RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C17ORF97 (Homo sapiens)

Ensembl gene IDs: ENSG00000187624

Ensembl transcript IDs: ENST00000360127.7, ENST00000491373.1, ENST00000571106.1, ENST00000575151.1, ENST00000629953.1, ENST00000638932.1, ENST00000638954.1, ENST00000639297.2, ENST00000639580.1, ENST00000639887.1

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCT +
Preference number: 1 (lower is better)
Translates to: FSRHCGSPGQPRAAW*WESRRRPCTEHLFP
Trigger: AGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR CCA 90 bp ACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTaGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACC +
Preference number: 1 (lower is better)
Translates to: TLLYQFLWGRNLGAS*PDVSGLGSLTEGGT
Trigger: GGTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR GCA 90 bp TTAAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTaGCTCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGG +
Preference number: 1 (lower is better)
Translates to: LNNVIVSVSVGQESG*LLAGCLRLGVSHRG
Trigger: CCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR TCA 90 bp GTGTTTGCAATTGTCCTGGTTTCCTCAGAATCACTTCCCACAGGGTaGCAGGAAGAGGCTCTAGGTGACATGAGGACAGAAGGGCTTACG +
Preference number: 1 (lower is better)
Translates to: VFAIVLVSSESLPTG*QEEALGDMRTEGLT
Trigger: CGTAAGCCCTTCTGTCCTCATGTCACCTAGAGCCTCTTCCTGTCACCCTGTGGGAAGTGATTCTGAGGAAACCAGGACAATTGCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
3UTR-3UTR TCA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTCCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 2 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR-3UTR CCA 90 bp CAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGAAGCAGGGCACTGTGGCTCTCCTaGGCAACCGAGGGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: QKKAPRGSGHRPPANRSRALWLS*ATEGSL
Trigger: CAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGC...CCTGCTTCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
3UTR CAA 90 bp AACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTaGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: NVIVSVSVGQESGCL*AGCLRLGVSHRGRH
Trigger: GTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR-3UTR TCA 90 bp AACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 2 (lower is better)
Translates to: NRGQLGDGRVGVVRVPNIHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...GATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR-3UTR TCA 90 bp TGGGTAACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGACTGAGAATCGTGACTaGTGGAAGAGGCCGACTGTA +
Preference number: 2 (lower is better)
Translates to: WVTQFLTTMLGFGLSSPQTENRD*WKRPTV
Trigger: TACAGTCGGCCTCTTCCATCAGTCACGATTCTCAGT...CTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR-3UTR TCA 90 bp CGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGACTGAGAATCGTGACTaGTGGAAGAGGCCGACTGTA +
Preference number: 2 (lower is better)
Translates to: RSFLRQCWVSGFPALRLRTENRD*WKRPTV
Trigger: TACAGTCGGCCTCTTCCATCAGTCACGATTCTCAGT...CCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR-3UTR CCA 90 bp TTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAATTGTATCAGTTTCTGTaGGGCAGGAATCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: LRQCWVSGFPALRLRARQLYQFL*GRNLGA
Trigger: GGCACCCAGATTCCTGCCCCACAGAAACTGATACAA...TTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR-3UTR GCA 90 bp TCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATGAGATTCTCTGTTCACTAAATTaGTTATGTTCTCAAGGCACT +
Preference number: 2 (lower is better)
Translates to: SSSGQQKQVPCEEFHHEILCSLN*LCSQGT
Trigger: AGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAG...AATCTCATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
3UTR-3UTR TCA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 2 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
3UTR-3UTR TCA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 2 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR-3UTR TCA 90 bp GAACTCTGTTCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 2 (lower is better)
Translates to: ELCSLNCLCSQGTVALLGHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...GCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
3UTR-3UTR TCA 90 bp GTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 2 (lower is better)
Translates to: VPNICFLQIRVSFPFMMMHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...CATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR-3UTR CAA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 3 (lower is better)
Translates to: WATEGSLVMGESASSVYRATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR TCA 72 bp CACTGTGGCTCTCCTGGGCAACCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGTCCGTGTACCGAACAT +
Preference number: 3 (lower is better)
Translates to: HCGSPGQPRAAW*WESRRRPCTEH
Trigger: ATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
3UTR CCA 72 bp TATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTaGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAG +
Preference number: 3 (lower is better)
Translates to: YQFLWGRNLGAS*PDVSGLGSLTE
Trigger: CTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR GCA 72 bp GTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTaGCTCTTGGCCGGATGTCTCCGGCTTGGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: VIVSVSVGQESG*LLAGCLRLGVS
Trigger: AGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR CCA 72 bp CAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTaGGTGCCTCTTGGCCGGATGTCTCCGGCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: QRYCISFCGAGI*VPLGRMSPAWG
Trigger: ACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
3UTR TCA 72 bp ATCACTTCCCACAGGGTGACAGGAAGAGGCTCTAGGTaGCATGAGGACAGAAGGGCTTACGTTACAGCAGCG +
Preference number: 3 (lower is better)
Translates to: ITSHRVTGRGSR*HEDRRAYVTAA
Trigger: CGCTGCTGTAACGTAAGCCCTTCTGTCCTCATGTCACCTAGAGCCTCTTCCTGTCACCCTGTGGGAAGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR GCA 90 bp GGGTGCCTCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: GCLLAGCLRLGVSHRGRHAPEAR*RLIGDS
Trigger: AGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGC...GTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTGGTCCAGCCGCCCGCTaGGCTGCAACCCAACCCGCC +
Preference number: 4 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICGPAAR*AATQPA
Trigger: GGCGGGTTGGGTTGCAGCCCAGCGGGCGGCTGGACC...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: WATEGSLVMGESASSVYRAPEAR*RLIGDS
Trigger: AGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGC...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp GCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACACCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: ATEGSLVMGESASSVYRTPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...TGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CCA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAGCACTGTGGCTCTCCTaGGCAACCGAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WATEGSLVMGESASSVYRALWLS*ATEGSL
Trigger: CAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGC...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CCA 90 bp GCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACAACTCGGCTTTCGACGTaGGCTGCCTGTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ATEGSLVMGESASSVYRTTRLST*AACGWS
Trigger: GCTCCAGCCACAGGCAGCCCACGTCGAAAGCCGAGT...TGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp GGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCCCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: GSLVMGESASSVYRTSVSPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...GGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp GAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTCCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: EGSLVMGESASSVYRTSVPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...AACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CCA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGAGGTCCAGCCGCCCGCTaGGCTGCAACCCAACCCGCC +
Preference number: 4 (lower is better)
Translates to: LVMGESASSVYRTSVSFRGPAAR*AATQPA
Trigger: GGCGGGTTGGGTTGCAGCCCAGCGGGCGGCTGGACC...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTACTCGGCTTTCGACGTaGGCTGCCTGTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICTRLST*AACGWS
Trigger: GCTCCAGCCACAGGCAGCCCACGTCGAAAGCCGAGT...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp AACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCGCACTGTGGCTCTCCTaGGCAACCGAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NRGQLGDGRVGVVRVPNIALWLS*ATEGSL
Trigger: CAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGC...GATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR GCA 90 bp TCAGGGCATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCGCTTTCGACGTGGGCTaGCTGTGGCTGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGHRPPANRSRYRVRSFTAFDVG*LWLELP
Trigger: TGGCAGCTCCAGCCACAGGCAGCCCACGTCGAAAGC...GGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp TCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACCTCAAGGAGATCCCGTCCCCCTTaGCAGACCCCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SWPDVSGLGSLTEGGTSRRSRPP*QTPWSS
Trigger: AGAAGACCAAGGGGTCTGGCAAGGGGGACGGGATCT...CCTTGAGGTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGGGTCCAGCCGCCCGCTaGGCTGCAACCCAACCCGCC +
Preference number: 4 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGGPAAR*AATQPA
Trigger: GGCGGGTTGGGTTGCAGCCCAGCGGGCGGCTGGACC...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp GCCTCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACCTCACCAAGCACACTCATGTaGCTGGTAGCAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: ASWPDVSGLGSLTEGGTSPSTLM*LVAGLR
Trigger: CCTGAGTCCTGCTACCAGCCACATGAGTGTGCTTGG...TGAGGTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR GCA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTGCCTGTGGCTGGAGCTaGCATCTTTGTCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICACGWS*HLCPRG
Trigger: ACCTCTCGGACAAAGATGGCAGCTCCAGCCACAGGC...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp AGGGCATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATACTCGGCTTTCGACGTaGGCTGCCTGTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RASSSGQQKQVPCEEFHHTRLST*AACGWS
Trigger: GCTCCAGCCACAGGCAGCCCACGTCGAAAGCCGAGT...ATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTGTTCTCAAGGCACTGTaGCTCTCCTGGGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICVLKAL*LSWATE
Trigger: CTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAAC...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGACCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: LVMGESASSVYRTSVSFRPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR GCA 90 bp CATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATGAGAGCTTTCGACGTGGGCTaGCTGTGGCTGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HRPPANRSRYRVRSFTMRAFDVG*LWLELP
Trigger: TGGCAGCTCCAGCCACAGGCAGCCCACGTCGAAAGC...TCTCATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp AACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCGCCTGTGGCTGGAGCTaGCATCGTTTTCTCCGATTC +
Preference number: 4 (lower is better)
Translates to: NRGQLGDGRVGVVRVPNIACGWS*HRFLRF
Trigger: GAATCGGAGAAAACGATGGCAGCTCCAGCCACAGGC...GATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CCA 90 bp AAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCGGTCCAGCCGCCCGCTaGGCTGCAACCCAACCCGCC +
Preference number: 4 (lower is better)
Translates to: KQRYCISFCGAGIWVPLGGPAAR*AATQPA
Trigger: GGCGGGTTGGGTTGCAGCCCAGCGGGCGGCTGGACC...GCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGACTTCAAAACAGAGATTaGGGCACTCGGCTTTCGACG +
Preference number: 4 (lower is better)
Translates to: WATEGSLVMGESASSVYRLQNRD*GTRLST
Trigger: CGTCGAAAGCCGAGTGCCCCAATCTCTGTTTTGAAG...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAGGACTTAAGATGTCATaGAAGGAGGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: WATEGSLVMGESASSVYRGLKMS*KEEESG
Trigger: GCCGCTTTCTTCCTCCTTTCATGACATCTTAAGTCC...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp GGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCGGAAGAGGCTCTAGGTaGCATGAGGACAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSLVMGESASSVYRTSVSGRGSR*HEDRRA
Trigger: AGCCCTTCTGTCCTCATGTCACCTAGAGCCTCTTCC...GGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR TCA 90 bp GAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTGGAAGAGGCTCTAGGTaGCATGAGGACAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGSLVMGESASSVYRTSVGRGSR*HEDRRA
Trigger: AGCCCTTCTGTCCTCATGTCACCTAGAGCCTCTTCC...AACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR GCA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGATCGGGCCACGCTCTTTaGAAGGACTTAAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: WATEGSLVMGESASSVYRSGHAL*KDLRCH
Trigger: ATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGA...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp CAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGAAGCAGGGCCTGTGGCTGGAGCTaGCATCTTTGTCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QKKAPRGSGHRPPANRSRACGWS*HLCPRG
Trigger: ACCTCTCGGACAAAGATGGCAGCTCCAGCCACAGGC...CCTGCTTCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp GGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCGCTCTGTCTGTGCTCTaGTTTCGGGCCACGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GSLVMGESASSVYRTSVSALSVL*FRATLF
Trigger: AAAGAGCGTGGCCCGAAACCAGAGCACAGACAGAGC...GGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp GAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTGCTCTGTCTGTGCTCTaGTTTCGGGCCACGCTCTTT +
Preference number: 4 (lower is better)
Translates to: EGSLVMGESASSVYRTSVALSVL*FRATLF
Trigger: AAAGAGCGTGGCCCGAAACCAGAGCACAGACAGAGC...AACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
3UTR CAA 72 bp GTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTaGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: VSVSVGQESGCL*AGCLRLGVSHR
Trigger: TCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR TCA 90 bp GCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACAGGACTTAAGATGTCATaGAAGGAGGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: ATEGSLVMGESASSVYRTGLKMS*KEEESG
Trigger: GCCGCTTTCTTCCTCCTTTCATGACATCTTAAGTCC...TGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp TTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAAGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: LRQCWVSGFPALRLRARQAPEAR*RLIGDS
Trigger: AGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGC...TTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp TTAAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGGTCCAGCCGCCCGCTaGGCTGCAACCCAACCCGCC +
Preference number: 4 (lower is better)
Translates to: LNNVIVSVSVGQESGCLLGPAAR*AATQPA
Trigger: GGCGGGTTGGGTTGCAGCCCAGCGGGCGGCTGGACC...CAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp ACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATTCTTCACCTTCCGTTTaGCCAGCTCGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TLLYQFLWGRNLGASWPDSSPSV*PARRRR
Trigger: GCGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGA...ATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp CCCAGGGATGGAGTTCTGGAACCCACTTATTTGAGGCCATATAAAGGCAGGCCAGCACTGTGGCTCTCCTaGGCAACCGAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRDGVLEPTYLRPYKGRPALWLS*ATEGSL
Trigger: CAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGC...TGGCCTGCCTTTATATGGCCTCAAATAAGTGGGTTCCAGAACTCCATCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp CACTCCAGCAGAGTAGGAGCTAAGTCAGAGTGTAGAAGCTTTGGGGTAAGGTTTCCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: HSSRVGAKSECRSFGVRFPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...AAACCTTACCCCAAAGCTTCTACACTCTGACTTAGCTCCTACTCTGCTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR TCA 90 bp ACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTTGGAACCCACTTATTTaGGGCCATATAAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TEGSLVMGESASSVYRTSWNPLI*GHIKAG
Trigger: GCCTGCCTTTATATGGCCTCAAATAAGTGGGTTCCA...AGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp CAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGAAGCAGGGTTTATCGTCCCCCTTaGCAGACCCCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QKKAPRGSGHRPPANRSRVYRPP*QTPWSS
Trigger: AGAAGACCAAGGGGTCTGGCAAGGGGGACGATAAAC...CCTGCTTCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTGCTTTCGACGTGGGCTaGCTGTGGCTGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLAFDVG*LWLELP
Trigger: TGGCAGCTCCAGCCACAGGCAGCCCACGTCGAAAGC...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTCTTCACCTTCCGTTTaGCCAGCTCGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLSSPSV*PARRRR
Trigger: GCGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGA...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp TTAAAACAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGAGGGCCTCCTCGGCATTaGGGTCAGTGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LKQKKAPRGSGHRPPANRGPPRH*GQCGSP
Trigger: AGGGCTTCCACACTGACCCCAATGCCGAGGAGGCCC...TCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTGTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp TTAAAACAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGAGCACTGTGGCTCTCCTaGGCAACCGAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKQKKAPRGSGHRPPANRALWLS*ATEGSL
Trigger: CAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGC...TCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTGTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp TCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATGTCTCCGGCTTGGTCCACCATGCTGTTaGGCGGAGACATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: SVSVGQESGCLLAGCLRLGPPCC*AETSFL
Trigger: AAGAAATGATGTCTCCGCCCAACAGCATGGTGGACC...AAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR TCA 90 bp GGACTTCCCATGGTAACTTCCCAGGGATGGAGTTCTGGAACCCACTTATTTGAGCAAAGTCGGGGAGGCTaGCGGTGGAGGAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLPMVTSQGWSSGTHLFEQSRGG*RWRSQK
Trigger: CTTCTGACTCCTCCACCGTCAGCCTCCCCGACTTTG...CTCAAATAAGTGGGTTCCAGAACTCCATCCCTGGGAAGTTACCATGGGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp TCAGGGCATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCAACGCAGACTTTCGTTaGTCCGATTCGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SGHRPPANRSRYRVRSFTNADFR*SDSQGS
Trigger: AGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTT...GGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATGCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp GAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTAACGCAGACTTTCGTTaGTCCGATTCGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EGSLVMGESASSVYRTSVNADFR*SDSQGS
Trigger: AGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTT...AACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp GAGGACCATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACCGGGGTGGAAGCCCTTaGGGGCCAAGCACCGGTACC +
Preference number: 4 (lower is better)
Translates to: EDHVYERSSIPLGTSHGNRGGSP*GPSTGT
Trigger: GGTACCGGTGCTTGGCCCTCAAGGGCTTCCACCCCG...GTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACATGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp CGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATCGGGGTGGAAGCCCTTaGGGGCCAAGCACCGGTACC +
Preference number: 4 (lower is better)
Translates to: RPCTEHLFPSDTGLISFYRGGSP*GPSTGT
Trigger: GGTACCGGTGCTTGGCCCTCAAGGGCTTCCACCCCG...ATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp ACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATAGATCCCGTCCCCCTTaGCAGACCCCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLYQFLWGRNLGASWPDRSRPP*QTPWSS
Trigger: AGAAGACCAAGGGGTCTGGCAAGGGGGACGGGATCT...ATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp ACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGTCTTCACCTTCCGTTTaGCCAGCTCGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TQFLTTMLGFGLSSPQIKSSPSV*PARRRR
Trigger: GCGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGA...CTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp CACTCCAGCAGAGTAGGAGCTAAGTCAGAGTGTAGAAGCTTTGGGGTAAGGTTTTCTTCACCTTCCGTTTaGCCAGCTCGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HSSRVGAKSECRSFGVRFSSPSV*PARRRR
Trigger: GCGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGA...AAACCTTACCCCAAAGCTTCTACACTCTGACTTAGCTCCTACTCTGCTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CCA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGGTTCTCAAGGCACTGTaGCTCTCCTGGGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGVLKAL*LSWATE
Trigger: CTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAAC...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
CDS-3UTR CCA 90 bp AGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTGTTCTCAAGGCACTGTaGCTCTCCTGGGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: SRRRPCTEHLFPSDTGLIVLKAL*LSWATE
Trigger: CTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAAC...AATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CCA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTGTTCTCAAGGCACTGTaGCTCTCCTGGGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPVLKAL*LSWATE
Trigger: CTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAAC...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp TCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTACCGAGGGCAGCTTGGTaGTGGGAGAGTCGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: SSVYRTSVSFRYGSHFLLPRAAW*WESRRR
Trigger: ACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGG...TAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR GCA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGAGTTTATCGTCCCCCTTaGCAGACCCCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVMGESASSVYRTSVSFRVYRPP*QTPWSS
Trigger: AGAAGACCAAGGGGTCTGGCAAGGGGGACGATAAAC...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp AGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTGCCTGTGGCTGGAGCTaGCATCGTTTTCTCCGATTC +
Preference number: 4 (lower is better)
Translates to: SRRRPCTEHLFPSDTGLIACGWS*HRFLRF
Trigger: GAATCGGAGAAAACGATGGCAGCTCCAGCCACAGGC...AATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR GCA 90 bp GTGTCTTGGGTAACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCAGCCCACACAACACTaGAGCTGGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSWVTQFLTTMLGFGLSSQPTQH*SWLSPE
Trigger: CTCTGGGGAAAGCCAGCTGCAGTGTTGTGTGGGCTG...GCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGTTACCCAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp GGACTTCCCATGGTAACTTCCCAGGGATGGAGTTCTGGAACCCACTTATTTGAGGTTCTCAAGGCACTGTaGCTCTCCTGGGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: GLPMVTSQGWSSGTHLFEVLKAL*LSWATE
Trigger: CTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAAC...CTCAAATAAGTGGGTTCCAGAACTCCATCCCTGGGAAGTTACCATGGGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
3UTR CAA 72 bp AGCTCTGAGCCCGGGAACCGAGATCTTCTGTCATCATaGAAGCTAATCTGCCCTTTGCTCTGGAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SSEPGNRDLLSS*KLICPLLWRET
Trigger: TGTCTCCCTCCAGAGCAAAGGGCAGATTAGCTTCAATGATGACAGAAGATCTCGGTTCCCGGGCTCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR TCA 90 bp ATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGGGACTTAAGATGTCATaGAAGGAGGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: MGESASSVYRTSVSFRYGGLKMS*KEEESG
Trigger: GCCGCTTTCTTCCTCCTTTCATGACATCTTAAGTCC...CCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp ATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACTTCCCAGGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: MFMKEAVFLLGLPMVTSQAPEAR*RLIGDS
Trigger: AGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGC...CTGGGAAGTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTGTTTATCGTCCCCCTTaGCAGACCCCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPVYRPP*QTPWSS
Trigger: AGAAGACCAAGGGGTCTGGCAAGGGGGACGATAAAC...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp AATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGCAGAGTAGGAGCGCTTTCGACGTGGGCTaGCTGTGGCTGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NYKFVSVVGRFSLQQSRSAFDVG*LWLELP
Trigger: TGGCAGCTCCAGCCACAGGCAGCCCACGTCGAAAGC...GCTCCTACTCTGCTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CCA 90 bp GAGGACCATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACTCTTCACCTTCCGTTTaGCCAGCTCGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: EDHVYERSSIPLGTSHGNSSPSV*PARRRR
Trigger: GCGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGA...GTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACATGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp CGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATACTCGGCTTTCGACGTaGGCTGCCTGTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RPCTEHLFPSDTGLISFYTRLST*AACGWS
Trigger: GCTCCAGCCACAGGCAGCCCACGTCGAAAGCCGAGT...ATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp AATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGCAGAGTAGGAGCGCACTGTGGCTCTCCTaGGCAACCGAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NYKFVSVVGRFSLQQSRSALWLS*ATEGSL
Trigger: CAAGCTGCCCTCGGTTGCCCAGGAGAGCCACAGTGC...GCTCCTACTCTGCTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CCA 90 bp CGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAACTCACACAACACTGCAGCTaGCTTTCCCCAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: RQCWVSGFPALRLRARQLTQHCS*LSPEQD
Trigger: ATCTTGCTCTGGGGAAAGCCAGCTGCAGTGTTGTGT...GAGTTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp CGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGCCAAGCACACTCATGTaGCTGGTAGCAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: RSFLRQCWVSGFPALRLRPSTLM*LVAGLR
Trigger: CCTGAGTCCTGCTACCAGCCACATGAGTGTGCTTGG...CCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp CGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAACTCTTGTATCAGTTTCTGTaGGGCAGGAATCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RQCWVSGFPALRLRARQLLYQFL*GRNLGA
Trigger: GGCACCCAGATTCCTGCCCCACAGAAACTGATACAA...GAGTTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR TCA 90 bp GAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTGGAATTATAAGTTTGTaGGCGTCGTGGGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: EGSLVMGESASSVYRTSVGIISL*ASWVDF
Trigger: AAAATCTACCCACGACGCTCACAAACTTATAATTCC...AACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR GCA 90 bp ACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGGTGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCT +
Preference number: 4 (lower is better)
Translates to: TEHLFPSDTGLISFYDDGAPEAR*RLIGDS
Trigger: AGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGC...ACCATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATCGGGCCACGCTCTTTaGAAGGACTTAAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: LVMGESASSVYRTSVSFRSGHAL*KDLRCH
Trigger: ATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGA...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTGATTCAGTTTATAGATaGGAATCCTTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICDSVYR*ESFPSL
Trigger: CAGAGAAGGAAAGGATTCGCATCTATAAACTGAATC...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp ACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTCTCTGTTCACTAAATTaGTTATGTTCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: TEGSLVMGESASSVYRTSLCSLN*LCSQGT
Trigger: AGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAG...AGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
CDS-3UTR GCA 90 bp ATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGAGTAGCCAGAGTGTTTaGAATTGTCCTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MGESASSVYRTSVSFRYGSSQSV*NCPGFL
Trigger: GAGGAAACCAGGACAATTGCAAACACTCTGGCTACT...CCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR GCA 90 bp GATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGAGTAGCCAGAGTGTTTaGAATTGTCCTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DGRVGVVRVPNICFLQIRSSQSV*NCPGFL
Trigger: GAGGAAACCAGGACAATTGCAAACACTCTGGCTACT...CCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR CCA 90 bp ACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGCACTTCAAAACAGAGATTaGGGCACTCGGCTTTCGACG +
Preference number: 4 (lower is better)
Translates to: TKLLMFSRHCGSPGQPRALQNRD*GTRLST
Trigger: CGTCGAAAGCCGAGTGCCCCAATCTCTGTTTTGAAG...TGCCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp ACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAACTGGTCCACCATGCTGTTaGGCGGAGACATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: TTMLGFGLSSPQIKGETTGPPCC*AETSFL
Trigger: AAGAAATGATGTCTCCGCCCAACAGCATGGTGGACC...AGTTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR TCA 90 bp GGTGTCTTGGGTAACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGACTGAGAATCGTGACTaGTGGAAGAGGCCGACTGTA +
Preference number: 4 (lower is better)
Translates to: GVLGNAVSYDNVGFRAFQTENRD*WKRPTV
Trigger: TACAGTCGGCCTCTTCCATCAGTCACGATTCTCAGT...CTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGTTACCCAAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR GCA 90 bp TCAGGGCATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCGATTCAGTTTATAGATaGGAATCCTTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGHRPPANRSRYRVRSFTDSVYR*ESFPSL
Trigger: CAGAGAAGGAAAGGATTCGCATCTATAAACTGAATC...GGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp TTAAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGCAGCCCACACAACACTaGAGCTGGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LNNVIVSVSVGQESGCLLQPTQH*SWLSPE
Trigger: CTCTGGGGAAAGCCAGCTGCAGTGTTGTGTGGGCTG...CAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp GTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGTCTTCACCTTCCGTTTaGCCAGCTCGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPNICFLQIRVSFPFMMMSSPSV*PARRRR
Trigger: GCGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGA...CATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp ACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGGTGGGCCTCCTCGGCATTaGGGTCAGTGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TEHLFPSDTGLISFYDDGGPPRH*GQCGSP
Trigger: AGGGCTTCCACACTGACCCCAATGCCGAGGAGGCCC...ACCATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp TTAAAACAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGACTTCAAAACAGAGATTaGGGCACTCGGCTTTCGACG +
Preference number: 4 (lower is better)
Translates to: LKQKKAPRGSGHRPPANRLQNRD*GTRLST
Trigger: CGTCGAAAGCCGAGTGCCCCAATCTCTGTTTTGAAG...TCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTGTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTCTTCAAAACAGAGATTaGGGCACTCGGCTTTCGACG +
Preference number: 4 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLLQNRD*GTRLST
Trigger: CGTCGAAAGCCGAGTGCCCCAATCTCTGTTTTGAAG...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTGTAACTTCCCAGGGATaGAGTTCTGGAACCCACTTA +
Preference number: 4 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPVTSQG*SSGTHL
Trigger: TAAGTGGGTTCCAGAACTCCATCCCTGGGAAGTTAC...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp TTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAAACACAACACTGCAGCTaGCTTTCCCCAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LRQCWVSGFPALRLRARQTQHCS*LSPEQD
Trigger: ATCTTGCTCTGGGGAAAGCCAGCTGCAGTGTTGTGT...TTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp CGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGTTGTATCAGTTTCTGTaGGGCAGGAATCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RSFLRQCWVSGFPALRLRLYQFL*GRNLGA
Trigger: GGCACCCAGATTCCTGCCCCACAGAAACTGATACAA...CCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CCA 90 bp GTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATGTTTCTTACGACAATGTTaGGTTTCGGGCTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VIVSVSVGQESGCLLAGCFLRQC*VSGFPA
Trigger: GGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAA...ACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR TCA 90 bp TTAAAACAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGAAACGCAGACTTTCGTTaGTCCGATTCGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LKQKKAPRGSGHRPPANRNADFR*SDSQGS
Trigger: AGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTT...TCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTGTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp AGGGCATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 4 (lower is better)
Translates to: RASSSGQQKQVPCEEFHHHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...ATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp GGACTTCCCATGGTAACTTCCCAGGGATGGAGTTCTGGAACCCACTTATTTGAGTGGAACCCACTTATTTaGGGCCATATAAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLPMVTSQGWSSGTHLFEWNPLI*GHIKAG
Trigger: GCCTGCCTTTATATGGCCTCAAATAAGTGGGTTCCA...CTCAAATAAGTGGGTTCCAGAACTCCATCCCTGGGAAGTTACCATGGGAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp GTGGTGAGGAGGAATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGGTTTATCGTCCCCCTTaGCAGACCCCTTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVRRNYKFVSVVGRFSLQVYRPP*QTPWSS
Trigger: AGAAGACCAAGGGGTCTGGCAAGGGGGACGATAAAC...CTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATTCCTCCTCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR GCA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTCGGGCCACGCTCTTTaGAAGGACTTAAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLSGHAL*KDLRCH
Trigger: ATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGA...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR GCA 90 bp AGGGCATCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATGATTCAGTTTATAGATaGGAATCCTTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RASSSGQQKQVPCEEFHHDSVYR*ESFPSL
Trigger: CAGAGAAGGAAAGGATTCGCATCTATAAACTGAATC...ATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGATGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp TCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTAGCTCTGTCTGTGCTCTaGTTTCGGGCCACGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SSVYRTSVSFRYGSHFLLALSVL*FRATLF
Trigger: AAAGAGCGTGGCCCGAAACCAGAGCACAGACAGAGC...TAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CCA 90 bp AGGAGGAATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGCAGAGTGCTCTGTCTGTGCTCTaGTTTCGGGCCACGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RRNYKFVSVVGRFSLQQSALSVL*FRATLF
Trigger: AAAGAGCGTGGCCCGAAACCAGAGCACAGACAGAGC...ACTCTGCTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CCA 90 bp GGACTTCCCATGGTAACTTCCCAGGGATGGAGTTCTGGAACCCACTTATTTGAGGTAACTTCCCAGGGATaGAGTTCTGGAACCCACTTA +
Preference number: 4 (lower is better)
Translates to: GLPMVTSQGWSSGTHLFEVTSQG*SSGTHL
Trigger: TAAGTGGGTTCCAGAACTCCATCCCTGGGAAGTTAC...CTCAAATAAGTGGGTTCCAGAACTCCATCCCTGGGAAGTTACCATGGGAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CCA 90 bp TTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAATTCTTACGACAATGTTaGGTTTCGGGCTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRQCWVSGFPALRLRARQFLRQC*VSGFPA
Trigger: GGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAA...TTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR TCA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGAGGAATTATAAGTTTGTaGGCGTCGTGGGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: LVMGESASSVYRTSVSFRGIISL*ASWVDF
Trigger: AAAATCTACCCACGACGCTCACAAACTTATAATTCC...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp TCGTCCTCCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATGAGATTGGAATTATAAGTTTGTaGGCGTCGTGGGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: SSSGQQKQVPCEEFHHEIGIISL*ASWVDF
Trigger: AAAATCTACCCACGACGCTCACAAACTTATAATTCC...AATCTCATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGGAGGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp GATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGCTCTGTTCACTAAATTaGTTATGTTCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: DGRVGVVRVPNICFLQIRLCSLN*LCSQGT
Trigger: AGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAG...CCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
CDS-3UTR CCA 90 bp ACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGGTGTTCTCAAGGCACTGTaGCTCTCCTGGGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: TEHLFPSDTGLISFYDDGVLKAL*LSWATE
Trigger: CTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAAC...ACCATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp GTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTAACGCAGACTTTCGTTaGTCCGATTCGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VVRVPNICFLQIRVSFPFNADFR*SDSQGS
Trigger: AGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTT...AAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGGGAATTATAAGTTTGTaGGCGTCGTGGGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGGIISL*ASWVDF
Trigger: AAAATCTACCCACGACGCTCACAAACTTATAATTCC...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
CDS-3UTR GCA 90 bp GTGGTGAGGAGGAATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGTCGGGCCACGCTCTTTaGAAGGACTTAAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: VVRRNYKFVSVVGRFSLQSGHAL*KDLRCH
Trigger: ATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGA...CTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATTCCTCCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR GCA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGACTCTGTTCACTAAATTaGTTATGTTCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LVMGESASSVYRTSVSFRLCSLN*LCSQGT
Trigger: AGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAG...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
3UTR CAA 72 bp GAGAGGACCATGTTTATGAAAGAAGCAGTATTCCTCTaGGGACTTCCCATGGTAACTTCCCAGGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: ERTMFMKEAVFL*GLPMVTSQGWS
Trigger: ACTCCATCCCTGGGAAGTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACATGGTCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp CGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGGACTTAAGATGTCATaGAAGGAGGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RPCTEHLFPSDTGLISFYGLKMS*KEEESG
Trigger: GCCGCTTTCTTCCTCCTTTCATGACATCTTAAGTCC...ATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 4 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp TTAAAACAGAAAAAGGCTCCAAGAGGTTCAGGGCATCGTCCTCCGGCCAACAGACACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKQKKAPRGSGHRPPANRHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...TCTGTTGGCCGGAGGACGATGCCCTGAACCTCTTGGAGCCTTTTTCTGTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR TCA 90 bp GTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTCACATAAACTTGTGGTaGGGAGGAATTATAAGTTTG +
Preference number: 4 (lower is better)
Translates to: VVRVPNICFLQIRVSFPFHINLW*GGIISL
Trigger: CAAACTTATAATTCCTCCTCACCACAAGTTTATGTG...AAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR TCA 90 bp GAGGACCATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACAGAGGACCATGTTTATaGAAGAAGCAGTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: EDHVYERSSIPLGTSHGNRGPCL*KKQYSS
Trigger: AGAGGAATACTGCTTCTTTCATAAACATGGTCCTCT...GTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACATGGTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp GTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTCTCTGTTCACTAAATTaGTTATGTTCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: VVRVPNICFLQIRVSFPFLCSLN*LCSQGT
Trigger: AGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAG...AAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
CDS-3UTR TCA 90 bp ATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACTTCCCAGGGAATTATAAGTTTGTaGGCGTCGTGGGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: MFMKEAVFLLGLPMVTSQGIISL*ASWVDF
Trigger: AAAATCTACCCACGACGCTCACAAACTTATAATTCC...CTGGGAAGTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR GCA 90 bp CGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATTCAGTTTATAGATaGGAATCCTTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RPCTEHLFPSDTGLISFYDSVYR*ESFPSL
Trigger: CAGAGAAGGAAAGGATTCGCATCTATAAACTGAATC...ATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR TCA 90 bp ACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGGTGGAATTATAAGTTTGTaGGCGTCGTGGGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: TEHLFPSDTGLISFYDDGGIISL*ASWVDF
Trigger: AAAATCTACCCACGACGCTCACAAACTTATAATTCC...ACCATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS GCA 90 bp CGCTGGGCTGCAACCCAACCCGCCCCGGGGGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCTCAGCGCGGACCGCCAGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RWAATQPAPGAPEAR*RLIGDSQRGPPGQG
Trigger: GCCCTGGCCTGGCGGTCCGCGCTGAGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGCCCCCGGGGCGGGTTGGGTTGCAGCCCAGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000571106.1
ENST00000638954.1
ENST00000639297.2
CDS-3UTR CAA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAGGGGCCTCCTCGGCATaGGGGTCAGTGTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: WATEGSLVMGESASSVYRGASSA*GSVWKP
Trigger: GGGCTTCCACACTGACCCCAATGCCGAGGAGGCCCC...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp GCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACAGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ATEGSLVMGESASSVYRTATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...TGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CAA 90 bp TCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACCTCAAGGTTCTTCACCTTCCGTTaGGCCAGCTCGGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: SWPDVSGLGSLTEGGTSRFFTFR*ASSEAP
Trigger: CGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGAA...CCTTGAGGTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp ACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTTCGCCGTCGTTGTCCTaGTACCCCATTGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: TEGSLVMGESASSVYRTSSPSLS*YPIVPA
Trigger: GGCGGGGACAATGGGGTACAAGGACAACGACGGCGA...AGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp TGGGCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGATCCTCCTCGCCGTCGTaGTCCTTGTACCCCATTGTC +
Preference number: 5 (lower is better)
Translates to: WATEGSLVMGESASSVYRSSSPS*SLYPIV
Trigger: GACAATGGGGTACAAGGACAACGACGGCGAGGAGGA...TCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GCCTCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACCTCAAGGTCCACCATGCTGTaGGGCGGAGACATCATTTCT +
Preference number: 5 (lower is better)
Translates to: ASWPDVSGLGSLTEGGTSRSTML*GGDIIS
Trigger: AGAAATGATGTCTCCGCCCAACAGCATGGTGGACCT...TGAGGTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS GCA 90 bp ATTTCTTTCCGGAGGGCACCTTTCCTCAGGCAGCCCACACAACACTaGAGCTGGCTTTCCCCAGAGCAAGATCCCGTCCCCCTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: ISFRRAPFLRQPTQH*SWLSPEQDPVPLAR
Trigger: TCTGGCAAGGGGGACGGGATCTTGCTCTGGGGAAAGCCAGCTGCAGTGTTGTGTGGGCTGCCTGAGGAAAGGTGCCCTCCGGAAAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTCCTCCTCGCCGTCGTaGTCCTTGTACCCCATTGTC +
Preference number: 5 (lower is better)
Translates to: GSLVMGESASSVYRTSVSSSSPS*SLYPIV
Trigger: GACAATGGGGTACAAGGACAACGACGGCGAGGAGGA...GGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGGGGGCCTCCTCGGCATaGGGGTCAGTGTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGGASSA*GSVWKP
Trigger: GGGCTTCCACACTGACCCCAATGCCGAGGAGGCCCC...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp GGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATAGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GDGRVGVVRVPNICFLQIATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...TATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS TCA 90 bp GCTAGCCTGGGTGTGACATCCCAGCGTCTCCTCTTACTCCTGGTGTaGCCCTGGGCAAGTCACTTTCCCAGTCTGTGCCCATTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: ASLGVTSQRLLLLLV*PWASHFPSLCPFPW
Trigger: CCAAGGAAATGGGCACAGACTGGGAAAGTGACTTGCCCAGGGTCACACCAGGAGTAAGAGGAGACGCTGGGATGTCACACCCAGGCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629953.1
ENST00000638932.1
CDS-3UTR CAA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATTCTTCACCTTCCGTTaGGCCAGCTCGGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: LVMGESASSVYRTSVSFRFFTFR*ASSEAP
Trigger: CGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGAA...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp TCTTGGCCGGATGTCTCCGGCTTGGGGTCTCTCACAGAGGGAGGCACCTCAAGGCCCTTGCCAGACCCCTaGGTCTTCTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: SWPDVSGLGSLTEGGTSRPLPDP*VFFFLF
Trigger: AAAAAGGAAGAAGAAGACCAAGGGGTCTGGCAAGGG...CCTTGAGGTGCCTCCCTCTGTGAGAGACCCCAAGCCGGAGACATCCGGCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGTCGGGGTGGAAGCCCTaGAGGGCCAAGCACCGGTAC +
Preference number: 5 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGSGWKP*RAKHRY
Trigger: GTACCGGTGCTTGGCCCTCAAGGGCTTCCACCCCGA...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTCGGGGTGGAAGCCCTaGAGGGCCAAGCACCGGTAC +
Preference number: 5 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPSGWKP*RAKHRY
Trigger: GTACCGGTGCTTGGCCCTCAAGGGCTTCCACCCCGA...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp TCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGTCGCCGTCGTTGTCCTaGTACCCCATTGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: SLNCLCSQGTVALLGNRGSPSLS*YPIVPA
Trigger: GGCGGGGACAATGGGGTACAAGGACAACGACGGCGA...CCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp ACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGCATTCTTCACCTTCCGTTaGGCCAGCTCGGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: TKLLMFSRHCGSPGQPRAFFTFR*ASSEAP
Trigger: CGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGAA...TGCCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTCTTCACCTTCCGTTaGGCCAGCTCGGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPFFTFR*ASSEAP
Trigger: CGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGAA...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GCAACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATGCTTCTTTTCCACTTaGCTCTGTCTGTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ATEGSLVMGESASSVYRTCFFST*LCLCSG
Trigger: ACCAGAGCACAGACAGAGCAAAGTGGAAAAGAAGCA...TGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTAAGCTAATCTGCCCTTaGCTCTGGAGGGAGACACGA +
Preference number: 5 (lower is better)
Translates to: EGSLVMGESASSVYRTSVKLICP*LWRETR
Trigger: TCGTGTCTCCCTCCAGAGCAAAGGGCAGATTAGCTT...AACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR CAA 90 bp TCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATGTCTCCGGCTTAGGTCCACCATGCTGTaGGGCGGAGACATCATTTCT +
Preference number: 5 (lower is better)
Translates to: SVSVGQESGCLLAGCLRLRSTML*GGDIIS
Trigger: AGAAATGATGTCTCCGCCCAACAGCATGGTGGACCT...AAGCCGGAGACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GGTAACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTCGCCGTCGTTGTCCTaGTACCCCATTGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: GNAVSYDNVGFRAFQPSDSPSLS*YPIVPA
Trigger: GGCGGGGACAATGGGGTACAAGGACAACGACGGCGA...ATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GGTAACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTTCTTCACCTTCCGTTaGGCCAGCTCGGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GNAVSYDNVGFRAFQPSDFFTFR*ASSEAP
Trigger: CGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGAA...ATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCCCCTTGCCAGACCCCTaGGTCTTCTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: GSLVMGESASSVYRTSVSPLPDP*VFFFLF
Trigger: AAAAAGGAAGAAGAAGACCAAGGGGTCTGGCAAGGG...GGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp CGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTGCTTCTTTTCCACTTaGCTCTGTCTGTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: RGQLGDGRVGVVRVPNICCFFST*LCLCSG
Trigger: ACCAGAGCACAGACAGAGCAAAGTGGAAAAGAAGCA...ACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GAACTCTGTTCACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ELCSLNCLCSQGTVALLGATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...GCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGTGAACAGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000575151.1
ENST00000639297.2
ENST00000639887.1
CDS-3UTR CAA 90 bp ACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGAAGCAGTATTCCTCTaGGGACTTCCCATGGTAACT +
Preference number: 5 (lower is better)
Translates to: TEGSLVMGESASSVYRTSEAVFL*GLPMVT
Trigger: AGTTACCATGGGAAGTCCCAAGAGGAATACTGCTTC...AGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp ACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATAAGATCCCGTCCCCCTaGCCAGACCCCTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TLLYQFLWGRNLGASWPDKIPSP*PDPLVF
Trigger: GAAGACCAAGGGGTCTGGCAAGGGGGACGGGATCTT...ATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS TCA 90 bp CTGCCTCCGGGTCAGCAAGAATTCCATCCCAACGCAGACTTTCGTTaGTCCGATTCGCAAGGTTCTCTATTTCGGCAAAGTCGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LPPGQQEFHPNADFR*SDSQGSLFRQSRGG
Trigger: GCCTCCCCGACTTTGCCGAAATAGAGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTGGGATGGAATTCTTGCTGACCCGGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATGTTCCTCCTCGCCGTCGTaGTCCTTGTACCCCATTGTC +
Preference number: 5 (lower is better)
Translates to: VIVSVSVGQESGCLLAGCSSSPS*SLYPIV
Trigger: GACAATGGGGTACAAGGACAACGACGGCGAGGAGGA...ACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GTGGTGAGGAGGAATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: VVRRNYKFVSVVGRFSLQATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...CTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATTCCTCCTCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CAA 90 bp GTGTCTTGGGTAACGCAGTTTCTTACGACAATGTTGGGTTTCGGGCTTTCCAGCAAGATCCCGTCCCCCTaGCCAGACCCCTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: VSWVTQFLTTMLGFGLSSKIPSP*PDPLVF
Trigger: GAAGACCAAGGGGTCTGGCAAGGGGGACGGGATCTT...GCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAACTGCGTTACCCAAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GCTTTAAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTCGCCGTCGTTGTCCTaGTACCCCATTGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: ALNNVIVSVSVGQESGCLSPSLS*YPIVPA
Trigger: GGCGGGGACAATGGGGTACAAGGACAACGACGGCGA...GAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTCCTCCTCGCCGTCGTaGTCCTTGTACCCCATTGTC +
Preference number: 5 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLSSSPS*SLYPIV
Trigger: GACAATGGGGTACAAGGACAACGACGGCGAGGAGGA...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GTGGTGAGGAGGAATTATAAGTTTGTGAGCGTCGTGGGTAGATTTTCACTCCAGTTCTTCACCTTCCGTTaGGCCAGCTCGGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: VVRRNYKFVSVVGRFSLQFFTFR*ASSEAP
Trigger: CGGCGCCTCCGAGCTGGCCAAACGGAAGGTGAAGAA...CTGGAGTGAAAATCTACCCACGACGCTCACAAACTTATAATTCCTCCTCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CAA 90 bp ATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGCAACGCAGACTTTCGTaGATCCGATTCGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: MGESASSVYRTSVSFRYGQRRLS*IRFARF
Trigger: GAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTG...CCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp CGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RPCTEHLFPSDTGLISFYATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...ATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CAA 90 bp ACCGAGGGCAGCTTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGATCTTCTGTCATCATaGAAGCTAATCTGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: TEGSLVMGESASSVYRTSDLLSS*KLICPL
Trigger: CAAAGGGCAGATTAGCTTCAATGATGACAGAAGATC...AGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAAGCTGCCCTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR CAA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGACCCTTGCCAGACCCCTaGGTCTTCTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LVMGESASSVYRTSVSFRPLPDP*VFFFLF
Trigger: AAAAAGGAAGAAGAAGACCAAGGGGTCTGGCAAGGG...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATTCGGGCCACGCTCTTaGCAAGGACTTAAGATGTCA +
Preference number: 5 (lower is better)
Translates to: LVMGESASSVYRTSVSFRFGPRS*QGLKMS
Trigger: TGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAA...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGTGCTTCTTTTCCACTTaGCTCTGTCTGTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: DGRVGVVRVPNICFLQIRCFFST*LCLCSG
Trigger: ACCAGAGCACAGACAGAGCAAAGTGGAAAAGAAGCA...CCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp ACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGCAAAGCTAATCTGCCCTTaGCTCTGGAGGGAGACACGA +
Preference number: 5 (lower is better)
Translates to: TKLLMFSRHCGSPGQPRAKLICP*LWRETR
Trigger: TCGTGTCTCCCTCCAGAGCAAAGGGCAGATTAGCTT...TGCCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS GCA 90 bp TTTCCACTTTGCTCTGTCTGTGCTCTGGTTTCGGGCCACGCTCTTTaGAAGGACTTAAGATGTCATGAAAGGAGGAAGAAAGCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: FPLCSVCALVSGHAL*KDLRCHERRKKAAG
Trigger: GCCAGCCGCTTTCTTCCTCCTTTCATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAAACCAGAGCACAGACAGAGCAAAGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp AGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTTCGGGCCACGCTCTTaGCAAGGACTTAAGATGTCA +
Preference number: 5 (lower is better)
Translates to: SRRRPCTEHLFPSDTGLIFGPRS*QGLKMS
Trigger: TGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAA...AATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTCGGGCCACGCTCTTaGCAAGGACTTAAGATGTCA +
Preference number: 5 (lower is better)
Translates to: GVVRVPNICFLQIRVSFPFGPRS*QGLKMS
Trigger: TGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAA...AGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp TTGGTGATGGGAGAGTCGGCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATGCTTCTTTTCCACTTaGCTCTGTCTGTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LVMGESASSVYRTSVSFRCFFST*LCLCSG
Trigger: ACCAGAGCACAGACAGAGCAAAGTGGAAAAGAAGCA...TCTGAAGGAAACAGATGTTCGGTACACGGACGACGCCGACTCTCCCATCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp CCGGCCAACAGAAGCAGGTACCGTGTGAGGAGTTTCACCATGAGATTGAGACTTCAACGCAGACTTTCGTaGATCCGATTCGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: PANRSRYRVRSFTMRLRLQRRLS*IRFARF
Trigger: GAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTG...AAGTCTCAATCTCATGGTGAAACTCCTCACACGGTACCTGCTTCTGTTGGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp GTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGGCAACCGAGGGCAGCTaGGTGATGGGAGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: VPNICFLQIRVSFPFMMMATEGS*VMGESA
Trigger: CGCCGACTCTCCCATCACCAAGCTGCCCTCGGTTGC...CATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000575151.1
ENST00000639297.2
ENST00000639580.1
ENST00000639887.1
CDS-3UTR CAA 90 bp ACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGGTTCGCCGTCGTTGTCCTaGTACCCCATTGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: TEHLFPSDTGLISFYDDGSPSLS*YPIVPA
Trigger: GGCGGGGACAATGGGGTACAAGGACAACGACGGCGA...ACCATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp TTAAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGTCCTCCTCGCCGTCGTaGTCCTTGTACCCCATTGTC +
Preference number: 5 (lower is better)
Translates to: LNNVIVSVSVGQESGCLLSSSPS*SLYPIV
Trigger: GACAATGGGGTACAAGGACAACGACGGCGAGGAGGA...CAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GCGTCGTGGGTAGATTTTCACTCCAGCAGAGTAGGAGCTAAGTCAGAGTGTAGACCCTTGCCAGACCCCTaGGTCTTCTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: ASWVDFHSSRVGAKSECRPLPDP*VFFFLF
Trigger: AAAAAGGAAGAAGAAGACCAAGGGGTCTGGCAAGGG...TCTACACTCTGACTTAGCTCCTACTCTGCTGGAGTGAAAATCTACCCACGACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CAA 90 bp GCGTCGTGGGTAGATTTTCACTCCAGCAGAGTAGGAGCTAAGTCAGAGTGTAGACAACGCAGACTTTCGTaGATCCGATTCGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: ASWVDFHSSRVGAKSECRQRRLS*IRFARF
Trigger: GAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTG...TCTACACTCTGACTTAGCTCCTACTCTGCTGGAGTGAAAATCTACCCACGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS-3UTR CAA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTCAACGCAGACTTTCGTaGATCCGATTCGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLQRRLS*IRFARF
Trigger: GAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTG...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCGGATGTTTTCTTACGACAATGTaGGGTTTCGGGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: VIVSVSVGQESGCLLAGCFLTTM*GFGLSS
Trigger: GCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAA...ACATCCGGCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp ATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACTTCCCAGTCCTCCTCGCCGTCGTaGTCCTTGTACCCCATTGTC +
Preference number: 5 (lower is better)
Translates to: MFMKEAVFLLGLPMVTSQSSSPS*SLYPIV
Trigger: GACAATGGGGTACAAGGACAACGACGGCGAGGAGGA...CTGGGAAGTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp AAACAACGTTATTGTATCAGTTTCTGTGGGGCAGGAATCTGGGTGCCTCTTGGCCCCTTGCCAGACCCCTaGGTCTTCTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: KQRYCISFCGAGIWVPLGPLPDP*VFFFLF
Trigger: AAAAAGGAAGAAGAAGACCAAGGGGTCTGGCAAGGG...GCCAAGAGGCACCCAGATTCCTGCCCCACAGAAACTGATACAATAACGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp GCGTCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTGAAGCAGTATTCCTCTaGGGACTTCCCATGGTAACT +
Preference number: 5 (lower is better)
Translates to: ASSVYRTSVSFRYGSHFLEAVFL*GLPMVT
Trigger: AGTTACCATGGGAAGTCCCAAGAGGAATACTGCTTC...AAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp TTACGACAATGTTGGGTTTCGGGCTTTCCAGCCCTCAGATTAAGGGCGAGACAATTTCTTACGACAATGTaGGGTTTCGGGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LRQCWVSGFPALRLRARQFLTTM*GFGLSS
Trigger: GCTGGAAAGCCCGAAACCCAACATTGTCGTAAGAAA...TTGTCTCGCCCTTAATCTGAGGGCTGGAAAGCCCGAAACCCAACATTGTCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS-3UTR CAA 90 bp ACTAAATTGCTTATGTTCTCAAGGCACTGTGGCTCTCCTGGGCAACCGAGGGCAGATCTTCTGTCATCATaGAAGCTAATCTGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: TKLLMFSRHCGSPGQPRADLLSS*KLICPL
Trigger: CAAAGGGCAGATTAGCTTCAATGATGACAGAAGATC...TGCCCTCGGTTGCCCAGGAGAGCCACAGTGCCTTGAGAACATAAGCAATTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575151.1
ENST00000639887.1
CDS-3UTR CAA 90 bp GAGGACCATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACCCCTTGCCAGACCCCTaGGTCTTCTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: EDHVYERSSIPLGTSHGNPLPDP*VFFFLF
Trigger: AAAAAGGAAGAAGAAGACCAAGGGGTCTGGCAAGGG...GTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACATGGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp TCGTCCGTGTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATTCGGGCCACGCTCTTaGCAAGGACTTAAGATGTCA +
Preference number: 5 (lower is better)
Translates to: SSVYRTSVSFRYGSHFLLFGPRS*QGLKMS
Trigger: TGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAA...TAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTACACGGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS-3UTR CAA 90 bp GAGGACCATGTTTATGAAAGAAGCAGTATTCCTCTTGGGACTTCCCATGGTAACCTGGAACCCACTTATTaGAGGCCATATAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: EDHVYERSSIPLGTSHGNLEPTY*RPYKGR
Trigger: CCTGCCTTTATATGGCCTCAAATAAGTGGGTTCCAG...GTTACCATGGGAAGTCCCAAGAGGAATACTGCTTCTTTCATAAACATGGTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS-3UTR CAA 90 bp GTACCGAACATCTGTTTCCTTCAGATACGGGTCTCATTTCCTTTTATGATGATGCTGGAACCCACTTATTaGAGGCCATATAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VPNICFLQIRVSFPFMMMLEPTY*RPYKGR
Trigger: CCTGCCTTTATATGGCCTCAAATAAGTGGGTTCCAG...CATCATCATAAAAGGAAATGAGACCCGTATCTGAAGGAAACAGATGTTCGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS GCA 72 bp GCAACCCAACCCGCCCCGGGGGCGCCCGAGGCCCGATaGCGACTAATCGGCGACTCTCAGCGCGGACCGCCA +
Preference number: 6 (lower is better)
Translates to: ATQPAPGAPEAR*RLIGDSQRGPP
Trigger: TGGCGGTCCGCGCTGAGAGTCGCCGATTAGTCGGCATCGGGCCTCGGGCGCCCCCGGGGCGGGTTGGGTTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000571106.1
ENST00000638954.1
ENST00000639297.2
ENST00000639580.1
CDS GCA 72 bp CGGAGGGCACCTTTCCTCAGGCAGCCCACACAACACTaGAGCTGGCTTTCCCCAGAGCAAGATCCCGTCCCC +
Preference number: 6 (lower is better)
Translates to: RRAPFLRQPTQH*SWLSPEQDPVP
Trigger: GGGGACGGGATCTTGCTCTGGGGAAAGCCAGCTGCAGTGTTGTGTGGGCTGCCTGAGGAAAGGTGCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS CCA 72 bp GCACCTTTCCTCAGGCAGCCCACACAACACTGCAGCTaGCTTTCCCCAGAGCAAGATCCCGTCCCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: APFLRQPTQHCS*LSPEQDPVPLA
Trigger: GGCAAGGGGGACGGGATCTTGCTCTGGGGAAAGCCAGCTGCAGTGTTGTGTGGGCTGCCTGAGGAAAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571106.1
ENST00000638954.1
CDS TCA 72 bp GGTGTGACATCCCAGCGTCTCCTCTTACTCCTGGTGTaGCCCTGGGCAAGTCACTTTCCCAGTCTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: GVTSQRLLLLLV*PWASHFPSLCP
Trigger: TGGGCACAGACTGGGAAAGTGACTTGCCCAGGGTCACACCAGGAGTAAGAGGAGACGCTGGGATGTCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629953.1
ENST00000638932.1
CDS GCA 72 bp ACTCGGCTTTCGACGTGGGCTGCCTGTGGCTGGAGCTaGCATCTTTGTCCGAGAGGTAGGGTAAGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: TRLSTWAACGWS*HLCPRGRVSSQ
Trigger: CTGAGAACTTACCCTACCTCTCGGACAAAGATGGCAGCTCCAGCCACAGGCAGCCCACGTCGAAAGCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS TCA 72 bp TCGCAAGGTTCTCTATTTCGGCAAAGTCGGGGAGGCTaGCGGTGGAGGAGTCAGAAGGGAGGTGCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SQGSLFRQSRGG*RWRSQKGGASF
Trigger: AAAAGAAGCACCTCCCTTCTGACTCCTCCACCGTCAGCCTCCCCGACTTTGCCGAAATAGAGAACCTTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS CAA 90 bp TCTGCCTCCGGGTCAGCAAGAATTCCATCCCAACGCAGACTTTCGTaGATCCGATTCGCAAGGTTCTCTATTTCGGCAAAGTCGGGGAGG +
Preference number: 6 (lower is better)
Translates to: SASGSARIPSQRRLS*IRFARFSISAKSGR
Trigger: CCTCCCCGACTTTGCCGAAATAGAGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTGGGATGGAATTCTTGCTGACCCGGAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS TCA 72 bp TTCGGGCCACGCTCTTTGCAAGGACTTAAGATGTCATaGAAGGAGGAAGAAAGCGGCTGGCTCTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: FGPRSLQGLKMS*KEEESGWLFRL
Trigger: GAGCCTGAAGAGCCAGCCGCTTTCTTCCTCCTTTCATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS CAA 90 bp GGTGTGACCCTGGGCAAGTCACTTTCCCAGTCTGTGCCCATTTCCTaGGATGTGATGGGAACTGTAGCATCTTGCACCTCAAACATTGTC +
Preference number: 6 (lower is better)
Translates to: GVTLGKSLSQSVPIS*DVMGTVASCTSNIV
Trigger: GACAATGTTTGAGGTGCAAGATGCTACAGTTCCCATCACATCCAAGGAAATGGGCACAGACTGGGAAAGTGACTTGCCCAGGGTCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629953.1
ENST00000638932.1
CDS CAA 72 bp CTGGGCAAGTCACTTTCCCAGTCTGTGCCCATTTCCTaGGATGTGATGGGAACTGTAGCATCTTGCACCTCA +
Preference number: 6 (lower is better)
Translates to: LGKSLSQSVPIS*DVMGTVASCTS
Trigger: TGAGGTGCAAGATGCTACAGTTCCCATCACATCCAAGGAAATGGGCACAGACTGGGAAAGTGACTTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629953.1
ENST00000638932.1
CDS GCA 72 bp AGCACCGGTACCGTTTTCTCCGATTCAGTTTATAGATaGGAATCCTTTCCTTCTCTGCCTCCGGGTCAGCAA +
Preference number: 6 (lower is better)
Translates to: STGTVFSDSVYR*ESFPSLPPGQQ
Trigger: TTGCTGACCCGGAGGCAGAGAAGGAAAGGATTCGCATCTATAAACTGAATCGGAGAAAACGGTACCGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360127.7
ENST00000639297.2
CDS GCA 72 bp GGAGCTGCCATCGTTTTCTCCGATTCAGTTTATAGATaGGAATCCTTTCCTTCTCTGCCTCCGGGTCAGCAA +
Preference number: 6 (lower is better)
Translates to: GAAIVFSDSVYR*ESFPSLPPGQQ
Trigger: TTGCTGACCCGGAGGCAGAGAAGGAAAGGATTCGCATCTATAAACTGAATCGGAGAAAACGATGGCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491373.1
ENST00000639580.1
CDS GCA 72 bp TGCTCTGTCTGTGCTCTGGTTTCGGGCCACGCTCTTTaGAAGGACTTAAGATGTCATGAAAGGAGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: CSVCALVSGHAL*KDLRCHERRKK
Trigger: TTTCTTCCTCCTTTCATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCCGAAACCAGAGCACAGACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS CAA 72 bp GGGTCAGCAAGAATTCCATCCCAACGCAGACTTTCGTaGATCCGATTCGCAAGGTTCTCTATTTCGGCAAAG +
Preference number: 6 (lower is better)
Translates to: GSARIPSQRRLS*IRFARFSISAK
Trigger: CTTTGCCGAAATAGAGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTGGGATGGAATTCTTGCTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS TCA 72 bp GGTCAGCAAGAATTCCATCCCAACGCAGACTTTCGTTaGTCCGATTCGCAAGGTTCTCTATTTCGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: GQQEFHPNADFR*SDSQGSLFRQS
Trigger: ACTTTGCCGAAATAGAGAACCTTGCGAATCGGATCAACGAAAGTCTGCGTTGGGATGGAATTCTTGCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360127.7
ENST00000491373.1
ENST00000639297.2
ENST00000639580.1
CDS CAA 72 bp GCCCATTTCCTTGGATGTGATGGGAACTGTAGCATCTaGCACCTCAAACATTGTCGAGGAGCTCCAAATGTA +
Preference number: 6 (lower is better)
Translates to: AHFLGCDGNCSI*HLKHCRGAPNV
Trigger: TACATTTGGAGCTCCTCGACAATGTTTGAGGTGCAAGATGCTACAGTTCCCATCACATCCAAGGAAATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629953.1
ENST00000638932.1
CDS TCA 72 bp GACACGATCTCTATCTTCCAAGGCTATTCATCCTGCTaGGGTCTTAGATACTGCAGTGCAGTAATTAAAAGC +
Preference number: 6 (lower is better)
Translates to: DTISIFQGYSSC*GLRYCSAVIKS
Trigger: GCTTTTAATTACTGCACTGCAGTATCTAAGACCTCAGCAGGATGAATAGCCTTGGAAGATAGAGATCGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000629953.1
ENST00000638932.1