RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C18ORF32 (Homo sapiens)

Ensembl gene IDs: ENSG00000177576

Ensembl transcript IDs: ENST00000318240.8, ENST00000582392.2, ENST00000613385.4

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGAGTGTTCCTTGAGGCACAGTGACTTCTGGCTGAGGAACAGTTaGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACAC +
Preference number: 1 (lower is better)
Translates to: LECSLRHSDFWLRNS*PEVTLQREGQGNKH
Trigger: GTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCAGAAGTCACTGTGCCTCAAGGAACACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 90 bp GAACCCAGAGACATGGGAAGTCTGTTGATGTCTATACAGCTTCCTTaGGCTGAAAGCAGGATGAGGGGAGCAGAGACTTGGGAGGGGCAA +
Preference number: 1 (lower is better)
Translates to: EPRDMGSLLMSIQLP*AESRMRGAETWEGQ
Trigger: TTGCCCCTCCCAAGTCTCTGCTCCCCTCATCCTGCTTTCAGCCCAAGGAAGCTGTATAGACATCAACAGACTTCCCATGTCTCTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 90 bp GCAGTGTGCACCAGGTCTAGGCAACAACTAGGCAGGAGAGGTGTATaGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTAT +
Preference number: 1 (lower is better)
Translates to: AVCTRSRQQLGRRGV*GEGKLVTPGRHHLY
Trigger: ATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCTGCCTAGTTGTTGCCTAGACCTGGTGCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR GCA 90 bp CCAGGCCCAGCCAGCCATATGAGTGAGCCCAGAACAGCAAAGAACTaGCCAGTCGAGTCACTGCTGCTGAAAACCACTAAATTTTGGAGT +
Preference number: 1 (lower is better)
Translates to: PGPASHMSEPRTAKN*PVESLLLKTTKFWS
Trigger: ACTCCAAAATTTAGTGGTTTTCAGCAGCAGTGACTCGACTGGGCAGTTCTTTGCTGTTCTGGGCTCACTCATATGGCTGGCTGGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 90 bp GAAGAGGATAGGAAATCCAGAAACAAGACGTCCAATACAGGAGGGTaGCAACAGAAAGTCCCGAGGACTGCAGTGTGCACCAGGTCTAGG +
Preference number: 1 (lower is better)
Translates to: EEDRKSRNKTSNTGG*QQKVPRTAVCTRSR
Trigger: CCTAGACCTGGTGCACACTGCAGTCCTCGGGACTTTCTGTTGCCACCCTCCTGTATTGGACGTCTTGTTTCTGGATTTCCTATCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR GCA 90 bp GTTGCTAGAAGGTTACACACAAAATCAACTGGGGCGGACTCTGGATaGACTGCCTATGAATTAGCCTTGCTCCACAAGGAGCAGCACTGT +
Preference number: 1 (lower is better)
Translates to: VARRLHTKSTGADSG*TAYELALLHKEQHC
Trigger: ACAGTGCTGCTCCTTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCAGAGTCCGCCCCAGTTGATTTTGTGTGTAACCTTCTAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 90 bp CATGCTATGAACACTGATGATGTAAGCAAAATTTACAAAAGCACTTaGGAGGATGTGTGGGAGGAGCAGAGGCAGTGTAAGATAGCGGCA +
Preference number: 1 (lower is better)
Translates to: HAMNTDDVSKIYKST*EDVWEEQRQCKIAA
Trigger: TGCCGCTATCTTACACTGCCTCTGCTCCTCCCACACATCCTCCCAAGTGCTTTTGTAAATTTTGCTTACATCATCAGTGTTCATAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 90 bp AGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTaGAAAACAGGCTTAAATAAATTGGAATCATCCCGGGGACACTTT +
Preference number: 1 (lower is better)
Translates to: RLVRNEKGLRRPAAL*KTGLNKLESSRGHF
Trigger: AAAGTGTCCCCGGGATGATTCCAATTTATTTAAGCCTGTTTTCCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR TCA 90 bp TTGACTGTATTTCAGGTTTATGCAGACCAGGTAGGTTTGTGTGTGTaGAACACCCATGAACAGTGCAGGTACAATGTGTTTAACAAAGGG +
Preference number: 1 (lower is better)
Translates to: LTVFQVYADQVGLCV*NTHEQCRYNVFNKG
Trigger: CCCTTTGTTAAACACATTGTACCTGCACTGTTCATGGGTGTTTCACACACACAAACCTACCTGGTCTGCATAAACCTGAAATACAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR GCA 90 bp TCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATaGCATCACAACATCCAAATTCTGCCTTCTGACGTGGTGAAAAAT +
Preference number: 1 (lower is better)
Translates to: SCYATIVIVVPPLHR*HHNIQILPSDVVKN
Trigger: ATTTTTCACCACGTCAGAAGGCAGAATTTGGATGTTGTGATGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGACAGCTTCCTTGGGCTaGAAGCAGGATGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQTASLG*KQDEGS
Trigger: GCTCCCCTCATCCTGCTTTCAGCCCAAGGAAGCTGT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGGCCCAGCCAGCCATATaGGTGAGCCCAGAACAGCAA +
Preference number: 2 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLAQPAI*VSPEQQ
Trigger: TTGCTGTTCTGGGCTCACTCATATGGCTGGCTGGGC...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGACACTTTGGGAGGCTaGGGCAAGAGGATCACTTTG +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQDTLGG*GKRITL
Trigger: CAAAGTGATCCTCTTGCCTCAGCCTCCCAAAGTGTC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGCCCAGCCAGCCATATaGGTGAGCCCAGAACAGCAA +
Preference number: 2 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWAQPAI*VSPEQQ
Trigger: TTGCTGTTCTGGGCTCACTCATATGGCTGGCTGGGC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGCCCAAGGTAAATCAGTaGCTTGACCAGCCACAGAAC +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQPKVNQ*LDQPQN
Trigger: GTTCTGTGGCTGGTCAAGTCACTGATTTACCTTGGG...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGCTTGAGAGGCTAAGGTaGGAGGATCACTTCAGGACT +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQLERLR*EDHFRT
Trigger: AGTCCTGAAGTGATCCTCTCACCTTAGCCTCTCAAG...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGTAGTCCCAGCTACTTaGGAGGCTAAGGTGAGAGGA +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFVVPAT*EAKVRG
Trigger: TCCTCTCACCTTAGCCTCTCAAGTAGCTGGGACTAC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCGTAGTCCCAGCTACTTaGGAGGCTAAGGTGAGAGGA +
Preference number: 2 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSVVPAT*EAKVRG
Trigger: TCCTCTCACCTTAGCCTCTCAAGTAGCTGGGACTAC...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTTGAGGCCAGGAGTTTaGGACTCGCTTGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLLRPGV*DSLGQQ
Trigger: CTGTTGCCCAAGCGAGTCTCAAACTCCTGGCCTCAA...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGCTATGGATCGCTATTaGCCAAACCCAGCAGAACCC +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFAMDRY*PNPAEP
Trigger: GGGTTCTGCTGGGTTTGGCCAATAGCGATCCATAGC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGAAATACCACCACCCCTaGGCCCAAAAGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: VSNSILPGSVPASQIALLKYHHP*AQKGRV
Trigger: CACCCTGCCCTTTTGGGCCCAGGGGTGGTGGTATTT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 90 bp AGGCACAGTGACTTCTGGCTGAGGAACAGTTGGCCTGAGGTGACCTaGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCATTCTC +
Preference number: 2 (lower is better)
Translates to: RHSDFWLRNSWPEVT*QREGQGNKHSAFIL
Trigger: GAGAATGAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCAGAAGTCACTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGGAGGAACAGTTGGCCTaGGGTGACCTTGCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: VSNSILPGSVPASQIALLEEQLA*GDLAER
Trigger: TCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTC...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR GCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAACAGCAAAGAACTaGCCAGTCGAGTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSRTAKN*PVESLL
Trigger: CAGCAGTGACTCGACTGGGCAGTTCTTTGCTGTTCT...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGGAAGTCAGGTGGAGTTaGCTGCCTGGAGTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLEVRWS*LPGVFL
Trigger: AAGGAACACTCCAGGCAGCCAACTCCACCTGACTTC...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 90 bp CGCTATTGGCCAAACCCAGCAGAACCCAGAGACATGGGAAGTCTGTaGATGTCTATACAGCTTCCTTGGGCTGAAAGCAGGATGAGGGGA +
Preference number: 2 (lower is better)
Translates to: RYWPNPAEPRDMGSL*MSIQLPWAESRMRG
Trigger: TCCCCTCATCCTGCTTTCAGCCCAAGGAAGCTGTATAGACATCAACAGACTTCCCATGTCTCTGGGTTCTGCTGGGTTTGGCCAATAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGCTTGAGAGGCTAAGGTaGGAGGATCACTTCAGGACT +
Preference number: 2 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLLERLR*EDHFRT
Trigger: AGTCCTGAAGTGATCCTCTCACCTTAGCCTCTCAAG...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGACACTTTGGGAGGCTaGGGCAAGAGGATCACTTTG +
Preference number: 2 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWDTLGG*GKRITL
Trigger: CAAAGTGATCCTCTTGCCTCAGCCTCCCAAAGTGTC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGAGTTTGAGACTCGCTTaGGCAACAGAGCAAGACCCC +
Preference number: 2 (lower is better)
Translates to: VSNSILPGSVPASQIALLSLRLA*ATEQDP
Trigger: GGGGTCTTGCTCTGTTGCCCAAGCGAGTCTCAAACT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTCTATACAGCTTCCTTaGGCTGAAAGCAGGATGAGG +
Preference number: 2 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSSIQLP*AESRMR
Trigger: CCTCATCCTGCTTTCAGCCCAAGGAAGCTGTATAGA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTCGAGTCACTGCTGCTaGAAACCACTAAATTTTGGA +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQSSHCC*KPLNFG
Trigger: TCCAAAATTTAGTGGTTTTCAGCAGCAGTGACTCGA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGAACTTAATAGAGCCTaGGTTAGGACCCAGACTTCA +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFELNRA*VRTQTS
Trigger: TGAAGTCTGGGTCCTAACTCAGGCTCTATTAAGTTC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCATTTACAAAAGCACTTaGGAGGATGTGTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSIYKST*EDVWEE
Trigger: CTCCTCCCACACATCCTCCCAAGTGCTTTTGTAAAT...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 90 bp AATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTaGAGAGGAAGCAGTAGCCCAGAGCCAGTAACAGAAATACCACCA +
Preference number: 2 (lower is better)
Translates to: NSILPGSVPASQIAL*RGSSSPEPVTEIPP
Trigger: TGGTGGTATTTCTGTTACTGGCTCTGGGCTACTGCTTCCTCTCAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTGCCTTCTGACGTGGTaGAAAATTTCCCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQCLLTW*KISLLN
Trigger: ATTCAAAAGGGAAATTTTTCACCACGTCAGAAGGCA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTATAGGTCCCTACACTaGATTTTCAAAGCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQYRSLH*IFKAQD
Trigger: ATCTTGGGCTTTGAAAATTCAGTGTAGGGACCTATA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTTTGGACAGAAAAGCTaGGACCTGCTGATTTACATG +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFFGQKS*DLLIYM
Trigger: CATGTAAATCAGCAGGTCTCAGCTTTTCTGTCCAAA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACCTTGGGAGGGGCAAATaGAAGACACCTGGCACACTC +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDLGRGK*KTPGTL
Trigger: GAGTGTGCCAGGTGTCTTTCATTTGCCCCTCCCAAG...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR GCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCCCACCACTACACAGATaGCATCACAACATCCAAATT +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFPPLHR*HHNIQI
Trigger: AATTTGGATGTTGTGATGGCATCTGTGTAGTGGTGG...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR GCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCCCACCACTACACAGATaGCATCACAACATCCAAATT +
Preference number: 2 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSPPLHR*HHNIQI
Trigger: AATTTGGATGTTGTGATGGCATCTGTGTAGTGGTGG...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGATCTTATCCCTCAGGTaGCTTTGGACAGAAAAGCTG +
Preference number: 2 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLILSLR*LWTEKL
Trigger: CAGCTTTTCTGTCCAAAGCCACCTGAGGGATAAGAT...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTATAGGTCCCTACACTaGATTTTCAAAGCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFYRSLH*IFKAQD
Trigger: ATCTTGGGCTTTGAAAATTCAGTGTAGGGACCTATA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGCATCTCATCATCTTTaGATATTTATAGGTCCCTAC +
Preference number: 2 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQASHHL*IFIGPY
Trigger: GTAGGGACCTATAAATATTCAAAGATGATGAGATGC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGAACTTAATAGAGCCTaGGTTAGGACCCAGACTTCA +
Preference number: 2 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWELNRA*VRTQTS
Trigger: TGAAGTCTGGGTCCTAACTCAGGCTCTATTAAGTTC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTTGAGGCCAGGAGTTTaGGACTCGCTTGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPLRPGV*DSLGQQ
Trigger: CTGTTGCCCAAGCGAGTCTCAAACTCCTGGCCTCAA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTGAGGAACAGTTGGCCTaGGGTGACCTTGCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIEEQLA*GDLAER
Trigger: TCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTC...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGAATTGGTTACCTCTGTaGAGCTGGAATAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLNWLPL*SWNKGM
Trigger: CATTCCCTTATTCCAGCTCCACAGAGGTAACCAATT...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACAGTTTGAGACTCGCTTaGGCAACAGAGCAAGACCCC +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDSLRLA*ATEQDP
Trigger: GGGGTCTTGCTCTGTTGCCCAAGCGAGTCTCAAACT...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGATTTACAAAAGCACTTaGGAGGATGTGTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: VSNSILPGSVPASQIALLIYKST*EDVWEE
Trigger: CTCCTCCCACACATCCTCCCAAGTGCTTTTGTAAAT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTGGCTGAGGAACAGTTaGCCTGAGGTGACCTTGCAG +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIWLRNS*PEVTLQ
Trigger: CTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGAAGTCAGGTGGAGTTaGCTGCCTGGAGTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDEVRWS*LPGVFL
Trigger: AAGGAACACTCCAGGCAGCCAACTCCACCTGACTTC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 90 bp AGTATGAAAACAACGACTGGGAACCAGTGTTCTAGAGAGGGAGACTaGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SMKTTTGNQCSREGD*LEMRKALGDPQLSG
Trigger: TCCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCTCTAGAACACTGGTTCCCAGTCGTTGTTTTCATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 90 bp TGGGATTATAGGCTTGAGTCACCGCCTCCGGTGGATCCTGTTTTCTaGACTGTATTTCAGGTTTATGCAGACCAGGTAGGTTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: WDYRLESPPPVDPVF*TVFQVYADQVGLCV
Trigger: CACACACAAACCTACCTGGTCTGCATAAACCTGAAATACAGTCAAGAAAACAGGATCCACCGGAGGCGGTGACTCAAGCCTATAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTTACCTCTGTGGAGCTaGAATAAGGGAATGAGAGTT +
Preference number: 2 (lower is better)
Translates to: VSNSILPGSVPASQIALLLPLWS*NKGMRV
Trigger: AACTCTCATTCCCTTATTCCAGCTCCACAGAGGTAA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGCATCTCAACCATTATaGGAAACAATGTCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFASQPL*ETMSEV
Trigger: AACTTCAGACATTGTTTCCCATAATGGTTGAGATGC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTCCCAAGGTAAATCAGTaGCTTGACCAGCCACAGAAC +
Preference number: 2 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPPKVNQ*LDQPQN
Trigger: GTTCTGTGGCTGGTCAAGTCACTGATTTACCTTGGG...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACTGGATGCACTGCCTATaGATTAGCCTTGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDWMHCL*ISLAPQ
Trigger: TTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCA...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR GCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTAGAACAGCAAAGAACTaGCCAGTCGAGTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPRTAKN*PVESLL
Trigger: CAGCAGTGACTCGACTGGGCAGTTCTTTGCTGTTCT...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACTCTATACAGCTTCCTTaGGCTGAAAGCAGGATGAGG +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDSIQLP*AESRMR
Trigger: CCTCATCCTGCTTTCAGCCCAAGGAAGCTGTATAGA...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTGGATGCACTGCCTATaGATTAGCCTTGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIWMHCL*ISLAPQ
Trigger: TTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGGCTGCTCCACTGTGTTaGACAGTAATTATTAAATCT +
Preference number: 2 (lower is better)
Translates to: VSNSILPGSVPASQIALLAAPLC*TVIIKS
Trigger: AGATTTAATAATTACTGTCCAACACAGTGGAGCAGC...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACTCTAGACTCCTATCCTaGATTCCGGTCTCAGATAAA +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDSRLLS*IPVSDK
Trigger: TTTATCTGAGACCGGAATTCAGGATAGGAGTCTAGA...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 90 bp CCAGTCGAGTCACTGCTGCTGAAAACCACTAAATTTTGGAGTGTCTaGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATG +
Preference number: 2 (lower is better)
Translates to: PVESLLLKTTKFWSV*LRNNSNCCPTTTQM
Trigger: CATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACTCCAAAATTTAGTGGTTTTCAGCAGCAGTGACTCGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACTGCCTTCTGACGTGGTaGAAAATTTCCCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDCLLTW*KISLLN
Trigger: ATTCAAAAGGGAAATTTTTCACCACGTCAGAAGGCA...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTGGTAAATCAGTGACTTaGCCAGCCACAGAACTTAAT +
Preference number: 2 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPGKSVT*PATELN
Trigger: ATTAAGTTCTGTGGCTGGTCAAGTCACTGATTTACC...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTACATGGGAAGTCTGTTaGTGTCTATACAGCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCITWEVC*CLYSFL
Trigger: AAGGAAGCTGTATAGACATCAACAGACTTCCCATGT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTTACCTCTGTGGAGCTaGAATAAGGGAATGAGAGTT +
Preference number: 2 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPLPLWS*NKGMRV
Trigger: AACTCTCATTCCCTTATTCCAGCTCCACAGAGGTAA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCATCTAGACTCCTATCCTaGATTCCGGTCTCAGATAAA +
Preference number: 2 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPSRLLS*IPVSDK
Trigger: TTTATCTGAGACCGGAATTCAGGATAGGAGTCTAGA...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTGCATCTCATCATCTTTaGATATTTATAGGTCCCTAC +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIASHHL*IFIGPY
Trigger: GTAGGGACCTATAAATATTCAAAGATGATGAGATGC...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTGCTGCTCCACTGTGTTaGACAGTAATTATTAAATCT +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIAAPLC*TVIIKS
Trigger: AGATTTAATAATTACTGTCCAACACAGTGGAGCAGC...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTAAAACCACTAAATTTTaGAGTGTCTTGTTACGCAAC +
Preference number: 2 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPKTTKF*SVLLRN
Trigger: GTTGCGTAACAAGACACTCCAAAATTTAGTGGTTTT...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTAAAACCACTAAATTTTaGAGTGTCTTGTTACGCAAC +
Preference number: 2 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIKTTKF*SVLLRN
Trigger: GTTGCGTAACAAGACACTCCAAAATTTAGTGGTTTT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp TCCTTGAGGCACAGTGACTTCTGGCTGAGGAACAGTTaGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: SLRHSDFWLRNS*PEVTLQREGQG
Trigger: CCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCAGAAGTCACTGTGCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp GGCTGCCTGGAGTGTTCCTTGAGGCACAGTGACTTCTaGCTGAGGAACAGTTGGCCTGAGGTGACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: GCLECSLRHSDF*LRNSWPEVTLQ
Trigger: CTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCAGAAGTCACTGTGCCTCAAGGAACACTCCAGGCAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp TCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTaGCCAAACCCAGCAGAACCCAGAGACATGGGAAGT +
Preference number: 3 (lower is better)
Translates to: SSLQPSPAMDRY*PNPAEPRDMGS
Trigger: ACTTCCCATGTCTCTGGGTTCTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp TGCCTTCATTCTCCTCCCTCCAGCCATCTCCTGCTATaGATCGCTATTGGCCAAACCCAGCAGAACCCAGAG +
Preference number: 3 (lower is better)
Translates to: CLHSPPSSHLLL*IAIGQTQQNPE
Trigger: CTCTGGGTTCTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAATGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGCCTATGAATTAGCCTaGCTCCACAAGGAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFAYELA*LHKEQH
Trigger: GTGCTGCTCCTTGTGGAGCAAGGCTAATTCATAGGC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGAGAAGTCAGGTGGAGTaGGCTGCCTGGAGTGTTCCT +
Preference number: 3 (lower is better)
Translates to: VSNSILPGSVPASQIALLRSQVE*AAWSVP
Trigger: AGGAACACTCCAGGCAGCCAACTCCACCTGACTTCT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGAGAAGTCAGGTGGAGTaGGCTGCCTGGAGTGTTCCT +
Preference number: 3 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWRSQVE*AAWSVP
Trigger: AGGAACACTCCAGGCAGCCAACTCCACCTGACTTCT...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGATCCCTCAGGTGGCTTaGGACAGAAAAGCTGAGACC +
Preference number: 3 (lower is better)
Translates to: VSNSILPGSVPASQIALLIPQVA*DRKAET
Trigger: GGTCTCAGCTTTTCTGTCCAAAGCCACCTGAGGGAT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGAAAGTGGAGGATCGCTaGAGCCCAGGAGATCGAGAT +
Preference number: 3 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWKVEDR*SPGDRD
Trigger: ATCTCGATCTCCTGGGCTCAAGCGATCCTCCACTTT...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGACATGGGAAGTCTGTaGATGTCTATACAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQDMGSL*MSIQLP
Trigger: AGGAAGCTGTATAGACATCAACAGACTTCCCATGTC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTGGCCTGAGGTGACCTaGCAGAGAGAGGGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIWPEVT*QREGQG
Trigger: CCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR GCA 72 bp GCCAGCCATATGAGTGAGCCCAGAACAGCAAAGAACTaGCCAGTCGAGTCACTGCTGCTGAAAACCACTAAA +
Preference number: 3 (lower is better)
Translates to: ASHMSEPRTAKN*PVESLLLKTTK
Trigger: TTTAGTGGTTTTCAGCAGCAGTGACTCGACTGGGCAGTTCTTTGCTGTTCTGGGCTCACTCATATGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGGACATGGGAAGTCTGTaGATGTCTATACAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLDMGSL*MSIQLP
Trigger: AGGAAGCTGTATAGACATCAACAGACTTCCCATGTC...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR TCA 72 bp CAAACCCAGCAGAACCCAGAGACATGGGAAGTCTGTTaGTGTCTATACAGCTTCCTTGGGCTGAAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: QTQQNPETWEVC*CLYSFLGLKAG
Trigger: TCCTGCTTTCAGCCCAAGGAAGCTGTATAGACATCAACAGACTTCCCATGTCTCTGGGTTCTGCTGGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR GCA 72 bp AGGTTACACACAAAATCAACTGGGGCGGACTCTGGATaGACTGCCTATGAATTAGCCTTGCTCCACAAGGAG +
Preference number: 3 (lower is better)
Translates to: RLHTKSTGADSG*TAYELALLHKE
Trigger: CTCCTTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCAGAGTCCGCCCCAGTTGATTTTGTGTGTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp GTGAAGGACAGGTTAGGAAAAATAAAAGAAGTCAGGTaGAGTTGGCTGCCTGGAGTGTTCCTTGAGGCACAG +
Preference number: 3 (lower is better)
Translates to: VKDRLGKIKEVR*SWLPGVFLEAQ
Trigger: CTGTGCCTCAAGGAACACTCCAGGCAGCCAACTCCACCTGACTTCTTTTATTTTTCCTAACCTGTCCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTATCCCTCAGGTGGCTTaGGACAGAAAAGCTGAGACC +
Preference number: 3 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIIPQVA*DRKAET
Trigger: GGTCTCAGCTTTTCTGTCCAAAGCCACCTGAGGGAT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp AGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTaGAAAACAGGCTTAAATAAATTGGAATCATCCCGG +
Preference number: 3 (lower is better)
Translates to: RNEKGLRRPAAL*KTGLNKLESSR
Trigger: CCGGGATGATTCCAATTTATTTAAGCCTGTTTTCCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTAATTTACAAAAGCACTaGGGAGGATGTGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: SLQEDTTCILKGTQSQCINLQKH*GGCVGG
Trigger: TCCTCCCACACATCCTCCCAAGTGCTTTTGTAAATT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR GCA 72 bp GGTGGATCCTGTTTTCTTGACTGTATTTCAGGTTTATaGAGACCAGGTAGGTTTGTGTGTGTGAAACACCCA +
Preference number: 3 (lower is better)
Translates to: GGSCFLDCISGL*RPGRFVCVKHP
Trigger: TGGGTGTTTCACACACACAAACCTACCTGGTCTGCATAAACCTGAAATACAGTCAAGAAAACAGGATCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR TCA 72 bp TTTCAGGTTTATGCAGACCAGGTAGGTTTGTGTGTGTaGAACACCCATGAACAGTGCAGGTACAATGTGTTT +
Preference number: 3 (lower is better)
Translates to: FQVYADQVGLCV*NTHEQCRYNVF
Trigger: AAACACATTGTACCTGCACTGTTCATGGGTGTTTCACACACACAAACCTACCTGGTCTGCATAAACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CCA 72 bp CCAGTCGAGTCACTGCTGCTGAAAACCACTAAATTTTaGAGTGTCTTGTTACGCAACAATAGTAATTGTTGT +
Preference number: 3 (lower is better)
Translates to: PVESLLLKTTKF*SVLLRNNSNCC
Trigger: ACAACAATTACTATTGTTGCGTAACAAGACACTCCAAAATTTAGTGGTTTTCAGCAGCAGTGACTCGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGAGCGCGGCCCGGGCTaGGCCTGCGGAGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWERGPG*ACGAAT
Trigger: TGTAGCTGCTCCGCAGGCCCAGCCCGGGCCGCGCTC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318240.8
CDS-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCCCGCGGAAACGCAGCTaGCAATGTCCGCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSPRKRS*QCPHFR
Trigger: CCGGAAGTGCGGACATTGTCAGCTGCGTTTCCGCGG...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGCCCAGCCAGCCATATaGGTGAGCCCAGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFAQPAI*VSPEQQ
Trigger: TTGCTGTTCTGGGCTCACTCATATGGCTGGCTGGGC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTCACCGCCTAGGACTCTaGGAGCGCGGCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPHRLGL*ERGPGW
Trigger: CCAGCCCGGGCCGCGCTCGCAGAGTCCTAGGCGGTG...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318240.8
3UTR CAA 72 bp CTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATaGGCCAAACCCAGCAGAACCCAGAGACATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLPPAISCYGSL*AKPSRTQRHGK
Trigger: CTTCCCATGTCTCTGGGTTCTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCCTTGGGAGGGGCAAATaGAAGACACCTGGCACACTC +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFLGRGK*KTPGTL
Trigger: GAGTGTGCCAGGTGTCTTTCATTTGCCCCTCCCAAG...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCGAGGAACAGTTGGCCTaGGGTGACCTTGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSEEQLA*GDLAER
Trigger: TCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTC...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTTCCTTGAGGCACAGTaGCTTCTGGCTGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQFLEAQ*LLAEEQ
Trigger: CTGTTCCTCAGCCAGAAGTCACTGTGCCTCAAGGAA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTGGAGGTTGGGAGTTTaGGACCAGCCTGACCAACGT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFWRLGV*DQPDQR
Trigger: ACGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCCA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGCCATTTTCCCAAGCTTaGGCTCCTCAACCGCGACCG +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLPFSQA*APQPRP
Trigger: CGGTCGCGGTTGAGGAGCTCAAGCTTGGGAAAATGG...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGCTATGGATCGCTATTaGCCAAACCCAGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQAMDRY*PNPAEP
Trigger: GGGTTCTGCTGGGTTTGGCCAATAGCGATCCATAGC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGCAGATCACTGGAGGTTaGGAGTTTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQQITGG*EFETSL
Trigger: CAGGCTGGTCTCAAACTCCCAACCTCCAGTGATCTG...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp GACTTCTGGCTGAGGAACAGTTGGCCTGAGGTGACCTaGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCC +
Preference number: 4 (lower is better)
Translates to: DFWLRNSWPEVT*QREGQGNKHSA
Trigger: GGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCAGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp CTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTaGAGAGGAAGCAGTAGCCCAGAGCCAGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: LPGSVPASQIAL*RGSSSPEPVTE
Trigger: TTCTGTTACTGGCTCTGGGCTACTGCTTCCTCTCAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGACACTTTGGGAGGCTaGGGCAAGAGGATCACTTTG +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFDTLGG*GKRITL
Trigger: CAAAGTGATCCTCTTGCCTCAGCCTCCCAAAGTGTC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGACAGCTTCCTTGGGCTaGAAGCAGGATGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWTASLG*KQDEGS
Trigger: GCTCCCCTCATCCTGCTTTCAGCCCAAGGAAGCTGT...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTTCCTTGAGGCACAGTaGCTTCTGGCTGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSFLEAQ*LLAEEQ
Trigger: CTGTTCCTCAGCCAGAAGTCACTGTGCCTCAAGGAA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGGGACGCAATCACAGTaGATTAACCTGTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQGTQSQ*INLCSE
Trigger: CTCACTGCACAGGTTAATGCACTGTGATTGCGTCCC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGCCGAGGACTGCAGTGTaGACCAGGTCTAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLPRTAV*TRSRQQ
Trigger: TTGTTGCCTAGACCTGGTGCACACTGCAGTCCTCGG...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGCTCACTGCAACCTCTaGCTCCTGGTTTCAAACGAT +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQAHCNL*LLVSND
Trigger: ATCGTTTGAAACCAGGAGGCAGAGGTTGCAGTGAGC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCGAAGTCAGGTGGAGTTaGCTGCCTGGAGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSEVRWS*LPGVFL
Trigger: AAGGAACACTCCAGGCAGCCAACTCCACCTGACTTC...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGGGGAGAAGGTAAACTaGTCACTCCAGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFGEKVN*SLQEDT
Trigger: GGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp GGGGCGGACTCTGGATGCACTGCCTATGAATTAGCCTaGCTCCACAAGGAGCAGCACTGTTCAGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GADSGCTAYELA*LHKEQHCSGKD
Trigger: GTCTTTTCCTGAACAGTGCTGCTCCTTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCAGAGTCCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp AAGAAGTCAGGTGGAGTTGGCTGCCTGGAGTGTTCCTaGAGGCACAGTGACTTCTGGCTGAGGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: KKSGGVGCLECS*RHSDFWLRNSW
Trigger: CCAACTGTTCCTCAGCCAGAAGTCACTGTGCCTCAAGGAACACTCCAGGCAGCCAACTCCACCTGACTTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCCCCAAGGTAAATCAGTaGCTTGACCAGCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSPKVNQ*LDQPQN
Trigger: GTTCTGTGGCTGGTCAAGTCACTGATTTACCTTGGG...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTGGATGCACTGCCTATaGATTAGCCTTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQWMHCL*ISLAPQ
Trigger: TTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTTGAGGCCAGGAGTTTaGGACTCGCTTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLLRPGV*DSLGQQ
Trigger: CTGTTGCCCAAGCGAGTCTCAAACTCCTGGCCTCAA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGAGGAGGAGGTTGTGGTaGGCAGAGATTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLRRRLW*AEIAPL
Trigger: CAATGGTGCAATCTCTGCTCACCACAACCTCCTCCT...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTTCAAACGATTCTCATaGCTCAGCCTCTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQFKRFS*LSLWSS
Trigger: GCTACTCCAGAGGCTGAGGCATGAGAATCGTTTGAA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGGTGATCTTGGCTCACTaGAACTTCCGCCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLVILAH*NFRLLD
Trigger: GTCCAGGAGGCGGAAGTTGCAGTGAGCCAAGATCAC...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTCTATACAGCTTCCTTaGGCTGAAAGCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQSIQLP*AESRMR
Trigger: CCTCATCCTGCTTTCAGCCCAAGGAAGCTGTATAGA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTCCAATACAGGAGGGTaGCAACAGAAAGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLSNTGG*QQKVPR
Trigger: CCTCGGGACTTTCTGTTGCCACCCTCCTGTATTGGA...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGCAACCTCTGCCTCCTaGTTTCAAACGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQATSAS*FQTILM
Trigger: CATGAGAATCGTTTGAAACCAGGAGGCAGAGGTTGC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGGAACTTAATAGAGCCTaGGTTAGGACCCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQELNRA*VRTQTS
Trigger: TGAAGTCTGGGTCCTAACTCAGGCTCTATTAAGTTC...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGGTAGTCCCAGCTACTTaGGAGGCTAAGGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLVVPAT*EAKVRG
Trigger: TCCTCTCACCTTAGCCTCTCAAGTAGCTGGGACTAC...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGAGGAGGAGGTTGTGGTaGGCAGAGATTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWRRRLW*AEIAPL
Trigger: CAATGGTGCAATCTCTGCTCACCACAACCTCCTCCT...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGAGAACAGCAAAGAACTaGCCAGTCGAGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLRTAKN*PVESLL
Trigger: CAGCAGTGACTCGACTGGGCAGTTCTTTGCTGTTCT...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCACAATTTCAGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSTISAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCTGAAATTGT...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTTGTCCAAGCTAGAGTaGAGTGGCTTGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFLSKLE*SGLITA
Trigger: AGCTGTGATCAAGCCACTGCACTCTAGCTTGGACAA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGATCTTATCCCTCAGGTaGCTTTGGACAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQILSLR*LWTEKL
Trigger: CAGCTTTTCTGTCCAAAGCCACCTGAGGGATAAGAT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTCTATACAGCTTCCTTaGGCTGAAAGCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFSIQLP*AESRMR
Trigger: CCTCATCCTGCTTTCAGCCCAAGGAAGCTGTATAGA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGTCCAATACAGGAGGGTaGCAACAGAAAGTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWSNTGG*QQKVPR
Trigger: CCTCGGGACTTTCTGTTGCCACCCTCCTGTATTGGA...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGCCCAAGGTAAATCAGTaGCTTGACCAGCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWPKVNQ*LDQPQN
Trigger: GTTCTGTGGCTGGTCAAGTCACTGATTTACCTTGGG...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGGCTCACTGCAACCTCTaGCTCCTGGTTTCAAACGAT +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLAHCNL*LLVSND
Trigger: ATCGTTTGAAACCAGGAGGCAGAGGTTGCAGTGAGC...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAATTGGTTACCTCTGTaGAGCTGGAATAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQNWLPL*SWNKGM
Trigger: CATTCCCTTATTCCAGCTCCACAGAGGTAACCAATT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAGACCCGCAGCTCTCTaGAAAACAGGCTTAAATAAA +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQRPAAL*KTGLNK
Trigger: TTTATTTAAGCCTGTTTTCCAGAGAGCTGCGGGTCT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp CCAAACCCAGCAGAACCCAGAGACATGGGAAGTCTGTaGATGTCTATACAGCTTCCTTGGGCTGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PNPAEPRDMGSL*MSIQLPWAESR
Trigger: CCTGCTTTCAGCCCAAGGAAGCTGTATAGACATCAACAGACTTCCCATGTCTCTGGGTTCTGCTGGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGGTAAATCAGTGACTTaGCCAGCCACAGAACTTAAT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFGKSVT*PATELN
Trigger: ATTAAGTTCTGTGGCTGGTCAAGTCACTGATTTACC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTTTGGACAGAAAAGCTaGGACCTGCTGATTTACATG +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSFGQKS*DLLIYM
Trigger: CATGTAAATCAGCAGGTCTCAGCTTTTCTGTCCAAA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGTGGATGCACTGCCTATaGATTAGCCTTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWWMHCL*ISLAPQ
Trigger: TTGTGGAGCAAGGCTAATTCATAGGCAGTGCATCCA...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTACAGCTTCCTTGGGCTaGAAGCAGGATGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCITASLG*KQDEGS
Trigger: GCTCCCCTCATCCTGCTTTCAGCCCAAGGAAGCTGT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCACATGGGAAGTCTGTTaGTGTCTATACAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFTWEVC*CLYSFL
Trigger: AAGGAAGCTGTATAGACATCAACAGACTTCCCATGT...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGCTAAAAAGGCAGCCCTaGCCTTTACACAGACAGATG +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWLKRQP*PLHRQM
Trigger: CATCTGTCTGTGTAAAGGTCAGGGCTGCCTTTTTAG...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGTAGGTTTGTGTGTGTaGAACACCCATGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWVGLCV*NTHEQC
Trigger: GCACTGTTCATGGGTGTTTCACACACACAAACCTAC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTCAAAAGTTGGCAATTaGATACTAGCCACCCCTATC +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSSKVGN*ILATPI
Trigger: GATAGGGGTGGCTAGTATGCAATTGCCAACTTTTGA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTCAAAAGTTGGCAATTaGATACTAGCCACCCCTATC +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFSKVGN*ILATPI
Trigger: GATAGGGGTGGCTAGTATGCAATTGCCAACTTTTGA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAACACCCATGAACAGTaGAGGTACAATGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQNTHEQ*RYNVFN
Trigger: GTTAAACACATTGTACCTGCACTGTTCATGGGTGTT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTTTGAAACGGGGTATTaGTCTGTTGTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLFETGY*SVVLAG
Trigger: TCCAGCCAGGACAACAGAGCAATACCCCGTTTCAAA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTTACCTCTGTGGAGCTaGAATAAGGGAATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFLPLWS*NKGMRV
Trigger: AACTCTCATTCCCTTATTCCAGCTCCACAGAGGTAA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGATTTACAAAAGCACTTaGGAGGATGTGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLIYKST*EDVWEE
Trigger: CTCCTCCCACACATCCTCCCAAGTGCTTTTGTAAAT...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTAAATACCACCACCCCTaGGCCCAAAAGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPKYHHP*AQKGRV
Trigger: CACCCTGCCCTTTTGGGCCCAGGGGTGGTGGTATTT...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp ACAACGACTGGGAACCAGTGTTCTAGAGAGGGAGACTaGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: TTTGNQCSREGD*LEMRKALGDPQ
Trigger: CTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCTCTAGAACACTGGTTCCCAGTCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTGCCTTCTGACGTGGTaGAAAATTTCCCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFCLLTW*KISLLN
Trigger: ATTCAAAAGGGAAATTTTTCACCACGTCAGAAGGCA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTGCCTTCTGACGTGGTaGAAAATTTCCCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSCLLTW*KISLLN
Trigger: ATTCAAAAGGGAAATTTTTCACCACGTCAGAAGGCA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGGGTAAATCAGTGACTTaGCCAGCCACAGAACTTAAT +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLGKSVT*PATELN
Trigger: ATTAAGTTCTGTGGCTGGTCAAGTCACTGATTTACC...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTTGAGGCCAGGAGTTTaGGACTCGCTTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCILRPGV*DSLGQQ
Trigger: CTGTTGCCCAAGCGAGTCTCAAACTCCTGGCCTCAA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTCTTGGGAGGGGCAAATaGAAGACACCTGGCACACTC +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPLGRGK*KTPGTL
Trigger: GAGTGTGCCAGGTGTCTTTCATTTGCCCCTCCCAAG...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTGGAGGTTGGGAGTTTaGGACCAGCCTGACCAACGT +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPWRLGV*DQPDQR
Trigger: ACGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCCA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTCAGGTGGAGTTGGCTaGCTGGAGTGTTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCISGGVG*LECSLR
Trigger: CCTCAAGGAACACTCCAGGCAGCCAACTCCACCTGA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCCGAGGACTGCAGTGTaGACCAGGTCTAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIPRTAV*TRSRQQ
Trigger: TTGTTGCCTAGACCTGGTGCACACTGCAGTCCTCGG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCAACACCCATGAACAGTaGAGGTACAATGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFNTHEQ*RYNVFN
Trigger: GTTAAACACATTGTACCTGCACTGTTCATGGGTGTT...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTGTATTTCAGGTTTATaGAGACCAGGTAGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSCISGL*RPGRFV
Trigger: CACAAACCTACCTGGTCTGCATAAACCTGAAATACA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGTGGTGAGCAGAGATTaGACCATTGCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDVVSRD*TIALQP
Trigger: AGGCTGCAGTGCAATGGTGCAATCTCTGCTCACCAC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCCACCCTCTCCATTTCTaGCTAATTATTCCCAATAAG +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFHPLHF*LIIPNK
Trigger: CTTATTGGGAATAATTAGGCAGAAATGGAGAGGGTG...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGATCTTATCCCTCAGGTaGCTTTGGACAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLILSLR*LWTEKL
Trigger: CAGCTTTTCTGTCCAAAGCCACCTGAGGGATAAGAT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCTATGGATCGCTATTaGCCAAACCCAGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDAMDRY*PNPAEP
Trigger: GGGTTCTGCTGGGTTTGGCCAATAGCGATCCATAGC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTGGCTGAGGAACAGTTaGCCTGAGGTGACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPWLRNS*PEVTLQ
Trigger: CTGCAAGGTCACCTCAGGCCAACTGTTCCTCAGCCA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACAGGCACAGTGACTTCTaGCTGAGGAACAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDRHSDF*LRNSWP
Trigger: AGGCCAACTGTTCCTCAGCCAGAAGTCACTGTGCCT...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAAAATACCACCACCCCTaGGCCCAAAAGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPKYHHP*AQKGRV
Trigger: CACCCTGCCCTTTTGGGCCCAGGGGTGGTGGTATTT...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGGGGAGAAGGTAAACTaGTCACTCCAGGAAGACACC +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDGEKVN*SLQEDT
Trigger: GGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCACCAACTCCAGCCCATaGATAACTGATAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFTNSSP*ITDKSF
Trigger: AAAGCTTTTATCAGTTATCCATGGGCTGGAGTTGGT...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAAAGAAACATTTGTGTaGTATCAAACAGTGGCTACC +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQKETFV*YQTVAT
Trigger: GGTAGCCACTGTTTGATACCACACAAATGTTTCTTT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACCAGATCACTGGAGGTTaGGAGTTTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDQITGG*EFETSL
Trigger: CAGGCTGGTCTCAAACTCCCAACCTCCAGTGATCTG...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCCATTTTCCCAAGCTTaGGCTCCTCAACCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIPFSQA*APQPES
Trigger: GCTCTCAGGTTGAGGAGCTCAAGCTTGGGAAAATGG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318240.8
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGTCTAGACTCCTATCCTaGATTCCGGTCTCAGATAAA +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWSRLLS*IPVSDK
Trigger: TTTATCTGAGACCGGAATTCAGGATAGGAGTCTAGA...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTTTGGACAGAAAAGCTaGGACCTGCTGATTTACATG +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLFGQKS*DLLIYM
Trigger: CATGTAAATCAGCAGGTCTCAGCTTTTCTGTCCAAA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACCTTGAGAGGCTAAGGTaGGAGGATCACTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDLERLR*EDHFRT
Trigger: AGTCCTGAAGTGATCCTCTCACCTTAGCCTCTCAAG...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTGTAGTCCCAGCTACTTaGGAGGCTAAGGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIVVPAT*EAKVRG
Trigger: TCCTCTCACCTTAGCCTCTCAAGTAGCTGGGACTAC...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTGACACTTTGGGAGGCTaGGGCAAGAGGATCACTTTG +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPDTLGG*GKRITL
Trigger: CAAAGTGATCCTCTTGCCTCAGCCTCCCAAAGTGTC...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAGAGGAACAGTTGGCCTaGGGTGACCTTGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPEEQLA*GDLAER
Trigger: TCTCTCTGCAAGGTCACCTCAGGCCAACTGTTCCTC...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGCCACCACTACACAGATaGCATCACAACATCCAAATT +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLPPLHR*HHNIQI
Trigger: AATTTGGATGTTGTGATGGCATCTGTGTAGTGGTGG...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGGGACGCAATCACAGTaGATTAACCTGTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDGTQSQ*INLCSE
Trigger: CTCACTGCACAGGTTAATGCACTGTGATTGCGTCCC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTGTGGTGAGCAGAGATTaGACCATTGCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPVVSRD*TIALQP
Trigger: AGGCTGCAGTGCAATGGTGCAATCTCTGCTCACCAC...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGCTGCTCCACTGTGTTaGACAGTAATTATTAAATCT +
Preference number: 4 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFAAPLC*TVIIKS
Trigger: AGATTTAATAATTACTGTCCAACACAGTGGAGCAGC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTAGTTTGAGACTCGCTTaGGCAACAGAGCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCISLRLA*ATEQDP
Trigger: GGGGTCTTGCTCTGTTGCCCAAGCGAGTCTCAAACT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTCTTTTTCACTCTTCTaGTGTCAAACTGTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQSFSLF*CQTVFY
Trigger: GTAAAAGACAGTTTGACACCAGAAGAGTGAAAAAGA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACCAAGCTAGAGTGCAGTaGCTTGATCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDQARVQ*LDHSSL
Trigger: CAGTGAGCTGTGATCAAGCCACTGCACTCTAGCTTG...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTATAGGTCCCTACACTaGATTTTCAAAGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLYRSLH*IFKAQD
Trigger: ATCTTGGGCTTTGAAAATTCAGTGTAGGGACCTATA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGAAAATGTTGCTAGTATaGAAACAACGACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: VSNSILPGSVPASQIALLKMLLV*KQRLGT
Trigger: GGTTCCCAGTCGTTGTTTTCATACTAGCAACATTTT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGAAAATGTTGCTAGTATaGAAACAACGACTGGGAACC +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWKMLLV*KQRLGT
Trigger: GGTTCCCAGTCGTTGTTTTCATACTAGCAACATTTT...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTACGCTTATTCAAACTaGTGGCTATTTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLYAYSN*WLFLST
Trigger: AGTGGACAAAAATAGCCATCAGTTTGAATAAGCGTA...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGTAGGTTTGTGTGTGTaGAACACCCATGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDVGLCV*NTHEQC
Trigger: GCACTGTTCATGGGTGTTTCACACACACAAACCTAC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTGGAGTACAGTGGTGTaGTCTTGGCTCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPWSTVV*SWLTAT
Trigger: AGTTGCAGTGAGCCAAGATCACACCACTGTACTCCA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTAGAACAGCAAAGAACTaGCCAGTCGAGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIRTAKN*PVESLL
Trigger: CAGCAGTGACTCGACTGGGCAGTTCTTTGCTGTTCT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACTTCAAACGATTCTCATaGCTCAGCCTCTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDFKRFS*LSLWSS
Trigger: GCTACTCCAGAGGCTGAGGCATGAGAATCGTTTGAA...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGCACCCTCTCCATTTCTaGCTAATTATTCCCAATAAG +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWHPLHF*LIIPNK
Trigger: CTTATTGGGAATAATTAGGCAGAAATGGAGAGGGTG...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAAGTTTGAGACTCGCTTaGGCAACAGAGCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPSLRLA*ATEQDP
Trigger: GGGGTCTTGCTCTGTTGCCCAAGCGAGTCTCAAACT...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGGCATCTCAACCATTATaGGAAACAATGTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLASQPL*ETMSEV
Trigger: AACTTCAGACATTGTTTCCCATAATGGTTGAGATGC...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAAGGCACAGTGACTTCTaGCTGAGGAACAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPRHSDF*LRNSWP
Trigger: AGGCCAACTGTTCCTCAGCCAGAAGTCACTGTGCCT...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGCATCTCATCATCTTTaGATATTTATAGGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWASHHL*IFIGPY
Trigger: GTAGGGACCTATAAATATTCAAAGATGATGAGATGC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCTAAAAAGGCAGCCCTaGCCTTTACACAGACAGATG +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCILKRQP*PLHRQM
Trigger: CATCTGTCTGTGTAAAGGTCAGGGCTGCCTTTTTAG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCATGGAGTACAGTGGTGTaGTCTTGGCTCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPWSTVV*SWLTAT
Trigger: AGTTGCAGTGAGCCAAGATCACACCACTGTACTCCA...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTACAATTTCAGCTCACTaGAACCTCTGCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCITISAH*NLCLLV
Trigger: AACCAGGAGGCAGAGGTTGCAGTGAGCTGAAATTGT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR GCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTTGTCCAAGCTAGAGTaGAGTGGCTTGATCACAGCT +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPLSKLE*SGLITA
Trigger: AGCTGTGATCAAGCCACTGCACTCTAGCTTGGACAA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGGCTGCTCCACTGTGTTaGACAGTAATTATTAAATCT +
Preference number: 4 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWAAPLC*TVIIKS
Trigger: AGATTTAATAATTACTGTCCAACACAGTGGAGCAGC...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTCTTTTTCACTCTTCTaGTGTCAAACTGTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLSFSLF*CQTVFY
Trigger: GTAAAAGACAGTTTGACACCAGAAGAGTGAAAAAGA...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTGCAACCTCTGCCTCCTaGTTTCAAACGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPATSAS*FQTILM
Trigger: CATGAGAATCGTTTGAAACCAGGAGGCAGAGGTTGC...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACTCGAGTCACTGCTGCTaGAAACCACTAAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDSSHCC*KPLNFG
Trigger: TCCAAAATTTAGTGGTTTTCAGCAGCAGTGACTCGA...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTCTAGACTCCTATCCTaGATTCCGGTCTCAGATAAA +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPSRLLS*IPVSDK
Trigger: TTTATCTGAGACCGGAATTCAGGATAGGAGTCTAGA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTTCGAGTCACTGCTGCTaGAAACCACTAAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPSSHCC*KPLNFG
Trigger: TCCAAAATTTAGTGGTTTTCAGCAGCAGTGACTCGA...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTGATGGCTCCTTAGCATaGAAGTATGACCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPDGSLA*KYDLEI
Trigger: GATTTCAAGGTCATACTTTCATGCTAAGGAGCCATC...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTTACCTCTGTGGAGCTaGAATAAGGGAATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCILPLWS*NKGMRV
Trigger: AACTCTCATTCCCTTATTCCAGCTCCACAGAGGTAA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACACCAACTCCAGCCCATaGATAACTGATAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDTNSSP*ITDKSF
Trigger: AAAGCTTTTATCAGTTATCCATGGGCTGGAGTTGGT...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCTATGTTGCCCAGGCTaGGATCCTGTTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLQEDTTCILKGTQSQCILCCPG*DPVFLF
Trigger: AAAAAGAAAAACAGGATCCCAGCCTGGGCAACATAG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCATCTCATCATCTTTaGATATTTATAGGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDASHHL*IFIGPY
Trigger: GTAGGGACCTATAAATATTCAAAGATGATGAGATGC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAGATGGCTCCTTAGCATaGAAGTATGACCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPDGSLA*KYDLEI
Trigger: GATTTCAAGGTCATACTTTCATGCTAAGGAGCCATC...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAAGACCCGCAGCTCTCTaGAAAACAGGCTTAAATAAA +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPRPAAL*KTGLNK
Trigger: TTTATTTAAGCCTGTTTTCCAGAGAGCTGCGGGTCT...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCACTATGTTGCCCAGGCTaGGATCCTGTTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPLCCPG*DPVFLF
Trigger: AAAAAGAAAAACAGGATCCCAGCCTGGGCAACATAG...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACAAAACCACTAAATTTTaGAGTGTCTTGTTACGCAAC +
Preference number: 4 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDKTTKF*SVLLRN
Trigger: GTTGCGTAACAAGACACTCCAAAATTTAGTGGTTTT...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR TCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCATACGCTTATTCAAACTaGTGGCTATTTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPYAYSN*WLFLST
Trigger: AGTGGACAAAAATAGCCATCAGTTTGAATAAGCGTA...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CCA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAGCATCTCAACCATTATaGGAAACAATGTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPASQPL*ETMSEV
Trigger: AACTTCAGACATTGTTTCCCATAATGGTTGAGATGC...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
3UTR CAA 72 bp TCACTGCTGCTGAAAACCACTAAATTTTGGAGTGTCTaGTTACGCAACAATAGTAATTGTTGTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: SLLLKTTKFWSV*LRNNSNCCPTT
Trigger: AGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACTCCAAAATTTAGTGGTTTTCAGCAGCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTGGCCTGAGGTGACCTaGCAGAGAGAGGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSWPEVT*QREGQG
Trigger: CCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCCGAGGTCTCCCTATGTaGCCCAGGCTGGGATCCTGT +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSRGLPM*PRLGSC
Trigger: ACAGGATCCCAGCCTGGGCAACATAGGGAGACCTCG...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTGGCCTGAGGTGACCTaGCAGAGAGAGGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: VSNSILPGSVPASQIALLWPEVT*QREGQG
Trigger: CCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp AGGAGAGGTGTATGGGGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGCGAGGTCTCCCTATGTaGCCCAGGCTGGGATCCTGT +
Preference number: 5 (lower is better)
Translates to: RRGVWGEGKLVTPGRHHLRGLPM*PRLGSC
Trigger: ACAGGATCCCAGCCTGGGCAACATAGGGAGACCTCG...CAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCCCCATACACCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTGCCTGGAGTGTTCCTaGAGGCACAGTGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFCLECS*RHSDFW
Trigger: CCAGAAGTCACTGTGCCTCAAGGAACACTCCAGGCA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAAGTCAGGTGGAGTaGGCTGCCTGGAGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSRSQVE*AAWSVP
Trigger: AGGAACACTCCAGGCAGCCAACTCCACCTGACTTCT...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGAGCCAGATAGCACTCTaGAGAGGAAGCAGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQSQIAL*RGSSSP
Trigger: TGGGCTACTGCTTCCTCTCAAGAGTGCTATCTGGCT...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAGTACAGTGGTGTGATCTaGGCTCACTGCAACTTCCGC +
Preference number: 5 (lower is better)
Translates to: SPPSSHLLLWIAIGQTQQYSGVI*AHCNFR
Trigger: GCGGAAGTTGCAGTGAGCCAAGATCACACCACTGTA...CTGCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCATCCCTCAGGTGGCTTaGGACAGAAAAGCTGAGACC +
Preference number: 5 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFIPQVA*DRKAET
Trigger: GGTCTCAGCTTTTCTGTCCAAAGCCACCTGAGGGAT...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAAAGTGGAGGATCGCTaGAGCCCAGGAGATCGAGAT +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSKVEDR*SPGDRD
Trigger: ATCTCGATCTCCTGGGCTCAAGCGATCCTCCACTTT...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCAGCCAGATAGCACTCTaGAGAGGAAGCAGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFSQIAL*RGSSSP
Trigger: TGGGCTACTGCTTCCTCTCAAGAGTGCTATCTGGCT...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGTACAGTGGTGTGATCTaGGCTCACTGCAACTTCCGC +
Preference number: 5 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWYSGVI*AHCNFR
Trigger: GCGGAAGTTGCAGTGAGCCAAGATCACACCACTGTA...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCAATTTACAAAAGCACTaGGGAGGATGTGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSNLQKH*GGCVGG
Trigger: TCCTCCCACACATCCTCCCAAGTGCTTTTGTAAATT...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCGACATGGGAAGTCTGTaGATGTCTATACAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFDMGSL*MSIQLP
Trigger: AGGAAGCTGTATAGACATCAACAGACTTCCCATGTC...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACCTGAGGCAGAATCGCTaGAACCTGGGAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDLRQNR*NLGGGG
Trigger: ACCTCCTCCTCCCAGGTTCAAGCGATTCTGCCTCAG...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCTGAGGCAGAATCGCTaGAACCTGGGAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SLQEDTTCILKGTQSQCILRQNR*NLGGGG
Trigger: ACCTCCTCCTCCCAGGTTCAAGCGATTCTGCCTCAG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp AGAGGGAGACTTGTTAGAAATGAGAAAGGCCTTAGGAGACCCGCAGCTCTCTGGACAGGCTTAAATAAATaGGAATCATCCCGGGGACAC +
Preference number: 5 (lower is better)
Translates to: RGRLVRNEKGLRRPAALWTGLNK*ESSRGH
Trigger: GTGTCCCCGGGATGATTCCAATTTATTTAAGCCTGT...CCAGAGAGCTGCGGGTCTCCTAAGGCCTTTCTCATTTCTAACAAGTCTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGACAGGCTTAAATAAATaGGAATCATCCCGGGGACAC +
Preference number: 5 (lower is better)
Translates to: VSNSILPGSVPASQIALLTGLNK*ESSRGH
Trigger: GTGTCCCCGGGATGATTCCAATTTATTTAAGCCTGT...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTCTAGAGAGGGAGACTaGTTAGAAATGAGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: VSNSILPGSVPASQIALLSREGD*LEMRKA
Trigger: GGCCTTTCTCATTTCTAACAAGTCTCCCTCTCTAGA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCGGGGTATTGCTCTGTaGTCCTGGCTGGAGTACAGT +
Preference number: 5 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIRGIAL*SWLEYS
Trigger: ACTGTACTCCAGCCAGGACAACAGAGCAATACCCCG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTACCATTTTCCCAAGCTaGAGCTCCTCAACCGCGACC +
Preference number: 5 (lower is better)
Translates to: SLQEDTTCILKGTQSQCITIFPS*SSSTAT
Trigger: GGTCGCGGTTGAGGAGCTCAAGCTTGGGAAAATGGT...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTGTATCATTGGATTCTaGTATTGCTTTCTTAGGCCA +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSCIIGF*YCFLRP
Trigger: TGGCCTAAGAAAGCAATACAAGAATCCAATGATACA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTGCCTATGAATTAGCCTaGCTCCACAAGGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SLQEDTTCILKGTQSQCIAYELA*LHKEQH
Trigger: GTGCTGCTCCTTGTGGAGCAAGGCTAATTCATAGGC...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCTGAAGTTGATGGCTCAAAATATAACAGTATAGCCAGGCAGTGGCTCATGCCTAAAGTGGAGGATCGCTaGAGCCCAGGAGATCGAGAT +
Preference number: 5 (lower is better)
Translates to: SEVDGSKYNSIARQWLMPKVEDR*SPGDRD
Trigger: ATCTCGATCTCCTGGGCTCAAGCGATCCTCCACTTT...AGGCATGAGCCACTGCCTGGCTATACTGTTATATTTTGAGCCATCAACTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCATGCCTGGAGTGTTCCTaGAGGCACAGTGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPCLECS*RHSDFW
Trigger: CCAGAAGTCACTGTGCCTCAAGGAACACTCCAGGCA...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TGGCCTGAGGTGACCTTGCAGAGAGAGGGCCAAGGGAATAAACACTCTGCCTTCTTGATATACTCCTGCTaGGAAAAATCAAAAGTTGGC +
Preference number: 5 (lower is better)
Translates to: WPEVTLQREGQGNKHSAFLIYSC*EKSKVG
Trigger: GCCAACTTTTGATTTTTCCAAGCAGGAGTATATCAA...GAAGGCAGAGTGTTTATTCCCTTGGCCCTCTCTCTGCAAGGTCACCTCAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp ATTCTCCTCCCTCCAGCCATCTCCTGCTATGGATCGCTATTGGCCAAACCCAGCTTGATATACTCCTGCTaGGAAAAATCAAAAGTTGGC +
Preference number: 5 (lower is better)
Translates to: ILLPPAISCYGSLLAKPSLIYSC*EKSKVG
Trigger: GCCAACTTTTGATTTTTCCAAGCAGGAGTATATCAA...GCTGGGTTTGGCCAATAGCGATCCATAGCAGGAGATGGCTGGAGGGAGGAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTCTAGAGTGCAGTGGCTaGATCACAGCTCACTGTAGC +
Preference number: 5 (lower is better)
Translates to: SLQEDTTCILKGTQSQCILECSG*ITAHCS
Trigger: GCTACAGTGAGCTGTGATCAAGCCACTGCACTCTAG...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCACGGGGTATTGCTCTGTaGTCCTGGCTGGAGTACAGT +
Preference number: 5 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPRGIAL*SWLEYS
Trigger: ACTGTACTCCAGCCAGGACAACAGAGCAATACCCCG...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp GTGAGCAATAGTATTCTCCCAGGCAGTGTCCCAGCAAGCCAGATAGCACTCTTGTGTATCATTGGATTCTaGTATTGCTTTCTTAGGCCA +
Preference number: 5 (lower is better)
Translates to: VSNSILPGSVPASQIALLCIIGF*YCFLRP
Trigger: TGGCCTAAGAAAGCAATACAAGAATCCAATGATACA...CAAGAGTGCTATCTGGCTTGCTGGGACACTGCCTGGGAGAATACTATTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp GGAGAAGGTAAACTGGTCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGACATGGGAAGTCTGTaGATGTCTATACAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GEGKLVTPGRHHLYIKRDDMGSL*MSIQLP
Trigger: AGGAAGCTGTATAGACATCAACAGACTTCCCATGTC...GTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGACCAGTTTACCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp TCACTCCAGGAAGACACCACCTGTATATTAAAAGGGACGCAATCACAGTGCATTTCTAGAGAGGGAGACTaGTTAGAAATGAGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLQEDTTCILKGTQSQCISREGD*LEMRKA
Trigger: GGCCTTTCTCATTTCTAACAAGTCTCCCTCTCTAGA...AATGCACTGTGATTGCGTCCCTTTTAATATACAGGTGGTGTCTTCCTGGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS-3UTR CAA 90 bp AGTGTCTTGTTACGCAACAATAGTAATTGTTGTCCCACCACTACACAGATGCCAAATTTACAAAAGCACTaGGGAGGATGTGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SVLLRNNSNCCPTTTQMPNLQKH*GGCVGG
Trigger: TCCTCCCACACATCCTCCCAAGTGCTTTTGTAAATT...TGGCATCTGTGTAGTGGTGGGACAACAATTACTATTGTTGCGTAACAAGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318240.8
ENST00000613385.4
CDS CCA 72 bp GCGCACCGCCTAGGACTCTGCGAGCGCGGCCCGGGCTaGGCCTGCGGAGCAGCTACAAAGCCCAACCCAGGC +
Preference number: 6 (lower is better)
Translates to: AHRLGLCERGPG*ACGAATKPNPG
Trigger: GCCTGGGTTGGGCTTTGTAGCTGCTCCGCAGGCCCAGCCCGGGCCGCGCTCGCAGAGTCCTAGGCGGTGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318240.8
CDS CCA 72 bp ACACATATGGAAACTGGGTCAGAAAAGTCTAGAAGGTaGCTACGAGATATTATTATTTTAATTATTCGCTCC +
Preference number: 6 (lower is better)
Translates to: THMETGSEKSRR*LRDIIILIIRS
Trigger: GGAGCGAATAATTAAAATAATAATATCTCGTAGCCACCTTCTAGACTTTTCTGACCCAGTTTCCATATGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582392.2