Pregenerated sensors for C19ORF38 (Homo sapiens)
Ensembl gene IDs: ENSG00000214212Ensembl transcript IDs: ENST00000397820.5, ENST00000587494.1, ENST00000592854.5
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTaGGGGACAAGAAGGGGTCCTGACATCTCCTTCTCTGGTGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: EFHGCAETWDVLWPS*GTRRGPDISFSGGP Trigger: AGGACCACCAGAGAAGGAGATGTCAGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR CCA 90 bp | GGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATaGCCCAGCTGGGGGACAAGAAGGGGTCCTGACATCTCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GREEFHGCAETWDVL*PSWGTRRGPDISFS Trigger: AGAGAAGGAGATGTCAGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR CCA 90 bp | CAGACACACAACACACCCAAGGGCACCCTATGCTCAAAAACCCACTaGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTC | + |
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Preference number: 1 (lower is better) Translates to: QTHNTPKGTLCSKTH*GREEFHGCAETWDV Trigger: GACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTTGTGTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR-3UTR GCA 90 bp | AATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAACCTCAGGCCCCCGAATaGCTGGAGACAGAGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: NSTGVQRPGTSYGPAGGQPQAPE*LETEGS Trigger: GGACCCCTCTGTCTCCAGGCATTCGGGGGCCTGAGG...TTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR-3UTR TCA 90 bp | GGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGACAAGAAGGGGTCCTaGCATCTCCTTCTCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GEGRNSTGVQRPGTSYGPDKKGS*HLLLWW Trigger: CCACCAGAGAAGGAGATGTCAGGACCCCTTCTTGTC...TGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR CCA 72 bp | TGGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTaGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: WGREEFHGCAET*DVLWPSWGTRR Trigger: CCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR GCA 72 bp | AAAAACCCACTGGGGAAGGGAGGAATTCCACGGGTGTaGAGAGACCTGGGACGTCTTATGGCCCAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KNPLGKGGIPRV*RDLGRLMAQLG Trigger: CCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCCAGTGGGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR CCA 72 bp | GAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATaGCCCAGCTGGGGGACAAGAAGGGGTCCTGACATC | + |
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Preference number: 3 (lower is better) Translates to: EFHGCAETWDVL*PSWGTRRGPDI Trigger: GATGTCAGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| 3UTR CCA 72 bp | AACACACCCAAGGGCACCCTATGCTCAAAAACCCACTaGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACC | + |
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Preference number: 3 (lower is better) Translates to: NTPKGTLCSKTH*GREEFHGCAET Trigger: GGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGGGGGTGGAAGGGTCCCCCTaGAGCCTTGCTGCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: RVCRDLGRLMAQLGDKKGVEGSP*SLAAAA Trigger: GGCGGCAGCAGCAAGGCTCCAGGGGGACCCTTCCAC...CCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | GGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAGCTGGGAAATCCGGCTaGGGCCAGAGGGGCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GPDISFSGGPEEPKVERGAGKSG*GQRGPR Trigger: CCTTGGGCCCCTCTGGCCTCAGCCGGATTTCCCAGC...TCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | GGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGATGGTCCGTGGGGGCCTaGAGGAGCTGGACCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: GPDISFSGGPEEPKVERGWSVGA*RSWTTC Trigger: GCAGGTGGTCCAGCTCCTGCAGGCCCCCACGGACCA...TCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGTGGATGGGGTCCTCTTaGCTGCTTGGGTACGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GVLTSPSLVVLRSRRSRGWMGSS*LLGYGG Trigger: GCCCCCGTACCCAAGCAGCCAAGAGGACCCCATCCA...CCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | GGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCACGTTCACGGGCTCGCTaGGGTCTGACAGCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: GEGRNSTGVQRPGTSYGPRSRAR*GLTAGT Trigger: AGTCCCAGCTGTCAGACCTCAGCGAGCCCGTGAACG...TGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | CCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGGGGTCCTGACATCTCCTTGGGGTCCTCTTGGCTaGTTGGGTACGGGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PGTSYGPAGGQEGVLTSPWGPLG*LGTGAP Trigger: TGGTGCCCCCGTACCCAAGCAGCCAAGAGGACCCCA...AGGAGATGTCAGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | TCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTGTCCCCCTGGAGCCTTaGTGCTGCCGCCGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLVVLRSRRSRGELPVVCVPLEP*CCRRSG Trigger: ACCTGAGCGGCGGCAGCAGCAAGGCTCCAGGGGGAC...ACAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGACTCCATACTGGCAGTaGAAGGGTCCCCCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GGIPRVCRDLGRLMAQLGTPYWQ*KGPPGA Trigger: GGCTCCAGGGGGACCCTTCCACTGCCAGTATGGAGT...CCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | AATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAACAGGCGAGGAGGACGTaGAAGTGGGCCTCTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: NSTGVQRPGTSYGPAGGQQARRT*KWASSG Trigger: CCCGGAAGAGGCCCACTTCCACGTCCTCCTCGCCTG...TTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | GGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGAGTTCCCAGGGGCCATaGATGCGATGTGGATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GVLTSPSLVVLRSRRSRGSSQGP*MRCGWG Trigger: ACCCCATCCACATCGCATGCATGGCCCCTGGGAACT...CCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | TCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTCCTCAGGCCCCCGAATaGCTGGAGACAGAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLVVLRSRRSRGELPVVCPQAPE*LETEGS Trigger: GGACCCCTCTGTCTCCAGGCATTCGGGGGCCTGAGG...ACAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | ACAAGAAGGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGGGGCACCAGCCGGATaGATGGTGCTGGGATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TRRGPDISFSGGPEEPKVGAPAG*MVLGSP Trigger: TGGCGATCCCAGCACCATCCATCCGGCTGGTGCCCC...GACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCCTTCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CTCCCACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCAATGTCACCCCGCGCTaGTCCGTGGGGGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPLLCDENPKARVPLPFLNVTPR*SVGACR Trigger: CCTGCAGGCCCCCACGGACCAGCGCGGGGTGACATT...GAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGGGGCCGGGTCTTCTTCTaGCATCGTTTTCGCGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: HGCAETWDVLWPSWGTRRGRVFF*HRFRGD Trigger: GTCTCCGCGAAAACGATGCCAGAAGAAGACCCGGCC...CCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGTCTTATGGCCCAGCTaGGGGACAAGAAGGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GVLTSPSLVVLRSRRSRGVLWPS*GTRRGP Trigger: AGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGAC...CCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | ACAAGAAGGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGCAGTGGTGCCTGAGTaGTCATCCAAGGTGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TRRGPDISFSGGPEEPKVAVVPE*SSKVAG Trigger: CCCGGCCACCTTGGATGATCACTCAGGCACCACTGC...GACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCCTTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | GAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGTGGCAGTGGTGCCTaGGTGATCATCCAAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EGRNSTGVQRPGTSYGPAGGSGA*VIIQGG Trigger: GCCACCTTGGATGATCACTCAGGCACCACTGCCACC...AGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | AGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTATAGTGCCAGGCCCAAGGCCCGGAAAGTGCTaGATTCGGGGGTCTCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RSRRSRGELPVVCIVPGPRPGKC*IRGSQA Trigger: CGCCTGAGACCCCCGAATTCAGCACTTTCCGGGCCT...TGGGCCTGGCACTATACAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | GGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGACAAGAAGGGGTCCTaGCATCTCCTTCTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRNSTGVQRPGTSYGPAGDKKGS*HLLLWW Trigger: CCACCAGAGAAGGAGATGTCAGGACCCCTTCTTGTC...CCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | CCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTATAGTGCCAGGCCCATGCCTCAGCCGGATGGATGGTaGTGGGATCGCCAAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PKVERGTSCCLYSARPMPQPDGW*WDRQGA Trigger: GGCTCCTTGGCGATCCCAGCACCATCCATCCGGCTG...AGGCATGGGCCTGGCACTATACAGACAACAGGAAGTTCCCCTCTCGACCTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | GAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTAGGAGCTGGACCACCTaGCCCCCTCGATACAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EGRNSTGVQRPGTSYGPARSWTT*PPRYSV Trigger: CACACTGTATCGAGGGGGGCAGGTGGTCCAGCTCCT...AGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | GTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGGGGTCCTGGGAATTCCACGGGTGTaGAGAGACCTGGGACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VQRPGTSYGPAGGQEGVLGIPRV*RDLGRL Trigger: AAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCC...CAGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | GGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGCCCAAGGGCACCCTATaGTCAAAAACCCACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GVLTSPSLVVLRSRRSRGPKGTL*SKTHWG Trigger: TCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGG...CCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CTCCCACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCGTCCTCTTGGCTGCTTaGGTACGGGGGCACCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LPLLCDENPKARVPLPFLVLLAA*VRGHQP Trigger: CGGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGGAC...GAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAGCCATGCATGCGATGTaGATGGGGTCCTCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GPDISFSGGPEEPKVERGAMHAM*MGSSWL Trigger: CAGCCAAGAGGACCCCATCCACATCGCATGCATGGC...TCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGCCTAACACTCCATACTaGCAGTGGAAGGGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GVLTSPSLVVLRSRRSRGPNTPY*QWKGPP Trigger: AGGGGGACCCTTCCACTGCCAGTATGGAGTGTTAGG...CCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CTCCCACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCGGGTCCTGGAGTTGCTaGGGGTGGCAGTGGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LPLLCDENPKARVPLPFLGSWSC*GWQWCL Trigger: CAGGCACCACTGCCACCCCCAGCAACTCCAGGACCC...GAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAACCTGGGACGTCTTATaGCCCAGCTGGGGGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: GPDISFSGGPEEPKVERGTWDVL*PSWGTR Trigger: TCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGT...TCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | CACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGGACAGCTGGGACTGGTTaGGCTCACCTAACACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HGCAETWDVLWPSWGTRRTAGTG*AHLTLH Trigger: ATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGT...CCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTATCCCAGGGGCCATGCATaGGATGTGGATGGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SGGPEEPKVERGTSCCLYPRGHA*DVDGVL Trigger: GAGGACCCCATCCACATCGCATGCATGGCCCCTGGG...ATACAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | GAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTTGGGGGTGGCAGTGGTaGCTGAGTGATCATCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: EGRNSTGVQRPGTSYGPAWGWQW*LSDHPR Trigger: CCTTGGATGATCACTCAGGCACCACTGCCACCCCCA...AGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | TCCCACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTTCCGGGTCCTGGAGTTaGTGGGGGTGGCAGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SHSSVMKIPRPGFPFLSSSGSWS*WGWQWC Trigger: GCACCACTGCCACCCCCAGCAACTCCAGGACCCGGA...AGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | AATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAATGGAGTTGCTGGGGGTaGCAGTGGTGCCTGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: NSTGVQRPGTSYGPAGGQWSCWG*QWCLSD Trigger: ATCACTCAGGCACCACTGCCACCCCCAGCAACTCCA...TTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | AGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTATAGTGCCAGGCCCACCCCTCGATACAGTGTaGAATTCGCCCCCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RSRRSRGELPVVCIVPGPPLDTV*NSPPGS Trigger: ACTTCCCGGGGGCGAATTTCACACTGTATCGAGGGG...TGGGCCTGGCACTATACAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGTATCTTCTCTGGTGGTCCTaGGGAGCCGAAGGTCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SGGPEEPKVERGTSCCLYLLWWS*GAEGRE Trigger: CTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAG...ATACAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | TTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGAACTTCCTGTTGTCTGCTCTCTGCGTTTGGCTaGGAAATCCGGCTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSGGPEEPKVERGTSCCLLSAFG*EIRLRP Trigger: TGGCCTCAGCCGGATTTCCCAGCCAAACGCAGAGAG...CAGACAACAGGAAGTTCCCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGAAGGGGTCCTGACATCTCCTCTGCAAAGAGCAAGATaGTCCAGGGCATCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGTSYGPAGGQEGVLTSPLQRAR*SRASLS Trigger: AGAGAGAGATGCCCTGGACCATCTTGCTCTTTGCAG...AGGAGATGTCAGGACCCCTTCTTGTCCCCCAGCTGGGCCATAAGACGTCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCACTGTCGAAGTTAATCTaGGCCCAGCAGGATTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: GEGRNSTGVQRPGTSYGPLSKLI*AQQDSR Trigger: TCGAGAATCCTGCTGGGCCCAGATTAACTTCGACAG...TGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTGTCGGGTGTGCAGAGACCTaGGACGTCTTATGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSVMKIPRPGFPFLSSVGCAET*DVLWPS Trigger: GCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCC...GACAGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGAGGAATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCATGCTCAAAAACCCACTaGGGAAGGGAGGAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGRNSTGVQRPGTSYGPCSKTH*GREEFH Trigger: GTGGAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCA...TGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTGTCGATCCAAGTGGGCACTaGGAAGGAGACGTTCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSVMKIPRPGFPFLSSVDPSGH*EGDVHG Trigger: CCCGTGAACGTCTCCTTCCCAGTGCCCACTTGGATC...GACAGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR GCA 90 bp | AACACACCCAAGGGCACCCTATGCTCAAAAACCCACTGGGGAAGGGAGGAATTCCGCCAAGGAGCCAGCTaGAAAGAGCAAGATGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTPKGTLCSKTHWGREEFRQGAS*KEQDGP Trigger: TGGACCATCTTGCTCTTTGCAGCTGGCTCCTTGGCG...GAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | AACACACCCAAGGGCACCCTATGCTCAAAAACCCACTGGGGAAGGGAGGAATTCTGCATGCGATGTGGATaGGGTCCTCTTGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTPKGTLCSKTHWGREEFCMRCG*GPLGCL Trigger: CAAGCAGCCAAGAGGACCCCATCCACATCGCATGCA...GAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | CACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTGTCCTGAGGTCTGACAGCTaGGACTGGTTGAGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSVMKIPRPGFPFLSSVLRSDS*DWLSSP Trigger: AGGTGAGCTCAACCAGTCCCAGCTGTCAGACCTCAG...GACAGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | AACACACCCAAGGGCACCCTATGCTCAAAAACCCACTGGGGAAGGGAGGAATTCGCACCAAGATCCAAGTaGGCACTGGGAAGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: NTPKGTLCSKTHWGREEFAPRSK*ALGRRR Trigger: ACGTCTCCTTCCCAGTGCCCACTTGGATCTTGGTGC...GAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | AACACACCCAAGGGCACCCTATGCTCAAAAACCCACTGGGGAAGGGAGGAATTCAGTGATCATCCAAGGTaGCCGGGTCTTCTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTPKGTLCSKTHWGREEFSDHPR*PGLLLA Trigger: TGCCAGAAGAAGACCCGGCCACCTTGGATGATCACT...GAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS-3UTR CCA 90 bp | TCCCACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTTCTGACAGCTGGGACTaGTTGAGCTCACCTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSVMKIPRPGFPFLSSSDSWD*LSSPNT Trigger: AGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGA...AGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS GCA 90 bp | CAGGCGAGGAGGACGTGGAAGTGGGCCTCTTCCGGGTCCTGGAGTTaGTGGGGGTGGCAGTGGTGCCTGAGTGATCATCCAAGGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QARRTWKWASSGSWS*WGWQWCLSDHPRWP Trigger: CGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTTCCACGTCCTCCTCGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CCA 90 bp | GCGAGGAGGACGTGGAAGTGGGCCTCTTCCGGGTCCTGGAGTTGCTaGGGGTGGCAGTGGTGCCTGAGTGATCATCCAAGGTGGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARRTWKWASSGSWSC*GWQWCLSDHPRWPG Trigger: ACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTTCCACGTCCTCCTCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS-3UTR CAA 90 bp | GGGGTCCTGACATCTCCTTCTCTGGTGGTCCTGAGGAGCCGAAGGTCGAGAGGGGTGGATGGGGTCCTCTaGGCTGCTTGGGTACGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLTSPSLVVLRSRRSRGVDGVL*AAWVRG Trigger: CCCCCGTACCCAAGCAGCCAAGAGGACCCCATCCAC...CCCTCTCGACCTTCGGCTCCTCAGGACCACCAGAGAAGGAGATGTCAGGACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS CCA 90 bp | GGATGGGGTCCTCTTGGCTGCTTGGGTACGGGGGCACCAGCCGGATaGATGGTGCTGGGATCGCCAAGGAGCCAGCTGCAAAGAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GWGPLGCLGTGAPAG*MVLGSPRSQLQRAR Trigger: TCTTGCTCTTTGCAGCTGGCTCCTTGGCGATCCCAGCACCATCCATCCGGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGGACCCCATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS-3UTR CAA 90 bp | AATTCCACGGGTGTGCAGAGACCTGGGACGTCTTATGGCCCAGCTGGGGGACAAGGTCCTCTTGGCTGCTaGGGTACGGGGGCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSTGVQRPGTSYGPAGGQGPLGC*GTGAPA Trigger: GGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGGACC...TTGTCCCCCAGCTGGGCCATAAGACGTCCCAGGTCTCTGCACACCCGTGGAATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS GCA 90 bp | AAGTGGGCCTCTTCCGGGTCCTGGAGTTGCTGGGGGTGGCAGTGGTaGCTGAGTGATCATCCAAGGTGGCCGGGTCTTCTTCTGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KWASSGSWSCWGWQW*LSDHPRWPGLLLAS Trigger: CGATGCCAGAAGAAGACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CCA 90 bp | AGGTCTGACAGCTGGGACTGGTTGAGCTCACCTAACACTCCATACTaGCAGTGGAAGGGTCCCCCTGGAGCCTTGCTGCTGCCGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSDSWDWLSSPNTPY*QWKGPPGALLLPPL Trigger: GAGCGGCGGCAGCAGCAAGGCTCCAGGGGGACCCTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 90 bp | TGGAAGTGGGCCTCTTCCGGGTCCTGGAGTTGCTGGGGGTGGCAGTaGTGCCTGAGTGATCATCCAAGGTGGCCGGGTCTTCTTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WKWASSGSWSCWGWQ*CLSDHPRWPGLLLA Trigger: TGCCAGAAGAAGACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CCA 90 bp | AGGACGTGGAAGTGGGCCTCTTCCGGGTCCTGGAGTTGCTGGGGGTaGCAGTGGTGCCTGAGTGATCATCCAAGGTGGCCGGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTWKWASSGSWSCWG*QWCLSDHPRWPGLL Trigger: AAGAAGACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTTCCACGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS-3UTR CAA 90 bp | CACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTGTCGGTCCCCCTGGAGCCTaGCTGCTGCCGCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSVMKIPRPGFPFLSSVGPPGA*LLPPLR Trigger: CCTGAGCGGCGGCAGCAGCAAGGCTCCAGGGGGACC...GACAGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS TCA 90 bp | CTCTTCCGGGTCCTGGAGTTGCTGGGGGTGGCAGTGGTGCCTGAGTaGTCATCCAAGGTGGCCGGGTCTTCTTCTGGCATCGTTTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LFRVLELLGVAVVPE*SSKVAGSSSGIVFA Trigger: CGCGAAAACGATGCCAGAAGAAGACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS TCA 90 bp | GGGCCTCTTCCGGGTCCTGGAGTTGCTGGGGGTGGCAGTGGTGCCTaGGTGATCATCCAAGGTGGCCGGGTCTTCTTCTGGCATCGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPLPGPGVAGGGSGA*VIIQGGRVFFWHRF Trigger: AAAACGATGCCAGAAGAAGACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CCA 90 bp | GACAGCTGGGACTGGTTGAGCTCACCTAACACTCCATACTGGCAGTaGAAGGGTCCCCCTGGAGCCTTGCTGCTGCCGCCGCTCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: DSWDWLSSPNTPYWQ*KGPPGALLLPPLRL Trigger: TAACCTGAGCGGCGGCAGCAGCAAGGCTCCAGGGGGACCCTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 90 bp | GGGAAGGAGACGTTCACGGGCTCGCTGAGGTCTGACAGCTGGGACTaGTTGAGCTCACCTAACACTCCATACTGGCAGTGGAAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GKETFTGSLRSDSWD*LSSPNTPYWQWKGP Trigger: GGGACCCTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGACCTCAGCGAGCCCGTGAACGTCTCCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 90 bp | GGCACTGGGAAGGAGACGTTCACGGGCTCGCTGAGGTCTGACAGCTaGGACTGGTTGAGCTCACCTAACACTCCATACTGGCAGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTGKETFTGSLRSDS*DWLSSPNTPYWQWK Trigger: CTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGACCTCAGCGAGCCCGTGAACGTCTCCTTCCCAGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS-3UTR CAA 90 bp | AACACACCCAAGGGCACCCTATGCTCAAAAACCCACTGGGGAAGGGAGGAATTCTTCCGGGTCCTGGAGTaGCTGGGGGTGGCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTPKGTLCSKTHWGREEFFRVLE*LGVAVV Trigger: CACCACTGCCACCCCCAGCAACTCCAGGACCCGGAA...GAATTCCTCCCTTCCCCAGTGGGTTTTTGAGCATAGGGTGCCCTTGGGTGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS CCA 90 bp | ATGGCATTTGGAGGTGTAATCCTTTCCCCACTGGAGTCAGGAGTGTaGAGGCACAGACCTGTGCTGTCGAAGTTAATCTGGGCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MAFGGVILSPLESGV*RHRPVLSKLIWAQQ Trigger: CTGCTGGGCCCAGATTAACTTCGACAGCACAGGTCTGTGCCTCCACACTCCTGACTCCAGTGGGGAAAGGATTACACCTCCAAATGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 90 bp | GAAACTGATACGCTGATGCCTCTAAGGCGCAAAAGGCGTCGAACCTaGACCACGCTCACAGAGCAAGCAAAACACGACGCCACAGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: ETDTLMPLRRKRRRT*TTLTEQAKHDATGI Trigger: GATACCTGTGGCGTCGTGTTTTGCTTGCTCTGTGAGCGTGGTCCAGGTTCGACGCCTTTTGCGCCTTAGAGGCATCAGCGTATCAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592854.5 |
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| CDS-3UTR CAA 90 bp | CACTCCTCTGTGATGAAAATCCCAAGGCCAGGGTTCCCCTTCCTTTCCTCTGTCGACAGCTGGGACTGGTaGAGCTCACCTAACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSVMKIPRPGFPFLSSVDSWDW*SSPNTP Trigger: TGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTC...GACAGAGGAAAGGAAGGGGAACCCTGGCCTTGGGATTTTCATCACAGAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397820.5 |
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| CDS CCA 90 bp | GAGTCAGGAGTGTGGAGGCACAGACCTGTGCTGTCGAAGTTAATCTaGGCCCAGCAGGATTCTCGATCTCTTTTCTTCTGTAAATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESGVWRHRPVLSKLI*AQQDSRSLFFCKFL Trigger: CAGAAATTTACAGAAGAAAAGAGATCGAGAATCCTGCTGGGCCCAGATTAACTTCGACAGCACAGGTCTGTGCCTCCACACTCCTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 90 bp | TCACAGAAGAAATTTGATTGGTGTGTGATGAGGCCTGATGGCATTTaGAGGTGTAATCCTTTCCCCACTGGAGTCAGGAGTGTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQKKFDWCVMRPDGI*RCNPFPTGVRSVEA Trigger: TGCCTCCACACTCCTGACTCCAGTGGGGAAAGGATTACACCTCCAAATGCCATCAGGCCTCATCACACACCAATCAAATTTCTTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 90 bp | TGTTTTGACCCTAAAGGGAACAAGCAGTCACAGAAGAAATTTGATTaGTGTGTGATGAGGCCTGATGGCATTTGGAGGTGTAATCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFDPKGNKQSQKKFD*CVMRPDGIWRCNPF Trigger: GAAAGGATTACACCTCCAAATGCCATCAGGCCTCATCACACACCAATCAAATTTCTTCTGTGACTGCTTGTTCCCTTTAGGGTCAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 72 bp | CTGCTGCCGCCGCTCAGGTTAAATGTCACCCCGCGCTaGTCCGTGGGGGCCTGCAGGAGCTGGACCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPPLRLNVTPR*SVGACRSWTTC Trigger: GCAGGTGGTCCAGCTCCTGCAGGCCCCCACGGACCAGCGCGGGGTGACATTTAACCTGAGCGGCGGCAGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS GCA 72 bp | GGGCCATGCATGCGATGTGGATGGGGTCCTCTTGGCTaGTTGGGTACGGGGGCACCAGCCGGATGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPCMRCGWGPLG*LGTGAPAGWMV Trigger: CACCATCCATCCGGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGGACCCCATCCACATCGCATGCATGGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | CCTCTTGGCTGCTTGGGTACGGGGGCACCAGCCGGATaGATGGTGCTGGGATCGCCAAGGAGCCAGCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PLGCLGTGAPAG*MVLGSPRSQLQ Trigger: TTGCAGCTGGCTCCTTGGCGATCCCAGCACCATCCATCCGGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | CCGGGAAGTTCCCAGGGGCCATGCATGCGATGTGGATaGGGTCCTCTTGGCTGCTTGGGTACGGGGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSSQGPCMRCG*GPLGCLGTGAP Trigger: TGGTGCCCCCGTACCCAAGCAGCCAAGAGGACCCCATCCACATCGCATGCATGGCCCCTGGGAACTTCCCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS GCA 72 bp | GCTGCTTGGGTACGGGGGCACCAGCCGGATGGATGGTaGTGGGATCGCCAAGGAGCCAGCTGCAAAGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AAWVRGHQPDGW*WDRQGASCKEQ Trigger: TTGCTCTTTGCAGCTGGCTCCTTGGCGATCCCAGCACCATCCATCCGGCTGGTGCCCCCGTACCCAAGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | CATGCATGCGATGTGGATGGGGTCCTCTTGGCTGCTTaGGTACGGGGGCACCAGCCGGATGGATGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HACDVDGVLLAA*VRGHQPDGWCW Trigger: CCAGCACCATCCATCCGGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGGACCCCATCCACATCGCATGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | AAGTGGGCCTCTTCCGGGTCCTGGAGTTGCTGGGGGTaGCAGTGGTGCCTGAGTGATCATCCAAGGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KWASSGSWSCWG*QWCLSDHPRWP Trigger: CGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CAA 72 bp | CCATGCATGCGATGTGGATGGGGTCCTCTTGGCTGCTaGGGTACGGGGGCACCAGCCGGATGGATGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PCMRCGWGPLGC*GTGAPAGWMVL Trigger: CAGCACCATCCATCCGGCTGGTGCCCCCGTACCCAAGCAGCCAAGAGGACCCCATCCACATCGCATGCATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | GCAAGATGGTCCAGGGCATCTCTCTCTGCGTTTGGCTaGGAAATCCGGCTGAGGCCAGAGGGGCCCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARWSRASLSAFG*EIRLRPEGPKA Trigger: AGCCTTGGGCCCCTCTGGCCTCAGCCGGATTTCCCAGCCAAACGCAGAGAGAGATGCCCTGGACCATCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CCA 72 bp | GACTGGTTGAGCTCACCTAACACTCCATACTGGCAGTaGAAGGGTCCCCCTGGAGCCTTGCTGCTGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DWLSSPNTPYWQ*KGPPGALLLPP Trigger: CGGCGGCAGCAGCAAGGCTCCAGGGGGACCCTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | ACGTGGAAGTGGGCCTCTTCCGGGTCCTGGAGTTGCTaGGGGTGGCAGTGGTGCCTGAGTGATCATCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TWKWASSGSWSC*GWQWCLSDHPR Trigger: CCTTGGATGATCACTCAGGCACCACTGCCACCCCCAGCAACTCCAGGACCCGGAAGAGGCCCACTTCCACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CCA 72 bp | AGCTGGGACTGGTTGAGCTCACCTAACACTCCATACTaGCAGTGGAAGGGTCCCCCTGGAGCCTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWDWLSSPNTPY*QWKGPPGALLL Trigger: CAGCAGCAAGGCTCCAGGGGGACCCTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | TGGGGGTGGCAGTGGTGCCTGAGTGATCATCCAAGGTaGCCGGGTCTTCTTCTGGCATCGTTTTCGCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WGWQWCLSDHPR*PGLLLASFSRR Trigger: TCTCCGCGAAAACGATGCCAGAAGAAGACCCGGCCACCTTGGATGATCACTCAGGCACCACTGCCACCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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| CDS CAA 90 bp | AAGGAGACGTTCACGGGCTCGCTGAGGTCTGACAGCTGGGACTGGTaGAGCTCACCTAACACTCCATACTGGCAGTGGAAGGGTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KETFTGSLRSDSWDW*SSPNTPYWQWKGPP Trigger: AGGGGGACCCTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGACCTCAGCGAGCCCGTGAACGTCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | ACGTTCACGGGCTCGCTGAGGTCTGACAGCTGGGACTaGTTGAGCTCACCTAACACTCCATACTGGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TFTGSLRSDSWD*LSSPNTPYWQW Trigger: CCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGACCTCAGCGAGCCCGTGAACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | ACGCTGATGCCTCTAAGGCGCAAAAGGCGTCGAACCTaGACCACGCTCACAGAGCAAGCAAAACACGACGCC | + |
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Preference number: 6 (lower is better) Translates to: TLMPLRRKRRRT*TTLTEQAKHDA Trigger: GGCGTCGTGTTTTGCTTGCTCTGTGAGCGTGGTCCAGGTTCGACGCCTTTTGCGCCTTAGAGGCATCAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592854.5 |
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| CDS CAA 72 bp | TTCACGGGCTCGCTGAGGTCTGACAGCTGGGACTGGTaGAGCTCACCTAACACTCCATACTGGCAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FTGSLRSDSWDW*SSPNTPYWQWK Trigger: CTTCCACTGCCAGTATGGAGTGTTAGGTGAGCTCAACCAGTCCCAGCTGTCAGACCTCAGCGAGCCCGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397820.5 ENST00000587494.1 ENST00000592854.5 |
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| CDS CCA 72 bp | GGAGGTGTAATCCTTTCCCCACTGGAGTCAGGAGTGTaGAGGCACAGACCTGTGCTGTCGAAGTTAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: GGVILSPLESGV*RHRPVLSKLIW Trigger: CCAGATTAACTTCGACAGCACAGGTCTGTGCCTCCACACTCCTGACTCCAGTGGGGAAAGGATTACACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 72 bp | GTGTGGAGGCACAGACCTGTGCTGTCGAAGTTAATCTaGGCCCAGCAGGATTCTCGATCTCTTTTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VWRHRPVLSKLI*AQQDSRSLFFC Trigger: ACAGAAGAAAAGAGATCGAGAATCCTGCTGGGCCCAGATTAACTTCGACAGCACAGGTCTGTGCCTCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 72 bp | AAATTTGATTGGTGTGTGATGAGGCCTGATGGCATTTaGAGGTGTAATCCTTTCCCCACTGGAGTCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KFDWCVMRPDGI*RCNPFPTGVRS Trigger: ACTCCTGACTCCAGTGGGGAAAGGATTACACCTCCAAATGCCATCAGGCCTCATCACACACCAATCAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587494.1 |
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| CDS CCA 72 bp | TTATCGAAGGACATGTCTGTGCTGTCGAAGTTAATCTaGGCCCAGCAGGATTCTCGATCTCTTTTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSKDMSVLSKLI*AQQDSRSLFFC Trigger: ACAGAAGAAAAGAGATCGAGAATCCTGCTGGGCCCAGATTAACTTCGACAGCACAGACATGTCCTTCGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397820.5 ENST00000592854.5 |
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