Pregenerated sensors for C19ORF18 (Homo sapiens)
Ensembl gene IDs: ENSG00000177025Ensembl transcript IDs: ENST00000314391.3
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCCTCGAGGCAGCCCCTTaGATCCCAGGCAACTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSSIRFSGSKPRPQAQSPLEAAP*IPGNWV Trigger: AACCCAGTTGCCTGGGATTCAAGGGGCTGCCTCGAG...GGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | TCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCCTCACCCTCGTCCTCTaGGCCCTCTTCTTCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSSIRFSGSKPRPQAQSPLTLVL*ALFFIS Trigger: GGAGATGAAGAAGAGGGCTCAGAGGACGAGGGTGAG...GGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CCA 90 bp | TTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCACCTGGAAGTAGGTGCGTaGACTCACCCTCGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FHKVLWEQATPTGSVSQHLEVGA*THPRPL Trigger: CAGAGGACGAGGGTGAGTCCACGCACCTACTTCCAG...GTGCTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CCA 90 bp | TTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCACTTCCATAAGGTTCTCTaGGAGCAAGCCACGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: FHKVLWEQATPTGSVSQHFHKVL*EQATPT Trigger: TGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAA...GTGCTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | TTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCACCTTTGGGCTCTTTGGTaGTGTTTCTGGGTGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: FHKVLWEQATPTGSVSQHLWALW*CFWVVV Trigger: CACAACCACCCAGAAACATCACCAAAGAGCCCAAAG...GTGCTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCGGCACCTCTGTCGTCTaGGTTCACAAGTCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: VLFHKVLWEQATPTGSVSGTSVV*VHKSSI Trigger: AATGGAAGACTTGTGAACGCAGACGACAGAGGTGCC...GGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCATGTTTCCAGTGGGATaGAGTCCATCTGCATACGGC | + |
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Preference number: 4 (lower is better) Translates to: VLFHKVLWEQATPTGSVSMFPVG*SPSAYG Trigger: GCCGTATGCAGATGGACTCCATCCCACTGGAAACAT...GGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | GTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCATGAGGAAACCACTCTaGACCTTGTCCATCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: VLFHKVLWEQATPTGSVSMRKPL*TLSITL Trigger: GAGAGTGATGGACAAGGTTCAGAGTGGTTTCCTCAT...GGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | TTTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCATTCTCTGGAAGTAGGTaGGTGGACTCACCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: FDVLFHKVLWEQATPTGSFSGSR*VDSPSS Trigger: GGACGAGGGTGAGTCCACGCACCTACTTCCAGAGAA...TGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | TCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCGAGGTTCTTATAAAGTaGCTCGAGCTGTTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSIRFSGSKPRPQAQSPEVLIK*LELLSF Trigger: GAAAGACAACAGCTCGAGTCACTTTATAAGAACCTC...GGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | TTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCACTATCATATAGGAGATTaGCATCCCACATATCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FHKVLWEQATPTGSVSQHYHIGD*HPTYQG Trigger: GCCCTGATATGTGGGATGGCAATCTCCTATATGATA...GTGCTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGATATCAGGGCAATGCTaGAGGCTACGCTCGAAATTA | + |
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Preference number: 4 (lower is better) Translates to: LMSSSIRFSGSKPRPQAQISGQC*RLRSKL Trigger: TAATTTCGAGCGTAGCCTTCAGCATTGCCCTGATAT...CTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | CTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGTCTTTCCTCAGCCTGTaGCAGTCGATATATCATATA | + |
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Preference number: 4 (lower is better) Translates to: LFHKVLWEQATPTGSVSQSFLSL*QSIYHI Trigger: TATATGATATATCGACTGGCACAGGCTGAGGAAAGA...CTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CCA 90 bp | TTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCACTGTGGCTTTATTTTCTaGGATACAGGTCTGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: FHKVLWEQATPTGSVSQHCGFIF*DTGLAF Trigger: AAATGCCAGACCTGTATCCCAGAAAATAAAGCCACA...GTGCTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | CTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCTAATAACGGTATCCTaGGGTTCTTATAAAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: LFHKVLWEQATPTGSVSQLITVS*GSYKVT Trigger: AGTCACTTTATAAGAACCTCAGGATACCGTTATTAG...CTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | TTTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTTGTGACCGTTTACTaGCTGGTAAGCCTGTTATGT | + |
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Preference number: 4 (lower is better) Translates to: FDVLFHKVLWEQATPTGSVVTVY*LVSLLC Trigger: ACATAACAGGCTTACCAGGCAGTAAACGGTCACAAC...TGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCTCTGTTACTGAGTTTTaGTCTTCCTTCAGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VLFHKVLWEQATPTGSVSSVTEF*SSFSFF Trigger: GAAGAAACTGAAGGAAGAGCAAAACTCAGTAACAGA...GGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CCA 90 bp | TTTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCACTGTTATGTTTCCAGTaGGATGGAGTCCATCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FDVLFHKVLWEQATPTGSLLCFQ*DGVHLH Trigger: ATGCAGATGGACTCCATCCCACTGGAAACATAACAG...TGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCGATATAATAACTGAGTaGATGAACTTTTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VLFHKVLWEQATPTGSVSDIITE*MNFSSS Trigger: TGAGCTGGAAAAGTTCATCCACTCAGTTATTATATC...GGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR GCA 90 bp | TTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGACAAGAGCAGGTCTATaGCGAATTATTGCTTTATTC | + |
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Preference number: 4 (lower is better) Translates to: LMSSSIRFSGSKPRPQAQTRAGL*RIIALF Trigger: GAATAAAGCAATAATTCGGCATAGACCTGCTCTTGT...CTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR TCA 90 bp | TTTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCATGTCCTCTATTTATCTaGGGAATCAAGAAGTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: FDVLFHKVLWEQATPTGSCPLFI*GIKKFY Trigger: GTAGAACTTCTTGATTCCTCAGATAAATAGAGGACA...TGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CAA 90 bp | TTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCGAGGCAGCCCCTaGAATCCCAGGCAACTGGGT | + |
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Preference number: 5 (lower is better) Translates to: LMSSSIRFSGSKPRPQAQSRGSP*NPRQLG Trigger: ACCCAGTTGCCTGGGATTCAAGGGGCTGCCTCGAGA...CTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CAA 90 bp | TTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGAACACTTTGGGCTCTTaGGTGATGTTTCTGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LMSSSIRFSGSKPRPQAQNTLGS*VMFLGG Trigger: ACCACCCAGAAACATCACCAAAGAGCCCAAAGTGTT...CTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CAA 90 bp | TCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCAGCATATCATATAGGAGATaGCCATCCCACATATCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSIRFSGSKPRPQAQSPSISYRR*PSHISG Trigger: CCCTGATATGTGGGATGGCAATCTCCTATATGATAT...GCTGGGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CAA 90 bp | GTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGTCTCCCTGGCATTTCTTTCTTaGATGTCCTCTTCCATAAGG | + |
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Preference number: 5 (lower is better) Translates to: VLFHKVLWEQATPTGSVSLAFLS*MSSSIR Trigger: CCTTATGGAAGAGGACATCAAAGAAAGAAATGCCAG...GGAGACTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS GCA 90 bp | GAGTGGATGAACTTTTCCAGCTCATTTTCGTTCTCTGGAAGTAGGTaGGTGGACTCACCCTCGTCCTCTGAGCCCTCTTCTTCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: EWMNFSSSFSFSGSR*VDSPSSSEPSSSSP Trigger: AGGAGATGAAGAAGAGGGCTCAGAGGACGAGGGTGAGTCCACGCACCTACTTCCAGAGAACGAAAATGAGCTGGAAAAGTTCATCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS GCA 90 bp | CACCCCCATAGTTTCTCCTCTGCCTCAGCCGGCACCTCTGTCGTCTaGGTTCACAAGTCTTCCATTTTTCCATTATGTGACGCATTCTTT | + |
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Preference number: 5 (lower is better) Translates to: HPHSFSSASAGTSVV*VHKSSIFPLCDAFF Trigger: AAAGAATGCGTCACATAATGGAAAAATGGAAGACTTGTGAACGCAGACGACAGAGGTGCCGGCTGAGGCAGAGGAGAAACTATGGGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS CCA 90 bp | GTGGTTGTGACCGTTTACTGCCTGGTAAGCCTGTTATGTTTCCAGTaGGATGGAGTCCATCTGCATACGGCAAGCATAAATGAAGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: VVVTVYCLVSLLCFQ*DGVHLHTASINEVG Trigger: GCCAACTTCATTTATGCTTGCCGTATGCAGATGGACTCCATCCCACTGGAAACATAACAGGCTTACCAGGCAGTAAACGGTCACAACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS-3UTR CAA 90 bp | TTGATGTCCTCTTCCATAAGGTTCTCTGGGAGCAAGCCACGCCCACAGGCTCAGGTCTATGCCGAATTATaGCTTTATTCCTCAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: LMSSSIRFSGSKPRPQAQVYAEL*LYSSGI Trigger: AATTCCTGAGGAATAAAGCAATAATTCGGCATAGAC...CTGAGCCTGTGGGCGTGGCTTGCTCCCAGAGAACCTTATGGAAGAGGACATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS GCA 72 bp | AACTTTTCCAGCTCATTTTCGTTCTCTGGAAGTAGGTaGGTGGACTCACCCTCGTCCTCTGAGCCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: NFSSSFSFSGSR*VDSPSSSEPSS Trigger: AGAAGAGGGCTCAGAGGACGAGGGTGAGTCCACGCACCTACTTCCAGAGAACGAAAATGAGCTGGAAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS CCA 72 bp | TTTCCAGCTCATTTTCGTTCTCTGGAAGTAGGTGCGTaGACTCACCCTCGTCCTCTGAGCCCTCTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: FPAHFRSLEVGA*THPRPLSPLLH Trigger: ATGAAGAAGAGGGCTCAGAGGACGAGGGTGAGTCCACGCACCTACTTCCAGAGAACGAAAATGAGCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS GCA 72 bp | CTCAGCCTGTGCCAGTCGATATATCATATAGGAGATTaGCATCCCACATATCAGGGCAATGCTGAAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LSLCQSIYHIGD*HPTYQGNAEGY Trigger: GTAGCCTTCAGCATTGCCCTGATATGTGGGATGGCAATCTCCTATATGATATATCGACTGGCACAGGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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| CDS CCA 72 bp | ACCGTTTACTGCCTGGTAAGCCTGTTATGTTTCCAGTaGGATGGAGTCCATCTGCATACGGCAAGCATAAAT | + |
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Preference number: 6 (lower is better) Translates to: TVYCLVSLLCFQ*DGVHLHTASIN Trigger: ATTTATGCTTGCCGTATGCAGATGGACTCCATCCCACTGGAAACATAACAGGCTTACCAGGCAGTAAACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314391.3 |
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