGT...CCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGCACCAGTGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR GCA 90 bp TGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCTGCAGGCTCTGCTGCCTaGACCCCGCCCACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSGLALEPEGDKLCHPGAAGSAA*TPPTGG
Trigger: CCCACCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGC...AGCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGGCAGGAAAACGGATaGGCCTCAGCCGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSGQENG*ASAAAQ
Trigger: CTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCC...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp TTGATGACGTACTTCCCCTCCATCTCAGCAGTGACCCGGCGCCGCTTGGCAGGATGGTGTCCGGGCGCCTaGGGGGTGTGCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LMTYFPSISAVTRRRLAGWCPGA*GVCWVE
Trigger: CTCCACCCAGCACACCCCCCAGGCGCCCGGACACCA...TCCTGCCAAGCGGCGCCGGGTCACTGCTGAGATGGAGGGGAAGTACGTCATCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp TCCCTGTCGTGGTGTCTGCCTTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCGTGGTGTCTGCCTTaGTCTCGGCGCCGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SLSWCLPWSRRRGGQTQTSWCLP*SRRRGG
Trigger: ACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGA...CGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp TTTGAACACGCTCACAGTGCCCGCGTGGTCCATCTGGGCACCAAGGCCCTCGCTGCTGGGGACTGGCCTTaGCTGGGCCCCGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: FEHAHSARVVHLGTKALAAGDWP*LGPVLA
Trigger: AGCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGC...AGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp AACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGGAGAGGTAGAAAAGTaGGTTCTGCCAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: NRLDATADEGAAGRPEVQGEVEK*VLPRPQ
Trigger: CTGTGGCCTTGGCAGAACCCACTTTTCTACCTCTCC...CTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGCCTGACACTGCTCCCTaGAGCCTGGCCCACCGGGCC +
Preference number: 4 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRPDTAP*SLAHRA
Trigger: GGCCCGGTGGGCCAGGCTCCAGGGAGCAGTGTCAGG...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392035.6
CDS-3UTR TCA 90 bp TCCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGCTCAAGCCCAGACCGTaGGGAAAGCGCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SQCPLPTTRHTLSETDAQLKPRP*GKRQAP
Trigger: CGGCGCCTGGCGCTTTCCTCACGGTCTGGGCTTGAG...CTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR TCA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCGGAGCCGCCGGAAGCTaGACTGACTCGTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: HPPYTFRDRCPGQENGCAGAAGS*TDSSAA
Trigger: GGCCGCGGACGAGTCAGTTCAGCTTCCGGCGGCTCC...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGCCGAGATCTTGGAGGTaGTGGTGTCCGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSAPCPPPAIHFQRQMPRPRSWR*WCPGAW
Trigger: CCAGGCGCCCGGACACCAGCACCTCCAAGATCTCGG...CCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAACCGGCGGGCCAGGGCTaGAGTGGCCTTGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQPAGQG*SGLGTL
Trigger: AAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCGG...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATGGAGACCTTTTGCAGCCCGCAGGCTCTGCTaGCTGCACCCCGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LVSAPRRSNTDVLWRPFAARRLC*LHPAHR
Trigger: CCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGCGGGC...TGCAAAAGGTCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp CTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCTCGGCGGGCGGCCAGGGCAGATaGCCGCAGGCTCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LKTPVGLLPVVVSALVSAGGQGR*PQALLP
Trigger: AGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCC...CGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp GCACTGGTGCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGTACTGGGAGGCAGCACTGGTaGCACGGCGAATTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: ALVPRRISPARGLGLQGTGRQHW*HGEFRL
Trigger: CAGGCGAAATTCGCCGTGGCACCAGTGCTGCCTCCC...AGTACCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGCACCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR GCA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTCTTCCCAGTGCCCCTTaGCCACCACCCGCCATACAC +
Preference number: 4 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSLPSAP*PPPAIH
Trigger: GTGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAG...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp GGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCTGGTGTCCGGGCGCCTaGGGGGTGTGCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GCAGWRVMVQAVGDHSGGWCPGA*GVCWVE
Trigger: CTCCACCCAGCACACCCCCCAGGCGCCCGGACACCA...GCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357884.8
ENST00000580977.1
CDS-3UTR CCA 90 bp GACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCGGGCCAGGGCTGCAGTaGCCTTGGCACTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DLLQPAAAPGSCGCGVWCGPGLQ*PWHSLL
Trigger: CAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCC...GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp GGTCTGGAGAGGTCCCTCCAGCCTGGGAGTAGAGGGCGGCTAACAGTCTCAACAGCTGGGGACTGGCCTTaGCTGGGCCCCGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GLERSLQPGSRGRLTVSTAGDWP*LGPVLA
Trigger: AGCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGC...TGTTGAGACTGTTAGCCGCCCTCTACTCCCAGGCTGGAGGGACCTCTCCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp ACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGGTGCTGGCTGGGGACTaGCCTTGGCTGGGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: TLSETDAQGRKTDAPQPQVLAGD*PWLGPV
Trigger: GACGGGGCCCAGCCAAGGCCAGTCCCCAGCCAGCAC...CTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCGTGCTGGCTGGGGACTaGCCTTGGCTGGGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: HPPYTFRDRCPGQENGCAVLAGD*PWLGPV
Trigger: GACGGGGCCCAGCCAAGGCCAGTCCCCAGCCAGCAC...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp CCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGTTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PVPLAHHPPYTFRDRCPGLVLVT*LSWASG
Trigger: GCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAA...CCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAACCCGCGTGGTCCATCTaGGCACCAAGGCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQPAWSI*APRPSL
Trigger: CAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGG...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp TCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGCTCACAGTGCCCGCGTaGTCCATCTGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SETDAQGRKTDAPQPQPRLTVPA*SIWAPR
Trigger: CCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAG...CCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAACACCCCGCCCACAGGTaGGCTAGAAGGTCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQHPAHR*ARRSCG
Trigger: GCCGCAGGACCTTCTAGCCCACCTGTGGGCGGGGTG...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp GAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCCTTCACTCTAGGCACTaGCCTCCCTTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ETDAQGRKTDAPQPQPRVLHSRH*PPFPVP
Trigger: GGGCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAG...GACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp GCACTGGTGCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGTACTCCTGACACTGCTCCCTaGAGCCGCCGGAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ALVPRRISPARGLGLQGTPDTAP*SRRKLN
Trigger: GTTCAGCTTCCGGCGGCTCCAGGGAGCAGTGTCAGG...AGTACCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGCACCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CCA 90 bp CGACGACCATCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTCCTGGACTGCTGCAGTaGCATCCACCCCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRPSQARRNGVIPRMLGPPGLLQ*HPPQPS
Trigger: GGAGGGCTGGGGTGGATGCCACTGCAGCAGTCCAGG...AGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGACCTCCATCTCAGCAGTaGCCCGGCGCCGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRPPSQQ*PGAAWQ
Trigger: CTGCCAAGCGGCGCCGGGTCACTGCTGAGATGGAGG...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp ACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCTCAAGCCCAGACCGTaGGGAAAGCGCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: TLSETDAQGRKTDAPQPQLKPRP*GKRQAP
Trigger: CGGCGCCTGGCGCTTTCCTCACGGTCTGGGCTTGAG...CTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR TCA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTTGCGGCCCAGTCTTTTaGACACGCTCACAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSCGPVF*TRSQCP
Trigger: CGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCA...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp GGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCCGCCGGAAGCTGAACTaGCTCGTCCGCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GCAGWRVMVQAVGDHSGGRRKLN*LVRGRS
Trigger: AGAGCGGCCGCGGACGAGTCAGTTCAGCTTCCGGCG...GCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR TCA 90 bp ACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCGCCGGAAGCTGAACTaGCTCGTCCGCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TLSETDAQGRKTDAPQPQRRKLN*LVRGRS
Trigger: AGAGCGGCCGCGGACGAGTCAGTTCAGCTTCCGGCG...CTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCACTGGTGGAGCCGCCGGAAGCTaGACTGACTCGTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GWRVMVQAVGDHSGGSTGGAAGS*TDSSAA
Trigger: GGCCGCGGACGAGTCAGTTCAGCTTCCGGCGGCTCC...ACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR TCA 90 bp TCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGAACTCCTGACCTTGTaGTCCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SETDAQGRKTDAPQPQPRELLTL*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACAAGGTCAGGAGTTC...CCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGGCTGCTCCAGGATCTTaGGGGTGCGGGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRAAPGS*GCGVWC
Trigger: GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGC...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGCTGCTCCAGGATCTTaGGGGTGCGGGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SAPCPPPAIHFQRQMPRAAAPGS*GCGVWC
Trigger: GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGC...TGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp ATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCCCCTGTCGTGGTGTCTaGCTTGGTCTCGGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: MLGPSSRARGRQAVSSRSPCRGV*LGLGAE
Trigger: CTCGGCGCCGAGACCAAGGCAGACACCACGACAGGG...GCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp ACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGGGGCACAAGGGCAGCTaGGCCCAGTCTCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: TDAQGRKTDAPQPQPRVWGHKGS*AQSLDD
Trigger: ATCATCAAGAGACTGGGCGCAGCTGCCCTTGTGCCC...CCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp TTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGCAGGCTCTGCTGCCTaGACCCCGCCCACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPTTRHTLSETDAQGRKTAGSAA*TPPTGG
Trigger: CCCACCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGC...CGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGCGGCCAGGGCAGATaGCCGCAGGCTCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LAHHPPYTFRDRCPGQENGGQGR*PQALLP
Trigger: AGGCAGCAGAGCCTGCGGGCATCTGCCCTGGCCGCC...GTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGGCCTCCCTTCCCAGTaGCCCTTGCCCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: LPTTRHTLSETDAQGRKTGLPSQ*PLPTTR
Trigger: GCGGGTGGTGGGCAAGGGGCACTGGGAAGGGAGGCC...CGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGGCCTCCCTTCCCAGTaGCCCTTGCCCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCGLPSQ*PLPTTR
Trigger: GCGGGTGGTGGGCAAGGGGCACTGGGAAGGGAGGCC...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp AGTGCCCGCGTGGTCCATCTGGGCACCAAGGCCCTCGCTGGAGCTGCTCCCCCGGCTTCCTTAAAGAACTaGATCCACTCGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SARVVHLGTKALAGAAPPASLKN*IHSEVA
Trigger: GGCCACTTCCGAGTGGATCCAGTTCTTTAAGGAAGC...CGGGGGAGCAGCTCCAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp TTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCATCGTGGTGTCTGCCTTaGTCTCGGCGCCGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: FQRQMPRAGKRMRLSRSPSWCLP*SRRRGG
Trigger: ACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGA...TGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp AGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCATTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SAPCPPPAIHFQRQMPRALVLVT*LSWASG
Trigger: GCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAA...TGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGACTCACAGTGCCCGCGTaGTCCATCTGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRLTVPA*SIWAPR
Trigger: CCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAG...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCACCCCGCCCACAGGTaGGCTAGAAGGTCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PPAIHFQRQMPRAGKRMRHPAHR*ARRSCG
Trigger: GCCGCAGGACCTTCTAGCCCACCTGTGGGCGGGGTG...GCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGAAGAGAAGGGGAGTCCTaGAGCAGGCCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRREGES*SRPGQL
Trigger: CAGCTGGCCTGGCCTGCTCCAGGACTCCCCTTCTCT...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CTGTGCACATTCCTCCTCCTTGATCACAACACCCCCAGCCACCTAGCCCCTGCCCTCCTAGGACAGGCCTaGCTCAGGGGCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LCTFLLLDHNTPSHLAPALLGQA*LRGAVQ
Trigger: CTGCACAGCGCCCCTGAGCCAGGCCTGTCCTAGGAG...GGCAGGGGCTAGGTGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCAGGGCTGCAGGGTACTaGCTCAGTGGCAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: DLLQPAAAPGSCGCGVWCRAAGY*LSGSFA
Trigger: TGCAAAGCTGCCACTGAGTCAGTACCCTGCAGCCCT...GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp CTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACCCTCCATCTCAGCAGTaGCCCGGCGCCGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LAHHPPYTFRDRCPGQENPPSQQ*PGAAWQ
Trigger: CTGCCAAGCGGCGCCGGGTCACTGCTGAGATGGAGG...GTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGTGGCCCCCAGGCGGCTaGAGACTCCTGTGGGTTTAC +
Preference number: 4 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRWPPGG*RLLWVY
Trigger: GTAAACCCACAGGAGTCTTCAGCCGCCTGGGGGCCA...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CTGTCCCAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCCCCCAGGCGGCTGAAGGACCTTGACCTCGGCTaGGGACTTACTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSQARSSSVSGVAPRRLKDLDLG*GLTLGA
Trigger: AGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTC...CTTCAGCCGCCTGGGGGCCACCCCAGAAACGGACGAGGATCTGGCTTGGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp TCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGAGGGGGCGGCCTAACTaGATGGTGACTGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: SETDAQGRKTDAPQPQPRRGRPN*MVTVAI
Trigger: AATGGCCACAGTCACCATTCAGTTAGGCCGCCCCCT...CCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp TTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATGGAGACCTTTTGCACCGGGAGGCGGAGGTTaGACTGAGCCAAGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: LVSAPRRSNTDVLWRPFAPGGGG*TEPRSR
Trigger: GCGCGACCTTGGCTCAGTGCAACCTCCGCCTCCCGG...TGCAAAAGGTCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp AGCAGTGACCCGGCGCCGCTTGGCAGGAACAGCCAGGCTCTCCTCCTCCCGGCGCTTGGCACTCTTTGCTaGCATCTTGTTGGACACAGT +
Preference number: 4 (lower is better)
Translates to: SSDPAPLGRNSQALLLPALGTLC*HLVGHS
Trigger: ACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAG...CGCCGGGAGGAGGAGAGCCTGGCTGTTCCTGCCAAGCGGCGCCGGGTCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGCCGGCGGGCCAGGGCTaGAGTGGCCTTGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRPAGQG*SGLGTL
Trigger: AAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCGG...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp ACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCCGGCGGGCCAGGGCTaGAGTGGCCTTGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: TRHTLSETDAQGRKTDAPPAGQG*SGLGTL
Trigger: AAGAGTGCCAAGGCCACTGCAGCCCTGGCCCGCCGG...AGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGACCCTGTCGTGGTGTCTaGCTTGGTCTCGGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRPCRGV*LGLGAE
Trigger: CTCGGCGCCGAGACCAAGGCAGACACCACGACAGGG...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCGGCTTTGACAGTCAGTaGTGGCTGGGGACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DLLQPAAAPGSCGCGVWCGFDSQ*WLGTGL
Trigger: AAGGCCAGTCCCCAGCCAGCACTGACTGTCAAAGCC...GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp AAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTGGCCACTTTCTCCCACTCCCAGCCACCTAGCCCCTaGCCACCCACCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KAFLSTTTEAALATFSHSQPPSP*PPTSAS
Trigger: TGAGGCAGAGGTGGGTGGGCAGGGGCTAGGTGGCTG...GGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp AGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGCCATCCTGGCTTCCTaGCTGGACTGCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SAPCPPPAIHFQRQMPRAAILAS*LDCCSG
Trigger: GCCACTGCAGCAGTCCAGGCAGGAAGCCAGGATGGC...TGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp TGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGAGATCTTGGAGGTGCTaGTGTCCGGGCGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CPPPAIHFQRQMPRAGKRRSWRC*CPGAWG
Trigger: CCCCCAGGCGCCCGGACACCAGCACCTCCAAGATCT...CCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp ACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGAGATCTTGGAGGTGCTaGTGTCCGGGCGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLSETDAQGRKTDAPQPQRSWRC*CPGAWG
Trigger: CCCCCAGGCGCCCGGACACCAGCACCTCCAAGATCT...CTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp GGTCTGGAGAGGTCCCTCCAGCCTGGGAGTAGAGGGCGGCTAACAGTCTCAACAGGGCCAGGGCTGCAGTaGCCTTGGCACTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLERSLQPGSRGRLTVSTGPGLQ*PWHSLL
Trigger: CAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCC...TGTTGAGACTGTTAGCCGCCCTCTACTCCCAGGCTGGAGGGACCTCTCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGGCTGGGGACTGGCCTTaGCTGGGCCCCGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RHTLSETDAQGRKTDAPQAGDWP*LGPVLA
Trigger: AGCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGC...CTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp TACTGCAAGACAGAGCTGCTGCTGTCATTGTCGCTGTCCCAAGCCAGATCCTCGGTGCTGGCTGGGGACTaGCCTTGGCTGGGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: YCKTELLLSLSLSQARSSVLAGD*PWLGPV
Trigger: GACGGGGCCCAGCCAAGGCCAGTCCCCAGCCAGCAC...CGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp AGGCGGCTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCTTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RRLKTPVGLLPVVVSALVLVLVT*LSWASG
Trigger: GCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAA...GACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAGCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGGGGAGAGGGGGCCCTaGAGAGAAGGCCACAGACTC +
Preference number: 4 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRGERGP*REGHRL
Trigger: GAGTCTGTGGCCTTCTCTCCAGGGCCCCCTCTCCCC...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000392035.6
CDS-3UTR CCA 90 bp CTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCGAGAAGTCACAGCAGTaGGGGGAGGCGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSETDAQGRKTDAPQPQPEKSQQ*GEAQRS
Trigger: ACTCCTCTGCGCCTCCCCCCACTGCTGTGACTTCTC...GGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCCCTACACCCCATCCCTaGAGAGGCCCTGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGPTPHP*RGPAHY
Trigger: GTAGTGAGCAGGGCCTCTCCAGGGATGGGGTGTAGG...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CAA 72 bp GGGGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCAGCACTGGTGCCACGG +
Preference number: 4 (lower is better)
Translates to: GGVLGGESWFRL*VIIREAALVPR
Trigger: CCGTGGCACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580977.1
3UTR CAA 72 bp GCGGCCCTGGCCACTTTCTCCCACTCCTCAGATTCCTaGGCCAGCACCACCGCTTTACCTACACCCCATCCC +
Preference number: 4 (lower is better)
Translates to: AALATFSHSSDS*ASTTALPTPHP
Trigger: GGGATGGGGTGTAGGTAAAGCGGTGGTGCTGGCCAAGGAATCTGAGGAGTGGGAGAAAGTGGCCAGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAACTAGGAGAAATGGGGTaGTCCCCCGAATGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQLGEMG*SPECSG
Trigger: GCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAG...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGCTAGGAGAAATGGGGTaGTCCCCCGAATGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRLGEMG*SPECSG
Trigger: GCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAG...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp ACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGAAAGCACAGAGGACATaGGAGAAGGGGAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TDAQGRKTDAPQPQPRVWKAQRT*EKGSPG
Trigger: TCCAGGACTCCCCTTCTCTCATGTCCTCTGTGCTTT...CCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCGGCCATTACTCCCCCTaGCTCAGGGCTTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HPPYTFRDRCPGQENGCAGHYSP*LRACSR
Trigger: CCTGCTGCAAGCCCTGAGTCAGGGGGAGTAATGGCC...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGGCCCAGGTGTCCGCCTaGGCCCCAGCGGGGACCCTA +
Preference number: 4 (lower is better)
Translates to: VETHGLTNGAHHLERCQQAQVSA*APAGTL
Trigger: TAGGGTCCCCGCTGGGGCTCAGGCGGACACCTGGGC...CTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp TTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATGGAGACCTTTTGCACCGAGATCTTGGAGGTaGTGGTGTCCGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVSAPRRSNTDVLWRPFAPRSWR*WCPGAW
Trigger: CCAGGCGCCCGGACACCAGCACCTCCAAGATCTCGG...TGCAAAAGGTCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp CCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCCCGAGATCTTGGAGGTaGTGGTGTCCGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PYTFRDRCPGQENGCASAPRSWR*WCPGAW
Trigger: CCAGGCGCCCGGACACCAGCACCTCCAAGATCTCGG...GGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCTGCTCCAGGATCTTaGGGGTGCGGGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCAAPGS*GCGVWC
Trigger: GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGC...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGACCTTTTGCAGCCTGCTaGTGCTCCAGGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRPFAAC*CSRILR
Trigger: CCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGG...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GAGGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACACTGCAAGACAGAGCTaGTGCTGTCATTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: EGRAGRSGQSGLATGTENTARQS*CCHCRC
Trigger: ACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGT...GTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CGACGACCATCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTGGGCACAAGGGCAGCTaGGCCCAGTCTCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: RRPSQARRNGVIPRMLGPGHKGS*AQSLDD
Trigger: ATCATCAAGAGACTGGGCGCAGCTGCCCTTGTGCCC...AGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGGGGCAGGAAAACGGATaGGCCTCAGCCGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RHTLSETDAQGRKTDAPQGQENG*ASAAAQ
Trigger: CTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCC...CTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp CCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTTCCCAGTGCCCCTTaGCCACCACCCGCCATACAC +
Preference number: 4 (lower is better)
Translates to: PPAIHFQRQMPRAGKRMRLPSAP*PPPAIH
Trigger: GTGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAG...GCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp GCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCTGCTCCCCACTGCCATaGCCTCGCAGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: AIHFQRQMPRAGKRMRLSCSPLP*PRSHPG
Trigger: GCCAGGATGGCTGCGAGGGCATGGCAGTGGGGAGCA...GCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp GGGGTGGGCGACCAAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCAAGCGGCCCTCTTCCCTaGTCCCCACTGCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GVGDQTSGNSWSHKRSPSSGPLP*SPLPCP
Trigger: AGGGCATGGCAGTGGGGAGCAGGGAAGAGGGCCGCT...TGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTTGGTCGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp TTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATGGAGACCTTTTGCAAGATCTTGGAGGTGCTaGTGTCCGGGCGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVSAPRRSNTDVLWRPFARSWRC*CPGAWG
Trigger: CCCCCAGGCGCCCGGACACCAGCACCTCCAAGATCT...TGCAAAAGGTCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp CACAGACGTCCTATGGAGACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGTGACCTGGCTGTCCTaGGCCTCGGGCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: HRRPMETFCSLLLLQDLAVTWLS*ASGTRA
Trigger: TGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCAC...CGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGTGACCTGGCTGTCCTaGGCCTCGGGCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCVTWLS*ASGTRA
Trigger: TGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCAC...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGTTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRLVLVT*LSWASG
Trigger: GCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAA...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp TGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGAGAGAAGGGGAGTCCTaGAGCAGGCCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPPPAIHFQRQMPRAGKRREGES*SRPGQL
Trigger: CAGCTGGCCTGGCCTGCTCCAGGACTCCCCTTCTCT...CCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CTGTGCACATTCCTCCTCCTTGATCACAACACCCCCAGCCACCTAGCCCCTGCCTTCGGGAGGCAGCACTaGTGCCACGGCGAATTTCGC +
Preference number: 4 (lower is better)
Translates to: LCTFLLLDHNTPSHLAPAFGRQH*CHGEFR
Trigger: GCGAAATTCGCCGTGGCACCAGTGCTGCCTCCCGAA...GGCAGGGGCTAGGTGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CAA 72 bp ACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTaGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTC +
Preference number: 4 (lower is better)
Translates to: TPVGLLPVVVSA*VSAPRRSNTDV
Trigger: GACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp TGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCTGGTTCAGGCTGTTGGTaGTCATTCGGGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CSGLALEPEGDKLCHPGAGSGCW*SFGRQL
Trigger: CAGCTGCCTCCCGAATGATCACCAACAGCCTGAACC...AGCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp TGGGGGAAGGGAGGCCCACCAGGTGACACCCACTTAGTTGAGGGGGACAGGGAGTCTTGTTGGACACAGTaGCCGAGATCTTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: WGKGGPPGDTHLVEGDRESCWTQ*PRSWRC
Trigger: GCACCTCCAAGATCTCGGTCACTGTGTCCAACAAGA...CTCCCTGTCCCCCTCAACTAAGTGGGTGTCACCTGGTGGGCCTCCCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCTGGCCCCCAGGCGGCTaGAGACTCCTGTGGGTTTAC +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCWPPGG*RLLWVY
Trigger: GTAAACCCACAGGAGTCTTCAGCCGCCTGGGGGCCA...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp TTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAAGCAGCCGTTGTCGCTaGGCTTGTGGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FQRQMPRAGKRMRLSRSPSSRCR*ACGLGF
Trigger: AAAGCCAAGGCCACAAGCTCAGCGACAACGGCTGCT...TGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR TCA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAACTCAAGCCCAGACCGTaGGGAAAGCGCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVELKPRP*GKRQAP
Trigger: CGGCGCCTGGCGCTTTCCTCACGGTCTGGGCTTGAG...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CGACGACCATCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTGACCTTGACCTCGGCTaGGGACTTACTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RRPSQARRNGVIPRMLGPDLDLG*GLTLGA
Trigger: AGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTC...AGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp CCTTCTGCAAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTGGCCACTTTCTCAGCTCCCTCTTCCTTaGCCTTCCTCCCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PSARPSYPQPLKRPWPLSQLPLP*PSSRLP
Trigger: GGGGAGACGGGAGGAAGGTCAAGGAAGAGGGAGCTG...AGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTTGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGCCTTTTGCAGCCTGCTaGTGCTCCAGGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRPFAAC*CSRILR
Trigger: CCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGG...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp ATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCCCTTTTGCAGCCTGCTaGTGCTCCAGGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: MLGPSSRARGRQAVSSRSPFAAC*CSRILR
Trigger: CCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGG...GCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GGTCTGGAGAGGTCCCTCCAGCCTGGGAGTAGAGGGCGGCTAACAGTCTCAACAGGCTTTGACAGTCAGTaGTGGCTGGGGACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GLERSLQPGSRGRLTVSTGFDSQ*WLGTGL
Trigger: AAGGCCAGTCCCCAGCCAGCACTGACTGTCAAAGCC...TGTTGAGACTGTTAGCCGCCCTCTACTCCCAGGCTGGAGGGACCTCTCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCTGGGCACAAGGGCAGCTaGGCCCAGTCTCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: CSGLALEPEGDKLCHPGAGHKGS*AQSLDD
Trigger: ATCATCAAGAGACTGGGCGCAGCTGCCCTTGTGCCC...AGCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp ACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCTTCCCAGTGCCCCTTaGCCACCACCCGCCATACAC +
Preference number: 4 (lower is better)
Translates to: TRHTLSETDAQGRKTDAPLPSAP*PPPAIH
Trigger: GTGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAG...AGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGGGCCTCCCTTCCCAGTaGCCCTTGCCCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: VETHGLTNGAHHLERCQQGLPSQ*PLPTTR
Trigger: GCGGGTGGTGGGCAAGGGGCACTGGGAAGGGAGGCC...CTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAACGCCACCAGCGAGAGTaGGGCCATAACCATCACGTG +
Preference number: 4 (lower is better)
Translates to: PLPTTRHTLSETDAQGRKRHQRE*GHNHHV
Trigger: CACGTGATGGTTATGGCCGCACTCTCGCTGGTGGCG...TTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp GCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCACAGCCCAATCCTCTaGCACCATCCCCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AIHFQRQMPRAGKRMRLSHSPIL*HHPQPS
Trigger: GCTGGGCTGGGGATGGTGGCAGAGGATTGGGCTGTG...GCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCTCCTGCCTGGACTGCTaGAGTGGCATCCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCSCLDC*SGIHPS
Trigger: GCTGGGGTGGATGCCACTGCAGCAGTCCAGGCAGGA...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGTTGCCTAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSAPCPPPAIHFQRQMPRLPRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTAGGCAA...CCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp TTGATGACGTACTTCCCCTCCATCTCAGCAGTGACCCGGCGCCGCTTGGCAGGAGGGAGACTCCATCACTaGTGCCACGGCGAATTTCGC +
Preference number: 4 (lower is better)
Translates to: LMTYFPSISAVTRRRLAGGRLHH*CHGEFR
Trigger: GCGAAATTCGCCGTGGCACCAGTGATGGAGTCTCCC...TCCTGCCAAGCGGCGCCGGGTCACTGCTGAGATGGAGGGGAAGTACGTCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp GACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCCTGGGTGGAGAGTCATaGTTCAGGCTGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: DLLQPAAAPGSCGCGVWCLGGES*FRLLVI
Trigger: GATCACCAACAGCCTGAACCATGACTCTCCACCCAG...GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CCA 90 bp AATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTTGGTGTCCGGGCGCCTaGGGGGTGTGCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NVGEEEAPWHLGEVEKWVWCPGA*GVCWVE
Trigger: CTCCACCCAGCACACCCCCCAGGCGCCCGGACACCA...AACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGGGGCCAGGGCTGCAGTaGCCTTGGCACTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RHTLSETDAQGRKTDAPQGPGLQ*PWHSLL
Trigger: CAGCAAAGAGTGCCAAGGCCACTGCAGCCCTGGCCC...CTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CGACGACCATCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTGTTTACTCCCTGTCGTaGTGTCTGCCTTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: RRPSQARRNGVIPRMLGPVYSLS*CLPWSR
Trigger: CCGAGACCAAGGCAGACACCACGACAGGGAGTAAAC...AGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGAGTTTACTCCCTGTCGTaGTGTCTGCCTTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRVYSLS*CLPWSR
Trigger: CCGAGACCAAGGCAGACACCACGACAGGGAGTAAAC...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTTCACTCTAGGCACTaGCCTCCCTTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPAIHFQRQMPRAGKRMRLHSRH*PPFPVP
Trigger: GGGCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAG...GCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp CCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCCTTCACTCTAGGCACTaGCCTCCCTTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PAIHFQRQMPRAGKRMRLLHSRH*PPFPVP
Trigger: GGGCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAG...GAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CCA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGACCACTGAAGCGGCCCTaGCCACTTTCTCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRPLKRP*PLSPTP
Trigger: AGGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGG...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp CTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACACCTCTGCCTCATGCTaGAGGCAGGGCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: LAHHPPYTFRDRCPGQENTSASC*RQGPPS
Trigger: TGAGGGTGGGCCCTGCCTCCAGCATGAGGCAGAGGT...GTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp CCAGACCGTGAGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGTCTCATTATCTCCTTATTaGGATCCAGCAGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: PDREESARRRSVGAAAVVSLSPY*DPAACS
Trigger: AGAGCATGCTGCTGGATCTCAATAAGGAGATAATGA...GACAACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp CTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTGGTCCATCTGGGCATCTTGTTGGACACAGTaGCCGAGATCTTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRPSLLNTLTVPAWSIWASCWTQ*PRSWRC
Trigger: GCACCTCCAAGATCTCGGTCACTGTGTCCAACAAGA...TGCCCAGATGGACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp CCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAAGCAGCCGTTGTCGCTaGGCTTGTGGCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PLPTTRHTLSETDAQGRKSSRCR*ACGLGF
Trigger: AAAGCCAAGGCCACAAGCTCAGCGACAACGGCTGCT...TTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR TCA 90 bp CACAGACGTCCTATGGAGACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGTGCGGCCCAGTCTTTTaGACACGCTCACAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HRRPMETFCSLLLLQDLACGPVF*TRSQCP
Trigger: CGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCA...CGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCTGCGGCCCAGTCTTTTaGACACGCTCACAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCCGPVF*TRSQCP
Trigger: CGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCA...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp ACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCTATCCACAACCACTaGAGCGGCCCTGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: TLSETDAQGRKTDAPQPQPIHNH*SGPGHF
Trigger: AAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGG...CTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACACGGCGAATTTCGCCTaGAAGGGGGCTAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAHHPPYTFRDRCPGQENTANFA*KGARAA
Trigger: TGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGT...GTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCACTGCAAGACAGAGCTaGTGCTGTCATTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: DLLQPAAAPGSCGCGVWCTARQS*CCHCRC
Trigger: ACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGT...GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCGGCTTTGACAGTCAGTaGTGGCTGGGGACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HPPYTFRDRCPGQENGCAGFDSQ*WLGTGL
Trigger: AAGGCCAGTCCCCAGCCAGCACTGACTGTCAAAGCC...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp ACAGAAGCCAGAGCGATGATCCTAAATGAAACTCAGCTCAGCACATCCCAGCTCGCAGGCTCTGCTGCCTaGACCCCGCCCACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TEARAMILNETQLSTSQLAGSAA*TPPTGG
Trigger: CCCACCTGTGGGCGGGGTGCAGGCAGCAGAGCCTGC...GAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp GGGGTGGGCGACCAAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCATCCCTGGAGAGGCCCTaGTCACTACCTGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: GVGDQTSGNSWSHKRSPSSLERP*SLPATS
Trigger: GCTGGTAGCAGGTAGTGAGCAGGGCCTCTCCAGGGA...TGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTTGGTCGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGCCATGTCACCCCTTCTaGAAGGCCTTCCTATCCACA +
Preference number: 4 (lower is better)
Translates to: PSAPCPPPAIHFQRQMPRPCHPF*KAFLST
Trigger: TGTGGATAGGAAGGCCTTGCAGAAGGGGTGACATGG...CCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp TTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAATTCCAGCTGTACCCTaGGCACTGTCAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: FQRQMPRAGKRMRLSRSPIPAVP*ALSAAM
Trigger: CATGGCTGCTGACAGTGCGCAGGGTACAGCTGGAAT...TGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp AGCACTGGTGCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGTACGCTTCCTTAAAGAACTaGATCCACTCGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: STGATANFACKGARAAGYASLKN*IHSEVA
Trigger: GGCCACTTCCGAGTGGATCCAGTTCTTTAAGGAAGC...GTACCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGCACCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CCA 90 bp GGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCACTGGTTTCGGGAGGCAGCACTaGTGCCACGGCGAATTTCGC +
Preference number: 4 (lower is better)
Translates to: GWRVMVQAVGDHSGGSTGFGRQH*CHGEFR
Trigger: GCGAAATTCGCCGTGGCACCAGTGCTGCCTCCCGAA...ACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CCA 90 bp TCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGACCAGTGGAAACTCATaGTCTCACAAACGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SETDAQGRKTDAPQPQPRTSGNS*SHKRSP
Trigger: TGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGT...CCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCACTGGTGGGTTCAGGCTGTTGGTaGTCATTCGGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGESWFRLLVIIREAALVGSGCW*SFGRQH
Trigger: GTGCTGCCTCCCGAATGATCACCAACAGCCTGAACC...CACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR TCA 90 bp CCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCGGCCTAACTGAATGGTaGCTGTGGCCATTACTCCCC +
Preference number: 4 (lower is better)
Translates to: PAIHFQRQMPRAGKRMRLGLTEW*LWPLLP
Trigger: GGGGAGTAATGGCCACAGTCACCATTCAGTTAGGCC...GAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCCACATTCCTCCTCCTTaGTCACAACACCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HPPYTFRDRCPGQENGCAHIPPP*SQHPQP
Trigger: TGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTG...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCCAAGGCCCTTGGCTTTaGTTCCAGCTGTACCCTGCG +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCQGPWL*FQLYPA
Trigger: CGCAGGGTACAGCTGGAATCAAAGCCAAGGGCCTTG...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp TGGGGGAAGGGAGGCCCACCAGGTGACACCCACTTAGTTGAGGGGGACAGGGAGTGCACCACTTTGGCATaGTTGAGAATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: WGKGGPPGDTHLVEGDRECTTLA*LRMAMM
Trigger: CATCATCGCCATTCTCAAGCATGCCAAAGTGGTGCA...CTCCCTGTCCCCCTCAACTAAGTGGGTGTCACCTGGTGGGCCTCCCTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGACTCCATCACTGGTaGCACGGCGAATTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: GCAGWRVMVQAVGDHSGGRLHHW*HGEFRL
Trigger: CAGGCGAAATTCGCCGTGGCACCAGTGATGGAGTCT...GCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp CTGTGCACATTCCTCCTCCTTGATCACAACACCCCCAGCCACCTAGCCCCTGCCAGACCTTTTGCAGCCTaGTGCTGCTCCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LCTFLLLDHNTPSHLAPARPFAA*CCSRIL
Trigger: CAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCT...GGCAGGGGCTAGGTGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp ACAGAAGCCAGAGCGATGATCCTAAATGAAACTCAGCTCAGCACATCCCAGCTCCCCGCGTGGTCCATCTaGGCACCAAGGCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TEARAMILNETQLSTSQLPAWSI*APRPSL
Trigger: CAGCGAGGGCCTTGGTGCCCAGATGGACCACGCGGG...GAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAACTCACAGTGCCCGCGTaGTCCATCTGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVELTVPA*SIWAPR
Trigger: CCTTGGTGCCCAGATGGACCACGCGGGCACTGTGAG...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGCTTCCTTAAAGAACTaGATCCACTCGGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSASLKN*IHSEVA
Trigger: AGCCACTTCCGAGTGGATCCAGTTCTTTAAGGAAGC...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392035.6
CDS-3UTR CCA 90 bp CCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCGCCACATTCCCAACTTaGCCTCCATGTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPAIHFQRQMPRAGKRMRATFPT*PPCHPF
Trigger: GAAGGGGTGACATGGAGGCCAAGTTGGGAATGTGGC...GCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CAA 72 bp ATCTTGCGGGTGCGGGGTGTGGTGCCTTTGGGCATGTaGATGACGTACTTCCCCTCCATCTCAGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: ILRVRGVVPLGM*MTYFPSISAVT
Trigger: GGTCACTGCTGAGATGGAGGGGAAGTACGTCATCAACATGCCCAAAGGCACCACACCCCGCACCCGCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp CCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGACCTTGACCTCGGCTaGGGACTTACTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PYTFRDRCPGQENGCASADLDLG*GLTLGA
Trigger: AGCACCAAGAGTAAGTCCTCAGCCGAGGTCAAGGTC...GGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR TCA 90 bp GGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAAAGCACAGAGGACATaGGAGAAGGGGAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GCAGWRVMVQAVGDHSGGKAQRT*EKGSPG
Trigger: TCCAGGACTCCCCTTCTCTCATGTCCTCTGTGCTTT...GCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp TACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCATGTGTGCAGGAAGCCTaGCCTTTAGAGACACAGCCC +
Preference number: 4 (lower is better)
Translates to: YTFRDRCPGQENGCASAACVQEA*PLETQP
Trigger: GGGCTGTGTCTCTAAAGGTCAGGCTTCCTGCACACA...TGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCTGCACCACTTTGGCATaGTTGAGAATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGCTTLA*LRMAMM
Trigger: CATCATCGCCATTCTCAAGCATGCCAAAGTGGTGCA...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCCTTGGCACTCTTTGCTaGCATCTTGTTGGACACAGT +
Preference number: 4 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGLGTLC*HLVGHS
Trigger: ACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAG...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AAGGCCTTCCTATCCACAACCACTGAAGCGGCCCTGGCCACTTTCTCCCACTCCGGCCTTGGCACTCTTTaGTGCCATCTTGTTGGACAC +
Preference number: 4 (lower is better)
Translates to: KAFLSTTTEAALATFSHSGLGTL*CHLVGH
Trigger: GTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCC...GGAGTGGGAGAAAGTGGCCAGGGCCGCTTCAGTGGTTGTGGATAGGAAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp TTAGACAAGGACTCCGGCTTCCTCTCAAGCCCAGACCGTGAGGAAAGCGCCAGGAGACCTTTTGCAGCCTaGTGCTGCTCCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LDKDSGFLSSPDREESARRPFAA*CCSRIL
Trigger: CAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCT...CCTGGCGCTTTCCTCACGGTCTGGGCTTGAGAGGAAGCCGGAGTCCTTGTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAAGACCTTTTGCAGCCTaGTGCTGCTCCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRRPFAA*CCSRIL
Trigger: CAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCT...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp TTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAACTTTCAGAGACAGATaGCCAGGGCAGGAAAACGGA +
Preference number: 4 (lower is better)
Translates to: FQRQMPRAGKRMRLSRSPTFRDR*PGQENG
Trigger: TCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGT...TGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAACTTTCAGAGACAGATaGCCAGGGCAGGAAAACGGA +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQTFRDR*PGQENG
Trigger: TCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGT...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAACTTTCAGAGACAGATaGCCAGGGCAGGAAAACGGA +
Preference number: 4 (lower is better)
Translates to: SAPCPPPAIHFQRQMPRATFRDR*PGQENG
Trigger: TCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGT...TGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp GTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCAACTCAGTGGCAGCTTTaGACATGTCCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGGESWFRLLVIIREAATQWQL*TCPGRQ
Trigger: CTGCCTCCCAGGACATGTGCAAAGCTGCCACTGAGT...TGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CCA 90 bp TGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCTGCTTCCTTAAAGAACTaGATCCACTCGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: CSGLALEPEGDKLCHPGAASLKN*IHSEVA
Trigger: GGCCACTTCCGAGTGGATCCAGTTCTTTAAGGAAGC...AGCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357884.8
ENST00000582783.5
CDS-3UTR CCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAAGGGTACTGACTCAGTaGCAGCTTTGCACATGTCCT +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQRVLTQ*QLCTCP
Trigger: AGGACATGTGCAAAGCTGCCACTGAGTCAGTACCCT...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGACTGGGTGGAGAGTCATaGTTCAGGCTGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRLGGES*FRLLVI
Trigger: GATCACCAACAGCCTGAACCATGACTCTCCACCCAG...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp TGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCTAACACAGACGTCCTATaGAGACCTTTTGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSGLALEPEGDKLCHPGANTDVL*RPFAAC
Trigger: GCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTGTT...AGCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp ATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCAACACAGACGTCCTATaGAGACCTTTTGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: MLGPSSRARGRQAVSSRSNTDVL*RPFAAC
Trigger: GCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTGTT...GCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGTTTACTCCCTGTCGTaGTGTCTGCCTTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCVYSLS*CLPWSR
Trigger: CCGAGACCAAGGCAGACACCACGACAGGGAGTAAAC...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAATTCGGGAGGCAGCACTaGTGCCACGGCGAATTTCGC +
Preference number: 4 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVEFGRQH*CHGEFR
Trigger: GCGAAATTCGCCGTGGCACCAGTGCTGCCTCCCGAA...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp GGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCTTTGCACATGTCCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GVLGGESWFRLLVIIREAALHMS*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCCAGGACATGTGCAAAGC...TGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CCA 90 bp CCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAACTTGCAGCAGGGACATaGACCATGTGTGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PLPTTRHTLSETDAQGRKLAAGT*TMCVQE
Trigger: TTCCTGCACACACATGGTCCATGTCCCTGCTGCAAG...TTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGGGCGACCAAACCAGTaGAAACTCATGGTCTCACAA +
Preference number: 4 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQGRPNQ*KLMVSQ
Trigger: TTGTGAGACCATGAGTTTCCACTGGTTTGGTCGCCC...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
3UTR CAA 72 bp ACCCCGGCATACTGCAAGACAGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: TPAYCKTELLLS*SLSQARSSSVS
Trigger: AGAAACGGACGAGGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp GCACTGGTGCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGTACTTCATTATCTCCTTATTaGGATCCAGCAGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: ALVPRRISPARGLGLQGTSLSPY*DPAACS
Trigger: AGAGCATGCTGCTGGATCTCAATAAGGAGATAATGA...AGTACCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGCACCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR TCA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTTCATTATCTCCTTATTaGGATCCAGCAGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSSLSPY*DPAACS
Trigger: AGAGCATGCTGCTGGATCTCAATAAGGAGATAATGA...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGGCCTTGGCACTCTTTaGTGCCATCTTGTTGGACAC +
Preference number: 4 (lower is better)
Translates to: GVLGGESWFRLLVIIREAGLGTL*CHLVGH
Trigger: GTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCC...TGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR GCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGGCCTTGGCACTCTTTaGTGCCATCTTGTTGGACAC +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCGLGTL*CHLVGH
Trigger: GTGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCC...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCACTCCCGGGTCACTGTaGACATTCCTCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCTPGSL*TFLLLD
Trigger: ATCAAGGAGGAGGAATGTGCACAGTGACCCGGGAGT...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp CCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAAGGGTACTGACTCAGTaGCAGCTTTGCACATGTCCT +
Preference number: 4 (lower is better)
Translates to: PLPTTRHTLSETDAQGRKRVLTQ*QLCTCP
Trigger: AGGACATGTGCAAAGCTGCCACTGAGTCAGTACCCT...TTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp CGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCTGGGTGGAGAGTCATaGTTCAGGCTGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: RHTLSETDAQGRKTDAPQLGGES*FRLLVI
Trigger: GATCACCAACAGCCTGAACCATGACTCTCCACCCAG...CTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CCA 90 bp AGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCACTGGTGCCACGCTGGGTGGAGAGTCATaGTTCAGGCTGTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: RVMVQAVGDHSGGSTGATLGGES*FRLLVI
Trigger: GATCACCAACAGCCTGAACCATGACTCTCCACCCAG...CGTGGCACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CCA 90 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGGAGAAGTCACAGCAGTaGGGGGAGGCGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VETHGLTNGAHHLERCQQEKSQQ*GEAQRS
Trigger: ACTCCTCTGCGCCTCCCCCCACTGCTGTGACTTCTC...CTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGATCATTATCTCCTTATTaGGATCCAGCAGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRSLSPY*DPAACS
Trigger: AGAGCATGCTGCTGGATCTCAATAAGGAGATAATGA...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCCTTGGCACTCTTTGCTaGCATCTTGTTGGACACAGT +
Preference number: 4 (lower is better)
Translates to: HPPYTFRDRCPGQENGCALGTLC*HLVGHS
Trigger: ACTGTGTCCAACAAGATGGCAGCAAAGAGTGCCAAG...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCACTGCAAGACAGAGCTaGTGCTGTCATTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: AIHFQRQMPRAGKRMRLSTARQS*CCHCRC
Trigger: ACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGT...GCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCAGGGCTTTGACAGTCAGTaGTGGCTGGGGACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VETHGLTNGAHHLERCQQGFDSQ*WLGTGL
Trigger: AAGGCCAGTCCCCAGCCAGCACTGACTGTCAAAGCC...CTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp TTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATGGAGACCTTTTGCAAACACAGACGTCCTATaGAGACCTTTTGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LVSAPRRSNTDVLWRPFANTDVL*RPFAAC
Trigger: GCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTGTT...TGCAAAAGGTCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR TCA 90 bp TATATTAAAACAGCAGCTGTCTTCACTCTAGGCACTGGCCTCCCTTCCCAGTGCGGTTCAGGCTGTTGGTaGTCATTCGGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YIKTAAVFTLGTGLPSQCGSGCW*SFGRQH
Trigger: GTGCTGCCTCCCGAATGATCACCAACAGCCTGAACC...GCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAGACAGCTGCTGTTTTAATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGTGCACCACTTTGGCATaGTTGAGAATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRCTTLA*LRMAMM
Trigger: CATCATCGCCATTCTCAAGCATGCCAAAGTGGTGCA...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR GCA 90 bp AGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCACTGGTGCCACGTGCACCACTTTGGCATaGTTGAGAATGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: RVMVQAVGDHSGGSTGATCTTLA*LRMAMM
Trigger: CATCATCGCCATTCTCAAGCATGCCAAAGTGGTGCA...CGTGGCACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR GCA 90 bp AAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCGGACAGTCGGGCCTTaGCACGGGGACAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: KPVETHGLTNGAHHLERCRTVGP*HGDRKQ
Trigger: CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCG...GCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAGGAGAGGTAGAAAAGTaGGTTCTGCCAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVEGEVEK*VLPRPQ
Trigger: CTGTGGCCTTGGCAGAACCCACTTTTCTACCTCTCC...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
3UTR CAA 72 bp GTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTaGGAAAGGTGCCAGCAGGCAGGTGAAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: VETHGLTNGAHH*ERCQQAGEIHG
Trigger: CCCATGGATTTCACCTGCCTGCTGGCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp CTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACAGCGATGATCCTAAATaGAACTCAGCTCAGCACATC +
Preference number: 4 (lower is better)
Translates to: LAHHPPYTFRDRCPGQENSDDPK*NSAQHI
Trigger: GATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCT...GTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp GGTCTGGAGAGGTCCCTCCAGCCTGGGAGTAGAGGGCGGCTAACAGTCTCAACAAAGGAGTGGGGGAAATaGTTTGAAAGTCACAAAAAT +
Preference number: 4 (lower is better)
Translates to: GLERSLQPGSRGRLTVSTKEWGK*FESHKN
Trigger: ATTTTTGTGACTTTCAAATCATTTCCCCCACTCCTT...TGTTGAGACTGTTAGCCGCCCTCTACTCCCAGGCTGGAGGGACCTCTCCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CCA 90 bp ACAGAAGCCAGAGCGATGATCCTAAATGAAACTCAGCTCAGCACATCCCAGCTCGGAGAGGTAGAAAAGTaGGTTCTGCCAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TEARAMILNETQLSTSQLGEVEK*VLPRPQ
Trigger: CTGTGGCCTTGGCAGAACCCACTTTTCTACCTCTCC...GAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR TCA 90 bp AAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCCAGCTGCGCATAGTGTaGAACAGTCCTGCAACTCAC +
Preference number: 4 (lower is better)
Translates to: KPVETHGLTNGAHHLERCQLRIV*NSPATH
Trigger: GTGAGTTGCAGGACTGTTTCACACTATGCGCAGCTG...GCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR GCA 90 bp TATATTAAAACAGCAGCTGTCTTCACTCTAGGCACTGGCCTCCCTTCCCAGTGCACTGCAAGACAGAGCTaGTGCTGTCATTGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: YIKTAAVFTLGTGLPSQCTARQS*CCHCRC
Trigger: ACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGT...GCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAGACAGCTGCTGTTTTAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR GCA 90 bp ACAGAAGCCAGAGCGATGATCCTAAATGAAACTCAGCTCAGCACATCCCAGCTCCATCATTTGGAAAGGTaGCAGCAGGCAGGTGAAATC +
Preference number: 4 (lower is better)
Translates to: TEARAMILNETQLSTSQLHHLER*QQAGEI
Trigger: GATTTCACCTGCCTGCTGGCACCTTTCCAAATGATG...GAGCTGGGATGTGCTGAGCTGAGTTTCATTTAGGATCATCGCTCTGGCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp GGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGGTCGTGGTGTCTGCCTaGGTCTCGGCGCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GSTPPPTRGPLGGRRYRRVVVSA*VSAPRR
Trigger: CCGCCTCGGCGCCGAGACCAAGGCAGACACCACGAC...CCTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGATGCTGCTCCAGGATCTaGCGGGTGCGGGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: QARRHRRRGGRWEAGGTGCCSRI*RVRGVV
Trigger: CACCACACCCCGCACCCGCAAGATCCTGGAGCAGCA...TCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp GGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGGCTGCGGCCCAGTCTTTaGAACACGCTCACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: GSTPPPTRGPLGGRRYRRLRPSL*NTLTVP
Trigger: GGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAG...CCTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp TGGGGGAAGGGAGGCCCACCAGGTGACACCCACTTAGTTGAGGGGGACAGGGAGGGCTGGGGACTGGCCTaGGCTGGGCCCCGTCCTAGC +
Preference number: 5 (lower is better)
Translates to: WGKGGPPGDTHLVEGDREGWGLA*AGPRPS
Trigger: GCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGCC...CTCCCTGTCCCCCTCAACTAAGTGGGTGTCACCTGGTGGGCCTCCCTTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp TCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGGCTGGGGACTGGCCTaGGCTGGGCCCCGTCCTAGC +
Preference number: 5 (lower is better)
Translates to: SETDAQGRKTDAPQPQPRGWGLA*AGPRPS
Trigger: GCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGCC...CCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp GAGTGGGGGAAGGGAGGCCCACCAGGTGACACCCACTTAGTTGAGGGGGACAGGGTGACCCGGCGCCGCTaGGCAGGAACAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EWGKGGPPGDTHLVEGDRVTRRR*AGTARL
Trigger: GAGCCTGGCTGTTCCTGCCAAGCGGCGCCGGGTCAC...CCTGTCCCCCTCAACTAAGTGGGTGTCACCTGGTGGGCCTCCCTTCCCCCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGAGGCTGGGGACTGGCCTaGGCTGGGCCCCGTCCTAGC +
Preference number: 5 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRGWGLA*AGPRPS
Trigger: GCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGCC...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp GGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGTCGGGGCAGCAGCCGTaGTCGCTGAGCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GSGRTQRTVGPCHGDRKQSGQQP*SLSLWP
Trigger: AGGCCACAAGCTCAGCGACAACGGCTGCTGCCCCGA...CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGAAGCCCCCTGGCACTaGGGAGAGGTAGAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: QQARRHRRRGGRWEAGGTEAPWH*GEVEKW
Trigger: CCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTC...TGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGGAGTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RLDATADEGAAGRPEVQESWFRL*VIIREA
Trigger: TGCCTCCCGAATGATCACCAACAGCCTGAACCATGA...CTCCTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCGTGACCCGGCGCCGCTaGGCAGGAACAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGVTRRR*AGTARL
Trigger: GAGCCTGGCTGTTCCTGCCAAGCGGCGCCGGGTCAC...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGTCGTGGTGTCTGCCTaGGTCTCGGCGCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PSAPCPPPAIHFQRQMPRVVVSA*VSAPRR
Trigger: CCGCCTCGGCGCCGAGACCAAGGCAGACACCACGAC...CCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGGCTGGGGACTGGCCTaGGCTGGGCCCCGTCCTAGC +
Preference number: 5 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQGWGLA*AGPRPS
Trigger: GCTAGGACGGGGCCCAGCCAAGGCCAGTCCCCAGCC...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACAGCTCTTTGCTGCCATCTaGTTGGACACAGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: NRLDATADEGAAGRPEVQLFAAI*LDTVTE
Trigger: CTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAG...CTGTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTCCTTCCCAGTGCCCCTaGCCCACCACCCGCCATACA +
Preference number: 5 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSPSQCP*PTTRHT
Trigger: TGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAGG...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCGTGACCCGGCGCCGCTaGGCAGGAACAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HPPYTFRDRCPGQENGCAVTRRR*AGTARL
Trigger: GAGCCTGGCTGTTCCTGCCAAGCGGCGCCGGGTCAC...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AGGCGGCTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCGTCGTGGTGTCTGCCTaGGTCTCGGCGCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RRLKTPVGLLPVVVSALVVVVSA*VSAPRR
Trigger: CCGCCTCGGCGCCGAGACCAAGGCAGACACCACGAC...GACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAGCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp TCAACAGGCTCGACGCCACCGCCGACGAGGGGGCCGCTGGGAGGCCGGAGGTACCTCTTAATGGTGACCTaGACCTCGGCTGAGGACTTA +
Preference number: 5 (lower is better)
Translates to: STGSTPPPTRGPLGGRRYLLMVT*TSAEDL
Trigger: TAAGTCCTCAGCCGAGGTCAAGGTCACCATTAAGAG...GTACCTCCGGCCTCCCAGCGGCCCCCTCGTCGGCGGTGGCGTCGAGCCTGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CGACGACCATCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTCCTTCCCAGTGCCCCTaGCCCACCACCCGCCATACA +
Preference number: 5 (lower is better)
Translates to: RRPSQARRNGVIPRMLGPPSQCP*PTTRHT
Trigger: TGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAGG...AGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGATGGTCGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAAACCACTACGGCTTATaGGGGGCAGGGGGCGGCCTA +
Preference number: 5 (lower is better)
Translates to: RAGRSGQSGLATGTENRRNHYGL*GAGGGL
Trigger: TAGGCCGCCCCCTGCCCCCAATAAGCCGTAGTGGTT...TCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp CCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCGGACAGTCGGGCTCTaGGTGCTGGTGACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PVPLAHHPPYTFRDRCPGRTVGL*VLVTWL
Trigger: CAGCCAGGTCACCAGCACCAAGAGCCCGACTGTCCG...CCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584868.1
CDS CCA 90 bp TCTGCCTTGGTCTCGGCGCCGAGGCGGTCAAACACAGACGTCCTATaGAGACCTGGGAGGGAAGTGAAGCCATCAGGGAGAGGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: SALVSAPRRSNTDVL*RPGREVKPSGRGPG
Trigger: ACCGGGGCCTCTCCCTGATGGCTTCACTTCCCTCCCAGGTCTCCATAGGACGTCTGTGTTTGACCGCCTCGGCGCCGAGACCAAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS-3UTR CAA 90 bp CCAGACCGTGAGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGTCCTCTTTGCTGCCATCTaGTTGGACACAGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: PDREESARRRSVGAAAVVLFAAI*LDTVTE
Trigger: CTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAG...GACAACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp CTAGAAGGTCCTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTGGTCTCGGGGCAGCAGCCGTaGTCGCTGAGCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LEGPAAQSFEHAHSARVVSGQQP*SLSLWP
Trigger: AGGCCACAAGCTCAGCGACAACGGCTGCTGCCCCGA...GACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAGGACCTTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp GGGTCGGGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGCACTCCTCAGATTCCTaGGCCAGCACCACCGCTTTA +
Preference number: 5 (lower is better)
Translates to: GSGRTQRTVGPCHGDRKQHSSDS*ASTTAL
Trigger: TAAAGCGGTGGTGCTGGCCAAGGAATCTGAGGAGTG...CTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCCCGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS TCA 90 bp GCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGTACTaGCTCAGTGGCAGCTTTGCACATGTCCTGGGAGGCAGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: ATANFACKGARAAGY*LSGSFAHVLGGRGC
Trigger: GCAACCTCTGCCTCCCAGGACATGTGCAAAGCTGCCACTGAGTCAGTACCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CAA 90 bp CTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCTCGGCGTGCTGCTCCAGGATCTaGCGGGTGCGGGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LKTPVGLLPVVVSALVSACCSRI*RVRGVV
Trigger: CACCACACCCCGCACCCGCAAGATCCTGGAGCAGCA...CGCCGAGACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp ACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGTCCTATGGAGACCTTTaGCAGCCTGCTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: TDAQGRKTDAPQPQPRVWSYGDL*QPAAAP
Trigger: TGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGA...CCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp ACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTGGGCTGAGCTTGTGGCCTaGGCTTTGACAGTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: TDAQGRKTDAPQPQPRVWAELVA*ALTVSA
Trigger: AGCACTGACTGTCAAAGCCAAGGCCACAAGCTCAGC...CCAGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp CACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCGGGGCAGCAGCCGTaGTCGCTGAGCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HPPYTFRDRCPGQENGCASGQQP*SLSLWP
Trigger: AGGCCACAAGCTCAGCGACAACGGCTGCTGCCCCGA...GGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp GAGTGGGGGAAGGGAGGCCCACCAGGTGACACCCACTTAGTTGAGGGGGACAGGGCCCAGCCAAGGCCCTaGGCTTTGATTCCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: EWGKGGPPGDTHLVEGDRAQPRP*ALIPAV
Trigger: TACAGCTGGAATCAAAGCCAAGGGCCTTGGCTGGGC...CCTGTCCCCCTCAACTAAGTGGGTGTCACCTGGTGGGCCTCCCTTCCCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp CCAGACCGTGAGGAAAGCGCCAGGCGCCGCAGTGTCGGGGCAGCAGCCGTTGTCACCACTTTGGCATGCTaGAGAATGGCGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: PDREESARRRSVGAAAVVTTLAC*RMAMMS
Trigger: TGACATCATCGCCATTCTCAAGCATGCCAAAGTGGT...GACAACGGCTGCTGCCCCGACACTGCGGCGCCTGGCGCTTTCCTCACGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp CGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGTCGGGGCAGCAGCCGTaGTCGCTGAGCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: RHTLSETDAQGRKTDAPQSGQQP*SLSLWP
Trigger: AGGCCACAAGCTCAGCGACAACGGCTGCTGCCCCGA...CTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp CTAGAAGGTCCTGCGGCCCAGTCTTTTGAACACGCTCACAGTGCCCGCGTGGTCCTGCGGCCCAGTCTTTaGAACACGCTCACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: LEGPAAQSFEHAHSARVVLRPSL*NTLTVP
Trigger: GGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAG...GACCACGCGGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAGGACCTTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp TTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCACTGCGGCCCAGTCTTTaGAACACGCTCACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: FQRQMPRAGKRMRLSRSPLRPSL*NTLTVP
Trigger: GGGCACTGTGAGCGTGTTCAAAAGACTGGGCCGCAG...TGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCGAAGCCCCCTGGCACTaGGGAGAGGTAGAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: QCPLPTTRHTLSETDAQGEAPWH*GEVEKW
Trigger: CCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTC...GCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAGCGGACAGTCGGGCCTaGCCACGGGGACAGAAAACA +
Preference number: 5 (lower is better)
Translates to: PLPTTRHTLSETDAQGRKADSRA*PRGQKT
Trigger: TGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGC...TTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCGCGGACAGTCGGGCCTaGCCACGGGGACAGAAAACA +
Preference number: 5 (lower is better)
Translates to: PPAIHFQRQMPRAGKRMRADSRA*PRGQKT
Trigger: TGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGC...GCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS TCA 90 bp GCCACGGCGAATTTCGCCTGCAAGGGGGCTAGGGCTGCAGGGTACTaGCTCAGTGGCAGCTTTGCACATGTCCTGACGGTGCACCACTTT +
Preference number: 5 (lower is better)
Translates to: ATANFACKGARAAGY*LSGSFAHVLTVHHF
Trigger: AAAGTGGTGCACCGTCAGGACATGTGCAAAGCTGCCACTGAGTCAGTACCCTGCAGCCCTAGCCCCCTTGCAGGCGAAATTCGCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000580606.5
ENST00000582006.5
ENST00000582783.5
ENST00000683109.1
CDS-3UTR CAA 90 bp AGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCCCAGGGTCTTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RQMPRAGKRMRLSRSPGSSWFRL*VIIREA
Trigger: TGCCTCCCGAATGATCACCAACAGCCTGAACCATGA...AGACCCTGGGCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp ACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGACAGTGACCGAGATCTaGGAGGTGCTGGTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: TLSETDAQGRKTDAPQPQTVTEI*EVLVSG
Trigger: CCCGGACACCAGCACCTCCAAGATCTCGGTCACTGT...CTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp ATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCCGGGGTGTGGTGCCTTaGGGCATGTTGATGACGTAC +
Preference number: 5 (lower is better)
Translates to: MLGPSSRARGRQAVSSRSRGVVP*GMLMTY
Trigger: GTACGTCATCAACATGCCCAAAGGCACCACACCCCG...GCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGCGGGGTGTGGTGCCTTaGGGCATGTTGATGACGTAC +
Preference number: 5 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRRGVVP*GMLMTY
Trigger: GTACGTCATCAACATGCCCAAAGGCACCACACCCCG...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGTCCTATGGAGACCTTTaGCAGCCTGCTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: PVPLAHHPPYTFRDRCPGSYGDL*QPAAAP
Trigger: TGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGA...CCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp ATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGAGCGCTGAGGACTTACTCTaGGTGCTGGTGACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MLGPSSRARGRQAVSSRSAEDLL*VLVTWL
Trigger: CAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGC...GCTCCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGCAGCGCTGAGGACTTACTCTaGGTGCTGGTGACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HFQRQMPRAGKRMRLSRSAEDLL*VLVTWL
Trigger: CAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGC...GCTGCGGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGAAGCCCCCTGGCACTaGGGAGAGGTAGAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: NGVIPRMLGPSSRARGRQEAPWH*GEVEKW
Trigger: CCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTC...TTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp GGCAGGACGCAGCGGACAGTCGGGCCTTGCCACGGGGACAGAAAACAGAAGAGAAACGGAGCCCATCATTaGGAAAGGTGCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GRTQRTVGPCHGDRKQKRNGAHH*ERCQQA
Trigger: TGCCTGCTGGCACCTTTCCAAATGATGGGCTCCGTT...TCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGCGTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGACAGTGACCGAGATCTaGGAGGTGCTGGTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRTVTEI*EVLVSG
Trigger: CCCGGACACCAGCACCTCCAAGATCTCGGTCACTGT...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PAIHFQRQMPRAGKRMRLELLLS*SLSQAR
Trigger: TCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTC...GAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp CCCAGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCTGCGCCCAGTCTCTaGATGATGCTGACTTTAGAC +
Preference number: 5 (lower is better)
Translates to: PSAPCPPPAIHFQRQMPRAAPSL*MMLTLD
Trigger: GTCTAAAGTCAGCATCATCAAGAGACTGGGCGCAGC...CCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp GACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGGTGCGGGGTGTGGTGCCTCTTAATGGTGACCTaGACCTCGGCTGAGGACTTA +
Preference number: 5 (lower is better)
Translates to: DLLQPAAAPGSCGCGVWCLLMVT*TSAEDL
Trigger: TAAGTCCTCAGCCGAGGTCAAGGTCACCATTAAGAG...GCACCACACCCCGCACCCGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp TGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGGTGCCTTTGGGCATGTaGATGACGTACTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: CPPPAIHFQRQMPRAGKRVPLGM*MTYFPS
Trigger: GGAGGGGAAGTACGTCATCAACATGCCCAAAGGCAC...CCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTTGCTGCTCCAGGATCTaGCGGGTGCGGGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: NVGEEEAPWHLGEVEKWVCCSRI*RVRGVV
Trigger: CACCACACCCCGCACCCGCAAGATCCTGGAGCAGCA...AACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp TTAGACAAGGACTCCGGCTTCCTCTCAAGCCCAGACCGTGAGGAAAGCGCCAGGTCCTATGGAGACCTTTaGCAGCCTGCTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LDKDSGFLSSPDREESARSYGDL*QPAAAP
Trigger: TGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGA...CCTGGCGCTTTCCTCACGGTCTGGGCTTGAGAGGAAGCCGGAGTCCTTGTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp CACAGACGTCCTATGGAGACCTTTTGCAGCCTGCTGCTGCTCCAGGATCTTGCGGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: HRRPMETFCSLLLLQDLAELLLS*SLSQAR
Trigger: TCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTC...CGCAAGATCCTGGAGCAGCAGCAGGCTGCAAAAGGTCTCCATAGGACGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp GCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: AIHFQRQMPRAGKRMRLSELLLS*SLSQAR
Trigger: TCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTC...GCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp GGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCGCTGAGCTTGTGGCCTaGGCTTTGACAGTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GCAGWRVMVQAVGDHSGGAELVA*ALTVSA
Trigger: AGCACTGACTGTCAAAGCCAAGGCCACAAGCTCAGC...GCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp TCCCAGGCTAGGAGAAATGGGGTGATCCCCCGAATGCTCGGGCCTAGCTCTAGAGCTGAGCTTGTGGCCTaGGCTTTGACAGTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SQARRNGVIPRMLGPSSRAELVA*ALTVSA
Trigger: AGCACTGACTGTCAAAGCCAAGGCCACAAGCTCAGC...TCTAGAGCTAGGCCCGAGCATTCGGGGGATCACCCCATTTCTCCTAGCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CTGTGCACATTCCTCCTCCTTGATCACAACACCCCCAGCCACCTAGCCCCTGCCGCTGCGCCCAGTCTCTaGATGATGCTGACTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LCTFLLLDHNTPSHLAPAAAPSL*MMLTLD
Trigger: GTCTAAAGTCAGCATCATCAAGAGACTGGGCGCAGC...GGCAGGGGCTAGGTGGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp AGTGCCCCTTGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGCTGCGCCCAGTCTCTaGATGATGCTGACTTTAGAC +
Preference number: 5 (lower is better)
Translates to: SAPCPPPAIHFQRQMPRAAAPSL*MMLTLD
Trigger: GTCTAAAGTCAGCATCATCAAGAGACTGGGCGCAGC...TGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCAAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGGCTGAGGACTTACTCTaGGTGCTGGTGACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRAEDLL*VLVTWL
Trigger: CAGCCAGGTCACCAGCACCAAGAGTAAGTCCTCAGC...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGCCAAGGCCCTTGGCTTaGATTCCAGCTGTACCCTGC +
Preference number: 5 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRPRPLA*IPAVPC
Trigger: GCAGGGTACAGCTGGAATCAAAGCCAAGGGCCTTGG...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS CCA 90 bp GGTGCTTTGCCGGCCTCCCAGTTTTTAGAGGATGTCACCTGTGCCTaGAATGCCTGTCTCCTCCTGGCAACCTATCCTTCCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GALPASQFLEDVTCA*NACLLLATYPSFCS
Trigger: GGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGACAGGCATTCCAGGCACAGGTGACATCCTCTAAAAACTGGGAGGCCGGCAAAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS-3UTR CAA 90 bp TTGTCGCTGTCCCAAGCCAGATCCTCGTCCGTTTCTGGGGTGGCCCCCAGGCGGTTCATTATCTCCTTATaGAGATCCAGCAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: LSLSQARSSSVSGVAPRRFIISL*RSSSML
Trigger: GAGCATGCTGCTGGATCTCAATAAGGAGATAATGAA...CCGCCTGGGGGCCACCCCAGAAACGGACGAGGATCTGGCTTGGGACAGCGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp GGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GCAGWRVMVQAVGDHSGGSWFRL*VIIREA
Trigger: TGCCTCCCGAATGATCACCAACAGCCTGAACCATGA...GCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357884.8
ENST00000580977.1
CDS-3UTR CAA 90 bp TGCCCACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGCTCTTTGCTGCCATCTaGTTGGACACAGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: CPPPAIHFQRQMPRAGKRLFAAI*LDTVTE
Trigger: CTCGGTCACTGTGTCCAACAAGATGGCAGCAAAGAG...CCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCTCAGATTCCTTGGCCAGCACCACCGCTTTACCTACACCCCATCCCTGGAGAGTGGCCTTGGCACTCTTaGCTGCCATCTTGTTGGACA +
Preference number: 5 (lower is better)
Translates to: PQIPWPAPPLYLHPIPGEWPWHS*LPSCWT
Trigger: TGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCA...CTCTCCAGGGATGGGGTGTAGGTAAAGCGGTGGTGCTGGCCAAGGAATCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp GAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTCTGCCAAGGGTGCCTTTGGGCATGTaGATGACGTACTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: EEEAPWHLGEVEKWVLPRVPLGM*MTYFPS
Trigger: GGAGGGGAAGTACGTCATCAACATGCCCAAAGGCAC...CCTTGGCAGAACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp CCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCGCCTCAGCCGTGCCTTTGGGCATGTaGATGACGTACTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: PYTFRDRCPGQENGCASAVPLGM*MTYFPS
Trigger: GGAGGGGAAGTACGTCATCAACATGCCCAAAGGCAC...GGCTGAGGCGCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AGGCGGCTGAAGACTCCTGTGGGTTTACTCCCTGTCGTGGTGTCTGCCTTGGTCGCTGCGCCCAGTCTCTaGATGATGCTGACTTTAGAC +
Preference number: 5 (lower is better)
Translates to: RRLKTPVGLLPVVVSALVAAPSL*MMLTLD
Trigger: GTCTAAAGTCAGCATCATCAAGAGACTGGGCGCAGC...GACCAAGGCAGACACCACGACAGGGAGTAAACCCACAGGAGTCTTCAGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS-3UTR CAA 90 bp TATATTAAAACAGCAGCTGTCTTCACTCTAGGCACTGGCCTCCCTTCCCAGTGCCCTTCCCAGTGCCCCTaGCCCACCACCCGCCATACA +
Preference number: 5 (lower is better)
Translates to: YIKTAAVFTLGTGLPSQCPSQCP*PTTRHT
Trigger: TGTATGGCGGGTGGTGGGCAAGGGGCACTGGGAAGG...GCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAGACAGCTGCTGTTTTAATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS GCA 90 bp TTTGCCGGCCTCCCAGTTTTTAGAGGATGTCACCTGTGCCTGGAATaGCTGTCTCCTCCTGGCAACCTATCCTTCCTTCTGCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: FAGLPVFRGCHLCLE*LSPPGNLSFLLLHC
Trigger: GCAGTGGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGACAGGCATTCCAGGCACAGGTGACATCCTCTAAAAACTGGGAGGCCGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS-3UTR CAA 90 bp GGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCAGCACTGGTGTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GGESWFRLLVIIREAALVSWFRL*VIIREA
Trigger: TGCCTCCCGAATGATCACCAACAGCCTGAACCATGA...CACCAGTGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580977.1
CDS-3UTR CAA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCTGGCCTTGGCACTCTTaGCTGCCATCTTGTTGGACA +
Preference number: 5 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCWPWHS*LPSCWT
Trigger: TGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCA...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AAGAAGGGGAATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAACGGGGTGTGGTGCCTTaGGGCATGTTGATGACGTAC +
Preference number: 5 (lower is better)
Translates to: KKGNVGEEEAPWHLGEVERGVVP*GMLMTY
Trigger: GTACGTCATCAACATGCCCAAAGGCACCACACCCCG...TTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATTCCCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS CCA 90 bp AGGCAGGGCCAGACTGTGCTGAGTTGGGTGTTATGTCTACACTGTTaGCTCACACTGACCCTAACCCACCCCTATCTGGCTAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: RQGQTVLSWVLCLHC*LTLTLTHPYLARAK
Trigger: TTTGGCTCTAGCCAGATAGGGGTGGGTTAGGGTCAGTGTGAGCCAACAGTGTAGACATAACACCCAACTCAGCACAGTCTGGCCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS-3UTR CAA 90 bp CACCACCCGCCATACACTTTCAGAGACAGATGCCCAGGGCAGGAAAACGGATGCCTCTTAATGGTGACCTaGACCTCGGCTGAGGACTTA +
Preference number: 5 (lower is better)
Translates to: HHPPYTFRDRCPGQENGCLLMVT*TSAEDL
Trigger: TAAGTCCTCAGCCGAGGTCAAGGTCACCATTAAGAG...GCATCCGTTTTCCTGCCCTGGGCATCTGTCTCTGAAAGTGTATGGCGGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS GCA 90 bp TGTGCCTGGAATGCCTGTCTCCTCCTGGCAACCTATCCTTCCTTCTaGTCCACTGCCATCTACTTTGTGACACTTTCCCTAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: CAWNACLLLATYPSF*STAIYFVTLSLSPH
Trigger: GTGGGGACTTAGGGAAAGTGTCACAAAGTAGATGGCAGTGGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGACAGGCATTCCAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS-3UTR CAA 90 bp CGAATGCTCGGGCCTAGCTCTAGAGCCCGAGGGAGACAAGCTGTGTCATCCAGGTTCATTATCTCCTTATaGAGATCCAGCAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: RMLGPSSRARGRQAVSSRFIISL*RSSSML
Trigger: GAGCATGCTGCTGGATCTCAATAAGGAGATAATGAA...CCTGGATGACACAGCTTGTCTCCCTCGGGCTCTAGAGCTAGGCCCGAGCATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp GGTCTGGAGAGGTCCCTCCAGCCTGGGAGTAGAGGGCGGCTAACAGTCTCAACATTCATTATCTCCTTATaGAGATCCAGCAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: GLERSLQPGSRGRLTVSTFIISL*RSSSML
Trigger: GAGCATGCTGCTGGATCTCAATAAGGAGATAATGAA...TGTTGAGACTGTTAGCCGCCCTCTACTCCCAGGCTGGAGGGACCTCTCCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp AAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCACAGTGACCGAGATCTaGGAGGTGCTGGTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: KPVETHGLTNGAHHLERCTVTEI*EVLVSG
Trigger: CCCGGACACCAGCACCTCCAAGATCTCGGTCACTGT...GCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp TATATTAAAACAGCAGCTGTCTTCACTCTAGGCACTGGCCTCCCTTCCCAGTGCGAGCTGCTGCTGTCATaGTCGCTGTCCCAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: YIKTAAVFTLGTGLPSQCELLLS*SLSQAR
Trigger: TCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTC...GCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAGACAGCTGCTGTTTTAATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392035.6
ENST00000582783.5
ENST00000584868.1
CDS-3UTR CAA 90 bp AATGTAGGAGAGGAAGAAGCCCCCTGGCACTTGGGAGAGGTAGAAAAGTGGGTTTGGCCTTGGCACTCTTaGCTGCCATCTTGTTGGACA +
Preference number: 5 (lower is better)
Translates to: NVGEEEAPWHLGEVEKWVWPWHS*LPSCWT
Trigger: TGTCCAACAAGATGGCAGCAAAGAGTGCCAAGGCCA...AACCCACTTTTCTACCTCTCCCAAGTGCCAGGGGGCTTCTTCCTCTCCTACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357884.8
ENST00000392035.6
ENST00000582783.5
CDS-3UTR CAA 90 bp TATATTAAAACAGCAGCTGTCTTCACTCTAGGCACTGGCCTCCCTTCCCAGTGCAGCCACATTCCCAACTaGGCCTCCATGTCACCCCTT +
Preference number: 5 (lower is better)
Translates to: YIKTAAVFTLGTGLPSQCSHIPN*ASMSPL
Trigger: AAGGGGTGACATGGAGGCCAAGTTGGGAATGTGGCT...GCACTGGGAAGGGAGGCCAGTGCCTAGAGTGAAGACAGCTGCTGTTTTAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS-3UTR CAA 90 bp AAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCGCACATTCCTCCTCCTaGATCACAACACCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: KPVETHGLTNGAHHLERCAHSSS*ITTPPA
Trigger: GGCTGGGGGTGTTGTGATCAAGGAGGAGGAATGTGC...GCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS TCA 90 bp GACCAGCTACAAGTGGCAGATTCCCTACACCTCAGCACTAGCTCATaGACTGTGTGCACGGGAAGAGTTCTTAGTGCCTGCATGTTCCTT +
Preference number: 5 (lower is better)
Translates to: DQLQVADSLHLSTSS*TVCTGRVLSACMFL
Trigger: AAGGAACATGCAGGCACTAAGAACTCTTCCCGTGCACACAGTTCATGAGCTAGTGCTGAGGTGTAGGGAATCTGCCACTTGTAGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS CCA 90 bp ACCCCTATCTGGCTAGAGCCAAATGTGGGAAAGACCAGCTACAAGTaGCAGATTCCCTACACCTCAGCACTAGCTCATGAACTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: TPIWLEPNVGKTSYK*QIPYTSALAHELCA
Trigger: TGCACACAGTTCATGAGCTAGTGCTGAGGTGTAGGGAATCTGCCACTTGTAGCTGGTCTTTCCCACATTTGGCTCTAGCCAGATAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS-3UTR CAA 90 bp GGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTTGGTGATCATTCGGGAGGCATTCATTATCTCCTTATaGAGATCCAGCAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: GVLGGESWFRLLVIIREAFIISL*RSSSML
Trigger: GAGCATGCTGCTGGATCTCAATAAGGAGATAATGAA...TGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357884.8
ENST00000580977.1
CDS-3UTR CAA 90 bp AAACCAGTGGAAACTCATGGTCTCACAAACGGAGCCCATCATTTGGAAAGGTGCGCTGAGCTTGTGGCCTaGGCTTTGACAGTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: KPVETHGLTNGAHHLERCAELVA*ALTVSA
Trigger: AGCACTGACTGTCAAAGCCAAGGCCACAAGCTCAGC...GCACCTTTCCAAATGATGGGCTCCGTTTGTGAGACCATGAGTTTCCACTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582783.5
CDS GCA 90 bp GAATGCCTGTCTCCTCCTGGCAACCTATCCTTCCTTCTGCTCCACTaGCATCTACTTTGTGACACTTTCCCTAAGTCCCCACATATGAGA +
Preference number: 5 (lower is better)
Translates to: ECLSPPGNLSFLLLH*HLLCDTFPKSPHMR
Trigger: TCTCATATGTGGGGACTTAGGGAAAGTGTCACAAAGTAGATGGCAGTGGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGACAGGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS TCA 72 bp CCTGACACTGCTCCCTGGAGCCGCCGGAAGCTGAACTaGCTCGTCCGCGGCCGCTCTACCCCAACAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PDTAPWSRRKLN*LVRGRSTPTGR
Trigger: GCGGCCTGTTGGGGTAGAGCGGCCGCGGACGAGTCAGTTCAGCTTCCGGCGGCTCCAGGGAGCAGTGTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580977.1
ENST00000582783.5
CDS CCA 72 bp ACGCAGCGGACAGTCGGGCTCTTGGTGCTGGTGACCTaGCTGTCCTGGGCCTCGGGCACAAGGGCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: TQRTVGLLVLVT*LSWASGTRAAA
Trigger: CGCAGCTGCCCTTGTGCCCGAGGCCCAGGACAGCCAGGTCACCAGCACCAAGAGCCCGACTGTCCGCTGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584868.1
CDS TCA 72 bp ACTGGATCCACTCGGAAGTGGCGCCGGAAGCTGAACTaGCTCGTCCGCGGCCGCTCTACCCCAACAGGCCGC +
Preference number: 6 (lower is better)
Translates to: TGSTRKWRRKLN*LVRGRSTPTGR
Trigger: GCGGCCTGTTGGGGTAGAGCGGCCGCGGACGAGTCAGTTCAGCTTCCGGCGCCACTTCCGAGTGGATCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582006.5
CDS TCA 72 bp CAAACACAGACGTCCTATGGAGACCTGGGAGGGAAGTaGAGCCATCAGGGAGAGGCCCCGGTGGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: QTQTSYGDLGGK*SHQGEAPVGQA
Trigger: GGCCTGGCCCACCGGGGCCTCTCCCTGATGGCTTCACTTCCCTCCCAGGTCTCCATAGGACGTCTGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS CAA 72 bp GGGGGTGTGCTGGGTGGAGAGTCATGGTTCAGGCTGTaGGTGATCATTCGGGAGGCAGCTGTAATCCCAGCT +
Preference number: 6 (lower is better)
Translates to: GGVLGGESWFRL*VIIREAAVIPA
Trigger: AGCTGGGATTACAGCTGCCTCCCGAATGATCACCAACAGCCTGAACCATGACTCTCCACCCAGCACACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357884.8
CDS CCA 72 bp CCGGCCTCCCAGTTTTTAGAGGATGTCACCTGTGCCTaGAATGCCTGTCTCCTCCTGGCAACCTATCCTTCC +
Preference number: 6 (lower is better)
Translates to: PASQFLEDVTCA*NACLLLATYPS
Trigger: GGAAGGATAGGTTGCCAGGAGGAGACAGGCATTCCAGGCACAGGTGACATCCTCTAAAAACTGGGAGGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS CAA 90 bp CAGACACCAGTAGCTCTGGGACAGGCAGGGCCAGACTGTGCTGAGTaGGGTGTTATGTCTACACTGTTGGCTCACACTGACCCTAACCCA +
Preference number: 6 (lower is better)
Translates to: QTPVALGQAGPDCAE*GVMSTLLAHTDPNP
Trigger: TGGGTTAGGGTCAGTGTGAGCCAACAGTGTAGACATAACACCCAACTCAGCACAGTCTGGCCCTGCCTGTCCCAGAGCTACTGGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS TCA 72 bp ACCAGTAGCTCTGGGACAGGCAGGGCCAGACTGTGCTaGGTTGGGTGTTATGTCTACACTGTTGGCTCACAC +
Preference number: 6 (lower is better)
Translates to: TSSSGTGRARLC*VGCYVYTVGSH
Trigger: GTGTGAGCCAACAGTGTAGACATAACACCCAACTCAGCACAGTCTGGCCCTGCCTGTCCCAGAGCTACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS GCA 72 bp TTTGCCGGCCTCCCAGTTTTTAGAGGATGTCACCTGTaGCTGGAATGCCTGTCTCCTCCTGGCAACCTATCC +
Preference number: 6 (lower is better)
Translates to: FAGLPVFRGCHL*LECLSPPGNLS
Trigger: GGATAGGTTGCCAGGAGGAGACAGGCATTCCAGGCACAGGTGACATCCTCTAAAAACTGGGAGGCCGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS CCA 72 bp AGGATGTCACCTGTGCCTGGAATGCCTGTCTCCTCCTaGCAACCTATCCTTCCTTCTGCTCCACTGCCATCT +
Preference number: 6 (lower is better)
Translates to: RMSPVPGMPVSS*QPILPSAPLPS
Trigger: AGATGGCAGTGGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGACAGGCATTCCAGGCACAGGTGACATCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS CAA 72 bp GTAGCTCTGGGACAGGCAGGGCCAGACTGTGCTGAGTaGGGTGTTATGTCTACACTGTTGGCTCACACTGAC +
Preference number: 6 (lower is better)
Translates to: VALGQAGPDCAE*GVMSTLLAHTD
Trigger: GTCAGTGTGAGCCAACAGTGTAGACATAACACCCAACTCAGCACAGTCTGGCCCTGCCTGTCCCAGAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS CAA 72 bp CCAGACTGTGCTGAGTTGGGTGTTATGTCTACACTGTaGGCTCACACTGACCCTAACCCACCCCTATCTGGC +
Preference number: 6 (lower is better)
Translates to: PDCAELGVMSTL*AHTDPNPPLSG
Trigger: GCCAGATAGGGGTGGGTTAGGGTCAGTGTGAGCCAACAGTGTAGACATAACACCCAACTCAGCACAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS TCA 72 bp CAAGTGGCAGATTCCCTACACCTCAGCACTAGCTCATaGACTGTGTGCACGGGAAGAGTTCTTAGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: QVADSLHLSTSS*TVCTGRVLSAC
Trigger: GCAGGCACTAAGAACTCTTCCCGTGCACACAGTTCATGAGCTAGTGCTGAGGTGTAGGGAATCTGCCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS CCA 72 bp CAGACTGTGCTGAGTTGGGTGTTATGTCTACACTGTTaGCTCACACTGACCCTAACCCACCCCTATCTGGCT +
Preference number: 6 (lower is better)
Translates to: QTVLSWVLCLHC*LTLTLTHPYLA
Trigger: AGCCAGATAGGGGTGGGTTAGGGTCAGTGTGAGCCAACAGTGTAGACATAACACCCAACTCAGCACAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS TCA 72 bp TGCATGTTCCTTTCACTTCTTGGGGTCAGGGACCTCTaGGAGAATCTGATGAGTGGTAGTGCATCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: CMFLSLLGVRDL*ENLMSGSASSP
Trigger: AGGGGAGGATGCACTACCACTCATCAGATTCTCTCAGAGGTCCCTGACCCCAAGAAGTGAAAGGAACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582734.1
CDS GCA 72 bp TCTCCTCCTGGCAACCTATCCTTCCTTCTGCTCCACTaGCATCTACTTTGTGACACTTTCCCTAAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: SPPGNLSFLLLH*HLLCDTFPKSP
Trigger: TGGGGACTTAGGGAAAGTGTCACAAAGTAGATGGCAGTGGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580606.5
CDS GCA 72 bp AATGCCTGTCTCCTCCTGGCAACCTATCCTTCCTTCTaGTCCACTGCCATCTACTTTGTGACACTTTCCCTA +
Preference number: 6 (lower is better)
Translates to: NACLLLATYPSF*STAIYFVTLSL
Trigger: TAGGGAAAGTGTCACAAAGTAGATGGCAGTGGAGCAGAAGGAAGGATAGGTTGCCAGGAGGAGACAGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580606.5