RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C19ORF25 (Homo sapiens)

Ensembl gene IDs: ENSG00000119559

Ensembl transcript IDs: ENST00000427685.2, ENST00000436106.3, ENST00000585675.6, ENST00000586564.5, ENST00000588427.5, ENST00000588849.1, ENST00000588871.5, ENST00000589421.1, ENST00000590621.1, ENST00000591027.2, ENST00000592486.1, ENST00000592605.1, ENST00000592872.5, ENST00000651077.1

Found 856 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGC +
Preference number: 1 (lower is better)
Translates to: PRRLAAGAHTSASAR*PPAAAAGWQPRRPG
Trigger: GCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR GCA 90 bp TCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: SRSRSSPARCRSSHL*LSTLPACCSRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR GCA 90 bp CCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAAGCCTaGAGGCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: PGKAWVQATLCAAQA*RPREVSLRRQPRLP
Trigger: CGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR TCA 90 bp CTCTGGGTCAGGCGGACGGTCCCTGCATGCAGTGCCCGGCAGGACTaGGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCTCCCCAGCTT +
Preference number: 1 (lower is better)
Translates to: LWVRRTVPACSARQD*AGFPGSPVPIPPQL
Trigger: AAGCTGGGGAGGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCATGCAGGGACCGTCCGCCTGACCCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CCA 90 bp CCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCTTCATCTaGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGC +
Preference number: 1 (lower is better)
Translates to: PEEAASAAGNAACFI*ATSRSRSSPARCRS
Trigger: GCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR GCA 90 bp AGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGC +
Preference number: 1 (lower is better)
Translates to: RGQPEEAASAAGNAA*FIWATSRSRSSPAR
Trigger: GCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR CCA 90 bp CACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTaGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCG +
Preference number: 1 (lower is better)
Translates to: HTSASARCPPAAAAG*QPRRPGFAGRAALP
Trigger: CGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR TCA 90 bp GGCAGGGTGGCTATGAGACTCAGGACACCCTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAGCAAGGGCAGTGGCTGGGAGACACC +
Preference number: 1 (lower is better)
Translates to: GRVAMRLRTPWAPGQ*LTAVLQQGQWLGDT
Trigger: GGTGTCTCCCAGCCACTGCCCTTGCTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR CCA 90 bp TGCAGCTGGCAGGGTGGCTATGAGACTCAGGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGTCCTCCAGCAAGGGCAGTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: CSWQGGYETQDTLGS*PVTHSGPPARAVAG
Trigger: CCCAGCCACTGCCCTTGCTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR TCA 90 bp TCAGGGCTGCTTCTCTTGGGTGACCCCAGCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTGGGAGGAGCCCGGGGCCCAGAAGGA +
Preference number: 1 (lower is better)
Translates to: SGLLLLGDPSGPGSL*RSTWLVGGARGPEG
Trigger: TCCTTCTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTCACAACGACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR TCA 90 bp CGGGACCTCCCTCGGCCAGGTGAGCAGCTTCAGAAGCATGACCAGTaGGAAGTCCCTAGGGCCCAGGCCGGGCTAGCCAAGTCCCAGTTT +
Preference number: 1 (lower is better)
Translates to: RDLPRPGEQLQKHDQ*EVPRAQAGLAKSQF
Trigger: AAACTGGGACTTGGCTAGCCCGGCCTGGGCCCTAGGGACTTCTCACTGGTCATGCTTCTGAAGCTGCTCACCTGGCCGAGGGAGGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR TCA 90 bp GCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTaGACAGCTCACTGCTTAGCGGGTGGTCCAGCCTCAGACCGGCTG +
Preference number: 1 (lower is better)
Translates to: AGGSGRALRLGRKSS*TAHCLAGGPASDRL
Trigger: CAGCCGGTCTGAGGCTGGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR GCA 90 bp ACCCGGTGGGCGGCAGGGATGCTTCTTCAGTCACTGGAAGGAGACTaGTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAG +
Preference number: 1 (lower is better)
Translates to: TRWAAGMLLQSLEGD*WRQRASSPTWEEIK
Trigger: CTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGCCGCCCACCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR CCA 90 bp CGGTGGGCGGCAGGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTaGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTG +
Preference number: 1 (lower is better)
Translates to: RWAAGMLLQSLEGDC*RQRASSPTWEEIKL
Trigger: CAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGCCGCCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR CCA 90 bp TCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTaGGAGGAAATCAAGTTGAACAGCTCACTGCTTAGCGGGTGGTCC +
Preference number: 1 (lower is better)
Translates to: SLEGDCWRQRASSPT*EEIKLNSSLLSGWS
Trigger: GGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR GCA 90 bp ACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAA +
Preference number: 1 (lower is better)
Translates to: TEAPFRRPDTHESFM*RAQPLGRLAQVSTQ
Trigger: TTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CCA 90 bp GGCATTGACGTCCTGGTGACTCCCACATTCAGCAGAAACTACGTATaGCTCCCTGCTCCCCCACGTATGCAAGCCCAGTGCAGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: GIDVLVTPTFSRNYV*LPAPPRMQAQCSRA
Trigger: AGCCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACCAGGACGTCAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR CCA 90 bp CCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTAGCGGGTaGTCCAGCCTCAGACCGGCTGGGGCTCACTCCTCATGTCACTGC +
Preference number: 1 (lower is better)
Translates to: PTWEEIKLNSSLLSG*SSLRPAGAHSSCHC
Trigger: GCAGTGACATGAGGAGTGAGCCCCAGCCGGTCTGAGGCTGGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR TCA 90 bp TCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACCCTCCGCCGCACTAACGCCCCCTCC +
Preference number: 1 (lower is better)
Translates to: SGPPCPGFHSSCYLG*KAFGKTLRRTNAPS
Trigger: GGAGGGGGCGTTAGTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR CCA 90 bp GACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTaGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATG +
Preference number: 1 (lower is better)
Translates to: DGQTHTKALCAGPSL*AALPRFPLKLLFRM
Trigger: CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CCA 90 bp CTCTTGCATTGCCTGCCGCCATCACCTCTTCCTCAAAATGGGCTGTaGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGAATTGC +
Preference number: 1 (lower is better)
Translates to: LLHCLPPSPLPQNGL*AGRFIAVYVLPQNC
Trigger: GCAATTCTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGGAAGAGGTGATGGCGGCAGGCAATGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 2 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 2 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCACTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACATGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR TCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 2 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCCTGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: GWQPRRPGFAGRAALPGPGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...AGGCCCCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 2 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 2 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp GCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCACAGCAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: ARSLPLVPREGRLQGVHSSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...GCTGTGCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR CAA 90 bp GCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCCCGGGGCCTCCGCATCCTCCATCAT +
Preference number: 2 (lower is better)
Translates to: ARLLQPLVGSHVGPA*LVELLSRGLRILHH
Trigger: ATGATGGAGGATGCGGAGGCCCCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR TCA 90 bp GACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAGCATGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: DRGCGSWDGPTSKPLQGAWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...TGCTCCCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR TCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCCTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 2 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp CTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCCTGCAGTCCCCGAGTaGGCTTGCCAGCCGGGGTCT +
Preference number: 2 (lower is better)
Translates to: LTPLPQHVARLLQPLVGSPAVPE*ACQPGS
Trigger: AGACCCCGGCTGGCAAGCTCACTCGGGGACTGCAGG...GCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LPLQVLAGSLQELTPLPQVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: APRGQPEEAASAAGNAACLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCACCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 2 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR CCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 2 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR CCA 90 bp TCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 2 (lower is better)
Translates to: SRSRSSPARCRSSHLCLSPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...GCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp AGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: SQWWTGAAGAGTAPRQSHAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...GTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCCTGCAGTCCCCGAGTaGGCTTGCCAGCCGGGGTCT +
Preference number: 2 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVPAVPE*ACQPGS
Trigger: AGACCCCGGCTGGCAAGCTCACTCGGGGACTGCAGG...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp CCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PLVGSHVGPALLVELLSRVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp AGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 2 (lower is better)
Translates to: SQWWTGAAGAGTAPRQSHEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...GTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGCAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GSHSSHYRGESMVDRGCGGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp GACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAGCAGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: DRGCGSWDGPTSKPLQGAGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...TGCTCCCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFRGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: QWWTGAAGAGTAPRQSHFAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...GAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGGCACCCCTCACTACTaGCCCCAAAGGGCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLGTPHY*PQRAGF
Trigger: GAACCCTGCCCTTTGGGGGCAGTAGTGAGGGGTGCC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 2 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 2 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 2 (lower is better)
Translates to: RRTNAPSPRARTRREAGPRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: ESQWWTGAAGAGTAPRQSWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...GCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp GCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCACAGCCAGAAGCATGACCAGTaGGAAGTCCCTAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: ARSLPLVPREGRLQGVHSQKHDQ*EVPRAQ
Trigger: CTGGGCCCTAGGGACTTCTCACTGGTCATGCTTCTG...GCTGTGCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 2 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: QWWTGAAGAGTAPRQSHFELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...GAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 2 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 2 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGCGCCGTGGCTCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: QSLEGDCWRQRASSPTWEAPWLT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGAGCCACGGCGC...CTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: GPRAALTLGGHSLDGITVGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: ESQWWTGAAGAGTAPRQSQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...GCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR GCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: PRGPTAEHGHCELTTESQLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp GGCAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 2 (lower is better)
Translates to: GSHSSHYRGESMVDRGCGASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...CCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCACACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp GAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 2 (lower is better)
Translates to: ESQWWTGAAGAGTAPRQSDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...GCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 2 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GGCAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: GSHSSHYRGESMVDRGCGGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...CCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR GCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: PRGPTAEHGHCELTTESQQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: PRGPTAEHGHCELTTESQKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGATGGTGGACAGGGGCTaGGGGAGCTGGGACGGCCCC +
Preference number: 2 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVMVDRG*GSWDGP
Trigger: GGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCAT...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGAAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 2 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: PRGPTAEHGHCELTTESQTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 2 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 2 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: GPRAALTLGGHSLDGITVLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GPRAALTLGGHSLDGITVGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTTCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 2 (lower is better)
Translates to: GPRAALTLGGHSLDGITVSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 2 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 2 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 2 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR GCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGAAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp GTAGAGCTGCTCTCCCGGGGCCTCCGCATCCTCCATCATCCTGAAGGGAACTGGAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: VELLSRGLRILHHPEGNWNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...CCAGTTCCCTTCAGGATGATGGAGGATGCGGAGGCCCCGGGAGAGCAGCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 2 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGCCCCACCTTCCACCCTaGGACACTGCCGGGACCTCC +
Preference number: 2 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQPHLPP*DTAGTS
Trigger: GGAGGTCCCGGCAGTGTCCCAGGGTGGAAGGTGGGG...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CAA 90 bp GAAGTGGGGTCAGGGGCTCAGGCTGGCCCTCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATC +
Preference number: 2 (lower is better)
Translates to: EVGSGAQAGPRAALT*GGHSLDGITVNTSI
Trigger: GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCCTGAGCCCCTGACCCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 2 (lower is better)
Translates to: PRGPTAEHGHCELTTESQRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCAGGAGCTGTGGCTGGTaGAACAGCTGGGATGGGGCA +
Preference number: 2 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGRSCGW*NSWDGA
Trigger: TGCCCCATCCCAGCTGTTGCACCAGCCACAGCTCCT...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GPRAALTLGGHSLDGITVTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 2 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCAGGGGCCGTGCAACCTCCGCATTGACGTCCTGGTaGCTCCCACATTCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: QRRNKPATENLSRGRATSALTSW*LPHSAE
Trigger: TTCTGCTGAATGTGGGAGTCACCAGGACGTCAATGC...GGAGGTTGCACGGCCCCTGGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGATGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 2 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 2 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CCA 90 bp CGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCAGCCTCAGACCGGCTaGGGCTCACTCCTCATGTCA +
Preference number: 2 (lower is better)
Translates to: RQRASSPTWEEIKLNSSLQPQTG*GSLLMS
Trigger: TGACATGAGGAGTGAGCCCCAGCCGGTCTGAGGCTG...CAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR TCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: AEHGHCELTTESQYSNNVWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 2 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: AEHGHCELTTESQYSNNVGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 2 (lower is better)
Translates to: SDGQTHTKALCAGPSLWATATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 2 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAACTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 2 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 2 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTCTAGGAGGCGGAGGTTaGGCCACTGCATTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: QRASSPTWEEIKLNSSLLLGGGG*ATAFQP
Trigger: AGGCTGGAATGCAGTGGCGCAACCTCCGCCTCCTAG...AAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGGCACCCCTCACTACTaGCCCCAAAGGGCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIGTPHY*PQRAGF
Trigger: GAACCCTGCCCTTTGGGGGCAGTAGTGAGGGGTGCC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: TAEHGHCELTTESQYSNNTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AEHGHCELTTESQYSNNVDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCAAACAAAGCTGGCTGTaGGTCTGGAGAGAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGKQSWL*VWREGE
Trigger: CTCACCCTCTCTCCAGACCCACAGCCAGCTTTGTTT...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR TCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 2 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: TAEHGHCELTTESQYSNNVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR GCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCAACACAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: HWVGTRWMESQLTPRSQHNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...GTGTTGGGATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: ALTLGGHSLDGITVNTSITWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 2 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 2 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp CTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTCACTCCTCATGTCACTaGTCTTTGAAAGCAAATGTG +
Preference number: 2 (lower is better)
Translates to: LLQSLEGDCWRQRASSPTHSSCH*SLKANV
Trigger: CACATTTGCTTTCAAAGAGCAGTGACATGAGGAGTG...AGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATAAGGGCAGGGTTCCCTaGAGTCCCCGAGTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: TAEHGHCELTTESQYSNNKGRVP*SPRVSL
Trigger: CAAGCTCACTCGGGGACTGCAGGGAACCCTGCCCTT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR TCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 2 (lower is better)
Translates to: ALTLGGHSLDGITVNTSITATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 2 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATACACAGCAGCATCACTaGCTGCTGACCACCCCATCC +
Preference number: 2 (lower is better)
Translates to: TAEHGHCELTTESQYSNNTQQHH*LLTTPS
Trigger: GGATGGGGTGGTCAGCAGGCAGTGATGCTGCTGTGT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
3UTR-3UTR CCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAACTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 2 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 2 (lower is better)
Translates to: AEHGHCELTTESQYSNNVLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 2 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CAA 90 bp ACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTT +
Preference number: 2 (lower is better)
Translates to: THTKALCAGPSLWAA*PRFPLKLLFRMKSL
Trigger: AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
3UTR-3UTR TCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 2 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp TCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTAGCGGGTGGTCCCATGTCACTGCTCTTTaGAAGCAAATGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SPTWEEIKLNSSLLSGWSHVTAL*KQMWAG
Trigger: CCCAGCCCACATTTGCTTTCAAAGAGCAGTGACATG...GGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR TCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 2 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR TCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 2 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CAA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR TCA 72 bp AGGCGGACGGTCCCTGCATGCAGTGCCCGGCAGGACTaGGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCT +
Preference number: 3 (lower is better)
Translates to: RRTVPACSARQD*AGFPGSPVPIP
Trigger: AGGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCATGCAGGGACCGTCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR GCA 72 bp AGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGG +
Preference number: 3 (lower is better)
Translates to: RSSPARCRSSHL*LSTLPACCSRW
Trigger: CCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CAA 90 bp CACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: HLCLSTLPACCSRWLAATWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...CGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CAA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CAA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: QPQQPLPGRVNGGQGLREWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR CAA 90 bp GACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAGCAGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: DRGCGSWDGPTSKPLQGAEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...TGCTCCCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR GCA 72 bp CTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGT +
Preference number: 3 (lower is better)
Translates to: LAAGAHTSASAR*PPAAAAGWQPR
Trigger: ACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR GCA 72 bp CCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCCCGCTCCAGGTCCTCG +
Preference number: 3 (lower is better)
Translates to: PEEAASAAGNAA*FIWATSRSRSS
Trigger: CGAGGACCTGGAGCGGGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR CCA 72 bp GCACCCGGTGGGCGGCAGGGATGCTTCTTCAGTCACTaGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTC +
Preference number: 3 (lower is better)
Translates to: APGGRQGCFFSH*KETAGGSGRAL
Trigger: GAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGCCGCCCACCGGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR CCA 72 bp GCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTaGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCT +
Preference number: 3 (lower is better)
Translates to: ASARCPPAAAAG*QPRRPGFAGRA
Trigger: AGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR-3UTR CAA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: QPQQPLPGRVNGGQGLREEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp GGCAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 3 (lower is better)
Translates to: GSHSSHYRGESMVDRGCGSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...CCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
3UTR-3UTR CAA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 3 (lower is better)
Translates to: QPQQPLPGRVNGGQGLRESLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR TCA 72 bp CTTCTCTTGGGTGACCCCAGCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTGGGAGGAGCCCGGGGC +
Preference number: 3 (lower is better)
Translates to: LLLGDPSGPGSL*RSTWLVGGARG
Trigger: GCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTCACAACGACCCTGGGCCGCTGGGGTCACCCAAGAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR GCA 72 bp GCGGCAGGGATGCTTCTTCAGTCACTGGAAGGAGACTaGTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAG +
Preference number: 3 (lower is better)
Translates to: AAGMLLQSLEGD*WRQRASSPTWE
Trigger: CTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR CAA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CAA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: PRGPTAEHGHCELTTESQHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
3UTR TCA 72 bp GCTATGAGACTCAGGACACCCTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAGCAAGGGCAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: AMRLRTPWAPGQ*LTAVLQQGQWL
Trigger: CAGCCACTGCCCTTGCTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTCCTGAGTCTCATAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR TCA 72 bp CCTCGGCCAGGTGAGCAGCTTCAGAAGCATGACCAGTaGGAAGTCCCTAGGGCCCAGGCCGGGCTAGCCAAG +
Preference number: 3 (lower is better)
Translates to: PRPGEQLQKHDQ*EVPRAQAGLAK
Trigger: CTTGGCTAGCCCGGCCTGGGCCCTAGGGACTTCTCACTGGTCATGCTTCTGAAGCTGCTCACCTGGCCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CCA 72 bp CAGGGTGGCTATGAGACTCAGGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGTCCTCCAGCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: QGGYETQDTLGS*PVTHSGPPARA
Trigger: TGCCCTTGCTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTCCTGAGTCTCATAGCCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CAA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CAA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: GPRAALTLGGHSLDGITVRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR CCA 72 bp GCAGGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTaGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: AGMLLQSLEGDC*RQRASSPTWEE
Trigger: TTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR CAA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR TCA 72 bp TGCTCCCCCACGTATGCAAGCCCAGTGCAGCAGGGCTaGAGCAGCACCGACTTCAGGGTCACTCAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: CSPTYASPVQQG*SSTDFRVTQRS
Trigger: GCTTCTCTGAGTGACCCTGAAGTCGGTGCTGCTTCAGCCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR GCA 72 bp AGCCTCAGACCGGCTGGGGCTCACTCCTCATGTCACTaGTCTTTGAAAGCAAATGTGGGCTGGGCGCCGTGG +
Preference number: 3 (lower is better)
Translates to: SLRPAGAHSSCH*SLKANVGWAPW
Trigger: CCACGGCGCCCAGCCCACATTTGCTTTCAAAGAGCAGTGACATGAGGAGTGAGCCCCAGCCGGTCTGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR CAA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp TGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGGCAGGAGAATCACTaGAACCTAGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: WKETAGGSGRALRLGRKSRQENH*NLGGGG
Trigger: ACCTCCGCCTCCTAGGTTCAAGTGATTCTCCTGCCT...TGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR GCA 72 bp GACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTaGTCCCCCACGTATGCAAGCCCAGTGCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: DSHIQQKLRMAP*SPTYASPVQQG
Trigger: GCCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR CCA 72 bp GGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTaGGAGGAAATCAAGTTGAACAGCTCACTGCTTAGC +
Preference number: 3 (lower is better)
Translates to: GDCWRQRASSPT*EEIKLNSSLLS
Trigger: GCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR CAA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: AEHGHCELTTESQYSNNVWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR-3UTR CAA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 3 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR-3UTR CAA 90 bp TCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTAGCGGGTGGTCCGGCGCCGTGGCTCACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: SPTWEEIKLNSSLLSGWSGAVAH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGAGCCACGGCGCC...GGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR CCA 72 bp TGCCTGCCGCCATCACCTCTTCCTCAAAATGGGCTGTaGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: CLPPSPLPQNGL*AGRFIAVYVLP
Trigger: TGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGGAAGAGGTGATGGCGGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CCA 72 bp GTCCTGGTGACTCCCACATTCAGCAGAAACTACGTATaGCTCCCTGCTCCCCCACGTATGCAAGCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: VLVTPTFSRNYV*LPAPPRMQAQC
Trigger: GCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR CCA 72 bp GAGGAAATCAAGTTGAACAGCTCACTGCTTAGCGGGTaGTCCAGCCTCAGACCGGCTGGGGCTCACTCCTCA +
Preference number: 3 (lower is better)
Translates to: EEIKLNSSLLSG*SSLRPAGAHSS
Trigger: TGAGGAGTGAGCCCCAGCCGGTCTGAGGCTGGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
3UTR-3UTR CAA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 3 (lower is better)
Translates to: AEHGHCELTTESQYSNNVRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR TCA 72 bp CCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTaGCGACAGAATCACAGTACAGCAATAATGTCCCTA +
Preference number: 3 (lower is better)
Translates to: PGAPLQSTATVS*RQNHSTAIMSL
Trigger: TAGGGACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
3UTR TCA 72 bp GGTGGCGAAGGTGAGAGGTGGGCATTGACGTCCTGGTaGCTCCCACATTCAGCAGAAACTACGTATGGCTCC +
Preference number: 3 (lower is better)
Translates to: GGEGERWALTSW*LPHSAETTYGS
Trigger: GGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACCAGGACGTCAATGCCCACCTCTCACCTTCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR TCA 72 bp CCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACCCTCCGCCGCACTAAC +
Preference number: 3 (lower is better)
Translates to: PCPGFHSSCYLG*KAFGKTLRRTN
Trigger: GTTAGTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
3UTR GCA 72 bp TCGCACACATTTAATAAACTGAGCTCTTGCATTGCCTaGCGCCATCACCTCTTCCTCAAAATGGGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: SHTFNKLSSCIA*RHHLFLKMGCG
Trigger: CCCACAGCCCATTTTGAGGAAGAGGTGATGGCGGCAGGCAATGCAAGAGCTCAGTTTATTAAATGTGTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTAGTGCCCGGCAGGACTaGGCAGGGTTCCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGSARQD*AGFPGS
Trigger: CGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACT...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGATGGTGGACAGGGGCTaGGGGAGCTGGGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSFRGPGTEPLTEAPFRRMVDRG*GSWDGP
Trigger: GGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCAT...CCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGGGGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGGLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACCC...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS-3UTR CCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCGGCACCCCACCCAGATaGGCCGGGGAGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCGTPPR*AGEALA
Trigger: AGCCAGTGCCTCCCCGGCCCATCTGGGTGGGGTGCC...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp TCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: SGPPPAPGPRRLAAGAHTALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...GGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCTCCGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QCPAGLSRVPGVAGTHPSAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...GGAGGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCATGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAAGTGCCCGGCAGGACTaGGCAGGGTTCCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTSARQD*AGFPGS
Trigger: CGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACT...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTCCTGCAGTCCCCGAGTaGGCTTGCCAGCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPPPAPGPRRLAAGAHTSPAVPE*ACQPGS
Trigger: AGACCCCGGCTGGCAAGCTCACTCGGGGACTGCAGG...AGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCATCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRSRSSPARCRSSHLCLSGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...GCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCTCGGGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PSFRGPGTEPLTEAPFRRLGLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACCCGAG...CCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS-3UTR CCA 90 bp GACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAGCAGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DRGCGSWDGPTSKPLQGAGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...TGCTCCCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFRGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: TSASARCPPAAAAGWQPRGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...ACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGGGCCGGGGAGGCACTaGCTGAGGCCAGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSGPGRH*LRPGVS
Trigger: GGAGACTCCTGGCCTCAGCCAGTGCCTCCCCGGCCC...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGGCACCCCACCCAGATaGGCCGGGGAGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPGTPPR*AGEALA
Trigger: AGCCAGTGCCTCCCCGGCCCATCTGGGTGGGGTGCC...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR TCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGPGPGW*TLDPLP
Trigger: CGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGG...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPRRLAAGAHTSASARCPAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...CGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR TCA 90 bp ATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCCTGCAGTCCCCGAGTaGGCTTGCCAGCCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IWATSRSRSSPARCRSSHPAVPE*ACQPGS
Trigger: AGACCCCGGCTGGCAAGCTCACTCGGGGACTGCAGG...GTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCATCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RCRSSHLCLSTLPACCSREGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...GCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp TCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: SRSRSSPARCRSSHLCLSEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...GCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPPPAPGPRRLAAGAHTSGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...AGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp TCATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSGPPPAPGPRRLAAGAHAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...GTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCACAGCGGTCCCTGCATGCAGTaGCCGGCAGGACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARSLPLVPREGRLQGVHSGPCMQ*PAGLSR
Trigger: CCTGCTCAGTCCTGCCGGGCACTGCATGCAGGGACC...GCTGTGCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCCAGGCGGACGGTCCCTaGATGCAGTGCCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPQADGP*MQCPAG
Trigger: TCCTGCCGGGCACTGCATGCAGGGACCGTCCGCCTG...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLREGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAGGGGTTCCCAGGGCGTaGGGTCAGGAGTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPGVPRA*GQELGV
Trigger: CACCCCTAACTCCTGACCCCACGCCCTGGGAACCCC...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR CCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGPPPAPGPRRLAAGAHTELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...GGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: PSFRGPGTEPLTEAPFRRLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...CCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGCAGCCCCAGGTCTCTaGGTCAGGCGGACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLAAPGL*VRRTVP
Trigger: AGGGACCGTCCGCCTGACCCAGAGACCTGGGGCTGC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGTGCAACAGCTGGGATaGGGCAGCCACAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQVQQLG*GSHSSH
Trigger: GTGGCTGCTGTGGCTGCCCCATCCCAGCTGTTGCAC...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPPGPGW*TLDPLP
Trigger: CGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGG...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp ACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: TSASARCPPAAAAGWQPRWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...ACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: GSLQELTPLPQHVARLLQALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...CTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGCTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CCCAGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGGTCCCAGTTTCTGGATaGGGCGCCTCCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSFRGPGTEPLTEAPFRRVPVSG*GASQAV
Trigger: CACAGCCTGGGAGGCGCCTCATCCAGAAACTGGGAC...CCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACATCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCTCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGTCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLREGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IWATSRSRSSPARCRSSHVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...GTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HVARLLQPLVGSHVGPALVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTCGCCCTTGCCCGGGCTaGTCCTCCCGCCCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRRPCPG*SSRPAN
Trigger: GTTCGCTGGGCGGGAGGAGCAGCCCGGGCAAGGGCG...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436106.3
CDS-3UTR GCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAGGTCCCTGCATGCAGTaGCCGGCAGGACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTGPCMQ*PAGLSR
Trigger: CCTGCTCAGTCCTGCCGGGCACTGCATGCAGGGACC...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAATGGTGGACAGGGGCTaGGGGAGCTGGGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGMVDRG*GSWDGP
Trigger: GGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCAT...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGGCACCCCTCACTACTaGCCCCAAAGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GPPPAPGPRRLAAGAHTSGTPHY*PQRAGF
Trigger: GAACCCTGCCCTTTGGGGGCAGTAGTGAGGGGTGCC...AGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGCTTGGAGCCCATCTCTaGGCGCGGGACCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVLGAHL*ARDPKA
Trigger: GGCTTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAG...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000651077.1
CDS-3UTR CCA 90 bp CTCACTACTGCCCCCAAAGGGCAGGGTTCCCTGCAGTCCCCGAGTGAGCTTGCCGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTTAPKGQGSLQSPSELAGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...GGCAAGCTCACTCGGGGACTGCAGGGAACCCTGCCCTTTGGGGGCAGTAGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCTTCAGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: REVSLRRQPRLPVMLPASGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...TGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LEGDCWRQRASSPTWEEIGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...GATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp CACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HVARLLQPLVGSHVGPALPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...CAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPLQVLAGSLQELTPLPQDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: IWATSRSRSSPARCRSSHSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...GTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp TCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SGPPPAPGPRRLAAGAHTDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...GGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCATCCTGAAGGGAACTaGGGGGTCTTCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGHPEGN*GVFRGQ
Trigger: CTGGCCCCGGAAGACCCCCCAGTTCCCTTCAGGATG...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGCTCCCAGGCTGTGTGTaGCAGGCCCCCTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQLPGCV*QAPFLQ
Trigger: CTGAAGAAAGGGGGCCTGCCACACACAGCCTGGGAG...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTGTGCAACAGCTGGGATaGGGCAGCCACAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGVQQLG*GSHSSH
Trigger: GTGGCTGCTGTGGCTGCCCCATCCCAGCTGTTGCAC...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGGGGCACAGGGTTTGTaGGCACCCCACCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLGAQGL*APHPDG
Trigger: CCCATCTGGGTGGGGTGCCCACAAACCCTGTGCCCC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CAA 72 bp CTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCCCGGGGCCTCCGCATC +
Preference number: 4 (lower is better)
Translates to: LQPLVGSHVGPA*LVELLSRGLRI
Trigger: GATGCGGAGGCCCCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: AAAGWQPRRPGFAGRAALALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...GAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp AGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSHLCLSTLPACCSRWLAAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GGCAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSHSSHYRGESMVDRGCGWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...CCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCCGAGAGGTCAGCCTaGGGAGGCAGCCTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKPERSA*GGSLGL
Trigger: CAACCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGG...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGCAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQQHALL*LGAHLW
Trigger: CCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588871.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: HVARLLQPLVGSHVGPALEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...CAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSHLCLSTLPACCSRWLATLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: APGPRRLAAGAHTSASARSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...ACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp TTCATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCAAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FIWATSRSRSSPARCRSSSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...TGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp TTCATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCATCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FIWATSRSRSSPARCRSSSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...TGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFRVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLAGSLQELTPLPQHVARQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...GCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HLCLSTLPACCSRWLAATKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...CGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: APRGQPEEAASAAGNAACKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLVGSHVGPALLVELLSRGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp AGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SQWWTGAAGAGTAPRQSHAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...GTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCAGGCGGACGGTCCCTaGATGCAGTGCCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVQADGP*MQCPAG
Trigger: TCCTGCCGGGCACTGCATGCAGGGACCGTCCGCCTG...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGTCCACCCTGGGACACTaGCGGGACCTCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVSTLGH*RDLPRP
Trigger: TGGCCGAGGGAGGTCCCGGCAGTGTCCCAGGGTGGA...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCACAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPQHALL*LGAHLP
Trigger: TGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586564.5
CDS-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCCGCGCTTCTTTGCCTTaGAGCCCATCTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLRASLP*SPSLGA
Trigger: CGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588871.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PLVGSHVGPALLVELLSRPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...CCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCACAGCAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: ARSLPLVPREGRLQGVHSNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...GCTGTGCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GPRRLAAGAHTSASARCPTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...CGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSLQELTPLPQHVARLLQDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCCATCCTGAAGGGAACTaGGGGGTCTTCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLHPEGN*GVFRGQ
Trigger: CTGGCCCCGGAAGACCCCCCAGTTCCCTTCAGGATG...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
CDS-3UTR CCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCATCCTGAAGGGAACTaGGGGGTCTTCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPHPEGN*GVFRGQ
Trigger: CTGGCCCCGGAAGACCCCCCAGTTCCCTTCAGGATG...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000592872.5
CDS-3UTR CCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAGCAGCCCCAGGTCTCTaGGTCAGGCGGACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGAAPGL*VRRTVP
Trigger: AGGGACCGTCCGCCTGACCCAGAGACCTGGGGCTGC...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACGCAGCCCCAGGTCTCTaGGTCAGGCGGACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SQWWTGAAGAGTAPRQSHAAPGL*VRRTVP
Trigger: AGGGACCGTCCGCCTGACCCAGAGACCTGGGGCTGC...GTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACCCCACCTTCCACCCTaGGACACTGCCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGPHLPP*DTAGTS
Trigger: GGAGGTCCCGGCAGTGTCCCAGGGTGGAAGGTGGGG...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGGGCTGGTGCAACAGCTaGGATGGGGCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVGWCNS*DGAATA
Trigger: TGCTGTGGCTGCCCCATCCCAGCTGTTGCACCAGCC...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR CCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGACAGGGGGTCCAACCTaGGCATTGGTACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGTGGPT*ALVPGP
Trigger: TGGCCCAGGTACCAATGCCCAGGTTGGACCCCCTGT...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCAGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCACAGCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ARSLPLVPREGRLQGVHSGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...GCTGTGCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCTCCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: QCPAGLSRVPGVAGTHPSGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...GGAGGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGCTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLVGSHVGPALLVELLSRLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...CCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR TCA 90 bp TTCATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: FIWATSRSRSSPARCRSSLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...TGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GSLQELTPLPQHVARLLQRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...CTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACTCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ESQWWTGAAGAGTAPRQSVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...GCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LTPLPQHVARLLQPLVGSQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...GCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCACACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCCACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGPPPAPGPRRLAAGAHTHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...GGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651077.1
CDS-3UTR GCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAAGGAGCTGTGGCTGGTaGAACAGCTGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTRSCGW*NSWDGA
Trigger: TGCCCCATCCCAGCTGTTGCACCAGCCACAGCTCCT...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAAGGAGCTGTGGCTGGTaGAACAGCTGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPRSCGW*NSWDGA
Trigger: TGCCCCATCCCAGCTGTTGCACCAGCCACAGCTCCT...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp AGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCAGGGGCCGTGCAACCCCCTCGGCTCTGGCCTaGCCCTCGGCAGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SQRRNKPATENLSRGRATPSALA*PSAVWS
Trigger: AGACCACACTGCCGAGGGGCAGGCCAGAGCCGAGGG...GGTTGCACGGCCCCTGGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp CCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCACCCCTCACTACTaGCCCCAAAGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PLVGSHVGPALLVELLSRGTPHY*PQRAGF
Trigger: GAACCCTGCCCTTTGGGGGCAGTAGTGAGGGGTGCC...CCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CCTGCTGTCTCTGGAAGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PAVSGSQRRNKPATENLSGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...GGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCTTCCAGAGACAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: APRGQPEEAASAAGNAACNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPLQVLAGSLQELTPLPQTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...CTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLRESKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTAGGGGCTGCGGGAGCTaGGACGGCCCCACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRRGCGS*DGPTSK
Trigger: CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR CCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCTGGGCCAGTTATTATaGCAGGCCCCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSLGQLL*QAPVWG
Trigger: GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAG...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAACAGGGGGTCCAACCTaGGCATTGGTACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTTGGPT*ALVPGP
Trigger: TGGCCCAGGTACCAATGCCCAGGTTGGACCCCCTGT...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGCGCTTCTTTGCCTTaGAGCCCATCTCCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPRASLP*SPSPSR
Trigger: GCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCG...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586564.5
CDS-3UTR TCA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: RRTNAPSPRARTRREAGPTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCTCGCCCCAGGCCCTaGCCCTCCCTCCGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAARPRP*PSLRPK
Trigger: TTTTGGGCGGAGGGAGGGTCAGGGCCTGGGGCGAGC...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436106.3
CDS-3UTR TCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCAGTGCCCGGCAGGACTaGGCAGGGTTCCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWASARQD*AGFPGS
Trigger: CGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACT...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGGTCCCAGTTTCTGGATaGGGCGCCTCCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKVPVSG*GASQAV
Trigger: CACAGCCTGGGAGGCGCCTCATCCAGAAACTGGGAC...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCGTCCCAGTTTCTGGATaGGGCGCCTCCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QWWTGAAGAGTAPRQSHFVPVSG*GASQAV
Trigger: CACAGCCTGGGAGGCGCCTCATCCAGAAACTGGGAC...GAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCAGAAGCATGACCAGTaGGAAGTCCCTAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTQKHDQ*EVPRAQ
Trigger: CTGGGCCCTAGGGACTTCTCACTGGTCATGCTTCTG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR TCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCACAGAAGCATGACCAGTaGGAAGTCCCTAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPQKHDQ*EVPRAQ
Trigger: CTGGGCCCTAGGGACTTCTCACTGGTCATGCTTCTG...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCACAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPQHALL*LGAHLW
Trigger: CCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTTCTCTCCCGTCCCCTTaGTGCCGGGGTCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRSLPSP*CRGLRS
Trigger: GGACCTGAGACCCCGGCAGCAAGGGGACGGGAGAGA...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR GCA 90 bp AGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRPDTHESFMCRAQPLGRTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...GCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCATCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LTPLPQHVARLLQPLVGSAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...GCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGAAGTGGACAGGCGAGTaGCTGCCCCGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVKWTGE*LPRERK
Trigger: CTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTT...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGCACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCCAGGCGGACGGTCCCTaGATGCAGTGCCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRPDTHESFMCRAQPLGRQADGP*MQCPAG
Trigger: TCCTGCCGGGCACTGCATGCAGGGACCGTCCGCCTG...GCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGTCCACCCTGGGACACTaGCGGGACCTCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQSTLGH*RDLPRP
Trigger: TGGCCGAGGGAGGTCCCGGCAGTGTCCCAGGGTGGA...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGACTGAGCTCTTGCATTaGCTGCCGCCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQTELLH*LPPSPL
Trigger: AAGAGGTGATGGCGGCAGGCAATGCAAGAGCTCAGT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGAGGCAGCCTCGGGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAEAASG*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACCCGAGGCTGCCTC...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS-3UTR CCA 90 bp GAGACGCAACAAGCCCGCCACCGAAAACCTCTCCAGGGGCCGTGCAACCTCCTGCTTGGAGCCCATCTCTaGGCGCGGGACCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ETQQARHRKPLQGPCNLLLGAHL*ARDPKA
Trigger: GGCTTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAG...CAGGAGGTTGCACGGCCCCTGGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCTGGTGACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGDSHIQQKLRMAPCSPTGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...CGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp ACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: TSASARCPPAAAAGWQPRQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...ACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCTTCACCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: REVSLRRQPRLPVMLPASPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...TGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp ACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: TSASARCPPAAAAGWQPRNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...ACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCCTAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: GWQPRRPGFAGRAALPGPNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...AGGCCCCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCACTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GPPPAPGPRRLAAGAHTSLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...AGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQCSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTAGCAAGGGCAGTGGCTaGGAGACACCCGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRSKGSG*ETPVPW
Trigger: CCACGGCACGGGTGTCTCCCAGCCACTGCCCTTGCT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLREDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGCGCTTCTTTGCCTTaGAGCCCATCTCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSRASLP*SPSLKA
Trigger: CGCCTTCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000588849.1
CDS-3UTR CCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCATCCTGAAGGGAACTaGGGGGTCTTCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVHPEGN*GVFRGQ
Trigger: CTGGCCCCGGAAGACCCCCCAGTTCCCTTCAGGATG...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000592872.5
CDS-3UTR CCA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGCTCCCAGGCTGTGTGTaGCAGGCCCCCTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFRLPGCV*QAPFLQ
Trigger: CTGAAGAAAGGGGGCCTGCCACACACAGCCTGGGAG...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAACCGGGGAGAGTCAATaGTGGACAGGGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGTGESQ*WTGAAG
Trigger: TCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGT...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAGGCTGGTGCAACAGCTaGGATGGGGCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGGWCNS*DGAATA
Trigger: TGCTGTGGCTGCCCCATCCCAGCTGTTGCACCAGCC...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGGGGGCACAGGGTTTGTaGGCACCCCACCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQGAQGL*APHPDG
Trigger: CCCATCTGGGTGGGGTGCCCACAAACCCTGTGCCCC...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGTGGGCTGGGACCCCGTaGATGCCAGTCTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRWAGTP*MPVWGR
Trigger: TCGGCCCCAGACTGGCATTCACGGGGTCCCAGCCCA...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: APRGQPEEAASAAGNAACRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp TCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: SRSRSSPARCRSSHLCLSRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...GCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp CTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVGSHVGPALLVELLSRGGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...GCCCCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp CCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PLVGSHVGPALLVELLSRGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...CCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGCTGCTTCTCTTGGGTaGCCCCAGCGGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVAASLG*PQRPRV
Trigger: GACCCTGGGCCGCTGGGGTCACCCAAGAGAAGCAGC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCGGGGTCTTCTTAACATaGCGGATGCAGCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RCRSSHLCLSTLPACCSRGVFLT*RMQPGV
Trigger: CACACCTGGCTGCATCCGTCATGTTAAGAAGACCCC...GCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCGGGGTCTTCTTAACATaGCGGATGCAGCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: APRGQPEEAASAAGNAACGVFLT*RMQPGV
Trigger: CACACCTGGCTGCATCCGTCATGTTAAGAAGACCCC...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GTGGGCGGCAGGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGCGCCGTGGCTCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: VGGRDASSVTGRRLLAAAAPWLT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGAGCCACGGCGC...CGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGCCGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR GCA 90 bp AGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCAGGGGCCGTGCAACCGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: SQRRNKPATENLSRGRATEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...GGTTGCACGGCCCCTGGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTACGTTGCCCGCCTGCTaGAGCCGCTGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVTLPAC*SRWLAA
Trigger: GGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGT...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCTTCAAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: REVSLRRQPRLPVMLPASRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...TGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGACTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGAGCTGTGGCTGGTaGAACAGCTGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: QWWTGAAGAGTAPRQSHFRSCGW*NSWDGA
Trigger: TGCCCCATCCCAGCTGTTGCACCAGCCACAGCTCCT...GAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCGTGAGCTCTTGCATTGCCTaGCGCCATCACCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PSIRRGACVNTHVGWDPVSSCIA*RHHLFL
Trigger: GAGGAAGAGGTGATGGCGGCAGGCAATGCAAGAGCT...CACGGGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTACTGAGCTCTTGCATTaGCTGCCGCCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGTELLH*LPPSPL
Trigger: AAGAGGTGATGGCGGCAGGCAATGCAAGAGCTCAGT...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp AGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAAAGGGCAGGGTTCCCTaGAGTCCCCGAGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSHLCLSTLPACCSRWLAKGRVP*SPRVSL
Trigger: CAAGCTCACTCGGGGACTGCAGGGAACCCTGCCCTT...TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACAAGGGCAGGGTTCCCTaGAGTCCCCGAGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHKGRVP*SPRVSL
Trigger: CAAGCTCACTCGGGGACTGCAGGGAACCCTGCCCTT...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCTCGAGATCTCGCCACTaGACTCCAGCCTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LEGDCWRQRASSPTWEEISRSRH*TPAFRG
Trigger: GCCCCGGAAGGCTGGAGTGCAGTGGCGAGATCTCGA...GATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR GCA 90 bp GGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTTCACTGGAAGGAGACTaGTGGCGGCAGCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GMLLQSLEGDCWRQRASSSLEGD*WRQRAS
Trigger: GCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGA...AGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGCTTGGAGCCCATCTCTaGGCGCGGGACCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQLGAHL*ARDPKA
Trigger: GGCTTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAG...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGCTTGGAGCCCATCTCTaGGCGCGGGACCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: EGDCWRQRASSPTWEEIKLGAHL*ARDPKA
Trigger: GGCTTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAG...CTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp CAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCAGGGGCCGTGCAACCTCCCGCGCTTCTTTGCCTTaGAGCCCATCTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QRRNKPATENLSRGRATSRASLP*SPSLGA
Trigger: CGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...GGAGGTTGCACGGCCCCTGGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp CTCACTACTGCCCCCAAAGGGCAGGGTTCCCTGCAGTCCCCGAGTGAGCTTGCCCGCGCTTCTTTGCCTTaGAGCCCATCTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LTTAPKGQGSLQSPSELARASLP*SPSLGA
Trigger: CGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...GGCAAGCTCACTCGGGGACTGCAGGGAACCCTGCCCTTTGGGGGCAGTAGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGCSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GTAGAGCTGCTCTCCCGGGGCCTCCGCATCCTCCATCATCCTGAAGGGAACTGGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VELLSRGLRILHHPEGNWDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CCAGTTCCCTTCAGGATGATGGAGGATGCGGAGGCCCCGGGAGAGCAGCTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCAAGTCCCAGTTTCTaGATGAGGCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKPSPSF*MRRLPG
Trigger: GCCTGGGAGGCGCCTCATCCAGAAACTGGGACTTGG...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGACTAGGAGCTGTGGCTaGTGCAACAGCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFRTRSCG*CNSWDG
Trigger: CCCATCCCAGCTGTTGCACCAGCCACAGCTCCTAGT...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CTGAGGCCAGGAGTCTCCCCCTGGTCCCAAGGGAGGGCAGGCTCCAGGGGGTGCCTGGGCATTGGTACCTaGGCCAGTTATTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRPGVSPWSQGRAGSRGCLGIGT*ASYYGR
Trigger: CCTGCCATAATAACTGGCCCAGGTACCAATGCCCAG...GCACCCCCTGGAGCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGCCAGGAGTCTCCCCCTaGTCCCAAGGGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVPGVSP*SQGRAG
Trigger: GCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGG...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTCCAGGAGTCTCCCCCTaGTCCCAAGGGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVPGVSP*SQGRAG
Trigger: GCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGG...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCCGGGGAGGCACTaGCTGAGGCCAGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVGPGRH*LRPGVS
Trigger: GGAGACTCCTGGCCTCAGCCAGTGCCTCCCCGGCCC...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCCAGAAAGCAGAAACTaGGGGCACAGGGTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AVAGRHPCRGARPSLAGSPESRN*GHRVCG
Trigger: CCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGG...AGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCCCAGAAAGCAGAAACTaGGGGCACAGGGTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPPESRN*GHRVCG
Trigger: CCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGG...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCCTCAAAATGGGCTGTaGGCGGGTAGGTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTPQNGL*AGRFIA
Trigger: AGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR CCA 90 bp GAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGCTGGAAGGAGACTGCTaGCGGCAGCGGGCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: EGDCWRQRASSPTWEEIKLEGDC*RQRASS
Trigger: AGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAG...CTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp GGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: GPRRLAAGAHTSASARCPTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...CGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR TCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGACTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCAGAAGCATGACCAGTaGGAAGTCCCTAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLREQKHDQ*EVPRAQ
Trigger: CTGGGCCCTAGGGACTTCTCACTGGTCATGCTTCTG...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGGCGGGAGGAACACTTaGGCCCAAGAGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHGGRNT*AQELET
Trigger: GGTCTCTAACTCTTGGGCTCAAGTGTTCCTCCCGCC...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGAAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCAGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGGTCCCTGCATGCAGTaGCCGGCAGGACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAGPCMQ*PAGLSR
Trigger: CCTGCTCAGTCCTGCCGGGCACTGCATGCAGGGACC...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGTCCACCCTGGGACACTaGCGGGACCTCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVSTLGH*RDLPRP
Trigger: TGGCCGAGGGAGGTCCCGGCAGTGTCCCAGGGTGGA...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCAGTGCAGCAGGGCTGAAGCTGCTCCCCCACGTATaGAAGCCCAGTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TYGSLLPHVCKPSAAGLKLLPHV*KPSAAG
Trigger: CCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCAG...CTTCAGCCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCACACAGCAGCATCACTaGCTGCTGACCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGTQQHH*LLTTPS
Trigger: GGATGGGGTGGTCAGCAGGCAGTGATGCTGCTGTGT...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp TGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCACGCGCTTCTTTGCCTTaGAGCCCATCTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: WKETAGGSGRALRLGRKSRASLP*SPSLGA
Trigger: CGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...TGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp TCACTCCTCATGTCACTGCTCTTTGAAAGCAAATGTGGGCTGGGCGCCGTGGCTGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLLMSLLFESKCGLGAVAGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...AGCCACGGCGCCCAGCCCACATTTGCTTTCAAAGAGCAGTGACATGAGGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYGSAPP*GALGGW
Trigger: CCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCC...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGAACACCCACGTGGGCTaGGACCCCGTGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQNTHVG*DPVNAS
Trigger: ACTGGCATTCACGGGGTCCCAGCCCACGTGGGTGTT...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGAACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGTEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCAACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TSASARCPPAAAAGWQPRLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...ACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCATGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGATCAACGTGGCTTGTaGGAGGAGCCCGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRDQRGL*EEPGAQ
Trigger: CTGGGCCCCGGGCTCCTCCCACAAGCCACGTTGATC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWALQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCGCCCAAAAACACGGTaGCCAAGGCTTCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKRPKTR*PRLQGL
Trigger: CAGACCCTGAAGCCTTGGCCACCGTGTTTTTGGGCG...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436106.3
CDS-3UTR CCA 90 bp AGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACCGCGCTTCTTTGCCTTaGAGCCCATCTCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SQWWTGAAGAGTAPRQSHRASLP*SPSLKA
Trigger: CGCCTTCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...GTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436106.3
CDS-3UTR CCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGCCAAGTCCCAGTTTCTaGATGAGGCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQPSPSF*MRRLPG
Trigger: GCCTGGGAGGCGCCTCATCCAGAAACTGGGACTTGG...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGCCCCACCTTCCACCCTaGGACACTGCCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVPHLPP*DTAGTS
Trigger: GGAGGTCCCGGCAGTGTCCCAGGGTGGAAGGTGGGG...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGAGGGGAGAGTCAATGGTaGACAGGGGCTGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGGESQW*TGAAGA
Trigger: AGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCC...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGGTGCAACAGCTGGGATaGGGCAGCCACAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQVQQLG*GSHSSH
Trigger: GTGGCTGCTGTGGCTGCCCCATCCCAGCTGTTGCAC...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGACTAGGAGCTGTGGCTaGTGCAACAGCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVTRSCG*CNSWDG
Trigger: CCCATCCCAGCTGTTGCACCAGCCACAGCTCCTAGT...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR TCA 90 bp CGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RQRASSPTWEEIKLNSSLPGPGW*TLDPLP
Trigger: CGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGG...CAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLRERARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: RRMNRSPSIRRGACVNTHRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...GTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCCTGGCAGGGTGGCTATaGGACTCAGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPLAGWL*DSGHPG
Trigger: CCCAGGGTGTCCTGAGTCTCATAGCCACCCTGCCAG...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCTTCAGGCGGGAGGAACACTTaGGCCCAAGAGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: REVSLRRQPRLPVMLPASGGRNT*AQELET
Trigger: GGTCTCTAACTCTTGGGCTCAAGTGTTCCTCCCGCC...TGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR GCA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFREHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTCACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGGCAGGCTCCAGGGGGTaGACAGCACCCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQAGSRG*TAPQTG
Trigger: CCCTGTCTGGGGTGCTGTGCACCCCCTGGAGCCTGC...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGACTGAGCTCTTGCATTaGCTGCCGCCATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFRTELLH*LPPSPL
Trigger: AAGAGGTGATGGCGGCAGGCAATGCAAGAGCTCAGT...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCCAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGQHALL*LGAHLS
Trigger: AGAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592872.5
CDS-3UTR GCA 90 bp TGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCACTAGGAGGCGGAGGTTaGGCCACTGCATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WKETAGGSGRALRLGRKSLGGGG*ATAFQP
Trigger: AGGCTGGAATGCAGTGGCGCAACCTCCGCCTCCTAG...TGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp GCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: AEPESRNWGHRVCGHPTQQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...CTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: EGDCWRQRASSPTWEEIKQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...CTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: HVARLLQPLVGSHVGPALWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...CAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAGCATGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: DRGCGSWDGPTSKPLQGACSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...TGCTCCCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: APGPRRLAAGAHTSASARCSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...ACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGCCCCACCTTCCACCCTaGGACACTGCCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLPHLPP*DTAGTS
Trigger: GGAGGTCCCGGCAGTGTCCCAGGGTGGAAGGTGGGG...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGAGGGGCTGCGGGAGCTaGGACGGCCCCACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQRGCGS*DGPTSK
Trigger: CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCT...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCGGGGAGAGTCAATGGTaGACAGGGGCTGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPGESQW*TGAAGA
Trigger: AGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCC...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGGGGAGAGTCAATGGTaGACAGGGGCTGCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVGESQW*TGAAGA
Trigger: AGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTACTAGGAGCTGTGGCTaGTGCAACAGCTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRTRSCG*CNSWDG
Trigger: CCCATCCCAGCTGTTGCACCAGCCACAGCTCCTAGT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR CCA 90 bp AGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCCTGGGCCAGTTATTATaGCAGGCCCCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRPDTHESFMCRAQPLGRLGQLL*QAPVWG
Trigger: GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAG...GCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACCCAGAAAGCAGAAACTaGGGGCACAGGGTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SQWWTGAAGAGTAPRQSHPESRN*GHRVCG
Trigger: CCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGG...GTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCAGCCTCAGACCGGCTaGGGCTCACTCCTCATGTCA +
Preference number: 4 (lower is better)
Translates to: GMLLQSLEGDCWRQRASSQPQTG*GSLLMS
Trigger: TGACATGAGGAGTGAGCCCCAGCCGGTCTGAGGCTG...AGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp TGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCATCACTGCTTAGCGGGTaGTCCAGCCTCAGACCGGCT +
Preference number: 4 (lower is better)
Translates to: WKETAGGSGRALRLGRKSSLLSG*SSLRPA
Trigger: AGCCGGTCTGAGGCTGGACCACCCGCTAAGCAGTGA...TGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp CAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: QWWTGAAGAGTAPRQSHFTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...GAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCAAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGTGGGCTCCTGGCCAGTaGCTCACAGCGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMWAPGQ*LTAVLQ
Trigger: CTGGAGGACCGCTGTGAGTCACTGGCCAGGAGCCCA...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGTCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCAATAAACTGAGCTCTTaGATTGCCTGCCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: QPQHQEGRLCQHPRGLGPNKLSS*IACRHH
Trigger: GTGATGGCGGCAGGCAATGCAAGAGCTCAGTTTATT...GGGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCAATAAACTGAGCTCTTaGATTGCCTGCCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLNKLSS*IACRHH
Trigger: GTGATGGCGGCAGGCAATGCAAGAGCTCAGTTTATT...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTGGTGGGCGGCAGGGATaGTTCTTCAGTCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLQSLEGDCWRQRASSPTGGRQG*FFSHWK
Trigger: CTTCCAGTGACTGAAGAAGCATCCCTGCCGCCCACC...AGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: LTPLPQHVARLLQPLVGSWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...GCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CCA 90 bp GAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCAAACAAAGCTGGCTGTaGGTCTGGAGAGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ESQWWTGAAGAGTAPRQSKQSWL*VWREGE
Trigger: CTCACCCTCTCTCCAGACCCACAGCCAGCTTTGTTT...GCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCCTCCCAGGCTGTGTGTaGCAGGCCCCCTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWALPGCV*QAPFLQ
Trigger: CTGAAGAAAGGGGGCCTGCCACACACAGCCTGGGAG...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCAGGGGCTGCGGGAGCTaGGACGGCCCCACGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGRGCGS*DGPTSK
Trigger: CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCT...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCCACAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGCATTGGTACCTaGGCCAGTTATTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: QPQQPLPGRVNGGQGLRELGIGT*ASYYGR
Trigger: CCTGCCATAATAACTGGCCCAGGTACCAATGCCCAG...CTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAGCAGTCCAACCTGGGCATTaGTACCTGGGCCAGTTATTA +
Preference number: 4 (lower is better)
Translates to: DRGCGSWDGPTSKPLQGAVQPGH*YLGQLL
Trigger: TAATAACTGGCCCAGGTACCAATGCCCAGGTTGGAC...TGCTCCCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCCAGGTTAGATCCCTaGAAGCAGAGCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKPRLDP*KQSQKA
Trigger: TGCTTTCTGGCTCTGCTTCCAGGGATCTAACCTGGG...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCAGTGCAGCAGGGCTGAAGCGTGCCGCACGGGTCTaGGCTGATCAAATCACCTCT +
Preference number: 4 (lower is better)
Translates to: TYGSLLPHVCKPSAAGLKRAARV*ADQITS
Trigger: AGAGGTGATTTGATCAGCCCAGACCCGTGCGGCACG...CTTCAGCCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp CCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCTGCCCCTCGGCAGTGTaGTCTCCCACGGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: PHSAETTYGSLLPHVCKPCPSAV*SPTDEG
Trigger: GCCTTCGTCCGTGGGAGACCACACTGCCGAGGGGCA...GGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR TCA 90 bp CATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCAACACGCCCTCGGGCTGCTCTaGCATTGGGTGGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: HWVGTRWMESQLTPRSQHALGLL*HWVGTR
Trigger: GCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGC...GTGTTGGGATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 4 (lower is better)
Translates to: GQWLGDTRAVELGPAWLGSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...ACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGCAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRQHALL*LGAHLW
Trigger: CCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588871.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGSTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGGCCACCTTGTGCGCTaGCCAAGCCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVGHLVR*PSLQAP
Trigger: CGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGCTGGGAGACACCCGTaGCGTGGAGCTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIAGRHP*RGARPS
Trigger: GCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCATGGTGGACAGGGGCTaGGGGAGCTGGGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVMVDRG*GSWDGP
Trigger: GGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCAT...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCTTGGAGCCCATCTCTaGGCGCGGGACCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGLGAHL*ARDPKA
Trigger: GGCTTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAG...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGCGCGCTTCTTTGCCTTaGAGCCCATCTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQRASLP*SPSLGA
Trigger: CGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGGGGCGCTGGGCGGGTaGGCAGCAGCACGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNGALGG*AAARAS
Trigger: AGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCC...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRCSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: RRPDTHESFMCRAQPLGRRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...GCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCAGTGCAGGGCCGTGCAACCTCCTaGAGCACACACTTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QQKLRMAPCSPTYASPVQGRATS*STHLGR
Trigger: CCTCCCTAAGTGTGTGCTCCAGGAGGTTGCACGGCC...CTGCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp GGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTGAGAATCGCTTGAACTaGGGAGTCGGAGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GMLLQSLEGDCWRQRASSENRLN*GVGACS
Trigger: ACTGCAGGCTCCGACTCCCCAGTTCAAGCGATTCTC...AGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIPGPGW*TLDPLP
Trigger: CGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGG...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 4 (lower is better)
Translates to: APRGQPEEAASAAGNAACSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR TCA 90 bp TCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACAACACATTTAATAAACTaGGCTCTTGCATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGAPGRSRSQRHHSDGQTTHLIN*ALALPA
Trigger: GGCAGGCAATGCAAGAGCTCAGTTTATTAAATGTGT...TGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GGTGACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATCCAGTGCAGCAGGGCTaGAGCAGCACCGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: GDSHIQQKLRMAPCSPTYPVQQG*SSTDFR
Trigger: CCTGAAGTCGGTGCTGCTTCAGCCCTGCTGCACTGG...ATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp CTGCTGTCTCTGGAAGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCACAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLEARDATSPPPKTSPQHALL*LGAHLW
Trigger: CCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...TGGAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCTTCCAGAGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp CAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: QRASSPTWEEIKLNSSLLEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...AAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCAGCACGTTGCCCGCCTaGTGCAGCCGCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSISTLPA*CSRWLA
Trigger: TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
CDS-3UTR GCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAGGACAGGCGAGTGCCTaGCCCGGGAGAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKGQASA*PGRGRR
Trigger: CCTCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCC...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGGCTGGCCCTCGGGCTaGTCTGACATTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIGWPSG*SDIGWA
Trigger: TGCCCACCCAATGTCAGAGCAGCCCGAGGGCCAGCC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGCAGGCTCCAGGGGGTaGACAGCACCCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVAGSRG*TAPQTG
Trigger: CCCTGTCTGGGGTGCTGTGCACCCCCTGGAGCCTGC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTCGCTGTCTATGTGCTaGCACAGAATTGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: PRGPTAEHGHCELTTESQSLSMC*HRIAET
Trigger: GGTCTCAGCAATTCTGTGGCAGCACATAGACAGCGA...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCATGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGGGCCGGGGAGGCACTaGCTGAGGCCAGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNGPGRH*LRPGVS
Trigger: GGAGACTCCTGGCCTCAGCCAGTGCCTCCCCGGCCC...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTGGCACCCCACCCAGATaGGCCGGGGAGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLGTPPR*AGEALA
Trigger: AGCCAGTGCCTCCCCGGCCCATCTGGGTGGGGTGCC...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GTGGGCGGCAGGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGCGAGCTCTCCGACTTaGGAGGAAATCAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: VGGRDASSVTGRRLLAAAASSPT*EEIKLN
Trigger: GTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGC...CGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCCTGCCGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp TCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCGTGAGAGGTGGGCATTaGCGTCCTGGTGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHIQQKLRMAPCSPTYASVRGGH*RPGDSH
Trigger: GTGGGAGTCACCAGGACGTCAATGCCCACCTCTCAC...GCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR TCA 90 bp GAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGCATGTCACTGCTCTTTaGAAGCAAATGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGDCWRQRASSPTWEEIKHVTAL*KQMWAG
Trigger: CCCAGCCCACATTTGCTTTCAAAGAGCAGTGACATG...CTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp CTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTGGGAGGAAATCAAGTTaGACAGCTCACTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: LLQSLEGDCWRQRASSPTGRKSS*TAHCLA
Trigger: CGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCC...AGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR GCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCTCCCGTCCCCTTGCTaGCGGGGTCTCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNLPSPC*RGLRSA
Trigger: AGCGGACCTGAGACCCCGGCAGCAAGGGGACGGGAG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAGTGCAGGCCACCTTGTaGGCTGCCCAAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKVQATL*AAQACR
Trigger: CCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCAC...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCTGGGACCCCGTGAATaGCAGTCTGGGGCCGACGGA +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVLGPRE*QSGADG
Trigger: TCCGTCGGCCCCAGACTGGCATTCACGGGGTCCCAG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTGAAGGAGGTGGCACCTaGTCCCAGGGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLEGGGT*SQGPHC
Trigger: GCAGTGGGGCCCCTGGGAGCAGGTGCCACCTCCTTC...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp ACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAACCTCTCCAGGGGCCGTaGAACCTCCTGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: TPTFSRNYVWLPAPPRMQPLQGP*NLLEHT
Trigger: TGTGTGCTCCAGGAGGTTGCACGGCCCCTGGAGAGG...TTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp TCCTGCTGTCTCTGGAAGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCCCTGGCTCTCATTCCTaGTGTCTCTGGAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SCCLWKPETQQARHRKPLPGSHS*CLWKPE
Trigger: CTCTGGCTTCCAGAGACAGCAGGAATGAGAGCCAGG...GAGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCTTCCAGAGACAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp ACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCAGCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: TFSRNYVWLPAPPRMQAQQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...CTGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCACGGAGCCAGCTGGGTaGGTCCCACCAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSITEPAG*VPPTRH
Trigger: ATGCCGAGTTGGTGGGACCCACCCAGCTGGCTCCGT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGATGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWACSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVCSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGTGCTCTGACATTGGGTaGGCACTCGCTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRCSDIG*ALAGWN
Trigger: ATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCA...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGAGCTAGGCCCAGCCTaGCTGGGTCTCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVELGPA*LGLRAA
Trigger: AGCAGCCCTGAGACCCAGCCAGGCTGGGCCTAGCTC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCTCCAGCAAGGGCAGTaGCTGGGAGACACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVLQQGQ*LGDTRA
Trigger: GGCACGGGTGTCTCCCAGCCACTGCCCTTGCTGGAG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAAACAAAGCTGGCTGTaGGTCTGGAGAGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPKQSWL*VWREGE
Trigger: CTCACCCTCTCTCCAGACCCACAGCCAGCTTTGTTT...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCACCGGGGAGAGTCAATaGTGGACAGGGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSITGESQ*WTGAAG
Trigger: TCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCCTGGGCATTGGTACCTaGGCCAGTTATTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGLGIGT*ASYYGR
Trigger: CCTGCCATAATAACTGGCCCAGGTACCAATGCCCAG...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGAGTCCAACCTGGGCATTaGTACCTGGGCCAGTTATTA +
Preference number: 4 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGVQPGH*YLGQLL
Trigger: TAATAACTGGCCCAGGTACCAATGCCCAGGTTGGAC...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCCAGGAGTCTCCCCCTaGTCCCAAGGGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNPGVSP*SQGRAG
Trigger: GCCTGCCCTCCCTTGGGACCAGGGGGAGACTCCTGG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCCCCAGGTTAGATCCCTaGAAGCAGAGCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAPRLDP*KQSQKA
Trigger: TGCTTTCTGGCTCTGCTTCCAGGGATCTAACCTGGG...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCTGGTGACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGAGCAGAAACTACGTATaGCTCCCTGCTCCCCCACGT +
Preference number: 4 (lower is better)
Translates to: PGDSHIQQKLRMAPCSPTSRNYV*LPAPPR
Trigger: ACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCT...CGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp CCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCTGGACTCCACTGAGCTaGCCTGGCTCTCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: PHSAETTYGSLLPHVCKPWTPLS*PGSHSC
Trigger: GCAGGAATGAGAGCCAGGCCAGCTCAGTGGAGTCCA...GGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp CGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGTGCTTCTTCAGTCACTaGAAGGAGACTGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQRASSPTWEEIKLNSSLCFFSH*KETAGG
Trigger: GCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCA...CAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR TCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLPGPGW*TLDPLP
Trigger: CGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGG...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGAGAGCACGGCCACTGTaGGCTGACGACAGAATCACA +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLRARPL*ADDRIT
Trigger: TGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCT...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCACACATTTAATAAACTaGGCTCTTGCATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESQWWTGAAGAGTAPRQSTHLIN*ALALPA
Trigger: GGCAGGCAATGCAAGAGCTCAGTTTATTAAATGTGT...GCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp TTCCTGCTGTCTCTGGAAGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCGCACGGGTCTGGGCTaGTCAAATCACCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FLLSLEARDATSPPPKTSRTGLG*SNHLCH
Trigger: ATGACAGAGGTGATTTGATCAGCCCAGACCCGTGCG...AGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCTTCCAGAGACAGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATTCTGCCTCAGCACGTTaGCCGCCTGCTGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNSASAR*PPAAAA
Trigger: AGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGA...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATTCCTCGCCGGCTCGCTaGAGGAGCTCACACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNSSPAR*RSSHLC
Trigger: GCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGA...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAACAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTTCGCTGTCTATGTGCTaGCACAGAATTGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GPRAALTLGGHSLDGITVSLSMC*HRIAET
Trigger: GGTCTCAGCAATTCTGTGGCAGCACATAGACAGCGA...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCCCACTACGTATGGCTCCCTaGTCCCCCACGTATGCAAGC +
Preference number: 4 (lower is better)
Translates to: HIQQKLRMAPCSPTYASPLRMAP*SPTYAS
Trigger: GCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAG...TGGGCTTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTCCCCCAGGGAAAGCCTaGGTGCAGGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLPPGKA*VQATLC
Trigger: GCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGG...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAGACACCCTGGGCTCCTaGCCAGTGACTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKDTLGS*PVTHSG
Trigger: ACCGCTGTGAGTCACTGGCCAGGAGCCCAGGGTGTC...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCAACACCTGGGCCAGTTATTATaGCAGGCCCCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HWVGTRWMESQLTPRSQHLGQLL*QAPVWG
Trigger: GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAG...GTGTTGGGATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCAACACACAGGGGGTCCAACCTaGGCATTGGTACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HWVGTRWMESQLTPRSQHTGGPT*ALVPGP
Trigger: TGGCCCAGGTACCAATGCCCAGGTTGGACCCCCTGT...GTGTTGGGATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCCTCAAAATGGGCTGTaGGCGGGTAGGTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMPQNGL*AGRFIA
Trigger: AGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCAAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 4 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTAGCGGGTGGTCCCAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPTWEEIKLNSSLLSGWSQHALL*LGAHLW
Trigger: CCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTG...GGACCACCCGCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR GCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLEHWIL*RRTPHI
Trigger: GATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTC...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATAGGAGCTCACACCTCTaGCTCAGCACGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNRSSHL*LSTLPA
Trigger: GGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAGCCGGTAATGCTGCCTaGTTCATCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKAGNAA*FIWATS
Trigger: GGAGGTGGCCCAGATGAAGCAGGCAGCATTACCGGC...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCAGGGAAAGCCTGGGTaGAGGCCACCTTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNQGKPG*RPPCAL
Trigger: CAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGTCGCTGTCTATGTGCTaGCACAGAATTGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GPTWALVPGPVIMAGPSVSLSMC*HRIAET
Trigger: GGTCTCAGCAATTCTGTGGCAGCACATAGACAGCGA...CACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCTCATCGCTGTCTATGTaGTGCCACAGAATTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SDGQTHTKALCAGPSLWASSLSM*CHRIAE
Trigger: CTCAGCAATTCTGTGGCAGCACATAGACAGCGATGA...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGTCATCGCTGTCTATGTaGTGCCACAGAATTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRSSLSM*CHRIAE
Trigger: CTCAGCAATTCTGTGGCAGCACATAGACAGCGATGA...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp CATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCAACACACACAGCAGCATCACTaGCTGCTGACCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: HWVGTRWMESQLTPRSQHTQQHH*LLTTPS
Trigger: GGATGGGGTGGTCAGCAGGCAGTGATGCTGCTGTGT...GTGTTGGGATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCGCGCTTCTTTGCCTTaGAGCCCATCTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNRASLP*SPSLGA
Trigger: CGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588871.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCATCCTGAAGGGAACTaGGGGGTCGTGCCCATGTTG +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIHPEGN*GVVPML
Trigger: CAACATGGGCACGACCCCCCAGTTCCCTTCAGGATG...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR CCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAACCTGGACTCAGAAGTaGACAGGCGAGTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKTWTQK*TGECLP
Trigger: GGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGT...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: HRGTIQTARHTRKLYVQGRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...GCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTCATCCTGAAGGGAACTaGGGGGTCTTCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLHPEGN*GVFRGQ
Trigger: CTGGCCCCGGAAGACCCCCCAGTTCCCTTCAGGATG...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATACCGGGGAGAGTCAATaGTGGACAGGGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNTGESQ*WTGAAG
Trigger: TCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCCCAGGTTAGATCCCTaGAAGCAGAGCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMPRLDP*KQSQKA
Trigger: TGCTTTCTGGCTCTGCTTCCAGGGATCTAACCTGGG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCGGCCCAGGGTCGTTGTaGAGATCAACGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVGPGSL*RSTWLV
Trigger: CACAAGCCACGTTGATCTTCACAACGACCCTGGGCC...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCAGGAGTTAGGGGTGTaGTTCTCTCCCGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVQELGV*FSPVPL
Trigger: CAAGGGGACGGGAGAGAAGCACACCCCTAACTCCTG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGCCTCTGGGCCGCCTTaGCCAGGTTTCCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNASGPP*PGFHSS
Trigger: ACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGC...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAACACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTTGGAGCCCATCTCTCTaGCTCAGTTTCCCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLWSPSL*LSFPAV
Trigger: GACCGCGGGGAAACTGAGGCAGAGAGATGGGCTCCA...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592872.5
CDS-3UTR GCA 90 bp GAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGCACTCCTCATGTCACTaGTCTTTGAAAGCAAATGTG +
Preference number: 4 (lower is better)
Translates to: EGDCWRQRASSPTWEEIKHSSCH*SLKANV
Trigger: CACATTTGCTTTCAAAGAGCAGTGACATGAGGAGTG...CTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTCAGGATGGTGAACACTaGATCCTCTGCCGGCGCACC +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLQDGEH*ILCRRT
Trigger: GGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTG...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCCAAGTCCCAGTTTCTaGATGAGGCGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNPSPSF*MRRLPG
Trigger: GCCTGGGAGGCGCCTCATCCAGAAACTGGGACTTGG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp TTCCTGCTGTCTCTGGAAGCCAGAGACGCAACAAGCCCGCCACCGAAAACCTCTCATTCCTGCTGTCTCTaGAAGCCAGAGACGCAACAA +
Preference number: 4 (lower is better)
Translates to: FLLSLEARDATSPPPKTSHSCCL*KPETQQ
Trigger: TTGTTGCGTCTCTGGCTTCCAGAGACAGCAGGAATG...AGAGGTTTTCGGTGGCGGGCTTGTTGCGTCTCTGGCTTCCAGAGACAGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591027.2
3UTR CAA 72 bp AAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATG +
Preference number: 4 (lower is better)
Translates to: KALCAGPSLWAA*PRFPLKLLFRM
Trigger: CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCCTGCACATAAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 4 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp ACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAAGCATTGACGTCCTGGTaGCTCCCACATTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TPTFSRNYVWLPAPPRMQALTSW*LPHSAE
Trigger: TTCTGCTGAATGTGGGAGTCACCAGGACGTCAATGC...TTGCATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCACGAAAGCTTTATGTaGAGGGCCCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNHESFM*RAQPLG
Trigger: GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGTCATCGCTGTCTATGTaGTGCCACAGAATTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLSSLSM*CHRIAE
Trigger: CTCAGCAATTCTGTGGCAGCACATAGACAGCGATGA...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCAGCTCTTGCATTGCCTaGCGCCATCACCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVSSCIA*RHHLFL
Trigger: GAGGAAGAGGTGATGGCGGCAGGCAATGCAAGAGCT...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCAAACAAAGCTGGCTGTaGGTCTGGAGAGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIKQSWL*VWREGE
Trigger: CTCACCCTCTCTCCAGACCCACAGCCAGCTTTGTTT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATGTCCAACCTGGGCATTaGTACCTGGGCCAGTTATTA +
Preference number: 4 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYVQPGH*YLGQLL
Trigger: TAATAACTGGCCCAGGTACCAATGCCCAGGTTGGAC...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCCCTCAAAATGGGCTGTaGGCGGGTAGGTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVPQNGL*AGRFIA
Trigger: AGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
3UTR CAA 72 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGCCTTTGGCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SLWAALPRFPLK*LFRMKSLWQDP
Trigger: AGGGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATAGCTCTTGCATTGCCTaGCGCCATCACCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNSSCIA*RHHLFL
Trigger: GAGGAAGAGGTGATGGCGGCAGGCAATGCAAGAGCT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCTCGATCCCAACACCTaGACTCAGAAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNLDPNT*TQKWTG
Trigger: GCCTGTCCACTTCTGAGTCCAGGTGTTGGGATCGAG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: TAEHGHCELTTESQYSNNRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTAGGATGAAAAGCCTTTaGCAAGACCCTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLRMKSL*QDPPPH
Trigger: GTGCGGCGGAGGGTCTTGCCAAAGGCTTTTCATCCT...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp TGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAAAGCCTTACGGCCACTGTGAGCTaGCGACAGAATCACAGTACA +
Preference number: 4 (lower is better)
Translates to: WAALPRFPLKLLFRMKSLTATVS*RQNHST
Trigger: TGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGT...AAGGCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR TCA 90 bp CCATTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PFRRPDTHESFMCRAQPLSCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...CAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp CCTCAAAATGGGCTGTGGGCGGGTAGGTTCATCGCTGTCTATGTGCTGCCACAGACACATTTAATAAACTaGGCTCTTGCATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PQNGLWAGRFIAVYVLPQTHLIN*ALALPA
Trigger: GGCAGGCAATGCAAGAGCTCAGTTTATTAAATGTGT...CTGTGGCAGCACATAGACAGCGATGAACCTACCCGCCCACAGCCCATTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCTGGGTGGGCACTCGCTaGATGGAATCACAGTTAACA +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVWVGTR*MESQLT
Trigger: TGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCA...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR GCA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCAATAAACTGAGCTCTTaGATTGCCTGCCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: AEHGHCELTTESQYSNNVNKLSS*IACRHH
Trigger: GTGATGGCGGCAGGCAATGCAAGAGCTCAGTTTATT...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR TCA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCAGTTGCTATTTAGGATaGAAAGCCTTTGGCAAGACC +
Preference number: 4 (lower is better)
Translates to: ALTLGGHSLDGITVNTSISCYLG*KAFGKT
Trigger: GGTCTTGCCAAAGGCTTTTCATCCTAAATAGCAACT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp AGGGCAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGGGAGGCAGCCTCGGGTaGCCCGCCTGCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RAVAGRHPCRGARPSLAGGGSLG*PACCSR
Trigger: GCGGCTGCAGCAGGCGGGCAACCCGAGGCTGCCTCC...CCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS CCA 90 bp CCTCTGCCGGCGCACCCCGCACATCCTCCAGGATCTGCTCCACCGTaGGGGGCGCTGGGCGGGTGGGCAGCAGCACGCGCTTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PLPAHPAHPPGSAPP*GALGGWAAARASLP
Trigger: AGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCCCCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588427.5
ENST00000588849.1
ENST00000588871.5
ENST00000589421.1
ENST00000590621.1
ENST00000591027.2
ENST00000592605.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp TCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SGPPPAPGPRRLAAGAHTWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...GGTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS GCA 90 bp CCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAAGCCTaGAGGCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: PGKAWVQATLCAAQA*RPREVSLRRQPRVA
Trigger: GGCAACCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGCCTGCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS CCA 90 bp CCTGAGGAGGCAGCCTCGGGTTGCCCGCCTGCTGCAGCCGCTGGTTaGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: PEEAASGCPPAAAAG*QPRRPGFAGRAALP
Trigger: CGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACCCGAGGCTGCCTCCTCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS-3UTR CAA 90 bp ATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACACTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: IWATSRSRSSPARCRSSHWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...GTGTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp CGCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCACGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: RRTNAPSPRARTRREAGPRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...TGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GCCGCACTAACGCCCCCTCCCCCAGGGCCAGAACCCGCAGGGAAGCAGGCCCAGAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: AALTPPPPGPEPAGKQAQSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...CTGGGCCTGCTTCCCTGCGGGTTCTGGCCCTGGGGGAGGGGGCGTTAGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCTCCCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: QCPAGLSRVPGVAGTHPSRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...GGAGGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GCCCCGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: APRGQPEEAASAAGNAACEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...GCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp CACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCCACGTAGGCCCGGCTTTGGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: HVARLLQPLVGSHVGPALEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...CAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp TCATCTGGGCCACCTCCCGCTCCAGGTCCTCGCCGGCTCGCTGCAGGAGCTCACGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: SSGPPPAPGPRRLAAGAHEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...GTGAGCTCCTGCAGCGAGCCGGCGAGGACCTGGAGCGGGAGGTGGCCCAGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp GGCCGACGGACCCCCAGGGAAAGCCTGGGTGCAGGCCACCTTGTGCGCTGCCCAAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: GRRTPRESLGAGHLVRCPSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...TGGGCAGCGCACAAGGTGGCCTGCACCCAGGCTTTCCCTGGGGGTCCGTCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp AGCTTCCGGGGCCCCGGGACGGAGCCGCTCACAGAGGCACCATTCAGACGGCCACTGGGGGCACAGGGTTaGTGGGCACCCCACCCAGAT +
Preference number: 5 (lower is better)
Translates to: SFRGPGTEPLTEAPFRRPLGAQG*WAPHPD
Trigger: ATCTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAG...TGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCCGTCCCGGGGCCCCGGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VLAGSLQELTPLPQHVARHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...GCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp ATGCAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: MQCPAGLSRVPGVAGTHPHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...GGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp TGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGGGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: WWTGAAGAGTAPRQSHFREDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...CCTGAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLAARAS*PWSPSP
Trigger: GGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586564.5
CDS-3UTR CAA 90 bp GCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCTGGGACCGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: AAPASGGAPVSTPTWAGTAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...GGTCCCAGCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CAA 90 bp GGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSLQELTPLPQHVARLLQHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...CTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp GTCCTCGCCGGCTCGCTGCAGGAGCTCACACCTCTGCCTCAGCACGTTGCCCGCAGTCCCCGAGTGAGCTaGCCAGCCGGGGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: VLAGSLQELTPLPQHVARSPRVS*PAGVFL
Trigger: TAAGAAGACCCCGGCTGGCAAGCTCACTCGGGGACT...GCGGGCAACGTGCTGAGGCAGAGGTGTGAGCTCCTGCAGCGAGCCGGCGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS GCA 90 bp CCTCCATCATCCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTCCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: PPSSFRGQDGEHWIL*RRTPHILQDLLHRG
Trigger: CCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGATGATGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590621.1
CDS-3UTR CAA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGACGCGCTTCTTTGCCTaGGAGCCCATCTCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKTRFFA*EPISGR
Trigger: GCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAGCGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: LTPLPQHVARLLQPLVGSAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...GCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CAA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCGGGGTCGTGCCCATGTaGCGGGGGTTCCCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAGVVPM*RGFPGR
Trigger: ACGCCCTGGGAACCCCCGCAACATGGGCACGACCCC...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR CAA 90 bp ATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGGGCCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: MNRSPSIRRGACVNTHVGHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...GCCCACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGATGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: GESMVDRGCGSWDGPTSKRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...CTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: RMNRSPSIRRGACVNTHVRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...CACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp AGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCACGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: SSHLCLSTLPACCSRWLARAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588849.1
ENST00000590621.1
ENST00000651077.1
CDS-3UTR CAA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: PRGPTAEHGHCELTTESQEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPREDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CAATGGTGGACAGGGGCTGCGGGAGCTGGGACGGCCCCACGTCAAAGCCACTTCAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: QWWTGAAGAGTAPRQSHFSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...GAAGTGGCTTTGACGTGGGGCCGTCCCAGCTCCCGCAGCCCCTGTCCACCATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS GCA 90 bp TCTGTCATCACCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTCCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: SVITFRGQDGEHWIL*RRTPHILQDLLHRG
Trigger: CCCACGGTGGAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGATGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CAA 90 bp CAGCAGCCACTACCGGGGAGAGTCAATGGTGGACAGGGGCTGCGGGAGCTGGGAGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: QQPLPGRVNGGQGLRELGAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...TCCCAGCTCCCGCAGCCCCTGTCCACCATTGACTCTCCCCGGTAGTGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGATTCTCTCCCGTCCCCTaGCTGCCGGGGTCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGFSPVP*LPGSQV
Trigger: GACCTGAGACCCCGGCAGCAAGGGGACGGGAGAGAA...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427685.2
CDS-3UTR CAA 90 bp CTCACTACTGCCCCCAAAGGGCAGGGTTCCCTGCAGTCCCCGAGTGAGCTTGCCCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LTTAPKGQGSLQSPSELAHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...GGCAAGCTCACTCGGGGACTGCAGGGAACCCTGCCCTTTGGGGGCAGTAGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CAA 90 bp TCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCCTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SDGQTHTKALCAGPSLWAWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...GGCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GGCCCTCGGGCTGCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GPRAALTLGGHSLDGITVWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...AACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp ACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCACGTAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: TDEPQPQHQEGRLCQHPRSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...ACGTGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp ACGACGGATGAACCGCAGCCCCAGCATCAGGAGGGGCGCCTGTGTCAACACCCAAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: TTDEPQPQHQEGRLCQHPSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...TGGGTGTTGACACAGGCGCCCCTCCTGATGCTGGGGCTGCGGTTCATCCGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CCCAGGGGCCCCACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGAGCCTCTGGGCCGCCTaGCCCAGGTTTCCACTCAAG +
Preference number: 5 (lower is better)
Translates to: PRGPTAEHGHCELTTESQSLWAA*PRFPLK
Trigger: CTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT...CTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGTGGGGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS TCA 90 bp CCGCACAGCGTGCCTCAGTTTCGCCACACTCAACGGCCATGGACCTaGGCCCATGAAGCTCAAACCACGGCCCCAGCACCCTCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: PHSVPQFRHTQRPWT*AHEAQTTAPAPSGD
Trigger: GTCACCTGAGGGTGCTGGGGCCGTGGTTTGAGCTTCATGGGCTCAGGTCCATGGCCGTTGAGTGTGGCGAAACTGAGGCACGCTGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS TCA 90 bp ATGGCTCCCTGCTCCCCCACGTATGCAAGCCCAGTGCAGCAGGGCTaGAGCAGCACCGACTTCAGGGTCACTCAGAGAAGCGTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: MAPCSPTYASPVQQG*SSTDFRVTQRSVRG
Trigger: GCCCCTGACGCTTCTCTGAGTGACCCTGAAGTCGGTGCTGCTTCAGCCCTGCTGCACTGGGCTTGCATACGTGGGGGAGCAGGGAGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591027.2
ENST00000592486.1
CDS-3UTR CAA 90 bp CAACACCTGGACTCAGAAGTGGACAGGCGAGTGCCTGCCCCGGGAGAGGAAGGACACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: QHLDSEVDRRVPAPGEEGHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...TCCTTCCTCTCCCGGGGCAGGCACTCGCCTGTCCACTTCTGAGTCCAGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp TTCAGACGGCCAGACACACACGAAAGCTTTATGTGCAGGGCCCAGCCTCTGGGCTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: FRRPDTHESFMCRAQPLGWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...GCCCAGAGGCTGGGCCCTGCACATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GGGGTCCAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGCTGGGGGCACAGGGTTaGTGGGCACCCCACCCAGAT +
Preference number: 5 (lower is better)
Translates to: GVQPGHWYLGQLLWQAPVLGAQG*WAPHPD
Trigger: ATCTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAG...CACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CGAGAGGTCAGCCTGAGGAGGCAGCCTCGGCTGCCGGTAATGCTGCCTGCTTCAAGTCCCCGAGTGAGCTaGCCAGCCGGGGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: REVSLRRQPRLPVMLPASSPRVS*PAGVFL
Trigger: TAAGAAGACCCCGGCTGGCAAGCTCACTCGGGGACT...TGAAGCAGGCAGCATTACCGGCAGCCGAGGCTGCCTCCTCAGGCTGACCTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CAA 90 bp CTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTGGCGCCGTGGCTCACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: LLQSLEGDCWRQRASSPTGAVAH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGAGCCACGGCGCC...AGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS CCA 90 bp CAGTGTGGTCTCCCACGGACGAAGGCTCCACGTGCCGCACGGGTCTaGGCTGATCAAATCACCTCTGTCATCACCTTCCGGGGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: QCGLPRTKAPRAARV*ADQITSVITFRGQD
Trigger: ATCCTGGCCCCGGAAGGTGATGACAGAGGTGATTTGATCAGCCCAGACCCGTGCGGCACGTGGAGCCTTCGTCCGTGGGAGACCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CAA 90 bp CAACCTGGGCATTGGTACCTGGGCCAGTTATTATGGCAGGCCCCAGTGTGGGGCACGCGCTTCTTTGCCTaGGAGCCCATCTCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: QPGHWYLGQLLWQAPVWGTRFFA*EPISGR
Trigger: GCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...GCCCCACACTGGGGCCTGCCATAATAACTGGCCCAGGTACCAATGCCCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp CTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: LLQSLEGDCWRQRASSPTAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...AGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CAA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS TCA 90 bp CCTGAACCACAGCGCCCGGCCTCCACCCCTGTCAGAAGAACCCTCTaGAAATCGGTCCCACTCTACGGAGGAGTAGAGGGAGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: PEPQRPASTPVRRTL*KSVPLYGGVEGDSE
Trigger: CTCCGAGTCTCCCTCTACTCCTCCGTAGAGTGGGACCGATTTTCAGAGGGTTCTTCTGACAGGGGTGGAGGCCGGGCGCTGTGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589421.1
CDS-3UTR CAA 90 bp CCTGGTGACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGACGCGCTTCTTTGCCTaGGAGCCCATCTCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: PGDSHIQQKLRMAPCSPTTRFFA*EPISGR
Trigger: GCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...CGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CAA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATTGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS CCA 90 bp GGGCTGATCAAATCACCTCTGTCATCACCTGCTTTAGCAACAGGGTaGGAAAGGCCGGGCAGTGCCTGGATGAAGGCACAGGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GLIKSPLSSPALATG*ERPGSAWMKAQEAP
Trigger: GGGGGCCTCCTGTGCCTTCATCCAGGCACTGCCCGGCCTTTCCCACCCTGTTGCTAAAGCAGGTGATGACAGAGGTGATTTGATCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS-3UTR CAA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: PSLWAALPRFPLKLLFRMRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...CATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGACGCGCTTCTTTGCCTaGGAGCCCATCTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRTRFFA*EPISEG
Trigger: GCCTTCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000588849.1
CDS-3UTR CAA 90 bp CTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCGGCGAGCTCTCCGACTaGGGAGGAAATCAAGTTGAA +
Preference number: 5 (lower is better)
Translates to: LEGDCWRQRASSPTWEEIGELSD*GGNQVE
Trigger: TTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCC...GATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS CCA 90 bp CAGTGTGGTCTCCCACGGACGAAGGCTCCACGTGCCGCACGGGTCTaGGCTGATCAAATCACCTCTGTCATCACCTGCTTTAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: QCGLPRTKAPRAARV*ADQITSVITCFSNR
Trigger: CCTGTTGCTAAAGCAGGTGATGACAGAGGTGATTTGATCAGCCCAGACCCGTGCGGCACGTGGAGCCTTCGTCCGTGGGAGACCACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS-3UTR CAA 90 bp CAGCGGGCGAGCTCTCCGACTTGGGAGGAAATCAAGTTGAACAGCTCACTGCTTACGCGCTTCTTTGCCTaGGAGCCCATCTCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: QRASSPTWEEIKLNSSLLTRFFA*EPISGR
Trigger: GCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...AAGCAGTGAGCTGTTCAACTTGATTTCCTCCCAAGTCGGAGAGCTCGCCCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CAA 90 bp GGAGCCGCTCACAGAGGCACCATTCAGACGGCCAGACACACACGAAAGCTTTATCACGTAGGCCCGGCTTaGCTGGTAGAGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GAAHRGTIQTARHTRKLYHVGPA*LVELLS
Trigger: GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTG...ATAAAGCTTTCGTGTGTGTCTGGCCGTCTGAATGGTGCCTCTGTGAGCGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAATGGGTGCAGGCCACCTaGTGCGCTGCCCAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKWVQAT*CAAQAC
Trigger: GCAGGCTTGGGCAGCGCACAAGGTGGCCTGCACCCA...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGAAGATCAACGTGGCTaGTGGGAGGAGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIEDQRG*WEEPGA
Trigger: GGCCCCGGGCTCCTCCCACAAGCCACGTTGATCTTC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CAGTGCCCGGCAGGACTGAGCAGGGTTCCCGGGGTCGCCGGTACCCATCCCTCCAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QCPAGLSRVPGVAGTHPSRFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...GGAGGGATGGGTACCGGCGACCCCGGGAACCCTGCTCAGTCCTGCCGGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS TCA 90 bp ATCTGTGGTCCCTACTTCTCTGGAGGCAGAGGCAGGAGGATCGCTTaGGACTGGGAGGCCGAGGCTGCAATAAGCTATGATCGTGCCACG +
Preference number: 5 (lower is better)
Translates to: ICGPYFSGGRGRRIA*DWEAEAAISYDRAT
Trigger: CGTGGCACGATCATAGCTTATTGCAGCCTCGGCCTCCCAGTCTCAAGCGATCCTCCTGCCTCTGCCTCCAGAGAAGTAGGGACCACAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS-3UTR CAA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCACGCGCTTCTTTGCCTaGGAGCCCATCTCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: ALTLGGHSLDGITVNTSITRFFA*EPISGR
Trigger: GCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588871.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GGTGACTCCCACATTCAGCAGAAACTACGTATGGCTCCCTGCTCCCCCACGTATGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: GDSHIQQKLRMAPCSPTYAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...ATACGTGGGGGAGCAGGGAGCCATACGTAGTTTCTGCTGAATGTGGGAGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS-3UTR CAA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CAGTGGCTGGGAGACACCCGTGCCGTGGAGCTAGGCCCAGCCTGGCTGGGTCTCAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QWLGDTRAVELGPAWLGLRFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...GAGACCCAGCCAGGCTGGGCCTAGCTCCACGGCACGGGTGTCTCCCAGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp AGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGATGAAACTGGGGGCACAGGGTTaGTGGGCACCCCACCCAGAT +
Preference number: 5 (lower is better)
Translates to: SLWAALPRFPLKLLFRMKLGAQG*WAPHPD
Trigger: ATCTGGGTGGGGTGCCCACAAACCCTGTGCCCCCAG...TTTCATCCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GCTCTGACATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: ALTLGGHSLDGITVNTSIAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...GATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATGTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588849.1
ENST00000588871.5
ENST00000651077.1
CDS-3UTR CAA 90 bp CTGGTTGGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCTGCTCTCCCGGGGCAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LVGSHVGPALLVELLSRGRFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...GCCCCGGGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CAA 90 bp CATTGGGTGGGCACTCGCTGGATGGAATCACAGTTAACACCTCGATCCCAACACGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTC +
Preference number: 5 (lower is better)
Translates to: HWVGTRWMESQLTPRSQHAARAS*PWSPSL
Trigger: GAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...GTGTTGGGATCGAGGTGTTAACTGTGATTCCATCCAGCGAGTGCCCACCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592872.5
CDS-3UTR CAA 90 bp GGGATGCTTCTTCAGTCACTGGAAGGAGACTGCTGGCGGCAGCGGGCGAGCTCTTGGGAGGAAATCAAGTaGAACAGCTCACTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: GMLLQSLEGDCWRQRASSWEEIK*NSSLLS
Trigger: GCTAAGCAGTGAGCTGTTCAACTTGATTTCCTCCCA...AGAGCTCGCCCGCTGCCGCCAGCAGTCTCCTTCCAGTGACTGAAGAAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS-3UTR CAA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATCGGGCTGCTCTGACATaGGGTGGGCACTCGCTGGAT +
Preference number: 5 (lower is better)
Translates to: TAEHGHCELTTESQYSNNRAALT*GGHSLD
Trigger: ATCCAGCGAGTGCCCACCCAATGTCAGAGCAGCCCG...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000590621.1
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp AGCTCACACCTCTGCCTCAGCACGTTGCCCGCCTGCTGCAGCCGCTGGTTGGCAAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SSHLCLSTLPACCSRWLARFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...TGCCAACCAGCGGCTGCAGCAGGCGGGCAACGTGCTGAGGCAGAGGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS-3UTR CAA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGCAGCACGCGCTTCTTaGCCTTGGAGCCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: TAEHGHCELTTESQYSNNAARAS*PWSPSL
Trigger: CAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGC...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000588849.1
ENST00000588871.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCACGCGCTTCTTTGCCTaGGAGCCCATCTCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: AEHGHCELTTESQYSNNVTRFFA*EPISLP
Trigger: AGGCAGAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592872.5
CDS-3UTR CAA 90 bp ACTGCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATACGCGCTTCTTTGCCTaGGAGCCCATCTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: TAEHGHCELTTESQYSNNTRFFA*EPISEG
Trigger: GCCTTCAGAGATGGGCTCCAAGGCAAAGAAGCGCGT...ATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436106.3
ENST00000588849.1
CDS-3UTR CAA 90 bp AAGCAGAGCCAGAAAGCAGAAACTGGGGGCACAGGGTTTGTGGGCACCCCACCCAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: KQSQKAETGGTGFVGTPPRFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...GGGTGGGGTGCCCACAAACCCTGTGCCCCCAGTTTCTGCTTTCTGGCTCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000588871.5
CDS-3UTR CAA 90 bp GGGCCCAGCCTCTGGGCCGCCTTGCCCAGGTTTCCACTCAAGTTGCTATTTAGGAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: GPSLWAALPRFPLKLLFRRFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...CCTAAATAGCAACTTGAGTGGAAACCTGGGCAAGGCGGCCCAGAGGCTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS-3UTR CAA 90 bp GCAGAGCACGGCCACTGTGAGCTGACGACAGAATCACAGTACAGCAATAATGTCAGGTTTCCACTCAAGTaGCTATTTAGGATGAAAAGC +
Preference number: 5 (lower is better)
Translates to: AEHGHCELTTESQYSNNVRFPLK*LFRMKS
Trigger: GCTTTTCATCCTAAATAGCAACTTGAGTGGAAACCT...GACATTATTGCTGTACTGTGATTCTGTCGTCAGCTCACAGTGGCCGTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000427685.2
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588849.1
ENST00000588871.5
ENST00000592872.5
ENST00000651077.1
CDS GCA 72 bp GGGCGCTGGGCGGGTGGGCAGCAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCTGGGCGCGGGACCCGAAA +
Preference number: 6 (lower is better)
Translates to: GRWAGGQQHALL*LGAHLWARDPK
Trigger: TTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588427.5
ENST00000588871.5
ENST00000591027.2
ENST00000592605.1
ENST00000651077.1
CDS GCA 72 bp GGGCGCTGGGCGGGTGGGCAGCAGCACGCGCTTCTTTaGCTTGGAGCCCATCTCCCAGTCGCCGGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GRWAGGQQHALL*LGAHLPVAGLF
Trigger: GAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586564.5
CDS CAA 72 bp GCTGGGCGGGTGGGCAGCAGCACGCGCTTCTTTGCCTaGGAGCCCATCTCTGGGCGCGGGACCCGAAAGCCC +
Preference number: 6 (lower is better)
Translates to: AGRVGSSTRFFA*EPISGRGTRKP
Trigger: GGGCTTTCGGGTCCCGCGCCCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427685.2
ENST00000585675.6
ENST00000588427.5
ENST00000588871.5
ENST00000591027.2
ENST00000592605.1
ENST00000651077.1
CDS CCA 72 bp GCAGCCTCGGGTTGCCCGCCTGCTGCAGCCGCTGGTTaGCAGCCACGTAGGCCCGGCTTTGCTGGTAGAGCT +
Preference number: 6 (lower is better)
Translates to: AASGCPPAAAAG*QPRRPGFAGRA
Trigger: AGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCGGCTGCAGCAGGCGGGCAACCCGAGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588871.5
CDS CAA 72 bp GCTGGGCGGGTGGGCAGCAGCACGCGCTTCTTTGCCTaGGAGCCCATCTCTGAAGGCGGGGAAGGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: AGRVGSSTRFFA*EPISEGGEGGA
Trigger: AGCGCCCCCTTCCCCGCCTTCAGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436106.3
CDS CAA 72 bp GCTGGGCGGGTGGGCAGCAGCACGCGCTTCTTTGCCTaGGAGCCCATCTCCCAGTCGCCGGCCTCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: AGRVGSSTRFFA*EPISQSPASSH
Trigger: GTGGGAAGAGGCCGGCGACTGGGAGATGGGCTCCAAGGCAAAGAAGCGCGTGCTGCTGCCCACCCGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586564.5
CDS GCA 72 bp CCCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: PFRGQDGEHWIL*RRTPHILQDLL
Trigger: GAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592605.1
CDS CCA 72 bp ACGGACCGTGCCCATGTTGCGGGGGTTCCCAGGGCGTaGGGTCAGGAGTTAGGGGTGTGCTTCTCTCCCGTC +
Preference number: 6 (lower is better)
Translates to: TDRAHVAGVPRA*GQELGVCFSPV
Trigger: GACGGGAGAGAAGCACACCCCTAACTCCTGACCCCACGCCCTGGGAACCCCCGCAACATGGGCACGGTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589421.1
CDS GCA 72 bp ACCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: TFRGQDGEHWIL*RRTPHILQDLL
Trigger: GAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427685.2
ENST00000589421.1
ENST00000591027.2
CDS GCA 72 bp GTCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: VFRGQDGEHWIL*RRTPHILQDLL
Trigger: GAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000436106.3
ENST00000585675.6
ENST00000586564.5
ENST00000588871.5
ENST00000592872.5
CDS GCA 72 bp TCCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: SFRGQDGEHWIL*RRTPHILQDLL
Trigger: GAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590621.1
CDS GCA 72 bp CTCTTCCGGGGCCAGGATGGTGAACACTGGATCCTCTaGCGGCGCACCCCGCACATCCTCCAGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: LFRGQDGEHWIL*RRTPHILQDLL
Trigger: GAGCAGATCCTGGAGGATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588849.1
ENST00000651077.1
CDS TCA 72 bp TCCGCATCCTCCATCATCCTTCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCGGCGCACCCCGCACAT +
Preference number: 6 (lower is better)
Translates to: SASSIILPGPGW*TLDPLPAHPAH
Trigger: ATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGATGATGGAGGATGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590621.1
CDS GCA 72 bp GGAGTCGGAGCCTGCAGTGAGTCGAGATCTCGCCACTaGACTCCAGCCTTCCGGGGCCAGGATGGTGAACAC +
Preference number: 6 (lower is better)
Translates to: GVGACSESRSRH*TPAFRGQDGEH
Trigger: GTGTTCACCATCCTGGCCCCGGAAGGCTGGAGTGCAGTGGCGAGATCTCGACTCACTGCAGGCTCCGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS TCA 72 bp GTGCCTCAGTTTCGCCACACTCAACGGCCATGGACCTaGGCCCATGAAGCTCAAACCACGGCCCCAGCACCC +
Preference number: 6 (lower is better)
Translates to: VPQFRHTQRPWT*AHEAQTTAPAP
Trigger: GGGTGCTGGGGCCGTGGTTTGAGCTTCATGGGCTCAGGTCCATGGCCGTTGAGTGTGGCGAAACTGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS TCA 72 bp ACGGACGAAGGCTCCACGTGCCGCACGGGTCTGGGCTaGTCAAATCACCTCTGTCATCACCTTCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: TDEGSTCRTGLG*SNHLCHHLPGP
Trigger: TGGCCCCGGAAGGTGATGACAGAGGTGATTTGATCAGCCCAGACCCGTGCGGCACGTGGAGCCTTCGTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS TCA 72 bp AATCACCTCTGTCATCACCTTCCGGGGCCAGGATGGTaGACACTGGATCCTCTGCCGGCGCACCCCGCACAT +
Preference number: 6 (lower is better)
Translates to: NHLCHHLPGPGW*TLDPLPAHPAH
Trigger: ATGTGCGGGGTGCGCCGGCAGAGGATCCAGTGTTCACCATCCTGGCCCCGGAAGGTGATGACAGAGGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591027.2
CDS TCA 72 bp CAGCGCCCGGCCTCCACCCCTGTCAGAAGAACCCTCTaGAAATCGGTCCCACTCTACGGAGGAGTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: QRPASTPVRRTL*KSVPLYGGVEG
Trigger: TCCCTCTACTCCTCCGTAGAGTGGGACCGATTTTCAGAGGGTTCTTCTGACAGGGGTGGAGGCCGGGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589421.1
CDS TCA 72 bp GGAGAATCGCTTGAACTGGGGAGTCGGAGCCTGCAGTaGGTCGAGATCTCGCCACTGCACTCCAGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: GESLELGSRSLQ*VEISPLHSSLP
Trigger: CGGAAGGCTGGAGTGCAGTGGCGAGATCTCGACTCACTGCAGGCTCCGACTCCCCAGTTCAAGCGATTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588427.5
CDS GCA 72 bp ACCTGCTTTAGCAACAGGGTGGGAAAGGCCGGGCAGTaGCTGGATGAAGGCACAGGAGGCCCCCTACCTTCT +
Preference number: 6 (lower is better)
Translates to: TCFSNRVGKAGQ*LDEGTGGPLPS
Trigger: AGAAGGTAGGGGGCCTCCTGTGCCTTCATCCAGGCACTGCCCGGCCTTTCCCACCCTGTTGCTAAAGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS GCA 72 bp CGGGTCTGGGCTGATCAAATCACCTCTGTCATCACCTaGTTTAGCAACAGGGTGGGAAAGGCCGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: RVWADQITSVIT*FSNRVGKAGQC
Trigger: GCACTGCCCGGCCTTTCCCACCCTGTTGCTAAAGCAGGTGATGACAGAGGTGATTTGATCAGCCCAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592486.1
CDS CCA 72 bp AAATCACCTCTGTCATCACCTGCTTTAGCAACAGGGTaGGAAAGGCCGGGCAGTGCCTGGATGAAGGCACAG +
Preference number: 6 (lower is better)
Translates to: KSPLSSPALATG*ERPGSAWMKAQ
Trigger: CTGTGCCTTCATCCAGGCACTGCCCGGCCTTTCCCACCCTGTTGCTAAAGCAGGTGATGACAGAGGTGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592486.1