RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C18ORF25 (Homo sapiens)

Ensembl gene IDs: ENSG00000152242

Ensembl transcript IDs: ENST00000587591.5, ENST00000588730.1, ENST00000615052.5, ENST00000615553.1, ENST00000619230.1, ENST00000619301.4

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGCCAATAAGGACCTGACTGATATGTGTGCGAATGCCCTAAGATaGGAGTGCCAATGGGGTGGGCAGATAGTGGTCAAGTCTAGATAT +
Preference number: 1 (lower is better)
Translates to: GANKDLTDMCANALR*ECQWGGQIVVKSRY
Trigger: ATATCTAGACTTGACCACTATCTGCCCACCCCATTGGCACTCCCATCTTAGGGCATTCGCACACATATCAGTCAGGTCCTTATTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp GCAAAAGTGCAAGCTGACATAAAGGCAAAGGGCCAGAGAAGAGACTaGTTACAGCTCCACTCTGTTCCTAATCCACAGTGCACACAGCAC +
Preference number: 1 (lower is better)
Translates to: AKVQADIKAKGQRRD*LQLHSVPNPQCTQH
Trigger: GTGCTGTGTGCACTGTGGATTAGGAACAGAGTGGAGCTGTAACCAGTCTCTTCTCTGGCCCTTTGCCTTTATGTCAGCTTGCACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp CAGAGAAGAGACTGGTTACAGCTCCACTCTGTTCCTAATCCACAGTaGACACAGCACGCCAACTCTGTAGAGGATGACTATATTAGGGAC +
Preference number: 1 (lower is better)
Translates to: QRRDWLQLHSVPNPQ*TQHANSVEDDYIRD
Trigger: GTCCCTAATATAGTCATCCTCTACAGAGTTGGCGTGCTGTGTGCACTGTGGATTAGGAACAGAGTGGAGCTGTAACCAGTCTCTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp AGGTCCAAGGATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTaGTCTGGCCTCTGGGTCTTTGGTTTTTGTCTAGAATTGTGGCCA +
Preference number: 1 (lower is better)
Translates to: RSKDTPVVNLQKVLL*SGLWVFGFCLELWP
Trigger: TGGCCACAATTCTAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATCCTTGGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp GCATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTaGCAAGTGCATTGGTTCCTAGCCATACAATGGCTAACATTTCAT +
Preference number: 1 (lower is better)
Translates to: ASSPRSHSSNSRSIN*QVHWFLAIQWLTFH
Trigger: ATGAAATGTTAGCCATTGTATGGCTAGGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp CGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTaGTTCCTAGCCATACAATGGCTAACATTTCATTTTCACGGTAAG +
Preference number: 1 (lower is better)
Translates to: RSHSSNSRSINCQVH*FLAIQWLTFHFHGK
Trigger: CTTACCGTGAAAATGAAATGTTAGCCATTGTATGGCTAGGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp GGTAATTCTCATACTCTTAATGATAAGAAGAGCCACCAGGGGATTTaGAGAGACAGGCAAAGGGCCATAGCAACGGTAACAATGGAAACA +
Preference number: 1 (lower is better)
Translates to: GNSHTLNDKKSHQGI*RDRQRAIATVTMET
Trigger: TGTTTCCATTGTTACCGTTGCTATGGCCCTTTGCCTGTCTCTCCAAATCCCCTGGTGGCTCTTCTTATCATTAAGAGTATGAGAATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp CTACTTTGCTCTGGCCTCTGGGTCTTTGGTTTTTGTCTAGAATTGTaGCCATGTGAGAGACTGATATATGAGTTGCTAAAGCTGGAGGTT +
Preference number: 1 (lower is better)
Translates to: LLCSGLWVFGFCLEL*PCERLIYELLKLEV
Trigger: AACCTCCAGCTTTAGCAACTCATATATCAGTCTCTCACATGGCCACAATTCTAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp AGCAGATCCATTAACTGCCAAGTGCATTGGTTCCTAGCCATACAATaGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: SRSINCQVHWFLAIQ*LTFHFHGKRSKRLQ
Trigger: TTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTGTATGGCTAGGAACCAATGCACTTGGCAGTTAATGGATCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp AAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAACAGTTGTTaGTACATACTCTTTATACAGAGACCAGCTATGAAAGACGGCACT +
Preference number: 1 (lower is better)
Translates to: KYSIRSTSSRMLNSC*YILFIQRPAMKDGT
Trigger: AGTGCCGTCTTTCATAGCTGGTCTCTGTATAAAGAGTATGTAGCAACAACTGTTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR TCA 90 bp TTAATACCTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTaGAATGCCTCTGTCTCAAAGGAGACATTTTGCAAAGAGTTATTA +
Preference number: 1 (lower is better)
Translates to: LIPSDAQNTSWWVSI*NASVSKETFCKELL
Trigger: TAATAACTCTTTGCAAAATGTCTCCTTTGAGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAGGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp ACCTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATaGCTCTGTCTCAAAGGAGACATTTTGCAAAGAGTTATTAATTAT +
Preference number: 1 (lower is better)
Translates to: TFRCPEHLMVGIYLK*LCLKGDILQRVINY
Trigger: ATAATTAATAACTCTTTGCAAAATGTCTCCTTTGAGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp CATATTATAAGAAAGAAGGTAGTAACTAATGCCACAAAATTCCAATaGTGGCATTTCCTGAATTCCCTGAAGCTCCTGCTACCCTTTGCT +
Preference number: 1 (lower is better)
Translates to: HIIRKKVVTNATKFQ*WHFLNSLKLLLPFA
Trigger: AGCAAAGGGTAGCAGGAGCTTCAGGGAATTCAGGAAATGCCAGCATTGGAATTTTGTGGCATTAGTTACTACCTTCTTTCTTATAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 90 bp AGGCCAGATCAAATGAGATGCTATCAGAGAAGATCAAAGAACATATaGACAAATACATTCCTGTGGAAGAAGGAACATACAGGAGAACTA +
Preference number: 1 (lower is better)
Translates to: RPDQMRCYQRRSKNI*TNTFLWKKEHTGEL
Trigger: TAGTTCTCCTGTATGTTCCTTCTTCCACAGGAATGTATTTGTGCATATGTTCTTTGATCTTCTCTGATAGCATCTCATTTGATCTGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp AGTAGTATTTATAAACACAAAGGGACATGTCAATTATCTGTGCTGTaGGAAGTCAACAGGAGCAAACTCAAGAAAGAAGGCAGAAGACTT +
Preference number: 1 (lower is better)
Translates to: SSIYKHKGTCQLSVL*EVNRSKLKKEGRRL
Trigger: AAGTCTTCTGCCTTCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTCCCTTTGTGTTTATAAATACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 90 bp ATTATAAGAAAGAAGGTAGTAACTAATGCCACAAAATTCCAATGCTaGCATTTCCTGAATTCCCTGAAGCTCCTGCTACCCTTTGCTAAT +
Preference number: 1 (lower is better)
Translates to: IIRKKVVTNATKFQC*HFLNSLKLLLPFAN
Trigger: ATTAGCAAAGGGTAGCAGGAGCTTCAGGGAATTCAGGAAATGCCAGCATTGGAATTTTGTGGCATTAGTTACTACCTTCTTTCTTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCGTGCCAATAAGGACCTaGCTGATATGTGTGCGAATG +
Preference number: 2 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSVPIRT*LICVRM
Trigger: CATTCGCACACATATCAGTCAGGTCCTTATTGGCAC...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCACCCACCCCTCACAGTaGCTTATGCAGAGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: HQVHAHTPATADPLTAKCTHPSQ*LMQSRH
Trigger: GTGCCTGCTCTGCATAAGGCACTGTGAGGGGTGGGT...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCGCCCTAAGATGGGAGTaGCAATGGGGTGGGCAGATA +
Preference number: 2 (lower is better)
Translates to: HAHTPATADPLTAKCIGSALRWE*QWGGQI
Trigger: TATCTGCCCACCCCATTGGCACTCCCATCTTAGGGC...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCCTTAATACCTTCAGATaGCCAGAACACCTCATGGTG +
Preference number: 2 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSLNTFR*PEHLMV
Trigger: CACCATGAGGTGTTCTGGGCATCTGAAGGTATTAAG...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCGGAGTGCCAATGGGGTaGGCAGATAGTGGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: HAHTPATADPLTAKCIGSGVPMG*ADSGQV
Trigger: GACTTGACCACTATCTGCCCACCCCATTGGCACTCC...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCGGAGTGCCAATGGGGTaGGCAGATAGTGGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVGVPMG*ADSGQV
Trigger: GACTTGACCACTATCTGCCCACCCCATTGGCACTCC...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCAGATGGGAGTGCCAATaGGGTGGGCAGATAGTGGTC +
Preference number: 2 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVRWECQ*GGQIVV
Trigger: GACCACTATCTGCCCACCCCATTGGCACTCCCATCT...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCTACAGAGACCAGCTATaGAAGACGGCACTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVYRDQL*KTALSS
Trigger: AGAGGAAAGTGCCGTCTTTCATAGCTGGTCTCTGTA...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCAACGTGCTTTGCATCTaGTTTCTTATGGTACATTCT +
Preference number: 2 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPNVLCI*FLMVHS
Trigger: AGAATGTACCATAAGAAATCAGATGCAAAGCACGTT...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCGGCAAAAGTGCAAGCTaGCATAAAGGCAAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: GSHIIHILENRDWGACFAGKSAS*HKGKGP
Trigger: TGGCCCTTTGCCTTTATGTCAGCTTGCACTTTTGCC...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCGCAGAGAGATTACTCTaGAGACAATGTCCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: HQVHAHTPATADPLTAKCAERLL*RQCPVK
Trigger: CTTCACAGGACATTGTCTTCAGAGTAATCTCTCTGC...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCGCAGAGAGATTACTCTaGAGACAATGTCCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: HAHTPATADPLTAKCIGSAERLL*RQCPVK
Trigger: CTTCACAGGACATTGTCTTCAGAGTAATCTCTCTGC...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTGCCCTAAGATGGGAGTaGCAATGGGGTGGGCAGATA +
Preference number: 2 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGALRWE*QWGGQI
Trigger: TATCTGCCCACCCCATTGGCACTCCCATCTTAGGGC...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCCTTCCCCTCCCCCTCTaGATCTTAATATCCAAATCT +
Preference number: 2 (lower is better)
Translates to: HAHTPATADPLTAKCIGSLPLPL*ILISKS
Trigger: AGATTTGGATATTAAGATGCAGAGGGGGAGGGGAAG...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGCGAATGCCCTAAGATaGGAGTGCCAATGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKANALR*ECQWGG
Trigger: CCCACCCCATTGGCACTCCCATCTTAGGGCATTCGC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCCTTTGCTCTGGCCTCTaGGTCTTTGGTTTTTGTCTA +
Preference number: 2 (lower is better)
Translates to: HAHTPATADPLTAKCIGSLCSGL*VFGFCL
Trigger: TAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAG...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTGTGCCAATAAGGACCTaGCTGATATGTGTGCGAATG +
Preference number: 2 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSVPIRT*LICVRM
Trigger: CATTCGCACACATATCAGTCAGGTCCTTATTGGCAC...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCAGAGGCCAGATCAAATaGGATGCTATCAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: HAHTPATADPLTAKCIGSRGQIK*DAIRED
Trigger: ATCTTCTCTGATAGCATCTCATTTGATCTGGCCTCT...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCACATCATACACATATTaGAGAACAGGGATTGGGGAG +
Preference number: 2 (lower is better)
Translates to: HQVHAHTPATADPLTAKCTSYTY*RTGIGE
Trigger: CTCCCCAATCCCTGTTCTCCAATATGTGTATGATGT...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CAA 90 bp AAGGTCCAAGGATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTaGCTCTGGCCTCTGGGTCTTTGGTTTTTGTCTAGAATTGTGGCC +
Preference number: 2 (lower is better)
Translates to: KVQGYTSSESSEGPT*LWPLGLWFLSRIVA
Trigger: GGCCACAATTCTAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATCCTTGGACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCGTATCATTAATACCTTaGCTGAAACCACACTCTCCA +
Preference number: 2 (lower is better)
Translates to: HQVHAHTPATADPLTAKCVSLIP*LKPHSP
Trigger: TGGAGAGTGTGGTTTCAGGCAAGGTATTAATGATAC...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCCAACAGCTAGGTCACTaGTCTGTTTTTCACAAATTG +
Preference number: 2 (lower is better)
Translates to: HQVHAHTPATADPLTAKCQQLGH*SVFHKL
Trigger: CAATTTGTGAAAAACAGAGCAGTGACCTAGCTGTTG...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAAGATGGGAGTGCCAATaGGGTGGGCAGATAGTGGTC +
Preference number: 2 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKRWECQ*GGQIVV
Trigger: GACCACTATCTGCCCACCCCATTGGCACTCCCATCT...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGCTGTGGCAGCACTCTaGGGGGCCAAGACGGATGGA +
Preference number: 2 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNAVAAL*GAKTDG
Trigger: TCCATCCGTCTTGGCCCCCCAGAGTGCTGCCACAGC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615553.1
3UTR CAA 90 bp GTCCTACTTTGCTCTGGCCTCTGGGTCTTTGGTTTTTGTCTAGAATaGTGGCCATGTGAGAGACTGATATATGAGTTGCTAAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VLLCSGLWVFGFCLE*WPCERLIYELLKLE
Trigger: CTCCAGCTTTAGCAACTCATATATCAGTCTCTCACATGGCCACAATTCTAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAGTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGACGGATGGACCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNDGWTT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGGTCCATCCGTC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
3UTR-3UTR GCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCGGTATCTATCTGAAATaGCTCTGTCTCAAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: GSHIIHILENRDWGACFAGIYLK*LCLKGD
Trigger: GTCTCCTTTGAGACAGAGGCATTTCAGATAGATACC...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAACAGAAGGTCCTACTTTaGTCTGGCCTCTGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKQKVLL*SGLWVF
Trigger: AAAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTG...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTGGCCAGAGAAGAGACTaGTTACAGCTCCACTCTGTT +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPGQRRD*LQLHSV
Trigger: AACAGAGTGGAGCTGTAACCAGTCTCTTCTCTGGCC...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCACAAATTGGAGGGGGTaGAAACTTAACCAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: GSHIIHILENRDWGACFATNWRG*KLNQVS
Trigger: ACTGACTTGGTTAAGTTTCCACCCCCTCCAATTTGT...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTACAAGATTCAAAAACTaGAACCCATTTTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSTRFKN*NPFCLA
Trigger: TGCCAGGCAAAATGGGTTTCAGTTTTTGAATCTTGT...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCTGGGAGGTGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNLGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCACCTCCCAG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
3UTR-3UTR TCA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGACAAGATTCAAAAACTaGAACCCATTTTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: TLPETTLSTLLETAMKRETRFKN*NPFCLA
Trigger: TGCCAGGCAAAATGGGTTTCAGTTTTTGAATCTTGT...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTCATGTCAATTATCTGTaGTGTGGGAAGTCAACAGGA +
Preference number: 2 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGHVNYL*CGKSTG
Trigger: TCCTGTTGACTTCCCACAGCACAGATAATTGACATG...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCCCAATGACATTAACGTaGTTTGCATCTGATTTCTTA +
Preference number: 2 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVPMTLT*FASDFL
Trigger: TAAGAAATCAGATGCAAAGCACGTTAATGTCATTGG...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTACTTCACTCCCCCTGTaGAGAGTACATAGTGTTCTA +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPTSLPL*RVHSVL
Trigger: TAGAACACTATGTACTCTGCACAGGGGGAGTGAAGT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAACACGGGAAATCACCTaGTGTGTGGAATTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKTREIT*CVELGK
Trigger: TTTTCCCAATTCCACACAGCAGGTGATTTCCCGTGT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAACTTTGCTCTGGCCTCTaGGTCTTTGGTTTTTGTCTA +
Preference number: 2 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKLCSGL*VFGFCL
Trigger: TAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAG...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTAGAGGCCAGATCAAATaGGATGCTATCAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPRGQIK*DAIRED
Trigger: ATCTTCTCTGATAGCATCTCATTTGATCTGGCCTCT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAGGACAAGTTTTTAAATaGACATGCCCTACTAGGTGC +
Preference number: 2 (lower is better)
Translates to: DMSIICAVGSQQEQTQERGQVFK*TCPTRC
Trigger: GCACCTAGTAGGGCATGTGCATTTAAAAACTTGTCC...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTGGTATCTATCTGAAATaGCTCTGTCTCAAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPGIYLK*LCLKGD
Trigger: GTCTCCTTTGAGACAGAGGCATTTCAGATAGATACC...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAACACGGGAAATCACCTaGTGTGTGGAATTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTTREIT*CVELGK
Trigger: TTTTCCCAATTCCACACAGCAGGTGATTTCCCGTGT...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAACAATTATCTGTGCTGTaGGAAGTCAACAGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKQLSVL*EVNRSK
Trigger: TTTGCTCCTGTTGACTTCCCACAGCACAGATAATTG...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTACAAATTGGAGGGGGTaGAAACTTAACCAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPTNWRG*KLNQVS
Trigger: ACTGACTTGGTTAAGTTTCCACCCCCTCCAATTTGT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CAA 90 bp AAATGTCACAGGAGCTGTATACCACGGAATTGTATCATTAATACCTaGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAA +
Preference number: 2 (lower is better)
Translates to: KCHRSCIPRNCIINT*PETTLSTLLETAMK
Trigger: TTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGTATTAATGATACAATTCCGTGGTATACAGCTCCTGTGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGCCTGGCCAACATGGTaGACCCCTATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNAWPTW*TPISTK
Trigger: TTTAGTAGAGATAGGGGTTCACCATGTTGGCCAGGC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
3UTR-3UTR GCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAGGACAAGTTTTTAAATaGACATGCCCTACTAGGTGC +
Preference number: 2 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKGQVFK*TCPTRC
Trigger: GCACCTAGTAGGGCATGTGCATTTAAAAACTTGTCC...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTCAACAGCTAGGTCACTaGTCTGTTTTTCACAAATTG +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPQQLGH*SVFHKL
Trigger: CAATTTGTGAAAAACAGAGCAGTGACCTAGCTGTTG...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAAACGTGCTTTGCATCTaGTTTCTTATGGTACATTCT +
Preference number: 2 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKNVLCI*FLMVHS
Trigger: AGAATGTACCATAAGAAATCAGATGCAAAGCACGTT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATAGAAATAAATCAGACTaGGCGCTGTGGCAGCACTCT +
Preference number: 2 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNRNKSD*ALWQHS
Trigger: AGAGTGCTGCCACAGCGCTCAGTCTGATTTATTTCT...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
3UTR-3UTR CCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTACAAATACATTCCTGTaGAAGAAGGAACATACAGGA +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPTNTFL*KKEHTG
Trigger: TCCTGTATGTTCCTTCTTCCACAGGAATGTATTTGT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CAA 90 bp AAAACTAGAGTTGCACATTTGAAAACATTAATTCTAAGCAATGATTaGTCATCACTGCATCAAGTCCACGCTCACACTCCAGCAACAGCA +
Preference number: 2 (lower is better)
Translates to: KTRVAHLKTLILSND*SSLHQVHAHTPATA
Trigger: TGCTGTTGCTGGAGTGTGAGCGTGGACTTGATGCAGTGATGACAAATCATTGCTTAGAATTAATGTTTTCAAATGTGCAACTCTAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTAGATCAAAGAACATATaGACAAATACATTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPRSKNI*TNTFLW
Trigger: CCACAGGAATGTATTTGTGCATATGTTCTTTGATCT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 72 bp AAGGACCTGACTGATATGTGTGCGAATGCCCTAAGATaGGAGTGCCAATGGGGTGGGCAGATAGTGGTCAAG +
Preference number: 3 (lower is better)
Translates to: KDLTDMCANALR*ECQWGGQIVVK
Trigger: CTTGACCACTATCTGCCCACCCCATTGGCACTCCCATCTTAGGGCATTCGCACACATATCAGTCAGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCATGCAGAGCAGGCACTaGGTAAATTTGTTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPMQSRH*VNLFAE
Trigger: TTCAGCAAACAAATTTACCAAGTGCCTGCTCTGCAT...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp CTGACTGATATGTGTGCGAATGCCCTAAGATGGGAGTaGCAATGGGGTGGGCAGATAGTGGTCAAGTCTAGA +
Preference number: 3 (lower is better)
Translates to: LTDMCANALRWE*QWGGQIVVKSR
Trigger: TCTAGACTTGACCACTATCTGCCCACCCCATTGGCACTCCCATCTTAGGGCATTCGCACACATATCAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCACTTTCCTCTCGGATTaGCAAGTGCCTGTAGCCTCA +
Preference number: 3 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVTFLSD*QVPVAS
Trigger: TGAGGCTACAGGCACTTGCAAATCCGAGAGGAAAGT...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp GACTGGTTACAGCTCCACTCTGTTCCTAATCCACAGTaGACACAGCACGCCAACTCTGTAGAGGATGACTAT +
Preference number: 3 (lower is better)
Translates to: DWLQLHSVPNPQ*TQHANSVEDDY
Trigger: ATAGTCATCCTCTACAGAGTTGGCGTGCTGTGTGCACTGTGGATTAGGAACAGAGTGGAGCTGTAACCAGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp CCACGCTCACACTCCAGCAACAGCAGATCCATTAACTaGCAAGTGCATTGGTTCCTAGCCATACAATGGCTA +
Preference number: 3 (lower is better)
Translates to: PRSHSSNSRSIN*QVHWFLAIQWL
Trigger: TAGCCATTGTATGGCTAGGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCAGCTCCTGCTACCCTTaGCTAATCCTTTTAGACTCT +
Preference number: 3 (lower is better)
Translates to: HQVHAHTPATADPLTAKCSSCYP*LILLDS
Trigger: AGAGTCTAAAAGGATTAGCAAAGGGTAGCAGGAGCT...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCCTGGGTCTTTGGTTTTaGTCTAGAATTGTGGCCATG +
Preference number: 3 (lower is better)
Translates to: HQVHAHTPATADPLTAKCLGLWF*SRIVAM
Trigger: CATGGCCACAATTCTAGACAAAAACCAAAGACCCAG...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGTCAGAAGGTCCTACTTaGCTCTGGCCTCTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: TLPETTLSTLLETAMKRESEGPT*LWPLGL
Trigger: AAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGA...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCATGCAGAGCAGGCACTaGGTAAATTTGTTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: HAHTPATADPLTAKCIGSMQSRH*VNLFAE
Trigger: TTCAGCAAACAAATTTACCAAGTGCCTGCTCTGCAT...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCTGTATCATTAATACCTaGCCTGAAACCACACTCTCC +
Preference number: 3 (lower is better)
Translates to: HAHTPATADPLTAKCIGSCIINT*PETTLS
Trigger: GGAGAGTGTGGTTTCAGGCAAGGTATTAATGATACA...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCCTGGGTCTTTGGTTTTaGTCTAGAATTGTGGCCATG +
Preference number: 3 (lower is better)
Translates to: GSHIIHILENRDWGACFALGLWF*SRIVAM
Trigger: CATGGCCACAATTCTAGACAAAAACCAAAGACCCAG...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 72 bp CATACTCTTAATGATAAGAAGAGCCACCAGGGGATTTaGAGAGACAGGCAAAGGGCCATAGCAACGGTAACA +
Preference number: 3 (lower is better)
Translates to: HTLNDKKSHQGI*RDRQRAIATVT
Trigger: TGTTACCGTTGCTATGGCCCTTTGCCTGTCTCTCCAAATCCCCTGGTGGCTCTTCTTATCATTAAGAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCGCAATGAAAAGAGAGTaGAAACACAGTCTCTCTATA +
Preference number: 3 (lower is better)
Translates to: HQVHAHTPATADPLTAKCAMKRE*KHSLSI
Trigger: TATAGAGAGACTGTGTTTCAACTCTCTTTTCATTGC...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTaGTCTGTTTTTCACAAATTGGAGGGGGTGGAAACT +
Preference number: 3 (lower is better)
Translates to: YMAVMMMQQLGH*SVFHKLEGVET
Trigger: AGTTTCCACCCCCTCCAATTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAACTTTCCTCTCGGATTaGCAAGTGCCTGTAGCCTCA +
Preference number: 3 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKTFLSD*QVPVAS
Trigger: TGAGGCTACAGGCACTTGCAAATCCGAGAGGAAAGT...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR TCA 72 bp TCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTaGAATGCCTCTGTCTCAAAGGAGACATTTTGCAAA +
Preference number: 3 (lower is better)
Translates to: SDAQNTSWWVSI*NASVSKETFCK
Trigger: TTTGCAAAATGTCTCCTTTGAGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR TCA 72 bp GTTGTTGCTACATACTCTTTATACAGAGACCAGCTATaGAAGACGGCACTTTCCTCTCGGATTTGCAAGTGC +
Preference number: 3 (lower is better)
Translates to: VVATYSLYRDQL*KTALSSRICKC
Trigger: GCACTTGCAAATCCGAGAGGAAAGTGCCGTCTTTCATAGCTGGTCTCTGTATAAAGAGTATGTAGCAACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp TGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATaGCTCTGTCTCAAAGGAGACATTTTGCAAAGAGTT +
Preference number: 3 (lower is better)
Translates to: CPEHLMVGIYLK*LCLKGDILQRV
Trigger: AACTCTTTGCAAAATGTCTCCTTTGAGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTaGTCTGGCCTCTGGGTCTTTGGTTTTTGTCTAGAA +
Preference number: 3 (lower is better)
Translates to: DTPVVNLQKVLL*SGLWVFGFCLE
Trigger: TTCTAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp GGAGCTGTATACCACGGAATTGTATCATTAATACCTTaGCTGAAACCACACTCTCCACTCTTCTGGAAACAG +
Preference number: 3 (lower is better)
Translates to: GAVYHGIVSLIP*LKPHSPLFWKQ
Trigger: CTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGTATTAATGATACAATTCCGTGGTATACAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGGTTTTTGTCTAGAATaGTGGCCATGTGAGAGACTG +
Preference number: 3 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKGFCLE*WPCERL
Trigger: CAGTCTCTCACATGGCCACAATTCTAGACAAAAACC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR-3UTR CAA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAGGTTTTTGTCTAGAATaGTGGCCATGTGAGAGACTG +
Preference number: 3 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTGFCLE*WPCERL
Trigger: CAGTCTCTCACATGGCCACAATTCTAGACAAAAACC...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp AGAAAGAAGGTAGTAACTAATGCCACAAAATTCCAATaGTGGCATTTCCTGAATTCCCTGAAGCTCCTGCTA +
Preference number: 3 (lower is better)
Translates to: RKKVVTNATKFQ*WHFLNSLKLLL
Trigger: TAGCAGGAGCTTCAGGGAATTCAGGAAATGCCAGCATTGGAATTTTGTGGCATTAGTTACTACCTTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 72 bp TCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTaGTTCCTAGCCATACAATGGCTAACATTTCATTTT +
Preference number: 3 (lower is better)
Translates to: SSNSRSINCQVH*FLAIQWLTFHF
Trigger: AAAATGAAATGTTAGCCATTGTATGGCTAGGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CCA 72 bp ATTAACTGCCAAGTGCATTGGTTCCTAGCCATACAATaGCTAACATTTCATTTTCACGGTAAGAGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: INCQVHWFLAIQ*LTFHFHGKRSK
Trigger: TTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTGTATGGCTAGGAACCAATGCACTTGGCAGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR GCA 72 bp ATCAGGTCCACTTCATCTCGGATGTTAAACAGTTGTTaGTACATACTCTTTATACAGAGACCAGCTATGAAA +
Preference number: 3 (lower is better)
Translates to: IRSTSSRMLNSC*YILFIQRPAMK
Trigger: TTTCATAGCTGGTCTCTGTATAAAGAGTATGTAGCAACAACTGTTTAACATCCGAGATGAAGTGGACCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCCCCGGCAGCGAGCAGTaGGTCGCGGTCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSPGSEQ*VAVRAP
Trigger: AGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGG...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCCTGCCGGGACCAAAGTaGACCTCGCCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSLPGPK*TSPPPQ
Trigger: CTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAG...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTGCCGGGACCAAAGTaGACCTCGCCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPLPGPK*TSPPPQ
Trigger: CTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAG...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCGGGACTCTTCCCCGCTaGGGTGACTCAGGACGCGAC +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPGTLPR*GDSGRD
Trigger: GTCGCGTCCTGAGTCACCGCAGCGGGGAAGAGTCCC...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCTCCGCGGCGACTCCGTaGCTTCTCGCTCGCTTCGCG +
Preference number: 4 (lower is better)
Translates to: HQVHAHTPATADPLTAKCSAATP*LLARFA
Trigger: CGCGAAGCGAGCGAGAAGGCACGGAGTCGCCGCGGA...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCGCGAATGCCCTAAGATaGGAGTGCCAATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSANALR*ECQWGG
Trigger: CCCACCCCATTGGCACTCCCATCTTAGGGCATTCGC...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCTCTTCCCCGCTGCGGTaGCTCAGGACGCGACGGCCA +
Preference number: 4 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVSSPLR*LRTRRP
Trigger: TGGCCGTCGCGTCCTGAGTCACCGCAGCGGGGAAGA...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCGCCCTAAGATGGGAGTaGCAATGGGGTGGGCAGATA +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSALRWE*QWGGQI
Trigger: TATCTGCCCACCCCATTGGCACTCCCATCTTAGGGC...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCACCCACCCCTCACAGTaGCTTATGCAGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPTHPSQ*LMQSRH
Trigger: GTGCCTGCTCTGCATAAGGCACTGTGAGGGGTGGGT...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCGGCAAAAGTGCAAGCTaGCATAAAGGCAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSGKSAS*HKGKGP
Trigger: TGGCCCTTTGCCTTTATGTCAGCTTGCACTTTTGCC...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCAACAGGAAAGCAACCTaGGCTCCGCGGCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSNRKAT*APRRLR
Trigger: ACGGAGTCGCCGCGGAGCGCAGGTTGCTTTCCTGTT...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCAACAGGAAAGCAACCTaGGCTCCGCGGCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: HQVHAHTPATADPLTAKCNRKAT*APRRLR
Trigger: ACGGAGTCGCCGCGGAGCGCAGGTTGCTTTCCTGTT...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCGTTCCTAATCCACAGTaGACACAGCACGCCAACTCT +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSVPNPQ*TQHANS
Trigger: AGAGTTGGCGTGCTGTGTGCACTGTGGATTAGGAAC...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCGGCCAGAGAAGAGACTaGTTACAGCTCCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSGQRRD*LQLHSV
Trigger: AACAGAGTGGAGCTGTAACCAGTCTCTTCTCTGGCC...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCCGCGGTCAGAGCCCCTaGCGGGACCAAAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: GSHIIHILENRDWGACFARGQSP*RDQSEP
Trigger: AGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCG...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTCGCGGTCAGAGCCCCTaGCGGGACCAAAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSRGQSP*RDQSEP
Trigger: AGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCG...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTCCCGGCAGCGAGCAGTaGGTCGCGGTCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPPGSEQ*VAVRAP
Trigger: AGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGG...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGATCTTCCCCGCTGCGGTaGCTCAGGACGCGACGGCCA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERSSPLR*LRTRRP
Trigger: TGGCCGTCGCGTCCTGAGTCACCGCAGCGGGGAAGA...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCCATCTGATGAGCTCGTaGTTGAGTCACAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPHLMSS*LSHKSG
Trigger: ACCTGACTTGTGACTCAAGCACGAGCTCATCAGATG...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAATCCGCGGCGACTCCGTaGCTTCTCGCTCGCTTCGCG +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKSAATP*LLARFA
Trigger: CGCGAAGCGAGCGAGAAGGCACGGAGTCGCCGCGGA...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCACCCACCCCTCACAGTaGCTTATGCAGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVTHPSQ*LMQSRH
Trigger: GTGCCTGCTCTGCATAAGGCACTGTGAGGGGTGGGT...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCCTTCCCCTCCCCCTCTaGATCTTAATATCCAAATCT +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSLPLPL*ILISKS
Trigger: AGATTTGGATATTAAGATGCAGAGGGGGAGGGGAAG...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCCTTTGCTCTGGCCTCTaGGTCTTTGGTTTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSLCSGL*VFGFCL
Trigger: TAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAG...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCACACCACCTCGAGGATaGACACACCTTGCATGTTCC +
Preference number: 4 (lower is better)
Translates to: HQVHAHTPATADPLTAKCTPPRG*THLACS
Trigger: GGAACATGCAAGGTGTGTTCATCCTCGAGGTGGTGT...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCTTCAACTTTTCCCACTaGCTCCTCCATCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSFNFSH*LLHLHF
Trigger: GAAATGAAGATGGAGGAGGCAGTGGGAAAAGTTGAA...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTGGGACTCTTCCCCGCTaGGGTGACTCAGGACGCGAC +
Preference number: 4 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPGTLPR*GDSGRD
Trigger: GTCGCGTCCTGAGTCACCGCAGCGGGGAAGAGTCCC...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCCACATTTACCACTTCTaGGTCAGAGTTGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPHIYHF*VRVGVR
Trigger: TCTGACACCAACTCTGACCCAGAAGTGGTAAATGTG...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615052.5
CDS-3UTR TCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCACAAGATTCAAAAACTaGAACCCATTTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSTRFKN*NPFCLA
Trigger: TGCCAGGCAAAATGGGTTTCAGTTTTTGAATCTTGT...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTGAGGCAGGCAGACACTaGTGCATGTGTATGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSEAGRH*CMCMCG
Trigger: ACCGCACATACACATGCATCAGTGTCTGCCTGCCTC...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCTTCAACTTTTCCCACTaGCTCCTCCATCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPFNFSH*LLHLHF
Trigger: GAAATGAAGATGGAGGAGGCAGTGGGAAAAGTTGAA...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCGTGCCAATAAGGACCTaGCTGATATGTGTGCGAATG +
Preference number: 4 (lower is better)
Translates to: HQVHAHTPATADPLTAKCVPIRT*LICVRM
Trigger: CATTCGCACACATATCAGTCAGGTCCTTATTGGCAC...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCTACAGAGACCAGCTATaGAAGACGGCACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HQVHAHTPATADPLTAKCYRDQL*KTALSS
Trigger: AGAGGAAAGTGCCGTCTTTCATAGCTGGTCTCTGTA...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCAACGTGCTTTGCATCTaGTTTCTTATGGTACATTCT +
Preference number: 4 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSNVLCI*FLMVHS
Trigger: AGAATGTACCATAAGAAATCAGATGCAAAGCACGTT...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCCCGGCAGCGAGCAGTaGGTCGCGGTCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNPGSEQ*VAVRAP
Trigger: AGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR CCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTAGCCACCAGGGGATTTaGAGAGACAGGCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGSHQGI*RDRQRA
Trigger: GGCCCTTTGCCTGTCTCTCCAAATCCCCTGGTGGCT...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTTGCTTTTGGCTCCGATaGCCTTTAACCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSCFWLR*PLTLAT
Trigger: AGTCGCCAAGGTTAAAGGTCATCGGAGCCAAAAGCA...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCTGCCGGGACCAAAGTaGACCTCGCCGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNLPGPK*TSPPPQ
Trigger: CTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATTCTTCCCCGCTGCGGTaGCTCAGGACGCGACGGCCA +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNSSPLR*LRTRRP
Trigger: TGGCCGTCGCGTCCTGAGTCACCGCAGCGGGGAAGA...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR TCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCAATCCTGGATCCAAATaGCCTGCCTCTGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: GSHIIHILENRDWGACFANPGSK*PASAFS
Trigger: GCTGAATGCAGAGGCAGGTCATTTGGATCCAGGATT...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615052.5
CDS-3UTR GCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCGTTATATTTCTTCCTTaGAGCAGCCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSVIFLP*SSLPFL
Trigger: CAGAAACGGGAGGCTGCTGCAAGGAAGAAATATAAC...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATTCCGCGGCGACTCCGTaGCTTCTCGCTCGCTTCGCG +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNSAATP*LLARFA
Trigger: CGCGAAGCGAGCGAGAAGGCACGGAGTCGCCGCGGA...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCAGGATGAACACACCTTaGATGTTCCTGAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVRMNTP*MFLNSH
Trigger: GTGGGAGTTCAGGAACATGCAAGGTGTGTTCATCCT...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTGTTCCTAATCCACAGTaGACACAGCACGCCAACTCT +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSVPNPQ*TQHANS
Trigger: AGAGTTGGCGTGCTGTGTGCACTGTGGATTAGGAAC...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAAGCCACCAGGGGATTTaGAGAGACAGGCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKSHQGI*RDRQRA
Trigger: GGCCCTTTGCCTGTCTCTCCAAATCCCCTGGTGGCT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCCAATCTGAGGAAGTTTaGTTAGGGCACAATCATTTT +
Preference number: 4 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPQSEEV*LGHNHF
Trigger: AAAATGATTGTGCCCTAACCAAACTTCCTCAGATTG...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCGCAGAGGAAACACAGTaGCATTGTATTACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: HQVHAHTPATADPLTAKCAEETQ*HCITVG
Trigger: ACCTACTGTAATACAATGTCACTGTGTTTCCTCTGC...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTTACAGAGACCAGCTATaGAAGACGGCACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSYRDQL*KTALSS
Trigger: AGAGGAAAGTGCCGTCTTTCATAGCTGGTCTCTGTA...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGGGACTCTTCCCCGCTaGGGTGACTCAGGACGCGAC +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNGTLPR*GDSGRD
Trigger: GTCGCGTCCTGAGTCACCGCAGCGGGGAAGAGTCCC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCGGTATCTATCTGAAATaGCTCTGTCTCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSGIYLK*LCLKGD
Trigger: GTCTCCTTTGAGACAGAGGCATTTCAGATAGATACC...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCCAATTATCTGTGCTGTaGGAAGTCAACAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSQLSVL*EVNRSK
Trigger: TTTGCTCCTGTTGACTTCCCACAGCACAGATAATTG...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCACATCATACACATATTaGAGAACAGGGATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSTSYTY*RTGIGE
Trigger: CTCCCCAATCCCTGTTCTCCAATATGTGTATGATGT...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAGAGGCAGGCAGACACTaGTGCATGTGTATGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTEAGRH*CMCMCG
Trigger: ACCGCACATACACATGCATCAGTGTCTGCCTGCCTC...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCAAACAGTGCACAATCTaGGGAAGTTTGGTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSHIIHILENRDWGACFAKQCTI*GSLVRA
Trigger: TGCCCTAACCAAACTTCCTCAGATTGTGCACTGTTT...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCGCGGTCAGAGCCCCTaGCGGGACCAAAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNRGQSP*RDQSEP
Trigger: AGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAGCCCTAAGATGGGAGTaGCAATGGGGTGGGCAGATA +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTALRWE*QWGGQI
Trigger: TATCTGCCCACCCCATTGGCACTCCCATCTTAGGGC...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTACACGGGAAATCACCTaGTGTGTGGAATTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSTREIT*CVELGK
Trigger: TTTTCCCAATTCCACACAGCAGGTGATTTCCCGTGT...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAGGAGTGCCAATGGGGTaGGCAGATAGTGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTGVPMG*ADSGQV
Trigger: GACTTGACCACTATCTGCCCACCCCATTGGCACTCC...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAAGATGGGAGTGCCAATaGGGTGGGCAGATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTRWECQ*GGQIVV
Trigger: GACCACTATCTGCCCACCCCATTGGCACTCCCATCT...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTGGCCAGAGAAGAGACTaGTTACAGCTCCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGGQRRD*LQLHSV
Trigger: AACAGAGTGGAGCTGTAACCAGTCTCTTCTCTGGCC...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAATGCTTTTGGCTCCGATaGCCTTTAACCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKCFWLR*PLTLAT
Trigger: AGTCGCCAAGGTTAAAGGTCATCGGAGCCAAAAGCA...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAACACCACCTCGAGGATaGACACACCTTGCATGTTCC +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTTPPRG*THLACS
Trigger: GGAACATGCAAGGTGTGTTCATCCTCGAGGTGGTGT...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGGCAAAAGTGCAAGCTaGCATAAAGGCAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKGKSAS*HKGKGP
Trigger: TGGCCCTTTGCCTTTATGTCAGCTTGCACTTTTGCC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCGAAGACAATGTCCTGTaGAGCATAAAGAACTACTTA +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSEDNVL*SIKNYL
Trigger: TAAGTAGTTCTTTATGCTTCACAGGACATTGTCTTC...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATAACAGGAAAGCAACCTaGGCTCCGCGGCGACTCCGT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNNRKAT*APRRLR
Trigger: ACGGAGTCGCCGCGGAGCGCAGGTTGCTTTCCTGTT...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGCTTAATACCTTCAGATaGCCAGAACACCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: TLPETTLSTLLETAMKRELNTFR*PEHLMV
Trigger: CACCATGAGGTGTTCTGGGCATCTGAAGGTATTAAG...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGACAGAAGGTCCTACTTTaGTCTGGCCTCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERQKVLL*SGLWVF
Trigger: AAAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTG...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCAGCAGATCCATTAACTaGCAAGTGCATTGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: GSHIIHILENRDWGACFASRSIN*QVHWFL
Trigger: TAGGAACCAATGCACTTGGCAGTTAATGGATCTGCT...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGAACTGCCAAGTGCATTaGTTCCTAGCCATACAATGG +
Preference number: 4 (lower is better)
Translates to: TLPETTLSTLLETAMKRENCQVH*FLAIQW
Trigger: CCATTGTATGGCTAGGAACCAATGCACTTGGCAGTT...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGGGCTTCGGACTCAATaGGTTCTTCAACTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKGLRTQ*VLQLFP
Trigger: TGGGAAAAGTTGAAGAACTCATTGAGTCCGAAGCCC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCAACGTGCTTTGCATCTaGTTTCTTATGGTACATTCT +
Preference number: 4 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVNVLCI*FLMVHS
Trigger: AGAATGTACCATAAGAAATCAGATGCAAAGCACGTT...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTAAACAGTGCACAATCTaGGGAAGTTTGGTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGKQCTI*GSLVRA
Trigger: TGCCCTAACCAAACTTCCTCAGATTGTGCACTGTTT...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAAGGATGAACACACCTTaGATGTTCCTGAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERRMNTP*MFLNSH
Trigger: GTGGGAGTTCAGGAACATGCAAGGTGTGTTCATCCT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGCATGTCAATTATCTGTaGTGTGGGAAGTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: TLPETTLSTLLETAMKREHVNYL*CGKSTG
Trigger: TCCTGTTGACTTCCCACAGCACAGATAATTGACATG...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATTGGTTCCAGATCAAAGAACATATaGACAAATACATTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HAHTPATADPLTAKCIGSRSKNI*TNTFLW
Trigger: CCACAGGAATGTATTTGTGCATATGTTCTTTGATCT...GGAACCAATGCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAACAGAAGGTCCTACTTTaGTCTGGCCTCTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKQKVLL*SGLWVF
Trigger: AAAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTG...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTGTATCATTAATACCTTaGCTGAAACCACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSVSLIP*LKPHSP
Trigger: TGGAGAGTGTGGTTTCAGGCAAGGTATTAATGATAC...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTTCCAAATCTCCGTTCTaGTCCATTAAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGSKSPF*SIKSGS
Trigger: ACTGCCTGACTTAATGGACCAGAACGGAGATTTGGA...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTAGAGGCCAGATCAAATaGGATGCTATCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGRGQIK*DAIRED
Trigger: ATCTTCTCTGATAGCATCTCATTTGATCTGGCCTCT...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAGCAGAGAGATTACTCTaGAGACAATGTCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERAERLL*RQCPVK
Trigger: CTTCACAGGACATTGTCTTCAGAGTAATCTCTCTGC...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGTTATATTTCTTCCTTaGAGCAGCCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKVIFLP*SSLPFL
Trigger: CAGAAACGGGAGGCTGCTGCAAGGAAGAAATATAAC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACACATCTGATGAGCTCGTaGTTGAGTCACAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTHLMSS*LSHKSG
Trigger: ACCTGACTTGTGACTCAAGCACGAGCTCATCAGATG...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTGGACAAGTTTTTAAATaGACATGCCCTACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGGQVFK*TCPTRC
Trigger: GCACCTAGTAGGGCATGTGCATTTAAAAACTTGTCC...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAACTTCACTCCCCCTGTaGAGAGTACATAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERTSLPL*RVHSVL
Trigger: TAGAACACTATGTACTCTGCACAGGGGGAGTGAAGT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAACTTCACTCCCCCTGTaGAGAGTACATAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKTSLPL*RVHSVL
Trigger: TAGAACACTATGTACTCTGCACAGGGGGAGTGAAGT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGGTATCATTAATACCTTaGCTGAAACCACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLPETTLSTLLETAMKREVSLIP*LKPHSP
Trigger: TGGAGAGTGTGGTTTCAGGCAAGGTATTAATGATAC...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTTGGATCCAAATGACCTaGTATCTCTGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGWIQMT*YLCSDC
Trigger: ACAATCACTGCAGAGATACCAGGTCATTTGGATCCA...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619301.4
CDS-3UTR CCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTTCCAAATCTCCGTTCTaGTCCATTAAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPSKSPF*SIKSGS
Trigger: ACTGCCTGACTTAATGGACCAGAACGGAGATTTGGA...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTCAATCTGAGGAAGTTTaGTTAGGGCACAATCATTTT +
Preference number: 4 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSQSEEV*LGHNHF
Trigger: AAAATGATTGTGCCCTAACCAAACTTCCTCAGATTG...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAAACTGCCAAGTGCATTaGTTCCTAGCCATACAATGG +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERNCQVH*FLAIQW
Trigger: CCATTGTATGGCTAGGAACCAATGCACTTGGCAGTT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CAA 72 bp AGGAGCTGTATACCACGGAATTGTATCATTAATACCTaGCCTGAAACCACACTCTCCACTCTTCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: RSCIPRNCIINT*PETTLSTLLET
Trigger: TGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGTATTAATGATACAATTCCGTGGTATACAGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAGCAGAGGAAACACAGTaGCATTGTATTACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERAEETQ*HCITVG
Trigger: ACCTACTGTAATACAATGTCACTGTGTTTCCTCTGC...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGGAAGACAATGTCCTGTaGAGCATAAAGAACTACTTA +
Preference number: 4 (lower is better)
Translates to: TLPETTLSTLLETAMKREEDNVL*SIKNYL
Trigger: TAAGTAGTTCTTTATGCTTCACAGGACATTGTCTTC...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAGCAGAGAGATTACTCTaGAGACAATGTCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTAERLL*RQCPVK
Trigger: CTTCACAGGACATTGTCTTCAGAGTAATCTCTCTGC...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAACTGGTACTACTGTCCTaGAGCAGGTTATATTTCTTC +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKLVLLS*SRLYFF
Trigger: GAAGAAATATAACCTGCTGCAGGACAGTAGTACCAG...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTGGACAAGTTTTTAAATaGACATGCCCTACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPGQVFK*TCPTRC
Trigger: GCACCTAGTAGGGCATGTGCATTTAAAAACTTGTCC...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGGTATCTATCTGAAATaGCTCTGTCTCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKGIYLK*LCLKGD
Trigger: GTCTCCTTTGAGACAGAGGCATTTCAGATAGATACC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACACTTAATACCTTCAGATaGCCAGAACACCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTLNTFR*PEHLMV
Trigger: CACCATGAGGTGTTCTGGGCATCTGAAGGTATTAAG...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAACACGGGAAATCACCTaGTGTGTGGAATTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKTREIT*CVELGK
Trigger: TTTTCCCAATTCCACACAGCAGGTGATTTCCCGTGT...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACACTTCCCCTCCCCCTCTaGATCTTAATATCCAAATCT +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTLPLPL*ILISKS
Trigger: AGATTTGGATATTAAGATGCAGAGGGGGAGGGGAAG...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAAGCAGATCCATTAACTaGCAAGTGCATTGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERSRSIN*QVHWFL
Trigger: TAGGAACCAATGCACTTGGCAGTTAATGGATCTGCT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTATGATTTGTCATCACTaGATCAAGTCCACGCTCACA +
Preference number: 4 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPMICHH*IKSTLT
Trigger: TGTGAGCGTGGACTTGATGCAGTGATGACAAATCAT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAATGATTTGTCATCACTaGATCAAGTCCACGCTCACA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERMICHH*IKSTLT
Trigger: TGTGAGCGTGGACTTGATGCAGTGATGACAAATCAT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGACAATTATCTGTGCTGTaGGAAGTCAACAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERQLSVL*EVNRSK
Trigger: TTTGCTCCTGTTGACTTCCCACAGCACAGATAATTG...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACACTTTGCTCTGGCCTCTaGGTCTTTGGTTTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTLCSGL*VFGFCL
Trigger: TAGACAAAAACCAAAGACCCAGAGGCCAGAGCAAAG...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAACATCATACACATATTaGAGAACAGGGATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKTSYTY*RTGIGE
Trigger: CTCCCCAATCCCTGTTCTCCAATATGTGTATGATGT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCTTCCTAGCCATACAATaGCTAACATTTCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: GSHIIHILENRDWGACFAFLAIQ*LTFHFH
Trigger: GTGAAAATGAAATGTTAGCCATTGTATGGCTAGGAA...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATTGCTTTTGGCTCCGATaGCCTTTAACCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNCFWLR*PLTLAT
Trigger: AGTCGCCAAGGTTAAAGGTCATCGGAGCCAAAAGCA...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR TCA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAACAAGATTCAAAAACTaGAACCCATTTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKTRFKN*NPFCLA
Trigger: TGCCAGGCAAAATGGGTTTCAGTTTTTGAATCTTGT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR TCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAAGAGGCCAGATCAAATaGGATGCTATCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTRGQIK*DAIRED
Trigger: ATCTTCTCTGATAGCATCTCATTTGATCTGGCCTCT...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACATGGCCTCTGGGTCTTTaGTTTTTGTCTAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTWPLGL*FLSRIV
Trigger: CACAATTCTAGACAAAAACCAAAGACCCAGAGGCCA...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAATGGCCTCTGGGTCTTTaGTTTTTGTCTAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKWPLGL*FLSRIV
Trigger: CACAATTCTAGACAAAAACCAAAGACCCAGAGGCCA...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACAACAAATTGGAGGGGGTaGAAACTTAACCAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTTNWRG*KLNQVS
Trigger: ACTGACTTGGTTAAGTTTCCACCCCCTCCAATTTGT...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAAGCAAAAGGCTTCAATaGCCTCTGTACTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERSKRLQ*PLYSLR
Trigger: TCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATACAGAACCCCGTCCCTaGTATCTCTGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNTEPRP*YLCSDC
Trigger: ACAATCACTGCAGAGATACCAGGGACGGGGTTCTGT...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR TCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGGGCTTCGGACTCAATaGGTTCTTCAACTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNGLRTQ*VLQLFP
Trigger: TGGGAAAAGTTGAAGAACTCATTGAGTCCGAAGCCC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCATCTGATGAGCTCGTaGTTGAGTCACAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNHLMSS*LSHKSG
Trigger: ACCTGACTTGTGACTCAAGCACGAGCTCATCAGATG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACACAACAGCTAGGTCACTaGTCTGTTTTTCACAAATTG +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTQQLGH*SVFHKL
Trigger: CAATTTGTGAAAAACAGAGCAGTGACCTAGCTGTTG...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAACAACAGCTAGGTCACTaGTCTGTTTTTCACAAATTG +
Preference number: 4 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKQQLGH*SVFHKL
Trigger: CAATTTGTGAAAAACAGAGCAGTGACCTAGCTGTTG...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAACAAATACATTCCTGTaGAAGAAGGAACATACAGGA +
Preference number: 4 (lower is better)
Translates to: DMSIICAVGSQQEQTQERTNTFL*KKEHTG
Trigger: TCCTGTATGTTCCTTCTTCCACAGGAATGTATTTGT...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAAGCAAAAGGCTTCAATaGCCTCTGTACTCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKSKRLQ*PLYSLR
Trigger: TCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCT...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
3UTR CAA 72 bp CTAGAATTGTGGCCATGTGAGAGACTGATATATGAGTaGCTAAAGCTGGAGGTTCATGATCTTAAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LELWPCERLIYE*LKLEVHDLKSL
Trigger: AAGGCTTTTAAGATCATGAACCTCCAGCTTTAGCAACTCATATATCAGTCTCTCACATGGCCACAATTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGTTATATTTCTTCCTTaGAGCAGCCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNVIFLP*SSLPFL
Trigger: CAGAAACGGGAGGCTGCTGCAAGGAAGAAATATAAC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCTGGTACTACTGTCCTaGAGCAGGTTATATTTCTTC +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNLVLLS*SRLYFF
Trigger: GAAGAAATATAACCTGCTGCAGGACAGTAGTACCAG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATTTCAACTTTTCCCACTaGCTCCTCCATCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNFNFSH*LLHLHF
Trigger: GAAATGAAGATGGAGGAGGCAGTGGGAAAAGTTGAA...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR GCA 90 bp GGTAAGAGGAGCAAAAGGCTTCAATGGCCTCTGTACTCTTTAAGAAACAAAACACCAATGACATTAACGTaGTTTGCATCTGATTTCTTA +
Preference number: 4 (lower is better)
Translates to: GKRSKRLQWPLYSLRNKTPMTLT*FASDFL
Trigger: TAAGAAATCAGATGCAAAGCACGTTAATGTCATTGG...TGTTTTGTTTCTTAAAGAGTACAGAGGCCATTGAAGCCTTTTGCTCCTCTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CCA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATAGCAAACAAACAGTTTaGTTGCAACTTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNSKQTV*LQLPLT
Trigger: AGTTAGTGGAAGTTGCAACCAAACTGTTTGTTTGCT...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS GCA 90 bp CGGAACAAGCCCCGGCAGCGAGCAGTGGGTCGCGGTCAGAGCCCCTaGCGGGACCAAAGTGAACCTCGCCGCCTCCGCAGCCTCTACCAC +
Preference number: 5 (lower is better)
Translates to: RNKPRQRAVGRGQSP*RDQSEPRRLRSLYH
Trigger: GTGGTAGAGGCTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGGGCTTGTTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS CCA 90 bp CACCGCCGCCTTCTCCTCCTCGGAACAAGCCCCGGCAGCGAGCAGTaGGTCGCGGTCAGAGCCCCTGCCGGGACCAAAGTGAACCTCGCC +
Preference number: 5 (lower is better)
Translates to: HRRLLLLGTSPGSEQ*VAVRAPAGTKVNLA
Trigger: GGCGAGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGGGCTTGTTCCGAGGAGGAGAAGGCGGCGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS TCA 90 bp GCAGCGAGCAGTGGGTCGCGGTCAGAGCCCCTGCCGGGACCAAAGTaGACCTCGCCGCCTCCGCAGCCTCTACCACCAAGTCCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: AASSGSRSEPLPGPK*TSPPPQPLPPSPFS
Trigger: ACTGAAGGGACTTGGTGGTAGAGGCTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCGACCCACTGCTCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS GCA 90 bp AGCTTGCGGTGTCTGAATCCCAGAGTCGCTCCAGCGGAGAGCCCGTaGCCTTCTCTCCCCGCTTTTTCGCGGATGCCGATAGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: SLRCLNPRVAPAESP*PSLPAFSRMPIAGL
Trigger: GAGCCCAGCTATCGGCATCCGCGAAAAAGCGGGGAGAGAAGGGCACGGGCTCTCCGCTGGAGCGACTCTGGGATTCAGACACCGCAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587591.5
ENST00000588730.1
CDS TCA 90 bp AAGCAACCCCCTCCTGAAGCCCTTCCGAAAGCAGCTTGCGGTGTCTaGATCCCAGAGTCGCTCCAGCGGAGAGCCCGTGCCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: KQPPPEALPKAACGV*IPESLQRRARALLS
Trigger: GGAGAGAAGGGCACGGGCTCTCCGCTGGAGCGACTCTGGGATTCAGACACCGCAAGCTGCTTTCGGAAGGGCTTCAGGAGGGGGTTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587591.5
CDS TCA 90 bp TTCTCTTCCCCTCCTGAAGCCCTTCCGAAAGCAGCTTGCGGTGTCTaGATCCCAGAGTCGCTCCAGCGGAGAGCCCGTGCCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FSSPPEALPKAACGV*IPESLQRRARALLS
Trigger: GGAGAGAAGGGCACGGGCTCTCCGCTGGAGCGACTCTGGGATTCAGACACCGCAAGCTGCTTTCGGAAGGGCTTCAGGAGGGGAAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588730.1
CDS TCA 90 bp CACTTTGAGAGGCCAAGGTGTGCAGATCGCTTAAGCCCAGGCGTCTaGGGCCAGCCTGAACAACATAACAGAACCCCGTCCCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: HFERPRCADRLSPGV*GQPEQHNRTPSLVS
Trigger: AGATACCAGGGACGGGGTTCTGTTATGTTGTTCAGGCTGGCCTCAGACGCCTGGGCTTAAGCGATCTGCACACCTTGGCCTCTCAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR CAA 90 bp ATTCATCTCAGCAGCCCCCAGAGCACCCACCCCTCACAGTGCCTTATGCAGAGCACTTTCCTCTCGGATTaGCAAGTGCCTGTAGCCTCA +
Preference number: 5 (lower is better)
Translates to: IHLSSPQSTHPSQCLMQSTFLSD*QVPVAS
Trigger: TGAGGCTACAGGCACTTGCAAATCCGAGAGGAAAGT...GCTCTGCATAAGGCACTGTGAGGGGTGGGTGCTCTGGGGGCTGCTGAGATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp ATGTGTATGTGCGGTGTGTGTCATTCATCTCAGCAGCCCCCAGAGCACCCACCCGAGGATGAACACACCTaGCATGTTCCTGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: MCMCGVCHSSQQPPEHPPEDEHT*HVPELP
Trigger: TGGGAGTTCAGGAACATGCAAGGTGTGTTCATCCTC...GGGTGGGTGCTCTGGGGGCTGCTGAGATGAATGACACACACCGCACATACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS GCA 90 bp GTGCTTGAGTCACAAGTCAGGTCACTATCACTGGTACTACTGTCCTaGAGCAGGTTATATTTCTTCCTTGCAGCAGCCTCCCGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: VLESQVRSLSLVLLS*SRLYFFLAAASRFC
Trigger: GCAGAAACGGGAGGCTGCTGCAAGGAAGAAATATAACCTGCTGCAGGACAGTAGTACCAGTGATAGTGACCTGACTTGTGACTCAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588730.1
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS-3UTR CAA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTACTTTCCTCTCGGATTaGCAAGTGCCTGTAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSTFLSD*QVPVAS
Trigger: TGAGGCTACAGGCACTTGCAAATCCGAGAGGAAAGT...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp CTTCAGATGCCCAGAACACCTCATGGTGGGTATCTATCTGAAATGCCTCTGTCTATTGGAGAACAGGGATaGGGGAGCTTGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: LQMPRTPHGGYLSEMPLSIGEQG*GSLLCL
Trigger: AAGGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAAT...AGACAGAGGCATTTCAGATAGATACCCACCATGAGGTGTTCTGGGCATCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS TCA 90 bp AGACCTCCCAAAACTGCCAGCACACACACAGGCAGTCACATACAGTaGCCCTGTACCTCAATCTACCATTTGATTCTCCAGGATTACCTT +
Preference number: 5 (lower is better)
Translates to: RPPKTASTHTGSHIQ*PCTSIYHLILQDYL
Trigger: AAGGTAATCCTGGAGAATCAAATGGTAGATTGAGGTACAGGGTCACTGTATGTGACTGCCTGTGTGTGTGCTGGCAGTTTTGGGAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS-3UTR CAA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCATGCAGAGCAGGCACTaGGTAAATTTGTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: HQVHAHTPATADPLTAKCMQSRH*VNLFAE
Trigger: TTCAGCAAACAAATTTACCAAGTGCCTGCTCTGCAT...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GATACACCAGTAGTGAATCTTCAGAAGGTCCTACTTTGCTCTGGCCTCTGGGTCCTGGGTCTTTGGTTTTaGTCTAGAATTGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: DTPVVNLQKVLLCSGLWVLGLWF*SRIVAM
Trigger: CATGGCCACAATTCTAGACAAAAACCAAAGACCCAG...GACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGAAGATTCACTACTGGTGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp CATCAAGTCCACGCTCACACTCCAGCAACAGCAGATCCATTAACTGCCAAGTGCTGTATCATTAATACCTaGCCTGAAACCACACTCTCC +
Preference number: 5 (lower is better)
Translates to: HQVHAHTPATADPLTAKCCIINT*PETTLS
Trigger: GGAGAGTGTGGTTTCAGGCAAGGTATTAATGATACA...GCACTTGGCAGTTAATGGATCTGCTGTTGCTGGAGTGTGAGCGTGGACTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTCTCCTTGGCTGTCTCTaGTTCAGATGCTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGLLGCL*FRCFWW
Trigger: CCACCAAAAGCATCTGAACAAGAGACAGCCAAGGAG...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGTCATTGAGTGGCGCATaGCCAGCAGATGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: TLPETTLSTLLETAMKRESLSGA*PADVLS
Trigger: TGACAAAACATCTGCTGGCAATGCGCCACTCAATGA...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCAGCTCCTGCTACCCTTaGCTAATCCTTTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: GSHIIHILENRDWGACFASSCYP*LILLDS
Trigger: AGAGTCTAAAAGGATTAGCAAAGGGTAGCAGGAGCT...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTTCATTGAGTGGCGCATaGCCAGCAGATGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGSLSGA*PADVLS
Trigger: TGACAAAACATCTGCTGGCAATGCGCCACTCAATGA...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGAGGATGAACACACCTaGCATGTTCCTGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKEDEHT*HVPELP
Trigger: TGGGAGTTCAGGAACATGCAAGGTGTGTTCATCCTC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGGGTTTTTGTCTAGAATaGTGGCCATGTGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: TLPETTLSTLLETAMKREGFCLE*WPCERL
Trigger: CAGTCTCTCACATGGCCACAATTCTAGACAAAAACC...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAATCAGAAGGTCCTACTTaGCTCTGGCCTCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKSEGPT*LWPLGL
Trigger: AAGACCCAGAGGCCAGAGCAAAGTAGGACCTTCTGA...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAATTGGAGAACAGGGATaGGGGAGCTTGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKIGEQG*GSLLCL
Trigger: AAGGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAAT...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGGCAGCCGCCAATAAATaGTCCACATTTACCACTTCT +
Preference number: 5 (lower is better)
Translates to: TLPETTLSTLLETAMKREAAANK*STFTTS
Trigger: AGAAGTGGTAAATGTGGACAATTTATTGGCGGCTGC...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615052.5
CDS-3UTR CAA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGGTTATATTTCTTCCTaGCAGCAGCCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKGYISS*QQPPVS
Trigger: AGAAACGGGAGGCTGCTGCAAGGAAGAAATATAACC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GACATGTCAATTATCTGTGCTGTGGGAAGTCAACAGGAGCAAACTCAAGAAAGAGGTTATATTTCTTCCTaGCAGCAGCCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: DMSIICAVGSQQEQTQERGYISS*QQPPVS
Trigger: AGAAACGGGAGGCTGCTGCAAGGAAGAAATATAACC...TCTTTCTTGAGTTTGCTCCTGTTGACTTCCCACAGCACAGATAATTGACATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GGAAGTCACATCATACACATATTGGAGAACAGGGATTGGGGAGCTTGCTTTGCCAGACTGATATATGAGTaGCTAAAGCTGGAGGTTCAT +
Preference number: 5 (lower is better)
Translates to: GSHIIHILENRDWGACFARLIYE*LKLEVH
Trigger: ATGAACCTCCAGCTTTAGCAACTCATATATCAGTCT...GGCAAAGCAAGCTCCCCAATCCCTGTTCTCCAATATGTGTATGATGTGACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTCTGGGTCTTTGGTTTTaGTCTAGAATTGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGLGLWF*SRIVAM
Trigger: CATGGCCACAATTCTAGACAAAAACCAAAGACCCAG...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp ACCTTGCCTGAAACCACACTCTCCACTCTTCTGGAAACAGCAATGAAAAGAGAGTGTATCATTAATACCTaGCCTGAAACCACACTCTCC +
Preference number: 5 (lower is better)
Translates to: TLPETTLSTLLETAMKRECIINT*PETTLS
Trigger: GGAGAGTGTGGTTTCAGGCAAGGTATTAATGATACA...CTCTCTTTTCATTGCTGTTTCCAGAAGAGTGGAGAGTGTGGTTTCAGGCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS TCA 90 bp GTGCCTATTCCTGAGGAGAATGTACTCAGTAATGATGCCGAACAGTaGGTATTAAATCTAAGCAGTGCCAAAAAGGCAATGATTGGGAGT +
Preference number: 5 (lower is better)
Translates to: VPIPEENVLSNDAEQ*VLNLSSAKKAMIGS
Trigger: ACTCCCAATCATTGCCTTTTTGGCACTGCTTAGATTTAATACTCACTGTTCGGCATCATTACTGAGTACATTCTCCTCAGGAATAGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS-3UTR CAA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAAGCTCCTGCTACCCTTaGCTAATCCTTTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKSSCYP*LILLDS
Trigger: AGAGTCTAAAAGGATTAGCAAAGGGTAGCAGGAGCT...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTAGACTGATATATGAGTaGCTAAAGCTGGAGGTTCAT +
Preference number: 5 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGRLIYE*LKLEVH
Trigger: ATGAACCTCCAGCTTTAGCAACTCATATATCAGTCT...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp GAGGAGAAAAATACCCAAATACAGCATCAGGTCCACTTCATCTCGGATGTTAAAGGTTTTTGTCTAGAATaGTGGCCATGTGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: EEKNTQIQHQVHFISDVKGFCLE*WPCERL
Trigger: CAGTCTCTCACATGGCCACAATTCTAGACAAAAACC...TTTAACATCCGAGATGAAGTGGACCTGATGCTGTATTTGGGTATTTTTCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCAGAATCTCAGCACTTaGAGAGGCCAAGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNQNLST*RGQGVQ
Trigger: CTGCACACCTTGGCCTCTCAAAGTGCTGAGATTCTG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS TCA 90 bp CGACATCCAAGAGATTCTGTTAGGCCCATCCAGCTTAAGTTCACCTaGATGTCCATGTTGTTGAACTCAAGTCAGTTCATAATTTATCCT +
Preference number: 5 (lower is better)
Translates to: RHPRDSVRPIQLKFT*MSMLLNSSQFIIYP
Trigger: AGGATAAATTATGAACTGACTTGAGTTCAACAACATGGACATTCAGGTGAACTTAAGCTGGATGGGCCTAACAGAATCTCTTGGATGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS-3UTR CAA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATCTCCTTGGCTGTCTCTaGTTCAGATGCTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNLLGCL*FRCFWW
Trigger: CCACCAAAAGCATCTGAACAAGAGACAGCCAAGGAG...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR CAA 90 bp GCCAATATTACTTCACTCCCCCTGTGCAGAGTACATAGTGTTCTAACTCTAGGTATTCTAAGCAATGATTaGTCATCACTGCATCAAGTC +
Preference number: 5 (lower is better)
Translates to: ANITSLPLCRVHSVLTLGILSND*SSLHQV
Trigger: GACTTGATGCAGTGATGACAAATCATTGCTTAGAAT...ACCTAGAGTTAGAACACTATGTACTCTGCACAGGGGGAGTGAAGTAATATTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATGGTTATATTTCTTCCTaGCAGCAGCCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNGYISS*QQPPVS
Trigger: AGAAACGGGAGGCTGCTGCAAGGAAGAAATATAACC...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS-3UTR CAA 90 bp TACATGGCAGTCATGATGATGCAACAGCTAGGTCACTGCTCTGTTTTTCACAAAGCAATGAAAAGAGAGTaGAAACACAGTCTCTCTATA +
Preference number: 5 (lower is better)
Translates to: YMAVMMMQQLGHCSVFHKAMKRE*KHSLSI
Trigger: TATAGAGAGACTGTGTTTCAACTCTCTTTTCATTGC...TTTGTGAAAAACAGAGCAGTGACCTAGCTGTTGCATCATCATGACTGCCATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS-3UTR CAA 90 bp CAATGGCTAACATTTCATTTTCACGGTAAGAGGAGCAAAAGGCTTCAATGGCCTATTCTAAGCAATGATTaGTCATCACTGCATCAAGTC +
Preference number: 5 (lower is better)
Translates to: QWLTFHFHGKRSKRLQWPILSND*SSLHQV
Trigger: GACTTGATGCAGTGATGACAAATCATTGCTTAGAAT...AGGCCATTGAAGCCTTTTGCTCCTCTTACCGTGAAAATGAAATGTTAGCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615052.5
ENST00000619301.4
CDS GCA 90 bp AGAACCATTCAGATACATCTTTCTTCCACTATGAAATCTCAAGACTaGCTTTGTATTATAGTACACAGTACCAGATGCAATAAGAATGGG +
Preference number: 5 (lower is better)
Translates to: RTIQIHLSSTMKSQD*LCIIVHSTRCNKNG
Trigger: CCCATTCTTATTGCATCTGGTACTGTGTACTATAATACAAAGGCAGTCTTGAGATTTCATAGTGGAAGAAAGATGTATCTGAATGGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS CCA 90 bp GATGTGCTAAAGTTCACTGGAAACCTCAGAACAGGTTTTATAAATTaGCCATGTCTTGTTAATAGACTGCAGTCTTCAAATTTACACAGA +
Preference number: 5 (lower is better)
Translates to: DVLKFTGNLRTGFIN*PCLVNRLQSSNLHR
Trigger: TCTGTGTAAATTTGAAGACTGCAGTCTATTAACAAGACATGGCCAATTTATAAAACCTGTTCTGAGGTTTCCAGTGAACTTTAGCACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS-3UTR CAA 90 bp AAACAAACAGTTTGGTTGCAACTTCCACTAACTTTCCTAAACTTCAGAGGAAATAAACAAACAGTTTGGTaGCAACTTCCACTAACTTTC +
Preference number: 5 (lower is better)
Translates to: KQTVWLQLPLTFLNFRGNKQTVW*QLPLTF
Trigger: GAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT...ATTTCCTCTGAAGTTTAGGAAAGTTAGTGGAAGTTGCAACCAAACTGTTTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS GCA 72 bp GCACGCACCGAACCCCCGGCCGGGACTCTTCCCCGCTaGGGTGACTCAGGACGCGACGGCCACCGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: ARTEPPAGTLPR*GDSGRDGHRRL
Trigger: AAGGCGGCGGTGGCCGTCGCGTCCTGAGTCACCGCAGCGGGGAAGAGTCCCGGCCGGGGGTTCGGTGCGTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS GCA 72 bp CCCCGGCAGCGAGCAGTGGGTCGCGGTCAGAGCCCCTaGCGGGACCAAAGTGAACCTCGCCGCCTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: PRQRAVGRGQSP*RDQSEPRRLRS
Trigger: GCTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS GCA 72 bp CAACAGGAAAGCAACCTGCGCTCCGCGGCGACTCCGTaGCTTCTCGCTCGCTTCGCGCGCGCCCCGTCGGGG +
Preference number: 6 (lower is better)
Translates to: QQESNLRSAATP*LLARFARAPSG
Trigger: CCCCGACGGGGCGCGCGCGAAGCGAGCGAGAAGGCACGGAGTCGCCGCGGAGCGCAGGTTGCTTTCCTGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS CCA 72 bp CTTCTCCTCCTCGGAACAAGCCCCGGCAGCGAGCAGTaGGTCGCGGTCAGAGCCCCTGCCGGGACCAAAGTG +
Preference number: 6 (lower is better)
Translates to: LLLLGTSPGSEQ*VAVRAPAGTKV
Trigger: CACTTTGGTCCCGGCAGGGGCTCTGACCGCGACCCACTGCTCGCTGCCGGGGCTTGTTCCGAGGAGGAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS TCA 72 bp AGTGGGTCGCGGTCAGAGCCCCTGCCGGGACCAAAGTaGACCTCGCCGCCTCCGCAGCCTCTACCACCAAGT +
Preference number: 6 (lower is better)
Translates to: SGSRSEPLPGPK*TSPPPQPLPPS
Trigger: ACTTGGTGGTAGAGGCTGCGGAGGCGGCGAGGTTCACTTTGGTCCCGGCAGGGGCTCTGACCGCGACCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615052.5
ENST00000615553.1
ENST00000619230.1
ENST00000619301.4
CDS TCA 72 bp CCTCCTGAAGCCCTTCCGAAAGCAGCTTGCGGTGTCTaGATCCCAGAGTCGCTCCAGCGGAGAGCCCGTGCC +
Preference number: 6 (lower is better)
Translates to: PPEALPKAACGV*IPESLQRRARA
Trigger: GGCACGGGCTCTCCGCTGGAGCGACTCTGGGATTCAGACACCGCAAGCTGCTTTCGGAAGGGCTTCAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587591.5
ENST00000588730.1
CDS GCA 72 bp TGTCTGAATCCCAGAGTCGCTCCAGCGGAGAGCCCGTaGCCTTCTCTCCCCGCTTTTTCGCGGATGCCGATA +
Preference number: 6 (lower is better)
Translates to: CLNPRVAPAESP*PSLPAFSRMPI
Trigger: TATCGGCATCCGCGAAAAAGCGGGGAGAGAAGGGCACGGGCTCTCCGCTGGAGCGACTCTGGGATTCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587591.5
ENST00000588730.1
CDS TCA 72 bp AGGCCAAGGTGTGCAGATCGCTTAAGCCCAGGCGTCTaGGGCCAGCCTGAACAACATAACAGAACCCCGTCC +
Preference number: 6 (lower is better)
Translates to: RPRCADRLSPGV*GQPEQHNRTPS
Trigger: GGACGGGGTTCTGTTATGTTGTTCAGGCTGGCCTCAGACGCCTGGGCTTAAGCGATCTGCACACCTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615553.1
CDS TCA 72 bp CCTGAGGAGAATGTACTCAGTAATGATGCCGAACAGTaGGTATTAAATCTAAGCAGTGCCAAAAAGGCAATG +
Preference number: 6 (lower is better)
Translates to: PEENVLSNDAEQ*VLNLSSAKKAM
Trigger: CATTGCCTTTTTGGCACTGCTTAGATTTAATACTCACTGTTCGGCATCATTACTGAGTACATTCTCCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS TCA 72 bp TTGAACGTGCCTCCTCTCTTCCCCAAAGTCATAAGGTaGCTCAGTAAACTGAAAGATACATCACTGTTACAT +
Preference number: 6 (lower is better)
Translates to: LNVPPLFPKVIR*LSKLKDTSLLH
Trigger: ATGTAACAGTGATGTATCTTTCAGTTTACTGAGTCACCTTATGACTTTGGGGAAGAGAGGAGGCACGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS TCA 72 bp AGAGATTCTGTTAGGCCCATCCAGCTTAAGTTCACCTaGATGTCCATGTTGTTGAACTCAAGTCAGTTCATA +
Preference number: 6 (lower is better)
Translates to: RDSVRPIQLKFT*MSMLLNSSQFI
Trigger: TATGAACTGACTTGAGTTCAACAACATGGACATTCAGGTGAACTTAAGCTGGATGGGCCTAACAGAATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS GCA 72 bp ATCCTACCTTTACAATTTAGGCAACTTTTCGACAACTaGTCTTACTATAAGGTTGAACGTGCCTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: ILPLQFRQLFDN*SYYKVERASSL
Trigger: AAGAGAGGAGGCACGTTCAACCTTATAGTAAGAGCAGTTGTCGAAAAGTTGCCTAAATTGTAAAGGTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS GCA 72 bp CAGATACATCTTTCTTCCACTATGAAATCTCAAGACTaGCTTTGTATTATAGTACACAGTACCAGATGCAAT +
Preference number: 6 (lower is better)
Translates to: QIHLSSTMKSQD*LCIIVHSTRCN
Trigger: ATTGCATCTGGTACTGTGTACTATAATACAAAGGCAGTCTTGAGATTTCATAGTGGAAGAAAGATGTATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619230.1
CDS CAA 72 bp GGAAGTAAGTATTGTATTAAGAGTTCCATCAAGGTCTaGATTAAGAGGTTAGAAGAGGATATAGGAATGCAC +
Preference number: 6 (lower is better)
Translates to: GSKYCIKSSIKV*IKRLEEDIGMH
Trigger: GTGCATTCCTATATCCTCTTCTAACCTCTTAATCAAGACCTTGATGGAACTCTTAATACAATACTTACTTCC
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619230.1