RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C17ORF80 (Homo sapiens)

Ensembl gene IDs: ENSG00000141219

Ensembl transcript IDs: ENST00000255557.8, ENST00000268942.12, ENST00000359042.6, ENST00000426147.6, ENST00000535032.6, ENST00000535032.7, ENST00000577615.5, ENST00000582391.1, ENST00000582793.1, ENST00000585109.5

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTaGTTCTTACCTAGCGGGGCACTCCAATGCCACAGACAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: RFGNSSCCLEARSKR*FLPSGALQCHRQGR
Trigger: TCTGCCCTGTCTGTGGCATTGGAGTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp CGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTaGTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGG +
Preference number: 1 (lower is better)
Translates to: RCICMHLAGRFGNSS*CLEARSKRCFLPSG
Trigger: CCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp TCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGCCTCTTCTaGGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTC +
Preference number: 1 (lower is better)
Translates to: SSQAWTVAWVSPCLF*GMDGKVNMDYVYGF
Trigger: GAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp TCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATaGCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATTACGTG +
Preference number: 1 (lower is better)
Translates to: SNTSSQAWTVAWVSP*LFCGMDGKVNMDYV
Trigger: CACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 90 bp TTTGTATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTGCCTaGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACTCC +
Preference number: 1 (lower is better)
Translates to: FVCTLQEDSGIQAAA*KQDLSVASYLAGHS
Trigger: GGAGTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 90 bp ATGGACAGTAGCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATaGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGCAT +
Preference number: 1 (lower is better)
Translates to: MDSSLGVTMPLLRDG*EGEYGLRVWILTLH
Trigger: ATGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp TGCATTTGTATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTaGCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCA +
Preference number: 1 (lower is better)
Translates to: CICMHLAGRFGNSSC*LEARSKRCFLPSGA
Trigger: TGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 90 bp TCCCAACTTGTAGTAACAGAACCTTCAAATACGTCCTCTCAAGCATaGACAGTAGCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGAT +
Preference number: 1 (lower is better)
Translates to: SQLVVTEPSNTSSQA*TVAWVSPCLFCGMD
Trigger: ATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCTGTTACTACAAGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 90 bp CCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATaGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGG +
Preference number: 1 (lower is better)
Translates to: PLLRDGWEGEYGLRV*ILTLHLYAPCRKIR
Trigger: CCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 90 bp CACAGACCACGTGTGAGTTACAGCCGGGGTATTCAGGCATGTCCGTaGATATTCCCAACTTGTAGTAACAGAACCTTCAAATACGTCCTC +
Preference number: 1 (lower is better)
Translates to: HRPRVSYSRGIQACP*IFPTCSNRTFKYVL
Trigger: GAGGACGTATTTGAAGGTTCTGTTACTACAAGTTGGGAATATTCACGGACATGCCTGAATACCCCGGCTGTAACTCACACGTGGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp TATGGATTACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTaGAGGAAGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGATC +
Preference number: 1 (lower is better)
Translates to: YGLRVWILTLHLYAP*RKIREFKLLPGSKI
Trigger: GATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp ATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTaGATTTGTATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGC +
Preference number: 1 (lower is better)
Translates to: MDGKVNMDYVYGFSR*ICMHLAGRFGNSSC
Trigger: GCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 90 bp GAAAAATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTaGAGCTGTGAAGTGTGCTTCCTCGTCATGCTGAGTTTGTTTAGA +
Preference number: 1 (lower is better)
Translates to: EKCILTRQLYISIAP*SCEVCFLVMLSLFR
Trigger: TCTAAACAAACTCAGCATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 90 bp ACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTGTaGTTCCTCGTCATGCTGAGTTTGTTTAGATCTAAATCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: TRQLYISIAPWSCEV*FLVMLSLFRSKSQK
Trigger: TTTCTGAGATTTAGATCTAAACAAACTCAGCATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 90 bp ATTGGAACTGGCTGTGCAAATGAACTGATAGGAATTTTGCATACATaGGCGAAAAATGTATCCTCACGAGGCAACTTTACATCAGTATTG +
Preference number: 1 (lower is better)
Translates to: IGTGCANELIGILHT*AKNVSSRGNFTSVL
Trigger: CAATACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATCAGTTCATTTGCACAGCCAGTTCCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR TCA 90 bp GCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACTCCGGCTCTGTGAAGAGATaGGTAGTTACCCCGCCTCAC +
Preference number: 2 (lower is better)
Translates to: AAAWKQDLSVASYLAGHSGSVKR*VVTPPH
Trigger: GTGAGGCGGGGTAACTACTCATCTCTTCACAGAGCC...GGAGTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR GCA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATGCAAGATCTAAGCGTTaGTTCTTACCTAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDARSKR*FLPSGA
Trigger: TGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGC...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR TCA 90 bp AGAACCTTCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGTGCACCCTGGAGCTGTaGAGTGTGCTTCCTCGTCAT +
Preference number: 2 (lower is better)
Translates to: RTFKYVLSSMDSSLGVTMCTLEL*SVLPRH
Trigger: ATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCA...CATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR TCA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGTGCACCCTGGAGCTGTaGAGTGTGCTTCCTCGTCAT +
Preference number: 2 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLCTLEL*SVLPRH
Trigger: ATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCA...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR GCA 90 bp GCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACTCCTTTACCCCCTCCTTCTaGAGCATGATTTTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: AAAWKQDLSVASYLAGHSFTPSF*SMILRD
Trigger: GTCTCTTAAAATCATGCTGCAGAAGGAGGGGGTAAA...GGAGTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 90 bp TGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGCATTaGTATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: WEGEYGLRVWILTLH*YAPCRKIREFKLLP
Trigger: AGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 90 bp ATATGGATTACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTaGCAGGAAGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: IWITCMDSHAAFVCT*QEDSGIQAAAWKQD
Trigger: ATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CCA 90 bp CCCGAGGTTAATCCACTTACACAGACCACGTGTGAGTTACAGCCGGGGTATTCATGGAGATGTTTCCAATaGCTTCTTGAAAGTTATCCA +
Preference number: 2 (lower is better)
Translates to: PEVNPLTQTTCELQPGYSWRCFQ*LLESYP
Trigger: TGGATAACTTTCAAGAAGCCATTGGAAACATCTCCA...TGAATACCCCGGCTGTAACTCACACGTGGTCTGTGTAAGTGGATTAACCTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR GCA 90 bp AACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTGTGCTTCCTCGTCATGCACAGGATCTCACCTTTaGCTTAAACTTGGCAATACA +
Preference number: 2 (lower is better)
Translates to: NFTSVLHPGAVKCASSSCTGSHL*LKLGNT
Trigger: TGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTGT...GCATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CCA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGGGAGTCTTGTCTTTCTaGATGAAGCTTTTAATCTGG +
Preference number: 2 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGGVLSF*MKLLIW
Trigger: CCAGATTAAAAGCTTCATCCAGAAAGACAAGACTCC...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CCA 90 bp TTTCAGATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACAGCGTACTGGCTTCTGTaGGTAGCAGTCTTACTTGTC +
Preference number: 2 (lower is better)
Translates to: FQILFRIKQGRPEVNPLTAYWLL*VAVLLV
Trigger: GACAAGTAAGACTGCTACCCACAGAAGCCAGTACGC...TGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR TCA 90 bp CTGGCTTCTGTGGGTAGCAGTCTTACTTGTCTACTATTCGTTCTGAGGAGTCTTGGAATTTTGCATACATaGGCGAAAAATGTATCCTCA +
Preference number: 2 (lower is better)
Translates to: LASVGSSLTCLLFVLRSLGILHT*AKNVSS
Trigger: TGAGGATACATTTTTCGCTCATGTATGCAAAATTCC...AAGACTCCTCAGAACGAATAGTAGACAAGTAAGACTGCTACCCACAGAAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CCA 90 bp TTTCAGATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACAGGAGTCTTGTCTTTCTaGATGAAGCTTTTAATCTGG +
Preference number: 2 (lower is better)
Translates to: FQILFRIKQGRPEVNPLTGVLSF*MKLLIW
Trigger: CCAGATTAAAAGCTTCATCCAGAAAGACAAGACTCC...TGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATATCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 90 bp GATACTACTTTATTTATAGCAGTGATACAAATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGG +
Preference number: 2 (lower is better)
Translates to: DTTLFIAVIQMLLIT*RAEKLSLNATTTLR
Trigger: CCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTATAAATAAAGTAGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000535032.6
ENST00000577615.5
3UTR-3UTR TCA 90 bp GAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGCAAATGAAGCTTCCTCGTCATGCTaGGTTTGTTTAGATCTAAAT +
Preference number: 2 (lower is better)
Translates to: EAFNLVITYMIGTGCANEASSSC*VCLDLN
Trigger: ATTTAGATCTAAACAAACTCAGCATGACGAGGAAGC...TTCATTTGCACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CCA 90 bp AATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACATCAGTAGTCATCCCAGAATGTaGAGATGTTTCCAATGGCTT +
Preference number: 2 (lower is better)
Translates to: NFAYMSEKCILTRQLYISSHPRM*RCFQWL
Trigger: AAGCCATTGGAAACATCTCCACATTCTGGGATGACT...ACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 90 bp AAAGCTGTCTTCTTATTAATACAGGATCTCACCTTTGCCTTAAACTaGGCAATACAAGGCAGATATCCTTTTAGGACTCATGGATCATTA +
Preference number: 2 (lower is better)
Translates to: KAVFLLIQDLTFALN*AIQGRYPFRTHGSL
Trigger: TAATGATCCATGAGTCCTAAAAGGATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTGTATTAATAAGAAGACAGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 72 bp GCATGGACAGTAGCCTGGGTGTCACCATGCCTCTTCTaGGGGATGGATGGGAAGGTGAATATGGATTACGTG +
Preference number: 3 (lower is better)
Translates to: AWTVAWVSPCLF*GMDGKVNMDYV
Trigger: CACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 72 bp TCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATaGCTCTTCTGCGGGATGGATGGGAAGGTGAATATG +
Preference number: 3 (lower is better)
Translates to: SSQAWTVAWVSP*LFCGMDGKVNM
Trigger: CATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 72 bp AATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTaGTTCTTACCTAGCGGGGCACTCCAATGCCACAGA +
Preference number: 3 (lower is better)
Translates to: NSSCCLEARSKR*FLPSGALQCHR
Trigger: TCTGTGGCATTGGAGTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 72 bp AGCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATaGGAAGGTGAATATGGATTACGTGTATGGATTCTC +
Preference number: 3 (lower is better)
Translates to: SLGVTMPLLRDG*EGEYGLRVWIL
Trigger: GAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 72 bp TGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTaGATATGGATTACGTGTATGGATTCTCACGCTGCA +
Preference number: 3 (lower is better)
Translates to: CHHASSAGWMGR*IWITCMDSHAA
Trigger: TGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 72 bp ACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTGCCTaGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCG +
Preference number: 3 (lower is better)
Translates to: TLQEDSGIQAAA*KQDLSVASYLA
Trigger: CGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 72 bp GTAGTAACAGAACCTTCAAATACGTCCTCTCAAGCATaGACAGTAGCCTGGGTGTCACCATGCCTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: VVTEPSNTSSQA*TVAWVSPCLFC
Trigger: GCAGAAGAGGCATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCTGTTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp AGAACCTTCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCC +
Preference number: 3 (lower is better)
Translates to: RTFKYVLSSMDSSLGVTMMLLIT*RAEKLS
Trigger: GGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT...CATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp CCCGAGGTTAATCCACTTACACAGACCACGTGTGAGTTACAGCCGGGGTATTCAGCATTTGTATGCACCTaGCAGGAAGATTCGGGAATT +
Preference number: 3 (lower is better)
Translates to: PEVNPLTQTTCELQPGYSAFVCT*QEDSGI
Trigger: AATTCCCGAATCTTCCTGCAAGGTGCATACAAATGC...TGAATACCCCGGCTGTAACTCACACGTGGTCTGTGTAAGTGGATTAACCTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 72 bp ATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTaGCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCT +
Preference number: 3 (lower is better)
Translates to: MHLAGRFGNSSC*LEARSKRCFLP
Trigger: AGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 72 bp CGGGATGGATGGGAAGGTGAATATGGATTACGTGTATaGATTCTCACGCTGCATTTGTATGCACCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: RDGWEGEYGLRV*ILTLHLYAPCR
Trigger: CCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 72 bp AAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTaGTGTTCCAGAGCTTTAAGTGATGTCCAGGTCAAC +
Preference number: 3 (lower is better)
Translates to: KYVLQSSPLYAL*CSRALSDVQVN
Trigger: GTTGACCTGGACATCACTTAAAGCTCTGGAACAGCAAAGGGCGTACAGTGGAGACGACTGCAATACATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
3UTR GCA 72 bp TGTATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTaGTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: CMHLAGRFGNSS*CLEARSKRCFL
Trigger: TAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp ATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACACAGACCATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCC +
Preference number: 3 (lower is better)
Translates to: ILFRIKQGRPEVNPLTQTMLLIT*RAEKLS
Trigger: GGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT...GGTCTGTGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp AATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGACCTTTGCCTTAAACTaGGCAATACAAGGCAGATAT +
Preference number: 3 (lower is better)
Translates to: NSSCCLEARSKRCFLPSGTFALN*AIQGRY
Trigger: ATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGT...CCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGGTTTCCAATGGCTTCTaGAAAGTTATCCACACTACT +
Preference number: 3 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLVSNGF*KVIHTT
Trigger: AGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAAC...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 72 bp CGTGTGAGTTACAGCCGGGGTATTCAGGCATGTCCGTaGATATTCCCAACTTGTAGTAACAGAACCTTCAAA +
Preference number: 3 (lower is better)
Translates to: RVSYSRGIQACP*IFPTCSNRTFK
Trigger: TTTGAAGGTTCTGTTACTACAAGTTGGGAATATTCACGGACATGCCTGAATACCCCGGCTGTAACTCACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp AACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTGTGCTTCCTCGTCATGCACCTTTGCCTTAAACTaGGCAATACAAGGCAGATAT +
Preference number: 3 (lower is better)
Translates to: NFTSVLHPGAVKCASSSCTFALN*AIQGRY
Trigger: ATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGT...GCATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR GCA 72 bp AAGGTGAATATGGATTACGTGTATGGATTCTCACGCTaGATTTGTATGCACCTTGCAGGAAGATTCGGGAAT +
Preference number: 3 (lower is better)
Translates to: KVNMDYVYGFSR*ICMHLAGRFGN
Trigger: ATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATATTCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 72 bp CTGTGGGTAGCAGTCTTACTTGTCTACTATTCGTTCTaGGGAGTCTTGTCTTTCTGGATGAAGCTTTTAATC +
Preference number: 3 (lower is better)
Translates to: LWVAVLLVYYSF*GVLSFWMKLLI
Trigger: GATTAAAAGCTTCATCCAGAAAGACAAGACTCCTCAGAACGAATAGTAGACAAGTAAGACTGCTACCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 72 bp GGCTGTGCAAATGAACTGATAGGAATTTTGCATACATaGGCGAAAAATGTATCCTCACGAGGCAACTTTACA +
Preference number: 3 (lower is better)
Translates to: GCANELIGILHT*AKNVSSRGNFT
Trigger: TGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATCAGTTCATTTGCACAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR TCA 72 bp GGTGATCACATACATGATTGGAACTGGCTGTGCAAATaGACTGATAGGAATTTTGCATACATGAGCGAAAAA +
Preference number: 3 (lower is better)
Translates to: GDHIHDWNWLCK*TDRNFAYMSEK
Trigger: TTTTTCGCTCATGTATGCAAAATTCCTATCAGTTCATTTGCACAGCCAGTTCCAATCATGTATGTGATCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CCA 72 bp TTTACAAGTCATCCCAGAATGTGGAGATGTTTCCAATaGCTTCTTGAAAGTTATCCACACTACTGTATTGTG +
Preference number: 3 (lower is better)
Translates to: FTSHPRMWRCFQ*LLESYPHYCIV
Trigger: CACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAACATCTCCACATTCTGGGATGACTTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR-3UTR CAA 90 bp TCCAATGGCTTCTTGAAAGTTATCCACACTACTGTATTGTGGATTCTCAGTATCGTCAGTGGAGACTTTTaGTTGTTTCCTACTATATGT +
Preference number: 3 (lower is better)
Translates to: SNGFLKVIHTTVLWILSIVSGDF*LFPTIC
Trigger: ACATATAGTAGGAAACAACAAAAAGTCTCCACTGAC...GATACTGAGAATCCACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACCAGCCTCGGAAGACCTaGAAGCCCAGGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QAAAWKQDLSVASYLAGHQPRKT*KPRRPR
Trigger: CCGGGGCCGCCTGGGCTTTCAGGTCTTCCGAGGCTG...GTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGACAGCCTCGGAAGACCTaGAAGCCCAGGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPLHLGVTGQFSGQHRARQPRKT*KPRRPR
Trigger: CCGGGGCCGCCTGGGCTTTCAGGTCTTCCGAGGCTG...TCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGACCTGATCCAGCCTTGTaGGAGTCTTTCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RCYRAIQWATQGTKALERPDPAL*ESFPLG
Trigger: CCCCAGGGGGAAAGACTCTCACAAGGCTGGATCAGG...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000577615.5
CDS-3UTR GCA 90 bp GTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTAACCACTCCAGCCCCATaGAGCTGCGAAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VGNTGHEGTREKSRRLLLTTPAP*SCEESS
Trigger: GGAAGACTCTTCGCAGCTGCATGGGGCTGGAGTGGT...TAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp CAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACGGCTCTGTGAAGAGATaGGTAGTTACCCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: QAAAWKQDLSVASYLAGHGSVKR*VVTPPH
Trigger: GTGAGGCGGGGTAACTACTCATCTCTTCACAGAGCC...GTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGCGGGGCACTCCAATaGCACAGACAGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: RCYRAIQWATQGTKALERSGALQ*HRQGRT
Trigger: TGTTCTGCCCTGTCTGTGGCATTGGAGTGCCCCGCT...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTGAATCCCTGGTGTTaGAGTTCTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SVGNTGHEGTREKSRRLLLNPWC*SSHSHG
Trigger: GCCATGGCTGTGAGAACTTCAACACCAGGGATTCAG...GAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp GTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTGGCACCCAGTGTGTaGTGCTTGGAACTGACTATC +
Preference number: 4 (lower is better)
Translates to: VGNTGHEGTREKSRRLLLLAPSV*CLELTI
Trigger: GATAGTCAGTTCCAAGCATCACACACTGGGTGCCAG...TAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACCTGGCACCCAGTGTGTaGTGCTTGGAACTGACTATC +
Preference number: 4 (lower is better)
Translates to: WATQGTKALERSHEGFSYLAPSV*CLELTI
Trigger: GATAGTCAGTTCCAAGCATCACACACTGGGTGCCAG...GTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATTGCGAAGAGTCTTCCTaGCAGCAGCTGCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDCEESS*QQLQHD
Trigger: ATCATGCTGCAGCTGCTGGCAGGAAGACTCTTCGCA...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp ACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGTGCATGGAGGTACTGTaGTCTTCCAGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: TTTLRCYRAIQWATQGTKCMEVL*SSRAGV
Trigger: GACCCCTGCCCTGGAAGAGCACAGTACCTCCATGCA...CTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR GCA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTTGCATGGAGGTACTGTaGTCTTCCAGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLCMEVL*SSRAGV
Trigger: GACCCCTGCCCTGGAAGAGCACAGTACCTCCATGCA...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR GCA 90 bp ACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGCCTGGGTGTCACCATaGCTCTTCTGCGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: TLRCYRAIQWATQGTKALAWVSP*LFCGMD
Trigger: ATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC...TAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCGAGAGTCTTTCCCCCTaGGGACTGATAAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVGNTGHEGTREKSRRLLESLSP*GLISCG
Trigger: GCCACAACTTATCAGTCCCCAGGGGGAAAGACTCTC...GAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp GTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACGCCACACCAATGCATaGAGGTACTGTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VGNTGHEGTREKSRRLLLRHTNA*RYCALP
Trigger: TGGAAGAGCACAGTACCTCCATGCATTGGTGTGGCG...TAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR CCA 90 bp GGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCGCCACACCAATGCATaGAGGTACTGTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNSVGNTGHEGTREKSRRRHTNA*RYCALP
Trigger: TGGAAGAGCACAGTACCTCCATGCATTGGTGTGGCG...CCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR TCA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGCTGAATCCCTGGTGTTaGAGTTCTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LRCYRAIQWATQGTKALELNPWC*SSHSHG
Trigger: GCCATGGCTGTGAGAACTTCAACACCAGGGATTCAG...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTGTGGTCTTTCCCCTTaGGACTCCTTTCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: WATQGTKALERSHEGFSYCGLSP*DSFPVT
Trigger: AGTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACA...GTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGCCTGATCCAGCCTTGTaGGAGTCTTTCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGPDPAL*ESFPLG
Trigger: CCCCAGGGGGAAAGACTCTCACAAGGCTGGATCAGG...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268942.12
CDS-3UTR TCA 90 bp TTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCATGGTGGTGTTGCACCTaGTCCAGCCTTGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LQGNSVGNTGHEGTREKSWWCCT*SSLVRV
Trigger: GACTCTCACAAGGCTGGATCAGGTGCAACACCACCA...TGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000577615.5
CDS-3UTR TCA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGACCCCGCCTCACACCTaGAGCGTACTGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGTPPHT*SVLASV
Trigger: CACAGAAGCCAGTACGCTTCAGGTGTGAGGCGGGGT...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGTACACAGACCACGTGTaGGTTACAGCCGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: LRCYRAIQWATQGTKALEYTDHV*VTAGVF
Trigger: GAATACCCCGGCTGTAACTCACACGTGGTCTGTGTA...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTTGCCTGGGTGTCACCATaGCTCTTCTGCGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GTKALERSHEGFSYLNVLAWVSP*LFCGMD
Trigger: ATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC...AAGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACAAGTTCTCACAGCCATaGCTCATGACAGTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: WATQGTKALERSHEGFSYKFSQP*LMTVRS
Trigger: GGAACGGACTGTCATGAGCCATGGCTGTGAGAACTT...GTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp GTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGACCAGGATAGAGCTCTaGAAACCACTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLQGNSVGNTGHEGTREKTRIEL*KPLQPH
Trigger: ATGGGGCTGGAGTGGTTTCCAGAGCTCTATCCTGGT...CTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCAATCAGTAGGGACTCCTaGGAGGTGATCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LQGNSVGNTGHEGTREKSISRDS*EVIPAF
Trigger: AAAGGCAGGGATCACCTCTCAGGAGTCCCTACTGAT...TGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATTGTGATGCTTGGAACTaGCTATCAGATTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDCDAWN*LSDLGS
Trigger: GGAGCCCAAATCTGATAGTCAGTTCCAAGCATCACA...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp GGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTTTGGTGGTGTTGCACCTaGTCCAGCCTTGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GTKALERSHEGFSYLNVLWWCCT*SSLVRV
Trigger: GACTCTCACAAGGCTGGATCAGGTGCAACACCACCA...AAGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000577615.5
CDS-3UTR TCA 90 bp ACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTATACACAGACCACGTGTaGGTTACAGCCGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: TLRCYRAIQWATQGTKALYTDHV*VTAGVF
Trigger: GAATACCCCGGCTGTAACTCACACGTGGTCTGTGTA...TAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCTTCGCCACACCAATaGATGGAGGTACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VLQGNSVGNTGHEGTREKSSPHQ*MEVLCS
Trigger: AGAGCACAGTACCTCCATGCATTGGTGTGGCGAAGA...CTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR CCA 90 bp ATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGAGGATGCTAGTTTTGTaGGTGCTTCTCCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: IQAAAWKQDLSVASYLAGRMLVL*VLLPDP
Trigger: GGGATCCGGGAGAAGCACCCACAAAACTAGCATCCT...CCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp ACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCAGAGAGTCTTTCCCCCTaGGGACTGATAAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TTLRCYRAIQWATQGTKAESLSP*GLISCG
Trigger: GCCACAACTTATCAGTCCCCAGGGGGAAAGACTCTC...TGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp TTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGCCACACCAATGCATaGAGGTACTGTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LQGNSVGNTGHEGTREKSRHTNA*RYCALP
Trigger: TGGAAGAGCACAGTACCTCCATGCATTGGTGTGGCG...TGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR CCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCGCATGGACAGTAGCCTaGGTGTCACCATGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGAWTVA*VSPCLF
Trigger: GAAGAGGCATGGTGACACCCAGGCTACTGTCCATGC...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp CTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAACGTCCTCTCAAGCATaGACAGTAGCCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPLHLGVTGQFSGQHRARTSSQA*TVAWVS
Trigger: TGACACCCAGGCTACTGTCCATGCTTGAGAGGACGT...TCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp GTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTAAGGAGAGGTTTTCTCTaGTGCGTAAAACTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VGNTGHEGTREKSRRLLLRRGFL*CVKLSL
Trigger: AAGGCTCAGTTTTACGCATCAGAGAAAACCTCTCCT...TAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp GTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGAGACGCTCCAGCTTCTaGAGGATTACATCGACTTTC +
Preference number: 4 (lower is better)
Translates to: VLQGNSVGNTGHEGTREKRRSSF*RITSTF
Trigger: GAAAGTCGATGTAATCCTTCAGAAGCTGGAGCGTCT...CTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCAGCCTCGGAAGACCTaGAAGCCCAGGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFQPRKT*KPRRPR
Trigger: CCGGGGCCGCCTGGGCTTTCAGGTCTTCCGAGGCTG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR TCA 90 bp GCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACTCCATTCAGGCATGTCCGTaGATATTCCCAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: AAAWKQDLSVASYLAGHSIQACP*IFPTCS
Trigger: ACTACAAGTTGGGAATATTCACGGACATGCCTGAAT...GGAGTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCTGCGAAGAGTCTTCCTaGCAGCAGCTGCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGCEESS*QQLQHD
Trigger: ATCATGCTGCAGCTGCTGGCAGGAAGACTCTTCGCA...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp GGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAAACCACTCCAGCCCCATaGAGCTGCGAAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLKSYPLMLPLHLGVTGQTTPAP*SCEESS
Trigger: GGAAGACTCTTCGCAGCTGCATGGGGCTGGAGTGGT...TTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTGCATGGAGGTACTGTaGTCTTCCAGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKCMEVL*SSRAGV
Trigger: GACCCCTGCCCTGGAAGAGCACAGTACCTCCATGCA...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATGCATGGAGGTACTGTaGTCTTCCAGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GLKSYPLMLPLHLGVTGQCMEVL*SSRAGV
Trigger: GACCCCTGCCCTGGAAGAGCACAGTACCTCCATGCA...TTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTTCTTCGCCACACCAATaGATGGAGGTACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLSSPHQ*MEVLCS
Trigger: AGAGCACAGTACCTCCATGCATTGGTGTGGCGAAGA...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR GCA 90 bp ATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGGCAAGATCTAAGCGTTaGTTCTTACCTAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: IQAAAWKQDLSVASYLAGARSKR*FLPSGA
Trigger: TGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGC...CCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTGCAAGATCTAAGCGTTaGTTCTTACCTAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GHEGTREKSRRLLLLKRAARSKR*FLPSGA
Trigger: TGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGC...AGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCACGTGGGAGTGTAGCTaGCTTGGACTGATAAACTTT +
Preference number: 4 (lower is better)
Translates to: SVGNTGHEGTREKSRRLLTWECS*LGLINF
Trigger: AAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGT...GAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGCATCTTTTTAGCACGTaGGAGTGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LRCYRAIQWATQGTKALEHLFST*ECSWLG
Trigger: TCCAAGCCAGCTACACTCCCACGTGCTAAAAAGATG...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp GTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGCATCTTTTTAGCACGTaGGAGTGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLQGNSVGNTGHEGTREKHLFST*ECSWLG
Trigger: TCCAAGCCAGCTACACTCCCACGTGCTAAAAAGATG...CTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATCTTCACTGTCTGTTCTaGTTTGTCCACCACCAACTT +
Preference number: 4 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDLHCLF*FVHHQL
Trigger: AAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAG...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp GCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGTTCCAAACCAACAGCTaGCAGTGGAAAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ATTTLRCYRAIQWATQGTFQTNS*QWKGLH
Trigger: GTGAAGACCTTTCCACTGCCAGCTGTTGGTTTGGAA...CGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp TCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCGGGACTGATAAGTTGTaGCTTCTGGGTCATTGCATT +
Preference number: 4 (lower is better)
Translates to: SVGNTGHEGTREKSRRLLGTDKL*LLGHCI
Trigger: AATGCAATGACCCAGAAGCCACAACTTATCAGTCCC...GAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp ACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACCGCCACACCAATGCATaGAGGTACTGTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TQGTKALERSHEGFSYLNRHTNA*RYCALP
Trigger: TGGAAGAGCACAGTACCTCCATGCATTGGTGTGGCG...GTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
ENST00000582793.1
CDS-3UTR CCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGTCCTCTCAAGCATaGACAGTAGCCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGTSSQA*TVAWVS
Trigger: TGACACCCAGGCTACTGTCCATGCTTGAGAGGACGT...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGGTACGGGTCCGACTaGGGGGTACTCGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFWYGSD*GVLATG
Trigger: GCCGGTGGCGAGTACCCCTCAGTCGGACCCGTACCA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR TCA 90 bp ACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGAGACGCTCCAGCTTCTaGAGGATTACATCGACTTTC +
Preference number: 4 (lower is better)
Translates to: TTTLRCYRAIQWATQGTKRRSSF*RITSTF
Trigger: GAAAGTCGATGTAATCCTTCAGAAGCTGGAGCGTCT...CTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp ACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTTGTGGTCTTTCCCCTTaGGACTCCTTTCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: TGHEGTREKSRRLLLLKRCGLSP*DSFPVT
Trigger: AGTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACA...ACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp CTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGATGTGATGCTTGGAACTaGCTATCAGATTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLHLGVTGQFSGQHRARCDAWN*LSDLGS
Trigger: GGAGCCCAAATCTGATAGTCAGTTCCAAGCATCACA...TCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTTGTGATGCTTGGAACTaGCTATCAGATTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLCDAWN*LSDLGS
Trigger: GGAGCCCAAATCTGATAGTCAGTTCCAAGCATCACA...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp AGAACCTTCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGTGGCAGAATGAAACGTaGATGTCAGCCTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RTFKYVLSSMDSSLGVTMWQNET*MSASED
Trigger: GTCTTCCGAGGCTGACATTCACGTTTCATTCTGCCA...CATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGTGGCAGAATGAAACGTaGATGTCAGCCTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLWQNET*MSASED
Trigger: GTCTTCCGAGGCTGACATTCACGTTTCATTCTGCCA...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGPSVAE*NVNVSL
Trigger: GAGGCTGACATTCACGTTTCATTCTGCCACACTCGG...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CAGGATCTCACCTTTGCCTTAAACTTGGCAATACAAGGCAGATATCCTTTTAGGACCCCGCCTCACACCTaGAGCGTACTGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QDLTFALNLAIQGRYPFRTPPHT*SVLASV
Trigger: CACAGAAGCCAGTACGCTTCAGGTGTGAGGCGGGGT...CCTAAAAGGATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp GTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTATCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VGNTGHEGTREKSRRLLLSKLLI*VELRSN
Trigger: GTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGA...TAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359042.6
ENST00000582793.1
CDS-3UTR TCA 90 bp TCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCTCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SVGNTGHEGTREKSRRLLSKLLI*VELRSN
Trigger: GTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGA...GAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359042.6
ENST00000582793.1
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTGGGATGGTGCCACTaGGCAGCCGCGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLGWCH*AAARGR
Trigger: CCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR GCA 90 bp CTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGATCTCTGCATTTCCTTTaGTCCCACACGTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: LPLHLGVTGQFSGQHRARSLHFL*SHTSLL
Trigger: GAGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGA...TCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp TGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACATGACAGTCCGTTCCTaGTTTTCTGTTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: WATQGTKALERSHEGFSYMTVRS*FSVADI
Trigger: TATGTCTGCAACAGAAAAGCAGGAACGGACTGTCAT...GTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp AACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTGTGCTTCCTCGTCATGCTGCGAAGAGTCTTCCTaGCAGCAGCTGCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: NFTSVLHPGAVKCASSSCCEESS*QQLQHD
Trigger: ATCATGCTGCAGCTGCTGGCAGGAAGACTCTTCGCA...GCATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCGGTGCGGTTGGGATaGTGCCACTGCGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSVRLG*CHCAAA
Trigger: CGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGCCCGCCTCTTCCCGTaGGCGGGGTTACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFARLFP*AGLPVG
Trigger: ACCGACTGGTAACCCCGCCCACGGGAAGAGGCGGGC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR CCA 90 bp TTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACATCTTTTTAGCACGTaGGAGTGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LQGNSVGNTGHEGTREKSHLFST*ECSWLG
Trigger: TCCAAGCCAGCTACACTCCCACGTGCTAAAAAGATG...TGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp ACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACACCAACAGCTGGCAGTaGAAAGGTCTTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: TQGTKALERSHEGFSYLNTNSWQ*KGLHCL
Trigger: CAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGGT...GTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp ATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGTTCCAAACCAACAGCTaGCAGTGGAAAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IQAAAWKQDLSVASYLAGFQTNS*QWKGLH
Trigger: GTGAAGACCTTTCCACTGCCAGCTGTTGGTTTGGAA...CCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGGGGACTGATAAGTTGTaGCTTCTGGGTCATTGCATT +
Preference number: 4 (lower is better)
Translates to: LRCYRAIQWATQGTKALEGTDKL*LLGHCI
Trigger: AATGCAATGACCCAGAAGCCACAACTTATCAGTCCC...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp AACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAAGAGAGTCTTTCCCCCTaGGGACTGATAAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: NTGHEGTREKSRRLLLLKESLSP*GLISCG
Trigger: GCCACAACTTATCAGTCCCCAGGGGGAAAGACTCTC...TTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGGCATGGACAGTAGCCTaGGTGTCACCATGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGAWTVA*VSPCLF
Trigger: GAAGAGGCATGGTGACACCCAGGCTACTGTCCATGC...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 72 bp ACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTaGCAGGAAGATTCGGGAATTCAAGCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TCMDSHAAFVCT*QEDSGIQAAAW
Trigger: CCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGCCCTCCGTTGGCTGTaGACAGGCGAGCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFALRWL*TGERFC
Trigger: GCAGAAGCGCTCGCCTGTTCACAGCCAACGGAGGGC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR TCA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGTGGCAGAATGAAACGTaGATGTCAGCCCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGWQNET*MSALRW
Trigger: CCAACGGAGGGCTGACATTCACGTTTCATTCTGCCA...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577615.5
CDS-3UTR TCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCAGACGCTCCAGCTTCTaGAGGATTACATCGACTTTC +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGRRSSF*RITSTF
Trigger: GAAAGTCGATGTAATCCTTCAGAAGCTGGAGCGTCT...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp CTGGCTTCTGTGGGTAGCAGTCTTACTTGTCTACTATTCGTTCTGAGGAGTCTTATCAGTAGGGACTCCTaGGAGGTGATCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LASVGSSLTCLLFVLRSLISRDS*EVIPAF
Trigger: AAAGGCAGGGATCACCTCTCAGGAGTCCCTACTGAT...AAGACTCCTCAGAACGAATAGTAGACAAGTAAGACTGCTACCCACAGAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTGGCTTCTGTGGGTAGCAGTCTTACTTGTCTACTATTCGTTCTGAGGAGTCTTCTGAATCCCTGGTGTTaGAGTTCTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LASVGSSLTCLLFVLRSLLNPWC*SSHSHG
Trigger: GCCATGGCTGTGAGAACTTCAACACCAGGGATTCAG...AAGACTCCTCAGAACGAATAGTAGACAAGTAAGACTGCTACCCACAGAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGCTCCTTTCCTGTGACTaGATCCCTGGTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLLLSCD*IPGVEV
Trigger: AACTTCAACACCAGGGATTCAGTCACAGGAAAGGAG...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGATTGCATTCCAACACTaGGGCTTCCCTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: LMLPLHLGVTGQFSGQHRIAFQH*GFPGNT
Trigger: GGTGTTGCCAGGGAAGCCTCAGTGTTGGAATGCAAT...CCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp GGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAAATTGCATTCCAACACTaGGGCTTCCCTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: GLKSYPLMLPLHLGVTGQIAFQH*GFPGNT
Trigger: GGTGTTGCCAGGGAAGCCTCAGTGTTGGAATGCAAT...TTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp AAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGTGCACCCTGGAGCTGTaGAGTGTGCTTCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: KLSLNATTTLRCYRAIQWCTLEL*SVLPRH
Trigger: ATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCA...CCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGTGCGGTTGGGATGGTaGCACTGCGCAGCCGCGAGA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFVRLGW*HCAAAR
Trigger: TCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCAC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACAGGCGAGCGCTTCTaGCACCCCAGGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTGERF*HPRGGP
Trigger: AGGACCTCCCCTGGGGTGGCAGAAGCGCTCGCCTGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR GCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCTCTCTGCATTTCCTTTaGTCCCACACGTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGSLHFL*SHTSLL
Trigger: GAGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGA...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp ATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGATCTTTCGGGAATTCAAGCTaGTGCCTGGAAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: MHLAGRFGNSSCCLEARSFGNSS*CLEARS
Trigger: AGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAA...AGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp ATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACACAGACCTCACCATGCCTCTTCTaGGGGATGGATGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILFRIKQGRPEVNPLTQTSPCLF*GMDGKV
Trigger: CACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGA...GGTCTGTGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp GGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAAACCAGGATAGAGCTCTaGAAACCACTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GLKSYPLMLPLHLGVTGQTRIEL*KPLQPH
Trigger: ATGGGGCTGGAGTGGTTTCCAGAGCTCTATCCTGGT...TTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp TCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCCTTACACCTGAAGCGTACTaGCTTCTGTGGGTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SSIIFPTQVAAMSRQGSLTPEAY*LLWVAV
Trigger: GACTGCTACCCACAGAAGCCAGTACGCTTCAGGTGT...AAGGCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATTATGGATTACGTGTATaGATTCTCACGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDYGLRV*ILTLHL
Trigger: CAAATGCAGCGTGAGAATCCATACACGTAATCCATA...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGAGGAGAGGTTTTCTCTaGTGCGTAAAACTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: NSSCCLEARSKRCFLPSGRRGFL*CVKLSL
Trigger: AAGGCTCAGTTTTACGCATCAGAGAAAACCTCTCCT...CCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp ATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACAATCAGTAGGGACTCCTaGGAGGTGATCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: MLLITLRAEKLSLNATTTISRDS*EVIPAF
Trigger: AAAGGCAGGGATCACCTCTCAGGAGTCCCTACTGAT...TGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCTCTCTTGTTTCTCCATaGCTTGGATTTTACCTAATG +
Preference number: 4 (lower is better)
Translates to: SVGNTGHEGTREKSRRLLSLVSP*LGFYLM
Trigger: CATTAGGTAAAATCCAAGTCATGGAGAAACAAGAGA...GAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACATGTGGTCTTTCCCCTTaGGACTCCTTTCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: SLNATTTLRCYRAIQWATCGLSP*DSFPVT
Trigger: AGTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACA...TGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp ACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTTCGTCTCCCTCGGAATaGACAAACTTAAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: TGHEGTREKSRRLLLLKRSSPSE*TNLNVV
Trigger: GACCACATTTAAGTTTGTTCATTCCGAGGGAGACGA...ACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp ATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACACAGACCATTGCATTCCAACACTaGGGCTTCCCTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: ILFRIKQGRPEVNPLTQTIAFQH*GFPGNT
Trigger: GGTGTTGCCAGGGAAGCCTCAGTGTTGGAATGCAAT...GGTCTGTGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp ATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCAGTCTACTATTCGTTCTaGGGAGTCTTGTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: MLPLHLGVTGQFSGQHRAVYYSF*GVLSFW
Trigger: CCAGAAAGACAAGACTCCTCAGAACGAATAGTAGAC...TGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp GCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGGCTCTGTGAAGAGATaGGTAGTTACCCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: AVIQMLLITLRAEKLSLNGSVKR*VVTPPH
Trigger: GTGAGGCGGGGTAACTACTCATCTCTTCACAGAGCC...ATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGGGATGGATGGGAAGGTaGATATGGATTACGTGTATG +
Preference number: 4 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLGWMGR*IWITCM
Trigger: CATACACGTAATCCATATTCACCTTCCCATCCATCC...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCAATTCAGGCATGTCCGTaGATATTCCCAACTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LQGNSVGNTGHEGTREKSIQACP*IFPTCS
Trigger: ACTACAAGTTGGGAATATTCACGGACATGCCTGAAT...TGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp GCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGACTCCTTATATGAGTTaGGCTTCGTTCCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: ATTTLRCYRAIQWATQGTTPYMS*ASFQQR
Trigger: TCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGT...CGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359042.6
ENST00000582793.1
CDS-3UTR GCA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTATGACAGTCCGTTCCTaGTTTTCTGTTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLMTVRS*FSVADI
Trigger: TATGTCTGCAACAGAAAAGCAGGAACGGACTGTCAT...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp TTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCATTTACCCCCTCCTTCTaGAGCATGATTTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LQGNSVGNTGHEGTREKSFTPSF*SMILRD
Trigger: GTCTCTTAAAATCATGCTGCAGAAGGAGGGGGTAAA...TGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp CCCGAGGTTAATCCACTTACACAGACCACGTGTGAGTTACAGCCGGGGTATTCATTTACCCCCTCCTTCTaGAGCATGATTTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PEVNPLTQTTCELQPGYSFTPSF*SMILRD
Trigger: GTCTCTTAAAATCATGCTGCAGAAGGAGGGGGTAAA...TGAATACCCCGGCTGTAACTCACACGTGGTCTGTGTAAGTGGATTAACCTCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGGGGAATTCAAGCTGCTaGCTGGAAGCAAGATCTAAG +
Preference number: 4 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGGNSSC*LEARSK
Trigger: CTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCC...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTCATTTGTATGCACCTTaGAGGAAGATTCGGGAATTC +
Preference number: 4 (lower is better)
Translates to: GHEGTREKSRRLLLLKRAHLYAP*RKIREF
Trigger: GAATTCCCGAATCTTCCTGCAAGGTGCATACAAATG...AGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTTCACCATGCCTCTTCTaGGGGATGGATGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AEKLSLNATTTLRCYRAISPCLF*GMDGKV
Trigger: CACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGA...AATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACCAGTCGGTGCGGTTaGGATGGTGCCACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTSRCG*DGATAQ
Trigger: CTGCGCAGTGGCACCATCCCAACCGCACCGACTGGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR CCA 90 bp GGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTTACGTGGGAGTGTAGCTaGCTTGGACTGATAAACTTT +
Preference number: 4 (lower is better)
Translates to: GTKALERSHEGFSYLNVLTWECS*LGLINF
Trigger: AAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGT...AAGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACAGAAGTTCCTGTCTTTaGGGATCAATTTTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: QAAAWKQDLSVASYLAGHRSSCL*GSILSN
Trigger: ATTGGACAAAATTGATCCCCAAAGACAGGAACTTCT...GTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATTTCTGTGTTCTTTTCTaGAGTCTCAGTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDFCVLF*SLSNCN
Trigger: GTTACAGTTACTGAGACTCCAGAAAAGAACACAGAA...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp ATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGATAAGTTGTGGCTTCTaGGTCATTGCATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: IQAAAWKQDLSVASYLAGISCGF*VIAFQH
Trigger: GTGTTGGAATGCAATGACCCAGAAGCCACAACTTAT...CCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp ACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAAGTCATCCCAGAATGTaGAGATGTTTCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: TLRCYRAIQWATQGTKALSHPRM*RCFQWL
Trigger: AAGCCATTGGAAACATCTCCACATTCTGGGATGACT...TAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCCTTGCGTACTGGCTTCTGTaGGTAGCAGTCTTACTTGTC +
Preference number: 4 (lower is better)
Translates to: SSIIFPTQVAAMSRQGSLAYWLL*VAVLLV
Trigger: GACAAGTAAGACTGCTACCCACAGAAGCCAGTACGC...AAGGCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp AATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGATTCAAGCTGCTGCCTaGAAGCAAGATCTAAGCGTT +
Preference number: 4 (lower is better)
Translates to: NSSCCLEARSKRCFLPSGIQAAA*KQDLSV
Trigger: AACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAAT...CCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGAGAGGTTTTCTCTaGTGCGTAAAACTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PLMLPLHLGVTGQFSGQHRRGFL*CVKLSL
Trigger: AAGGCTCAGTTTTACGCATCAGAGAAAACCTCTCCT...GTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCTCCTTTCCTGTGACTaGATCCCTGGTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGLLSCD*IPGVEV
Trigger: AACTTCAACACCAGGGATTCAGTCACAGGAAAGGAG...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAAGACTTTGACTACTTaGCTGCGATACAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: LRCYRAIQWATQGTKALEKTLTT*LRYRMK
Trigger: TTTCATTCTGTATCGCAGTCAAGTAGTCAAAGTCTT...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAAGACTTTGACTACTTaGCTGCGATACAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: RCYRAIQWATQGTKALERKTLTT*LRYRMK
Trigger: TTTCATTCTGTATCGCAGTCAAGTAGTCAAAGTCTT...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCCTGATCCAGCCTTGTaGGAGTCTTTCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFPDPAL*ESFPLG
Trigger: CCCCAGGGGGAAAGACTCTCACAAGGCTGGATCAGG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR TCA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTAACTGGCTGTGCAAATaGACTGATAGGAATTTTGCA +
Preference number: 4 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLNWLCK*TDRNFA
Trigger: TGCAAAATTCCTATCAGTTCATTTGCACAGCCAGTT...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGGGGTTACCAGTCGGTaGGGTTGGGATGGTGCCACT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFGVTSR*GWDGAT
Trigger: AGTGGCACCATCCCAACCGCACCGACTGGTAACCCC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCTCCCGGATCCCCATaGTTCCCCGATCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSPGSP*FPDHRS
Trigger: GGAACGGTGATCGGGGAAGCATGGGGATCCGGGAGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR GCA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTCTCTGCATTTCCTTTaGTCCCACACGTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKSLHFL*SHTSLL
Trigger: GAGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGA...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GATAGGAATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACAGCGGGGCACTCCAATaGCACAGACAGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: DRNFAYMSEKCILTRQLYSGALQ*HRQGRT
Trigger: TGTTCTGCCCTGTCTGTGGCATTGGAGTGCCCCGCT...GTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTTCGGGAATTCAAGCTaGTGCCTGGAAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKFGNSS*CLEARS
Trigger: AGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAA...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCTATGGATTCTCACGCTaGATTTGTATGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGYGFSR*ICMHLA
Trigger: TGCAAGGTGCATACAAATGCAGCGTGAGAATCCATA...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp AAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGACCAACAGCTGGCAGTaGAAAGGTCTTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KLSLNATTTLRCYRAIQWTNSWQ*KGLHCL
Trigger: CAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGGT...CCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACCAACAGCTGGCAGTaGAAAGGTCTTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: QMLLITLRAEKLSLNATTTNSWQ*KGLHCL
Trigger: CAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGGT...AGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTAAGTTCTCACAGCCATaGCTCATGACAGTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QMLLITLRAEKLSLNATTKFSQP*LMTVRS
Trigger: GGAACGGACTGTCATGAGCCATGGCTGTGAGAACTT...AGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp AGAACCTTCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGATAAGTTGTGGCTTCTaGGTCATTGCATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: RTFKYVLSSMDSSLGVTMISCGF*VIAFQH
Trigger: GTGTTGGAATGCAATGACCCAGAAGCCACAACTTAT...CATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp CCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACATTCAAGCTGCTGCCTaGAAGCAAGATCTAAGCGTT +
Preference number: 4 (lower is better)
Translates to: PLMLPLHLGVTGQFSGQHIQAAA*KQDLSV
Trigger: AACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAAT...GTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGTCGTCTCCCTCGGAATaGACAAACTTAAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGSSPSE*TNLNVV
Trigger: GACCACATTTAAGTTTGTTCATTCCGAGGGAGACGA...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp ACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACTTTCCAATGGCTTCTTaGAAGTTATCCACACTACTG +
Preference number: 4 (lower is better)
Translates to: TQGTKALERSHEGFSYLNFPMAS*KLSTLL
Trigger: CAGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAA...GTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp ACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGCTTCCTCGTCATGCTaGGTTTGTTTAGATCTAAAT +
Preference number: 4 (lower is better)
Translates to: TQGTKALERSHEGFSYLNASSSC*VCLDLN
Trigger: ATTTAGATCTAAACAAACTCAGCATGACGAGGAAGC...GTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp ACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTAGACATACTTTTCTCTaGATTTCCTTTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: TGHEGTREKSRRLLLLKRRHTFL*ISFAPT
Trigger: TGTGGGAGCAAAGGAAATGCAGAGAAAAGTATGTCT...ACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACCACTCCAGCCCCATaGAGCTGCGAAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTTPAP*SCEESS
Trigger: GGAAGACTCTTCGCAGCTGCATGGGGCTGGAGTGGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR GCA 90 bp AATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACATCAGTACCACTCCAGCCCCATaGAGCTGCGAAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NFAYMSEKCILTRQLYISTTPAP*SCEESS
Trigger: GGAAGACTCTTCGCAGCTGCATGGGGCTGGAGTGGT...ACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp AATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACAGGATCTCACCTTTaGCTTAAACTTGGCAATACA +
Preference number: 4 (lower is better)
Translates to: NATTTLRCYRAIQWATQGTGSHL*LKLGNT
Trigger: TGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTGT...GCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGGACACACTTCCATTCTaGGTGGATTATCACTCATCC +
Preference number: 4 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKDTLPF*VDYHSS
Trigger: GGATGAGTGATAATCCACCCAGAATGGAAGTGTGTC...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp ACATCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCACGTGGGAGTGTAGCTaGCTTGGACTGATAAACTTT +
Preference number: 4 (lower is better)
Translates to: TSSIIFPTQVAAMSRQGSTWECS*LGLINF
Trigger: AAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGT...GCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAATTCCAAACCAACAGCTaGCAGTGGAAAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQFQTNS*QWKGLH
Trigger: GTGAAGACCTTTCCACTGCCAGCTGTTGGTTTGGAA...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTAGAAGTTCCTGTCTTTaGGGATCAATTTTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLRSSCL*GSILSN
Trigger: ATTGGACAAAATTGATCCCCAAAGACAGGAACTTCT...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp GCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTAAGTTCTCACAGCCATaGCTCATGACAGTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: AEKLSLNATTTLRCYRAIKFSQP*LMTVRS
Trigger: GGAACGGACTGTCATGAGCCATGGCTGTGAGAACTT...AATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGAGTCATCCCAGAATGTaGAGATGTTTCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGSHPRM*RCFQWL
Trigger: AAGCCATTGGAAACATCTCCACATTCTGGGATGACT...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp AGAACCTTCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGTATGGATTACGTGTATaGATTCTCACGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: RTFKYVLSSMDSSLGVTMYGLRV*ILTLHL
Trigger: CAAATGCAGCGTGAGAATCCATACACGTAATCCATA...CATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 72 bp AAAAATGTATCCTCACGAGGCAACTTTACATCAGTATaGCACCCTGGAGCTGTGAAGTGTGCTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: KNVSSRGNFTSV*HPGAVKCASSS
Trigger: TGACGAGGAAGCACACTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AGAACCTTCAAATACGTCCTCTCAAGCATGGACAGTAGCCTGGGTGTCACCATGTCTCTTGTTTCTCCATaGCTTGGATTTTACCTAATG +
Preference number: 4 (lower is better)
Translates to: RTFKYVLSSMDSSLGVTMSLVSP*LGFYLM
Trigger: CATTAGGTAAAATCCAAGTCATGGAGAAACAAGAGA...CATGGTGACACCCAGGCTACTGTCCATGCTTGAGAGGACGTATTTGAAGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGTCGTCTCCCTCGGAATaGACAAACTTAAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: KLSLNATTTLRCYRAIQWSSPSE*TNLNVV
Trigger: GACCACATTTAAGTTTGTTCATTCCGAGGGAGACGA...CCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TTTCTGGATGAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTCTGGCACCCAGTGTGTaGTGCTTGGAACTGACTATC +
Preference number: 4 (lower is better)
Translates to: FLDEAFNLVITYMIGTGCLAPSV*CLELTI
Trigger: GATAGTCAGTTCCAAGCATCACACACTGGGTGCCAG...ACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTCATCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGGTGGTGTTGCACCTaGTCCAGCCTTGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFWWCCT*SSLVRV
Trigger: GACTCTCACAAGGCTGGATCAGGTGCAACACCACCA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR TCA 90 bp GATACTACTTTATTTATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTTGCACCCTGGAGCTGTaGAGTGTGCTTCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: DTTLFIAVIQMLLITLRACTLEL*SVLPRH
Trigger: ATGACGAGGAAGCACACTTCACAGCTCCAGGGTGCA...AGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTATAAATAAAGTAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGGGAATTTTGCATACATaGGCGAAAAATGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLGILHT*AKNVSS
Trigger: TGAGGATACATTTTTCGCTCATGTATGCAAAATTCC...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp CTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTGGATGGATGGGAAGGTaGATATGGATTACGTGTATG +
Preference number: 4 (lower is better)
Translates to: LLITLRAEKLSLNATTTLGWMGR*IWITCM
Trigger: CATACACGTAATCCATATTCACCTTCCCATCCATCC...AAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCCTTCATTTGTATGCACCTTaGAGGAAGATTCGGGAATTC +
Preference number: 4 (lower is better)
Translates to: SSIIFPTQVAAMSRQGSLHLYAP*RKIREF
Trigger: GAATTCCCGAATCTTCCTGCAAGGTGCATACAAATG...AAGGCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCCTTTATGGATTCTCACGCTaGATTTGTATGCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: SSIIFPTQVAAMSRQGSLYGFSR*ICMHLA
Trigger: TGCAAGGTGCATACAAATGCAGCGTGAGAATCCATA...AAGGCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp ACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGAAGGATGGTTGGATTaGATTCTTGATGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: TQGTKALERSHEGFSYLNEGWLD*ILDVFI
Trigger: GATAAAGACATCAAGAATCCAATCCAACCATCCTTC...GTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp AATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCCTTGGTTTCTTCTTaGAAAGTAGTCATTGGTTTA +
Preference number: 4 (lower is better)
Translates to: NSSCCLEARSKRCFLPSGALVSS*KVVIGL
Trigger: TAAACCAATGACTACTTTCCAAGAAGAAACCAAGGC...CCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp ACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAATTCAAAGAAGTCAGTaGAGACTTTTTGTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLRCYRAIQWATQGTKALIQRSQ*RLFVVS
Trigger: GGAAACAACAAAAAGTCTCCACTGACTTCTTTGAAT...TAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TCCAATGGCTTCTTGAAAGTTATCCACACTACTGTATTGTGGATTCTCAGTATCACACCTGAAGCGTACTaGCTTCTGTGGGTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SNGFLKVIHTTVLWILSITPEAY*LLWVAV
Trigger: GACTGCTACCCACAGAAGCCAGTACGCTTCAGGTGT...GATACTGAGAATCCACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGGCAGAATGAAACGTaGATGTCAGCCCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFWQNET*MSALRW
Trigger: CCAACGGAGGGCTGACATTCACGTTTCATTCTGCCA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFPSVAE*NVNVSP
Trigger: AGGGCTGACATTCACGTTTCATTCTGCCACACTCGG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR TCA 90 bp TTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGTTGGATTGGATTCTTaGTGTCTTTATCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LMLPLHLGVTGQFSGQHRVGLDS*CLYLPL
Trigger: CAAAGGCAGATAAAGACATCAAGAATCCAATCCAAC...CCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGTTCTTTGGAGAAATATaGCAATCACCAGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: LMLPLHLGVTGQFSGQHRFFGEI*QSPVGT
Trigger: TGTGCCTACTGGTGATTGTCATATTTCTCCAAAGAA...CCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTATCAGTAGGGACTCCTaGGAGGTGATCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFISRDS*EVIPAF
Trigger: AAAGGCAGGGATCACCTCTCAGGAGTCCCTACTGAT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCTGAATCCCTGGTGTTaGAGTTCTCACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLNPWC*SSHSHG
Trigger: GCCATGGCTGTGAGAACTTCAACACCAGGGATTCAG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TTTCAGATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACACTCCTTTCCTGTGACTaGATCCCTGGTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FQILFRIKQGRPEVNPLTLLSCD*IPGVEV
Trigger: AACTTCAACACCAGGGATTCAGTCACAGGAAAGGAG...TGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATATCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCTGGCACCCAGTGTGTaGTGCTTGGAACTGACTATC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLAPSV*CLELTI
Trigger: GATAGTCAGTTCCAAGCATCACACACTGGGTGCCAG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTATTGCATTCCAACACTaGGGCTTCCCTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFIAFQH*GFPGNT
Trigger: GGTGTTGCCAGGGAAGCCTCAGTGTTGGAATGCAAT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp GATACTACTTTATTTATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DTTLFIAVIQMLLITLRAPSVAE*NVNVSL
Trigger: GAGGCTGACATTCACGTTTCATTCTGCCACACTCGG...AGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTATAAATAAAGTAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFPSVAE*NVNVSL
Trigger: GAGGCTGACATTCACGTTTCATTCTGCCACACTCGG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR TCA 90 bp TCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCCTTTTTCCAATGGCTTCTTaGAAGTTATCCACACTACTG +
Preference number: 4 (lower is better)
Translates to: SSIIFPTQVAAMSRQGSLFPMAS*KLSTLL
Trigger: CAGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAA...AAGGCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAATGACAGTCCGTTCCTaGTTTTCTGTTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQMTVRS*FSVADI
Trigger: TATGTCTGCAACAGAAAAGCAGGAACGGACTGTCAT...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGCGAAGAGTCTTCCTaGCAGCAGCTGCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFCEESS*QQLQHD
Trigger: ATCATGCTGCAGCTGCTGGCAGGAAGACTCTTCGCA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR GCA 90 bp TGTTTCCAATGGCTTCTTGAAAGTTATCCACACTACTGTATTGTGGATTCTCAGTCTTCGCCACACCAATaGATGGAGGTACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CFQWLLESYPHYCIVDSQSSPHQ*MEVLCS
Trigger: AGAGCACAGTACCTCCATGCATTGGTGTGGCGAAGA...CTGAGAATCCACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp GATAGGAATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACTCTTCGCCACACCAATaGATGGAGGTACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DRNFAYMSEKCILTRQLYSSPHQ*MEVLCS
Trigger: AGAGCACAGTACCTCCATGCATTGGTGTGGCGAAGA...GTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAGGATGCTAGTTTTGTaGGTGCTTCTCCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFRMLVL*VLLPDP
Trigger: GGGATCCGGGAGAAGCACCCACAAAACTAGCATCCT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp GCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGACACACTTCCATTCTaGGTGGATTATCACTCATCC +
Preference number: 4 (lower is better)
Translates to: AVIQMLLITLRAEKLSLNDTLPF*VDYHSS
Trigger: GGATGAGTGATAATCCACCCAGAATGGAAGTGTGTC...ATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTCTTCACTGTCTGTTCTaGTTTGTCCACCACCAACTT +
Preference number: 4 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLLHCLF*FVHHQL
Trigger: AAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAG...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACCAGGATAGAGCTCTaGAAACCACTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTRIEL*KPLQPH
Trigger: ATGGGGCTGGAGTGGTTTCCAGAGCTCTATCCTGGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp AATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACATCAGTACCAGGATAGAGCTCTaGAAACCACTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NFAYMSEKCILTRQLYISTRIEL*KPLQPH
Trigger: ATGGGGCTGGAGTGGTTTCCAGAGCTCTATCCTGGT...ACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAATAAGTTGTGGCTTCTaGGTCATTGCATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQISCGF*VIAFQH
Trigger: GTGTTGGAATGCAATGACCCAGAAGCCACAACTTAT...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CAGGATCTCACCTTTGCCTTAAACTTGGCAATACAAGGCAGATATCCTTTTAGGGGGACTGATAAGTTGTaGCTTCTGGGTCATTGCATT +
Preference number: 4 (lower is better)
Translates to: QDLTFALNLAIQGRYPFRGTDKL*LLGHCI
Trigger: AATGCAATGACCCAGAAGCCACAACTTATCAGTCCC...CCTAAAAGGATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGAGAGTCTTTCCCCCTaGGGACTGATAAGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFESLSP*GLISCG
Trigger: GCCACAACTTATCAGTCCCCAGGGGGAAAGACTCTC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGGGAGTCTTGTCTTTCTaGATGAAGCTTTTAATCTGG +
Preference number: 4 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGGVLSF*MKLLIW
Trigger: CCAGATTAAAAGCTTCATCCAGAAAGACAAGACTCC...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp GATAGGAATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACGCGTACTGGCTTCTGTaGGTAGCAGTCTTACTTGTC +
Preference number: 4 (lower is better)
Translates to: DRNFAYMSEKCILTRQLYAYWLL*VAVLLV
Trigger: GACAAGTAAGACTGCTACCCACAGAAGCCAGTACGC...GTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 72 bp GAATATGGATTACGTGTATGGATTCTCACGCTGCATTaGTATGCACCTTGCAGGAAGATTCGGGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: EYGLRVWILTLH*YAPCRKIREFK
Trigger: CTTGAATTCCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAATCCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACATCTCTTGTTTCTCCATaGCTTGGATTTTACCTAATG +
Preference number: 4 (lower is better)
Translates to: SLNATTTLRCYRAIQWATSLVSP*LGFYLM
Trigger: CATTAGGTAAAATCCAAGTCATGGAGAAACAAGAGA...TGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGTGGTCTTTCCCCTTaGGACTCCTTTCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFCGLSP*DSFPVT
Trigger: AGTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGAAGACTTTGACTACTTaGCTGCGATACAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGKTLTT*LRYRMK
Trigger: TTTCATTCTGTATCGCAGTCAAGTAGTCAAAGTCTT...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGGCAGAATGAAACGTaGATGTCAGCCTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFWQNET*MSASED
Trigger: GTCTTCCGAGGCTGACATTCACGTTTCATTCTGCCA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR TCA 90 bp GGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAAGGAATTTTGCATACATaGGCGAAAAATGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: GLKSYPLMLPLHLGVTGQGILHT*AKNVSS
Trigger: TGAGGATACATTTTTCGCTCATGTATGCAAAATTCC...TTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGAACTGGCTGTGCAAATaGACTGATAGGAATTTTGCA +
Preference number: 4 (lower is better)
Translates to: KLSLNATTTLRCYRAIQWNWLCK*TDRNFA
Trigger: TGCAAAATTCCTATCAGTTCATTTGCACAGCCAGTT...CCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp AATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACATCAGTCAACAAAGAAACTTGTaGGAGTCTTTCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NFAYMSEKCILTRQLYISQQRNL*ESFPLG
Trigger: CCCCAGGGGGAAAGACTCTCACAAGTTTCTTTGTTG...ACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCAACAAAGAAACTTGTaGGAGTCTTTCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFQQRNL*ESFPLG
Trigger: CCCCAGGGGGAAAGACTCTCACAAGTTTCTTTGTTG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR GCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAAGACATACTTTTCTCTaGATTTCCTTTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQRHTFL*ISFAPT
Trigger: TGTGGGAGCAAAGGAAATGCAGAGAAAAGTATGTCT...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR GCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAACAGGATCTCACCTTTaGCTTAAACTTGGCAATACA +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQTGSHL*LKLGNT
Trigger: TGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTGT...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TTTCTGGATGAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGGGAATTCAAGCTGCTaGCTGGAAGCAAGATCTAAG +
Preference number: 4 (lower is better)
Translates to: FLDEAFNLVITYMIGTGCGNSSC*LEARSK
Trigger: CTTAGATCTTGCTTCCAGGCAGCAGCTTGAATTCCC...ACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTCATCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TTTCAGATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACAGACACACTTCCATTCTaGGTGGATTATCACTCATCC +
Preference number: 4 (lower is better)
Translates to: FQILFRIKQGRPEVNPLTDTLPF*VDYHSS
Trigger: GGATGAGTGATAATCCACCCAGAATGGAAGTGTGTC...TGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACCAACAGCTGGCAGTaGAAAGGTCTTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTNSWQ*KGLHCL
Trigger: CAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAAGTTCTCACAGCCATaGCTCATGACAGTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFKFSQP*LMTVRS
Trigger: GGAACGGACTGTCATGAGCCATGGCTGTGAGAACTT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAGGAGTCTTGTCTTTCTaGATGAAGCTTTTAATCTGG +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQGVLSF*MKLLIW
Trigger: CCAGATTAAAAGCTTCATCCAGAAAGACAAGACTCC...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
3UTR CAA 72 bp GTCATCCCAGAATGTGGAGATGTTTCCAATGGCTTCTaGAAAGTTATCCACACTACTGTATTGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: VIPECGDVSNGF*KVIHTTVLWIL
Trigger: GAGAATCCACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAACATCTCCACATTCTGGGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTGTTGGATTGGATTCTTaGTGTCTTTATCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLVGLDS*CLYLPL
Trigger: CAAAGGCAGATAAAGACATCAAGAATCCAATCCAAC...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAGACGCTCCAGCTTCTaGAGGATTACATCGACTTTC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFRRSSF*RITSTF
Trigger: GAAAGTCGATGTAATCCTTCAGAAGCTGGAGCGTCT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCTCCTTTCCTGTGACTaGATCCCTGGTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLLSCD*IPGVEV
Trigger: AACTTCAACACCAGGGATTCAGTCACAGGAAAGGAG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTGTGATGCTTGGAACTaGCTATCAGATTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFCDAWN*LSDLGS
Trigger: GGAGCCCAAATCTGATAGTCAGTTCCAAGCATCACA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTGCTTCCTCGTCATGCTaGGTTTGTTTAGATCTAAAT +
Preference number: 4 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLASSSC*VCLDLN
Trigger: ATTTAGATCTAAACAAACTCAGCATGACGAGGAAGC...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TTTCTGGATGAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGTCTACTATTCGTTCTaGGGAGTCTTGTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FLDEAFNLVITYMIGTGCVYYSF*GVLSFW
Trigger: CCAGAAAGACAAGACTCCTCAGAACGAATAGTAGAC...ACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTCATCCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTACTCCTTATATGAGTTaGGCTTCGTTCCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLTPYMS*ASFQQR
Trigger: TCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGT...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359042.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCTCTGCATTTCCTTTaGTCCCACACGTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSLHFL*SHTSLL
Trigger: GAGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCCACTGTACGCCCTTTaGTGTTCCAGAGCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFPLYAL*CSRALS
Trigger: ACTTAAAGCTCTGGAACAGCAAAGGGCGTACAGTGG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCATCTTTTTAGCACGTaGGAGTGTAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFHLFST*ECSWLG
Trigger: TCCAAGCCAGCTACACTCCCACGTGCTAAAAAGATG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp GAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGCAAATGAACTTCACTGTCTGTTCTaGTTTGTCCACCACCAACTT +
Preference number: 4 (lower is better)
Translates to: EAFNLVITYMIGTGCANELHCLF*FVHHQL
Trigger: AAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAG...TTCATTTGCACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTCCAAACCAACAGCTaGCAGTGGAAAGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFFQTNS*QWKGLH
Trigger: GTGAAGACCTTTCCACTGCCAGCTGTTGGTTTGGAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp ACATCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCATTTTGAAGGATGGTTaGATTGGATTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: TSSIIFPTQVAAMSRQGSILKDG*IGFLMS
Trigger: AGACATCAAGAATCCAATCCAACCATCCTTCAAAAT...GCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp CAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTGCCTTGGTTTCTTCTTaGAAAGTAGTCATTGGTTTA +
Preference number: 4 (lower is better)
Translates to: QMLLITLRAEKLSLNATTALVSS*KVVIGL
Trigger: TAAACCAATGACTACTTTCCAAGAAGAAACCAAGGC...AGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTTGGAGATGTTTCCAATaGCTTCTTGAAAGTTATCCA +
Preference number: 4 (lower is better)
Translates to: LLITLRAEKLSLNATTTLWRCFQ*LLESYP
Trigger: TGGATAACTTTCAAGAAGCCATTGGAAACATCTCCA...AAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAATGGAGATGTTTCCAATaGCTTCTTGAAAGTTATCCA +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQWRCFQ*LLESYP
Trigger: TGGATAACTTTCAAGAAGCCATTGGAAACATCTCCA...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAGGAGAGGTTTTCTCTaGTGCGTAAAACTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFRRGFL*CVKLSL
Trigger: AAGGCTCAGTTTTACGCATCAGAGAAAACCTCTCCT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCGTCTCCCTCGGAATaGACAAACTTAAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSSPSE*TNLNVV
Trigger: GACCACATTTAAGTTTGTTCATTCCGAGGGAGACGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTCCAGAGCTTTAAGTaGTGTCCAGGTCAACACTAC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFFQSFK*CPGQHY
Trigger: GTAGTGTTGACCTGGACATCACTTAAAGCTCTGGAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGACACACTTCCATTCTaGGTGGATTATCACTCATCC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFDTLPF*VDYHSS
Trigger: GGATGAGTGATAATCCACCCAGAATGGAAGTGTGTC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACGTGGGAGTGTAGCTaGCTTGGACTGATAAACTTT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTWECS*LGLINF
Trigger: AAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCTTCACTGTCTGTTCTaGTTTGTCCACCACCAACTT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLHCLF*FVHHQL
Trigger: AAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTGAAGGATGGTTGGATTaGATTCTTGATGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLEGWLD*ILDVFI
Trigger: GATAAAGACATCAAGAATCCAATCCAACCATCCTTC...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp CTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTATTTTGAAGGATGGTTaGATTGGATTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLITLRAEKLSLNATTTLILKDG*IGFLMS
Trigger: AGACATCAAGAATCCAATCCAACCATCCTTCAAAAT...AAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTGCCTTGGTTTCTTCTTaGAAAGTAGTCATTGGTTTA +
Preference number: 4 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLALVSS*KVVIGL
Trigger: TAAACCAATGACTACTTTCCAAGAAGAAACCAAGGC...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp GCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATTTCTGTGTTCTTTTCTaGAGTCTCAGTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: AVIQMLLITLRAEKLSLNFCVLF*SLSNCN
Trigger: GTTACAGTTACTGAGACTCCAGAAAAGAACACAGAA...ATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGGGACTGATAAGTTGTaGCTTCTGGGTCATTGCATT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFGTDKL*LLGHCI
Trigger: AATGCAATGACCCAGAAGCCACAACTTATCAGTCCC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAATTCAAAGAAGTCAGTaGAGACTTTTTGTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQIQRSQ*RLFVVS
Trigger: GGAAACAACAAAAAGTCTCCACTGACTTCTTTGAAT...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSKLLI*VELRSN
Trigger: GTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR GCA 90 bp GAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGCAAATGAAAGACATACTTTTCTCTaGATTTCCTTTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: EAFNLVITYMIGTGCANERHTFL*ISFAPT
Trigger: TGTGGGAGCAAAGGAAATGCAGAGAAAAGTATGTCT...TTCATTTGCACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTATGACAGTCCGTTCCTaGTTTTCTGTTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFMTVRS*FSVADI
Trigger: TATGTCTGCAACAGAAAAGCAGGAACGGACTGTCAT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCTGTTAAGTATGTATTaGAGTCGTCTCCACTGTACG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLLSMY*SRLHCT
Trigger: CGTACAGTGGAGACGACTGCAATACATACTTAACAG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TTTCAGATATTATTCAGGATTAAACAAGGCCGCCCCGAGGTTAATCCACTTACATTCTGTGTTCTTTTCTaGAGTCTCAGTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: FQILFRIKQGRPEVNPLTFCVLF*SLSNCN
Trigger: GTTACAGTTACTGAGACTCCAGAAAAGAACACAGAA...TGTAAGTGGATTAACCTCGGGGCGGCCTTGTTTAATCCTGAATAATATCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTATAAGTTGTGGCTTCTaGGTCATTGCATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFISCGF*VIAFQH
Trigger: GTGTTGGAATGCAATGACCCAGAAGCCACAACTTAT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
3UTR CAA 72 bp TTATTTATAGCAGTGATACAAATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCCCTTAATGCTACCACT +
Preference number: 4 (lower is better)
Translates to: LFIAVIQMLLIT*RAEKLSLNATT
Trigger: AGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTATAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000535032.6
ENST00000577615.5
3UTR CAA 72 bp TGGAGCTGTGAAGTGTGCTTCCTCGTCATGCTGAGTTaGTTTAGATCTAAATCTCAGAAAATAATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: WSCEVCFLVMLS*FRSKSQKIISY
Trigger: ATAGCTGATTATTTTCTGAGATTTAGATCTAAACAAACTCAGCATGACGAGGAAGCACACTTCACAGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGTTGGATTGGATTCTTaGTGTCTTTATCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFVGLDS*CLYLPL
Trigger: CAAAGGCAGATAAAGACATCAAGAATCCAATCCAAC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp GATACTACTTTATTTATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGTTGGATTGGATTCTTaGTGTCTTTATCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: DTTLFIAVIQMLLITLRAVGLDS*CLYLPL
Trigger: CAAAGGCAGATAAAGACATCAAGAATCCAATCCAAC...AGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTATAAATAAAGTAGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTCTTTGGAGAAATATaGCAATCACCAGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFFFGEI*QSPVGT
Trigger: TGTGCCTACTGGTGATTGTCATATTTCTCCAAAGAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp GATACTACTTTATTTATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTTTCTTTGGAGAAATATaGCAATCACCAGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: DTTLFIAVIQMLLITLRAFFGEI*QSPVGT
Trigger: TGTGCCTACTGGTGATTGTCATATTTCTCCAAAGAA...AGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTATAAATAAAGTAGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR TCA 90 bp AATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACATCAGTTTCTTTGGAGAAATATaGCAATCACCAGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: NFAYMSEKCILTRQLYISFFGEI*QSPVGT
Trigger: TGTGCCTACTGGTGATTGTCATATTTCTCCAAAGAA...ACTGATGTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACTCCTTATATGAGTTaGGCTTCGTTCCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTPYMS*ASFQQR
Trigger: TCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR GCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAGACATACTTTTCTCTaGATTTCCTTTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFRHTFL*ISFAPT
Trigger: TGTGGGAGCAAAGGAAATGCAGAGAAAAGTATGTCT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCTCTTGTTTCTCCATaGCTTGGATTTTACCTAATG +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSLVSP*LGFYLM
Trigger: CATTAGGTAAAATCCAAGTCATGGAGAAACAAGAGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR TCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAAGACTTTGACTACTTaGCTGCGATACAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFKTLTT*LRYRMK
Trigger: TTTCATTCTGTATCGCAGTCAAGTAGTCAAAGTCTT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGAAGGATGGTTGGATTaGATTCTTGATGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFEGWLD*ILDVFI
Trigger: GATAAAGACATCAAGAATCCAATCCAACCATCCTTC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TGTTTCCAATGGCTTCTTGAAAGTTATCCACACTACTGTATTGTGGATTCTCAGATTTTGAAGGATGGTTaGATTGGATTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: CFQWLLESYPHYCIVDSQILKDG*IGFLMS
Trigger: AGACATCAAGAATCCAATCCAACCATCCTTCAAAAT...CTGAGAATCCACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGCCTTGGTTTCTTCTTaGAAAGTAGTCATTGGTTTA +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFALVSS*KVVIGL
Trigger: TAAACCAATGACTACTTTCCAAGAAGAAACCAAGGC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAGAAGTTCCTGTCTTTaGGGATCAATTTTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFRSSCL*GSILSN
Trigger: ATTGGACAAAATTGATCCCCAAAGACAGGAACTTCT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTCTGTGTTCTTTTCTaGAGTCTCAGTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFFCVLF*SLSNCN
Trigger: GTTACAGTTACTGAGACTCCAGAAAAGAACACAGAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CCA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTATTTTGAAGGATGGTTaGATTGGATTCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFILKDG*IGFLMS
Trigger: AGACATCAAGAATCCAATCCAACCATCCTTCAAAAT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS GCA 90 bp CCCGCTCCGAGCCCGCCTCTTCCCGTGGGCGGGGTTACCAGTCGGTaGGGTTGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGGTACC +
Preference number: 5 (lower is better)
Translates to: PAPSPPLPVGGVTSR*GWDGATAQPREGGT
Trigger: GGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGGCGGGCTCGGAGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS CCA 90 bp CCGAGCCCGCCTCTTCCCGTGGGCGGGGTTACCAGTCGGTGCGGTTaGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGGTACCACGGCG +
Preference number: 5 (lower is better)
Translates to: PSPPLPVGGVTSRCG*DGATAQPREGGTTA
Trigger: CGCCGTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGGCGGGCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS GCA 90 bp TCCCGTGGGCGGGGTTACCAGTCGGTGCGGTTGGGATGGTGCCACTaGGCAGCCGCGAGAGGGCGGTACCACGGCGGCAGCGACATGGGG +
Preference number: 5 (lower is better)
Translates to: SRGRGYQSVRLGWCH*AAARGRYHGGSDMG
Trigger: CCCCATGTCGCTGCCGCCGTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS GCA 90 bp GCCTCTTCCCGTGGGCGGGGTTACCAGTCGGTGCGGTTGGGATGGTaGCACTGCGCAGCCGCGAGAGGGCGGTACCACGGCGGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: ASSRGRGYQSVRLGW*HCAAARGRYHGGSD
Trigger: GTCGCTGCCGCCGTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS CCA 90 bp GCTGTTCTGATTCTGCGGAGTGGATGGGGTCGGCCCGGCAGCTCCTaGGTCAGGGACAGCCGTTCCCGCAGCCCCACCGAGGATTTCCTC +
Preference number: 5 (lower is better)
Translates to: AVLILRSGWGRPGSS*VRDSRSRSPTEDFL
Trigger: GAGGAAATCCTCGGTGGGGCTGCGGGAACGGCTGTCCCTGACCCAGGAGCTGCCGGGCCGACCCCATCCACTCCGCAGAATCAGAACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS CCA 90 bp AAAGCTGTTCTGATTCTGCCAGCTGTTCTGATTCTGCGGAGTGGATaGGGTCGGCCCGGCAGCTCCTGGGTCAGGGACAGCCGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: KAVLILPAVLILRSG*GRPGSSWVRDSRSR
Trigger: GCGGGAACGGCTGTCCCTGACCCAGGAGCTGCCGGGCCGACCCCATCCACTCCGCAGAATCAGAACAGCTGGCAGAATCAGAACAGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS CCA 90 bp CCTGAAAGCTGTTCTGATTCTGCCAGCTGTTCTGATTCTGCGGAGTaGATGGGGTCGGCCCGGCAGCTCCTGGGTCAGGGACAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: PESCSDSASCSDSAE*MGSARQLLGQGQPF
Trigger: GAACGGCTGTCCCTGACCCAGGAGCTGCCGGGCCGACCCCATCCACTCCGCAGAATCAGAACAGCTGGCAGAATCAGAACAGCTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS-3UTR CAA 90 bp GGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTGGGGACTGATAAGTaGTGGCTTCTGGGTCATTGC +
Preference number: 5 (lower is better)
Translates to: GNSVGNTGHEGTREKSRRLGTDK*WLLGHC
Trigger: GCAATGACCCAGAAGCCACAACTTATCAGTCCCCAG...CCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GCCTGGGTGTCACCATGCCTCTTCTGCGGGATGGATGGGAAGGTGAATATGGATACTGAATCCCTGGTGTaGAAGTTCTCACAGCCATGG +
Preference number: 5 (lower is better)
Translates to: AWVSPCLFCGMDGKVNMDTESLV*KFSQPW
Trigger: CCATGGCTGTGAGAACTTCAACACCAGGGATTCAGT...ATCCATATTCACCTTCCCATCCATCCCGCAGAAGAGGCATGGTGACACCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACACTGAATCCCTGGTGTaGAAGTTCTCACAGCCATGG +
Preference number: 5 (lower is better)
Translates to: WATQGTKALERSHEGFSYTESLV*KFSQPW
Trigger: CCATGGCTGTGAGAACTTCAACACCAGGGATTCAGT...GTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTAATGTGGTCTTTCCCCTaGAGACTCCTTTCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: VGNTGHEGTREKSRRLLLMWSFP*RLLSCD
Trigger: GTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACAT...TAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS TCA 90 bp GGAGGTTGTAAGTCCGGCAGGGGGTTCCAAACTCCTTATATGAGTTaGGCTTCGTTCCAACAAAGAAACCGAGCTCCTCCAGGAGGATGC +
Preference number: 5 (lower is better)
Translates to: GGCKSGRGFQTPYMS*ASFQQRNRAPPGGC
Trigger: GCATCCTCCTGGAGGAGCTCGGTTTCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGAACCCCCTGCCGGACTTACAACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582793.1
CDS-3UTR CAA 90 bp TGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTCTCTGCATTTCCTTaGCTCCCACACGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: WATQGTKALERSHEGFSYFSAFP*LPHVST
Trigger: AGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGAA...GTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGTTCTCTGCATTTCCTTaGCTCCCACACGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: GNSVGNTGHEGTREKSRRFSAFP*LPHVST
Trigger: AGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGAA...CCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGACTGAATCCCTGGTGTaGAAGTTCTCACAGCCATGG +
Preference number: 5 (lower is better)
Translates to: LRCYRAIQWATQGTKALETESLV*KFSQPW
Trigger: CCATGGCTGTGAGAACTTCAACACCAGGGATTCAGT...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGATGTGGTCTTTCCCCTaGAGACTCCTTTCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LRCYRAIQWATQGTKALEMWSFP*RLLSCD
Trigger: GTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACAT...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp ACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTGGGGACTGATAAGTaGTGGCTTCTGGGTCATTGC +
Preference number: 5 (lower is better)
Translates to: TTLRCYRAIQWATQGTKALGTDK*WLLGHC
Trigger: GCAATGACCCAGAAGCCACAACTTATCAGTCCCCAG...TGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGACTGTCTGTTCTGGTTaGTCCACCACCAACTTAGAA +
Preference number: 5 (lower is better)
Translates to: GNSVGNTGHEGTREKSRRTVCSG*STTNLE
Trigger: TTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGT...CCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGCTGGGGACTGATAAGTaGTGGCTTCTGGGTCATTGC +
Preference number: 5 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLLGTDK*WLLGHC
Trigger: GCAATGACCCAGAAGCCACAACTTATCAGTCCCCAG...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp ACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGTTCCTTATGGTGGTGTaGCACCTGATCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: TTTLRCYRAIQWATQGTKFLMVV*HLIQPC
Trigger: ACAAGGCTGGATCAGGTGCAACACCACCATAAGGAA...CTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000577615.5
CDS-3UTR CAA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: RCYRAIQWATQGTKALERMLLIT*RAEKLS
Trigger: GGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp CTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGATTCTCACGCTGCATTaGTATGCACCTTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LRCYRAIQWATQGTKALEILTLH*YAPCRK
Trigger: CTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAAT...CTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS TCA 90 bp AAGTTGGAGGTTGTAAGTCCGGCAGGGGGTTCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAACAAAGAAACCGAGCTCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KLEVVSPAGGSKLLI*VELRSNKETELLQE
Trigger: CTCCTGGAGGAGCTCGGTTTCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGAACCCCCTGCCGGACTTACAACCTCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582793.1
CDS-3UTR CAA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAACTGTCTGTTCTGGTTaGTCCACCACCAACTTAGAA +
Preference number: 5 (lower is better)
Translates to: RCYRAIQWATQGTKALERTVCSG*STTNLE
Trigger: TTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGT...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: GHEGTREKSRRLLLLKRAMLLIT*RAEKLS
Trigger: GGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT...AGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp AGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGAGGAGGATGCTAGTTTaGTGGGTGCTTCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: SYPLMLPLHLGVTGQFSGRRMLV*WVLLPD
Trigger: ATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCT...CCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTACTGTCTGTTCTGGTTaGTCCACCACCAACTTAGAA +
Preference number: 5 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLTVCSG*STTNLE
Trigger: TTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGT...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGACAAAGAAGGTTCTATaGAGCCAACCAGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: VLQGNSVGNTGHEGTREKTKKVL*SQPVKT
Trigger: CGTCTTTACTGGTTGGCTCAATAGAACCTTCTTTGT...CTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp ATGCACCTTGCAGGAAGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGATCTTTCTCTGCATTTCCTTaGCTCCCACACGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: MHLAGRFGNSSCCLEARSFSAFP*LPHVST
Trigger: AGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGAA...AGATCTTGCTTCCAGGCAGCAGCTTGAATTCCCGAATCTTCCTGCAAGGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp GGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGACCTTTGCCTTAAACTaGGCAATACAAGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: GNSVGNTGHEGTREKSRRTFALN*AIQGRY
Trigger: ATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGT...CCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp CAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTCTTACCTAGCGGGGCACCTCGTCATGCTGAGTTaGTTTAGATCTAAATCTCAG +
Preference number: 5 (lower is better)
Translates to: QAAAWKQDLSVASYLAGHLVMLS*FRSKSQ
Trigger: CTGAGATTTAGATCTAAACAAACTCAGCATGACGAG...GTGCCCCGCTAGGTAAGAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTACCAGTCGGTGCGGTaGGGATGGTGCCACTGCGCA +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFYQSVR*GWCHCA
Trigger: TGCGCAGTGGCACCATCCCAACCGCACCGACTGGTA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR CAA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAGGACTGATAAACTTTTaGATCAGTAGGTATGGTTGG +
Preference number: 5 (lower is better)
Translates to: RCYRAIQWATQGTKALERGLINF*ISRYGW
Trigger: CCAACCATACCTACTGATCAAAAAGTTTATCAGTCC...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp GGGCTGAAAAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCCTTATGGTGGTGTaGCACCTGATCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: GLKSYPLMLPLHLGVTGQFLMVV*HLIQPC
Trigger: ACAAGGCTGGATCAGGTGCAACACCACCATAAGGAA...TTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000577615.5
CDS-3UTR CAA 90 bp AGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGACTCGTCATGCTGAGTTaGTTTAGATCTAAATCTCAG +
Preference number: 5 (lower is better)
Translates to: RCYRAIQWATQGTKALERLVMLS*FRSKSQ
Trigger: CTGAGATTTAGATCTAAACAAACTCAGCATGACGAG...TCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS GCA 90 bp CTGGTGTTGAAGTTCTCACAGCCATGGCTCATGACAGTCCGTTCCTaGTTTTCTGTTGCAGACATACTTTTCTCTGCATTTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LVLKFSQPWLMTVRS*FSVADILFSAFPLL
Trigger: GAGCAAAGGAAATGCAGAGAAAAGTATGTCTGCAACAGAAAAGCAGGAACGGACTGTCATGAGCCATGGCTGTGAGAACTTCAACACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAATGTCAGCCCTCCGTaGGCTGTGAACAGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFNVSPP*AVNRRA
Trigger: CGCTCGCCTGTTCACAGCCAACGGAGGGCTGACATT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR CAA 90 bp CTGCGGGATGGATGGGAAGGTGAATATGGATTACGTGTATGGATTCTCACGCTGGGTAAGTCCTTTCTCTaGTTTCTCCATGACTTGGAT +
Preference number: 5 (lower is better)
Translates to: LRDGWEGEYGLRVWILTLGKSFL*FLHDLD
Trigger: ATCCAAGTCATGGAGAAACAAGAGAAAGGACTTACC...CAGCGTGAGAATCCATACACGTAATCCATATTCACCTTCCCATCCATCCCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp ACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGGTAAGTCCTTTCTCTaGTTTCTCCATGACTTGGAT +
Preference number: 5 (lower is better)
Translates to: TQGTKALERSHEGFSYLNGKSFL*FLHDLD
Trigger: ATCCAAGTCATGGAGAAACAAGAGAAAGGACTTACC...GTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp AATTCAGTGGGCAACACAGGGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTGTTTCCAATGGCTTCTaGAAAGTTATCCACACTACT +
Preference number: 5 (lower is better)
Translates to: NSVGNTGHEGTREKSRRLVSNGF*KVIHTT
Trigger: AGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAAC...AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp ACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGGGCACGAAGAACTCCTTATATGAGTaGAGCTTCGTTCCAACAAAG +
Preference number: 5 (lower is better)
Translates to: TTTLRCYRAIQWATQGTKNSLYE*SFVPTK
Trigger: CTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTT...CTTCGTGCCCTGTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359042.6
ENST00000582793.1
CDS TCA 90 bp AAGTTGGAGGTTGTAAGTCCGGCAGGGGGTTCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAACAAAGAAACTTGTGAGAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: KLEVVSPAGGSKLLI*VELRSNKETCESLS
Trigger: GGAAAGACTCTCACAAGTTTCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGAACCCCCTGCCGGACTTACAACCTCCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
CDS-3UTR CAA 90 bp TACGTGTATGGATTCTCACGCTGCATTTGTATGCACCTTGCAGGAAGATTCGGGACAAAGAAGGTTCTATaGAGCCAACCAGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: YVYGFSRCICMHLAGRFGTKKVL*SQPVKT
Trigger: CGTCTTTACTGGTTGGCTCAATAGAACCTTCTTTGT...CCCGAATCTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTATGTGGTCTTTCCCCTaGAGACTCCTTTCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLMWSFP*RLLSCD
Trigger: GTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACAT...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGAACTTTACATCAGTATaGCACCCTGGAGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKNFTSV*HPGAVK
Trigger: CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTT...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp ACATCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCGCATTTGTATGCACCTaGCAGGAAGATTCGGGAATT +
Preference number: 5 (lower is better)
Translates to: TSSIIFPTQVAAMSRQGSAFVCT*QEDSGI
Trigger: AATTCCCGAATCTTCCTGCAAGGTGCATACAAATGC...GCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp GGCACGAAGGCACTAGAGAGAAGTCACGAAGGCTTCTCCTACTTAAACGTGCTTAACTCCTTATATGAGTaGAGCTTCGTTCCAACAAAG +
Preference number: 5 (lower is better)
Translates to: GTKALERSHEGFSYLNVLNSLYE*SFVPTK
Trigger: CTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTT...AAGCACGTTTAAGTAGGAGAAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359042.6
ENST00000582793.1
CDS TCA 90 bp TTGACTGCGATACAGAATGAAACTGGTAAGTCGTCTCCCTCGGAATaGACAAACTTAAATGTGGTCTTTCCCCTTGAGACTCCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LTAIQNETGKSSPSE*TNLNVVFPLETPFL
Trigger: CAGGAAAGGAGTCTCAAGGGGAAAGACCACATTTAAGTTTGTTCATTCCGAGGGAGACGACTTACCAGTTTCATTCTGTATCGCAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
CDS-3UTR CAA 90 bp GAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGCAAATGAAAGGAGGATGCTAGTTTaGTGGGTGCTTCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: EAFNLVITYMIGTGCANERRMLV*WVLLPD
Trigger: ATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCT...TTCATTTGCACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS CCA 90 bp TTCCAAACCAACAGCTGGCAGTGGAAAGGTCTTCACTGTCTGTTCTaGTTTGTCCACCACCAACTTAGAATTTCTTTCTTCATTCTCTGT +
Preference number: 5 (lower is better)
Translates to: FQTNSWQWKGLHCLF*FVHHQLRISFFILC
Trigger: ACAGAGAATGAAGAAAGAAATTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGGTTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAGGAGGATGCTAGTTTaGTGGGTGCTTCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFRRMLV*WVLLPD
Trigger: ATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp AAGCTATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGACAAAGAAGGTTCTATaGAGCCAACCAGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: KLSLNATTTLRCYRAIQWTKKVL*SQPVKT
Trigger: CGTCTTTACTGGTTGGCTCAATAGAACCTTCTTTGT...CCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp CCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACTCAATTTTGTCCAATTaGAGATCACCAGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: PLMLPLHLGVTGQFSGQHSILSN*RSPEVV
Trigger: AACTACCTCTGGTGATCTCAAATTGGACAAAATTGA...GTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp ATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTAATGCTACCACTACAGGTAAGTCCTTTCTCTaGTTTCTCCATGACTTGGAT +
Preference number: 5 (lower is better)
Translates to: MLLITLRAEKLSLNATTTGKSFL*FLHDLD
Trigger: ATCCAAGTCATGGAGAAACAAGAGAAAGGACTTACC...TGTAGTGGTAGCATTAAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTCTGGGGACTGATAAGTaGTGGCTTCTGGGTCATTGC +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFLGTDK*WLLGHC
Trigger: GCAATGACCCAGAAGCCACAACTTATCAGTCCCCAG...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp ACATCTTCAATTATTTTCCCAACCCAGGTGGCAGCAATGAGCAGACAAGGAAGCACCTTTGCCTTAAACTaGGCAATACAAGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: TSSIIFPTQVAAMSRQGSTFALN*AIQGRY
Trigger: ATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGT...GCTTCCTTGTCTGCTCATTGCTGCCACCTGGGTTGGGAAAATAATTGAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp CCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACAGTGGAGACTTTTTGTaGTTTCCTACTATATGTGAG +
Preference number: 5 (lower is better)
Translates to: PLMLPLHLGVTGQFSGQHSGDFL*FPTICE
Trigger: CTCACATATAGTAGGAAACAACAAAAAGTCTCCACT...GTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp CCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAACACGTCAGTGGAGACTTTTaGTTGTTTCCTACTATATGT +
Preference number: 5 (lower is better)
Translates to: PLMLPLHLGVTGQFSGQHVSGDF*LFPTIC
Trigger: ACATATAGTAGGAAACAACAAAAAGTCTCCACTGAC...GTGTTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp CAGGATCTCACCTTTGCCTTAAACTTGGCAATACAAGGCAGATATCCTTTTAGGGCATTTGTATGCACCTaGCAGGAAGATTCGGGAATT +
Preference number: 5 (lower is better)
Translates to: QDLTFALNLAIQGRYPFRAFVCT*QEDSGI
Trigger: AATTCCCGAATCTTCCTGCAAGGTGCATACAAATGC...CCTAAAAGGATATCTGCCTTGTATTGCCAAGTTTAAGGCAAAGGTGAGATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS CCA 90 bp ATCTTTGATTGGTCCTTTCATCTTTTTAGCACGTGGGAGTGTAGCTaGCTTGGACTGATAAACTTTTTGATCAGTAGGTATGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: IFDWSFHLFSTWECS*LGLINFLISRYGWS
Trigger: GGACCAACCATACCTACTGATCAAAAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGTGCTAAAAAGATGAAAGGACCAATCAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS-3UTR CAA 90 bp TATCCCTTAATGCTACCACTACACTTAGGTGTTACAGGGCAATTCAGTGGGCAAGGACTGATAAACTTTTaGATCAGTAGGTATGGTTGG +
Preference number: 5 (lower is better)
Translates to: YPLMLPLHLGVTGQFSGQGLINF*ISRYGW
Trigger: CCAACCATACCTACTGATCAAAAAGTTTATCAGTCC...TTGCCCACTGAATTGCCCTGTAACACCTAAGTGTAGTGGTAGCATTAAGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000577615.5
CDS-3UTR CAA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGTCAATTTTGTCCAATTaGAGATCACCAGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKSILSN*RSPEVV
Trigger: AACTACCTCTGGTGATCTCAAATTGGACAAAATTGA...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACTGAATCCCTGGTGTaGAAGTTCTCACAGCCATGG +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTESLV*KFSQPW
Trigger: CCATGGCTGTGAGAACTTCAACACCAGGGATTCAGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTATGTGGTCTTTCCCCTaGAGACTCCTTTCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFMWSFP*RLLSCD
Trigger: GTCACAGGAAAGGAGTCTCAAGGGGAAAGACCACAT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTCCTTATGGTGGTGTaGCACCTGATCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFFLMVV*HLIQPC
Trigger: ACAAGGCTGGATCAGGTGCAACACCACCATAAGGAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCCACTGTACGCCCTTaGCTGTTCCAGAGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSTVRP*LFQSFK
Trigger: CTTAAAGCTCTGGAACAGCAAAGGGCGTACAGTGGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp TCCAATGGCTTCTTGAAAGTTATCCACACTACTGTATTGTGGATTCTCAGTATCATGCTCCTGATAACCTaGAGGGCTGAAAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: SNGFLKVIHTTVLWILSIMLLIT*RAEKLS
Trigger: GGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCAT...GATACTGAGAATCCACAATACAGTAGTGTGGATAACTTTCAAGAAGCCATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp AATGTATCCTCACGAGGCAACTTTACATCAGTATTGCACCCTGGAGCTGTGAAGAGTGGAGACTTTTTGTaGTTTCCTACTATATGTGAG +
Preference number: 5 (lower is better)
Translates to: NVSSRGNFTSVLHPGAVKSGDFL*FPTICE
Trigger: CTCACATATAGTAGGAAACAACAAAAAGTCTCCACT...CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTTGCCTCGTGAGGATACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp GAAGCTTTTAATCTGGTGATCACATACATGATTGGAACTGGCTGTGCAAATGAAATTCTCACGCTGCATTaGTATGCACCTTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: EAFNLVITYMIGTGCANEILTLH*YAPCRK
Trigger: CTTCCTGCAAGGTGCATACAAATGCAGCGTGAGAAT...TTCATTTGCACAGCCAGTTCCAATCATGTATGTGATCACCAGATTAAAAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTTCTCTGCATTTCCTTaGCTCCCACACGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFFSAFP*LPHVST
Trigger: AGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGAA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp ATAGCAGTGATACAAATGCTCCTGATAACCTTGAGGGCTGAAAAGCTATCCCTTGTTTCCAATGGCTTCTaGAAAGTTATCCACACTACT +
Preference number: 5 (lower is better)
Translates to: IAVIQMLLITLRAEKLSLVSNGF*KVIHTT
Trigger: AGTAGTGTGGATAACTTTCAAGAAGCCATTGGAAAC...AAGGGATAGCTTTTCAGCCCTCAAGGTTATCAGGAGCATTTGTATCACTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp GATAGGAATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACAACTTTACATCAGTATaGCACCCTGGAGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: DRNFAYMSEKCILTRQLYNFTSV*HPGAVK
Trigger: CTTCACAGCTCCAGGGTGCAATACTGATGTAAAGTT...GTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACTGTCTGTTCTGGTTaGTCCACCACCAACTTAGAA +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTVCSG*STTNLE
Trigger: TTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp GATAGGAATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACGGACTGATAAACTTTTaGATCAGTAGGTATGGTTGG +
Preference number: 5 (lower is better)
Translates to: DRNFAYMSEKCILTRQLYGLINF*ISRYGW
Trigger: CCAACCATACCTACTGATCAAAAAGTTTATCAGTCC...GTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACAAAGAAGGTTCTATaGAGCCAACCAGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTKKVL*SQPVKT
Trigger: CGTCTTTACTGGTTGGCTCAATAGAACCTTCTTTGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGGTAAGTCCTTTCTCTaGTTTCTCCATGACTTGGAT +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFGKSFL*FLHDLD
Trigger: ATCCAAGTCATGGAGAAACAAGAGAAAGGACTTACC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTACTGTTAAGTATGTATaGCAGTCGTCTCCACTGTAC +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFTVKYV*QSSPLY
Trigger: GTACAGTGGAGACGACTGCAATACATACTTAACAGT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTGGACTGATAAACTTTTaGATCAGTAGGTATGGTTGG +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFGLINF*ISRYGW
Trigger: CCAACCATACCTACTGATCAAAAAGTTTATCAGTCC...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS-3UTR CAA 90 bp GATAGGAATTTTGCATACATGAGCGAAAAATGTATCCTCACGAGGCAACTTTACTCAATTTTGTCCAATTaGAGATCACCAGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: DRNFAYMSEKCILTRQLYSILSN*RSPEVV
Trigger: AACTACCTCTGGTGATCTCAAATTGGACAAAATTGA...GTAAAGTTGCCTCGTGAGGATACATTTTTCGCTCATGTATGCAAAATTCCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TCCTTCCATTACTCTGTAGACATTTACAAGTCATCCCAGAATGTGGAGATGTTTGTCAGTGGAGACTTTTaGTTGTTTCCTACTATATGT +
Preference number: 5 (lower is better)
Translates to: SFHYSVDIYKSSQNVEMFVSGDF*LFPTIC
Trigger: ACATATAGTAGGAAACAACAAAAAGTCTCCACTGAC...AAACATCTCCACATTCTGGGATGACTTGTAAATGTCTACAGAGTAATGGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268942.12
ENST00000359042.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTAACTCCTTATATGAGTaGAGCTTCGTTCCAACAAAG +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFNSLYE*SFVPTK
Trigger: CTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTT...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426147.6
CDS-3UTR CAA 90 bp TACATTTTTAAACTGTTAAGTATGTATTGCAGTCGTCTCCACTGTACGCCCTTTTCAATTTTGTCCAATTaGAGATCACCAGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: YIFKLLSMYCSRLHCTPFSILSN*RSPEVV
Trigger: AACTACCTCTGGTGATCTCAAATTGGACAAAATTGA...AAAGGGCGTACAGTGGAGACGACTGCAATACATACTTAACAGTTTAAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255557.8
ENST00000426147.6
CDS CAA 90 bp TCCGAGCCCGCCTCTTCCCGTGGGCGGGGTTACCAGTCGGTGCGGTaGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGGTACCACGGC +
Preference number: 6 (lower is better)
Translates to: SEPASSRGRGYQSVR*GWCHCAAARGRYHG
Trigger: GCCGTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGGCGGGCTCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS GCA 72 bp CGGGGTTACCAGTCGGTGCGGTTGGGATGGTGCCACTaGGCAGCCGCGAGAGGGCGGTACCACGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: RGYQSVRLGWCH*AAARGRYHGGS
Trigger: GCTGCCGCCGTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS GCA 72 bp CGTGGGCGGGGTTACCAGTCGGTGCGGTTGGGATGGTaGCACTGCGCAGCCGCGAGAGGGCGGTACCACGGC +
Preference number: 6 (lower is better)
Translates to: RGRGYQSVRLGW*HCAAARGRYHG
Trigger: GCCGTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS CAA 72 bp GCCTCTTCCCGTGGGCGGGGTTACCAGTCGGTGCGGTaGGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGG +
Preference number: 6 (lower is better)
Translates to: ASSRGRGYQSVR*GWCHCAAARGR
Trigger: CCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS GCA 72 bp AGCCCGCCTCTTCCCGTGGGCGGGGTTACCAGTCGGTaGGGTTGGGATGGTGCCACTGCGCAGCCGCGAGAG +
Preference number: 6 (lower is better)
Translates to: SPPLPVGGVTSR*GWDGATAQPRE
Trigger: CTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGGCGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS CCA 72 bp TCCCGTGGGCGGGGTTACCAGTCGGTGCGGTTGGGATaGTGCCACTGCGCAGCCGCGAGAGGGCGGTACCAC +
Preference number: 6 (lower is better)
Translates to: SRGRGYQSVRLG*CHCAAARGRYH
Trigger: GTGGTACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS CCA 72 bp CCTCTTCCCGTGGGCGGGGTTACCAGTCGGTGCGGTTaGGATGGTGCCACTGCGCAGCCGCGAGAGGGCGGT +
Preference number: 6 (lower is better)
Translates to: PLPVGGVTSRCG*DGATAQPREGG
Trigger: ACCGCCCTCTCGCGGCTGCGCAGTGGCACCATCCCAACCGCACCGACTGGTAACCCCGCCCACGGGAAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255557.8
CDS CCA 72 bp CTGATTCTGCCAGCTGTTCTGATTCTGCGGAGTGGATaGGGTCGGCCCGGCAGCTCCTGGGTCAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: LILPAVLILRSG*GRPGSSWVRDS
Trigger: GCTGTCCCTGACCCAGGAGCTGCCGGGCCGACCCCATCCACTCCGCAGAATCAGAACAGCTGGCAGAATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS CCA 72 bp GCGGCAATCCCCAGTCGTCTTCGCCACACCAATGCATaGAGGTACTGTGCTCTTCCAGGGCAGGGGTCGGCA +
Preference number: 6 (lower is better)
Translates to: AAIPSRLRHTNA*RYCALPGQGSA
Trigger: TGCCGACCCCTGCCCTGGAAGAGCACAGTACCTCCATGCATTGGTGTGGCGAAGACGACTGGGGATTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000535032.7
ENST00000577615.5
ENST00000582793.1
CDS CCA 72 bp TCTCCGCTCAGGAGAGTCTCCCCCAGACTTAGAACGTaGGCCGCGGAAAACAAACCCGCCCTTGCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SPLRRVSPRLRT*AAENKPALASS
Trigger: GGAGCTTGCAAGGGCGGGTTTGTTTTCCGCGGCCCACGTTCTAAGTCTGGGGGAGACTCTCCTGAGCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS CAA 72 bp ATCCTATTCCCGAGCTCCTCCAGGAGGATGCTAGTTTaGTGGGTGCTTCTCCCGGATCCCCATGCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: ILFPSSSRRMLV*WVLLPDPHASP
Trigger: CGGGGAAGCATGGGGATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCTGGAGGAGCTCGGGAATAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS TCA 72 bp ATGCTTCCCCGATCACCGTTCCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCTCGTCAGGCCGTCTGCA +
Preference number: 6 (lower is better)
Translates to: MLPRSPFPSVAE*NVNVSLVRPSA
Trigger: TGCAGACGGCCTGACGAGGCTGACATTCACGTTTCATTCTGCCACACTCGGGAACGGTGATCGGGGAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585109.5
CDS CAA 72 bp ACAAAGAAACCGAGCTCCTCCAGGAGGATGCTAGTTTaGTGGGTGCTTCTCCCGGATCCCCATGCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: TKKPSSSRRMLV*WVLLPDPHASP
Trigger: CGGGGAAGCATGGGGATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCTGGAGGAGCTCGGTTTCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582793.1
CDS TCA 72 bp ATGCTTCCCCGATCACCGTTCCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCCTCCGTTGGCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: MLPRSPFPSVAE*NVNVSPPLAVN
Trigger: GTTCACAGCCAACGGAGGGCTGACATTCACGTTTCATTCTGCCACACTCGGGAACGGTGATCGGGGAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255557.8
ENST00000535032.7
ENST00000577615.5
CDS CAA 90 bp TTCGTTCCAACAAAGAAACCGAGCTCCTCCAGGAGGATGCTAGTTTaGTGGGTGCTTCTCCCGGATCCCCATGCTTCCCCGATCACCGTT +
Preference number: 6 (lower is better)
Translates to: FVPTKKPSSSRRMLV*WVLLPDPHASPITV
Trigger: AACGGTGATCGGGGAAGCATGGGGATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCTGGAGGAGCTCGGTTTCTTTGTTGGAACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582793.1
CDS TCA 72 bp ATGCTTCCCCGATCACCGTTCCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCTCGGAAGACCTGAAAGC +
Preference number: 6 (lower is better)
Translates to: MLPRSPFPSVAE*NVNVSLGRPES
Trigger: GCTTTCAGGTCTTCCGAGGCTGACATTCACGTTTCATTCTGCCACACTCGGGAACGGTGATCGGGGAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
CDS CAA 72 bp GTGATGCCACCGAATCCACTCTTCCTTATGGTGGTGTaGCACCTGATCCAGCCTTGTGAGAGTCTTTCCCCC +
Preference number: 6 (lower is better)
Translates to: VMPPNPLFLMVV*HLIQPCESLSP
Trigger: GGGGGAAAGACTCTCACAAGGCTGGATCAGGTGCAACACCACCATAAGGAAGAGTGGATTCGGTGGCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000577615.5
CDS TCA 72 bp ATGCTTCCCCGATCACCGTTCCCGAGTGTGGCAGAATaGAACGTGAATGTCAGCCTGTGTAGGACACGATCA +
Preference number: 6 (lower is better)
Translates to: MLPRSPFPSVAE*NVNVSLCRTRS
Trigger: TGATCGTGTCCTACACAGGCTGACATTCACGTTTCATTCTGCCACACTCGGGAACGGTGATCGGGGAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS CAA 72 bp ATGTCAGCCTGTGTAGGACACGATCAGACAGGTGACTaGGCAGCATGCACAGTGAGTAAACGCGGCACGATA +
Preference number: 6 (lower is better)
Translates to: MSACVGHDQTGD*AACTVSKRGTI
Trigger: TATCGTGCCGCGTTTACTCACTGTGCATGCTGCCAAGTCACCTGTCTGATCGTGTCCTACACAGGCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582391.1
CDS TCA 72 bp AAGTCCGGCAGGGGGTTCCAAACTCCTTATATGAGTTaGGCTTCGTTCCAACAAAGAAACCGAGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: KSGRGFQTPYMS*ASFQQRNRAPP
Trigger: TGGAGGAGCTCGGTTTCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGAACCCCCTGCCGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582793.1
CDS TCA 72 bp GTTGTAAGTCCGGCAGGGGGTTCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAACAAAGAAACCGAGCTC +
Preference number: 6 (lower is better)
Translates to: VVSPAGGSKLLI*VELRSNKETEL
Trigger: GAGCTCGGTTTCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGAACCCCCTGCCGGACTTACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582793.1
CDS TCA 72 bp GTTGTAAGTCCGGCAGGGGGTTCCAAACTCCTTATATaGGTTGAGCTTCGTTCCAACAAAGAAACTTGTGAG +
Preference number: 6 (lower is better)
Translates to: VVSPAGGSKLLI*VELRSNKETCE
Trigger: CTCACAAGTTTCTTTGTTGGAACGAAGCTCAACTCATATAAGGAGTTTGGAACCCCCTGCCGGACTTACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
CDS CAA 72 bp TTTTCTGTTGCAGACATACTTTTCTCTGCATTTCCTTaGCTCCCACACGTCTCTACTCCCAGGGTAAGTCCT +
Preference number: 6 (lower is better)
Translates to: FSVADILFSAFP*LPHVSTPRVSP
Trigger: AGGACTTACCCTGGGAGTAGAGACGTGTGGGAGCAAAGGAAATGCAGAGAAAAGTATGTCTGCAACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
CDS GCA 72 bp AAGTTCTCACAGCCATGGCTCATGACAGTCCGTTCCTaGTTTTCTGTTGCAGACATACTTTTCTCTGCATTT +
Preference number: 6 (lower is better)
Translates to: KFSQPWLMTVRS*FSVADILFSAF
Trigger: AAATGCAGAGAAAAGTATGTCTGCAACAGAAAAGCAGGAACGGACTGTCATGAGCCATGGCTGTGAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
CDS CCA 72 bp AACAGCTGGCAGTGGAAAGGTCTTCACTGTCTGTTCTaGTTTGTCCACCACCAACTTAGAATTTCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: NSWQWKGLHCLF*FVHHQLRISFF
Trigger: GAAGAAAGAAATTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAGACCTTTCCACTGCCAGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS CAA 72 bp GCTGGCAGTGGAAAGGTCTTCACTGTCTGTTCTGGTTaGTCCACCACCAACTTAGAATTTCTTTCTTCATTC +
Preference number: 6 (lower is better)
Translates to: AGSGKVFTVCSG*STTNLEFLSSF
Trigger: GAATGAAGAAAGAAATTCTAAGTTGGTGGTGGACAAACCAGAACAGACAGTGAAGACCTTTCCACTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS CAA 72 bp ACGTGGGAGTGTAGCTGGCTTGGACTGATAAACTTTTaGATCAGTAGGTATGGTTGGTCCTATCATCTTACA +
Preference number: 6 (lower is better)
Translates to: TWECSWLGLINF*ISRYGWSYHLT
Trigger: TGTAAGATGATAGGACCAACCATACCTACTGATCAAAAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS CAA 90 bp CTTTTTAGCACGTGGGAGTGTAGCTGGCTTGGACTGATAAACTTTTaGATCAGTAGGTATGGTTGGTCCTATCATCTTACAGTATGGCAA +
Preference number: 6 (lower is better)
Translates to: LFSTWECSWLGLINF*ISRYGWSYHLTVWQ
Trigger: TTGCCATACTGTAAGATGATAGGACCAACCATACCTACTGATCAAAAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGTGCTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5
CDS TCA 72 bp ATACAGAATGAAACTGGTAAGTCGTCTCCCTCGGAATaGACAAACTTAAATGTGGTCTTTCCCCTTGAGACT +
Preference number: 6 (lower is better)
Translates to: IQNETGKSSPSE*TNLNVVFPLET
Trigger: AGTCTCAAGGGGAAAGACCACATTTAAGTTTGTTCATTCCGAGGGAGACGACTTACCAGTTTCATTCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
CDS CCA 72 bp TGGTCCTTTCATCTTTTTAGCACGTGGGAGTGTAGCTaGCTTGGACTGATAAACTTTTTGATCAGTAGGTAT +
Preference number: 6 (lower is better)
Translates to: WSFHLFSTWECS*LGLINFLISRY
Trigger: ATACCTACTGATCAAAAAGTTTATCAGTCCAAGCCAGCTACACTCCCACGTGCTAAAAAGATGAAAGGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000255557.8
ENST00000268942.12
ENST00000359042.6
ENST00000426147.6
ENST00000535032.7
ENST00000577615.5
ENST00000582391.1
ENST00000585109.5