RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C17ORF78 (Homo sapiens)

Ensembl gene IDs: ENSG00000278505

Ensembl transcript IDs: ENST00000611038.4, ENST00000615133.2, ENST00000616425.2, ENST00000631822.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGCTCAGATAGGGGCATGAGGGTAACT +
Preference number: 1 (lower is better)
Translates to: RLRGWKGIHLDGCMK*ITEGCGSDRGMRVT
Trigger: AGTTACCCTCATGCCCCTATCTGAGCCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR TCA 90 bp AGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTaGAATTGGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTG +
Preference number: 1 (lower is better)
Translates to: RNWCLIVMSLLKIQV*NWQECAHINRERTV
Trigger: CACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR TCA 90 bp CTCTGGAATCTTTGTCCAAAAGGTATGCAACTCTCTATTAAAGTATaGTATAATATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAG +
Preference number: 1 (lower is better)
Translates to: LWNLCPKGMQLSIKV*YNIRATLGILDRQK
Trigger: CTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATATTATATCATACTTTAATAGAGAGTTGCATACCTTTTGGACAAAGATTCCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCCCCACTCTAAGCTATTaGGGGCCAGTGAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPPTLSY*GPVSVK
Trigger: CTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGG...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTACCCACTCTAAGCTATTaGGGGCCAGTGAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLPTLSY*GPVSVK
Trigger: CTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGG...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CCA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGATTGGGTTTGATGAATTaGCAGCATCTTGTCCAACCT +
Preference number: 2 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRLGLMN*QHLVQP
Trigger: AGGTTGGACAAGATGCTGCCAATTCATCAAACCCAA...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR CCA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTTTGGGTTTGATGAATTaGCAGCATCTTGTCCAACCT +
Preference number: 2 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVLGLMN*QHLVQP
Trigger: AGGTTGGACAAGATGCTGCCAATTCATCAAACCCAA...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR TCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMDGCMK*ITEGCG
Trigger: GCCACAACCTTCTGTAATTCACTTCATACATCCATC...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTACCCTTCAGCAGTGTGTaGATAGATACATGTAGTACC +
Preference number: 2 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLPFSSV*IDTCST
Trigger: GGTACTACATGTATCTATCCACACACTGCTGAAGGG...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTATCTCGTTTGAGGGGATaGAAAGGTATCCATTTAGAT +
Preference number: 2 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLSRLRG*KGIHLD
Trigger: ATCTAAATGGATACCTTTCCATCCCCTCAAACGAGA...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR CAA 90 bp AAGAGAGTAGTAAGGTCCATTCATAGTGCTTGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATGGAAAGGTATCCATTTAGATGGATG +
Preference number: 2 (lower is better)
Translates to: KRVVRSIHSACREYF*FSFEGMERYPFRWM
Trigger: CATCCATCTAAATGGATACCTTTCCATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCAAGCACTATGAATGGACCTTACTACTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATCTTGGGGATAACTTATaGGGAAGGCTTTTGGAATGC +
Preference number: 2 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHLGDNL*GRLLEC
Trigger: GCATTCCAAAAGCCTTCCTCATAAGTTATCCCCAAG...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR GCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTGGAAGGCTTTTGGAATaGGTAGGGTCAAGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIGRLLE*VGSSSL
Trigger: AAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR GCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCGGAAGGCTTTTGGAATaGGTAGGGTCAAGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSGRLLE*VGSSSL
Trigger: AAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATCTGAAGATACAAGTGTaGAATTGGCAAGAATGTGCC +
Preference number: 2 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHLKIQV*NWQECA
Trigger: GGCACATTCTTGCCAATTTCACACTTGTATCTTCAG...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCCTTTTTGTTCTCGTTTaGGGGGATGGAAAGGTATCC +
Preference number: 2 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSLFVLV*GDGKVS
Trigger: GGATACCTTTCCATCCCCTCAAACGAGAACAAAAAG...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIDGCMK*ITEGCG
Trigger: GCCACAACCTTCTGTAATTCACTTCATACATCCATC...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR TCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATGTATCATTCAGTCTTTaGGATAGAGCAGAACTTTTC +
Preference number: 2 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHVSFSL*DRAELF
Trigger: GAAAAGTTCTGCTCTATCTCAAAGACTGAATGATAC...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR CCA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATCAGAAGACTTCACTTaGGTACTAATGGTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLSEDFT*VLMVCS
Trigger: ACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR GCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTTCCATTCATAGTGCTTaGAGGGAATACTTTTTGTTC +
Preference number: 2 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSISIHSA*REYFLF
Trigger: GAACAAAAAGTATTCCCTGCAAGCACTATGAATGGA...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR GCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCTCCATTCATAGTGCTTaGAGGGAATACTTTTTGTTC +
Preference number: 2 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSSIHSA*REYFLF
Trigger: GAACAAAAAGTATTCCCTGCAAGCACTATGAATGGA...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGTCCCACTCTAAGCTATaGAGGGCCAGTGAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMSHSKL*RASECE
Trigger: TTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGA...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGTCTCTGCAGCTTTCTTaGGGTTTGATGAATTGGCAG +
Preference number: 3 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMSLQLS*GLMNWQ
Trigger: CTGCCAATTCATCAAACCCAAAGAAAGCTGCAGAGA...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR CAA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCACCAGGAATTGGTGTTaGATTGTAATGTCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPTRNWC*IVMSLL
Trigger: CAGCAGGGACATTACAATCAAACACCAATTCCTGGT...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCACACTAACAGCTGCCTaGTTTCTTAGAGGCTGTGTT +
Preference number: 3 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPTLTAA*FLRGCV
Trigger: AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGT...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR TCA 72 bp GGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGCTCAGATAGGGGCATG +
Preference number: 3 (lower is better)
Translates to: GWKGIHLDGCMK*ITEGCGSDRGM
Trigger: CATGCCCCTATCTGAGCCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR GCA 72 bp CTGTCAAAGAGAGTAGTAAGGTCCATTCATAGTGCTTaGAGGGAATACTTTTTGTTCTCGTTTGAGGGGATG +
Preference number: 3 (lower is better)
Translates to: LSKRVVRSIHSA*REYFLFSFEGM
Trigger: CATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCAAGCACTATGAATGGACCTTACTACTCTCTTTGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATATTTGGGTTTGATGAATaGGCAGCATCTTGTCCAACC +
Preference number: 3 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIFGFDE*AASCPT
Trigger: GGTTGGACAAGATGCTGCCAATTCATCAAACCCAAA...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR CAA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATTTGGGTTTGATGAATaGGCAGCATCTTGTCCAACC +
Preference number: 3 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLFGFDE*AASCPT
Trigger: GGTTGGACAAGATGCTGCCAATTCATCAAACCCAAA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR CAA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTTCTCTGCAGCTTTCTTaGGGTTTGATGAATTGGCAG +
Preference number: 3 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSISLQLS*GLMNWQ
Trigger: CTGCCAATTCATCAAACCCAAAGAAAGCTGCAGAGA...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR-3UTR CAA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCTGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATG +
Preference number: 3 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSCREYF*FSFEGM
Trigger: CATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCA...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATG +
Preference number: 3 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLCREYF*FSFEGM
Trigger: CATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTACACTAACAGCTGCCTaGTTTCTTAGAGGCTGTGTT +
Preference number: 3 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSITLTAA*FLRGCV
Trigger: AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGT...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR-3UTR CAA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTACTTTTTGTTCTCGTTaGAGGGGATGGAAAGGTATC +
Preference number: 3 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSITFCSR*RGWKGI
Trigger: GATACCTTTCCATCCCCTCAAACGAGAACAAAAAGT...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCGATGTGGGGATTAGGTaGCAGCTTGAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVDVGIR*QLEEAE
Trigger: CTCTGCCTCCTCAAGCTGTCACCTAATCCCCACATC...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCCACAACCACTGGCATTaGCACAGCTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVHNHWH*HSFLAP
Trigger: AGGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTG...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCCCCACTCTAAGCTATTaGGGGCCAGTGAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVPTLSY*GPVSVK
Trigger: CTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGG...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTTTCTTTGGGTTTGATGAATTGGCAGCATCTTGTCCAACCTTCTGGGGCTGAGCCAACCTTCTGGGGCTaGGAGTCAGGCTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: LSLGLMNWQHLVQPSGAEPTFWG*ESGLDS
Trigger: TGAATCCAAGCCTGACTCTCAGCCCCAGAAGGTTGG...CTCAGCCCCAGAAGGTTGGACAAGATGCTGCCAATTCATCAAACCCAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTCCAACCTTCTGGGGCTaGGAGTCAGGCTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVPTFWG*ESGLDS
Trigger: TGAATCCAAGCCTGACTCTCAGCCCCAGAAGGTTGG...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGACCCACTCTAAGCTATTaGGGGCCAGTGAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRPTLSY*GPVSVK
Trigger: CTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGG...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CTTTCTTTGGGTTTGATGAATTGGCAGCATCTTGTCCAACCTTCTGGGGCTGAGTCAGAGCCAAGGCACTaGAGGGTAGCTATAGTCCGG +
Preference number: 4 (lower is better)
Translates to: LSLGLMNWQHLVQPSGAESEPRH*RVAIVR
Trigger: CCGGACTATAGCTACCCTGCAGTGCCTTGGCTCTGA...CTCAGCCCCAGAAGGTTGGACAAGATGCTGCCAATTCATCAAACCCAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR CCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCATTGGCACAGCTTCCTaGCTCCTAGGCATTGATACT +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVIGTAS*LLGIDT
Trigger: AGTATCAATGCCTAGGAGCCAGGAAGCTGTGCCAAT...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
3UTR CAA 72 bp GTCAACCAGGGAGATCAGGAGTCCCACTCTAAGCTATaGAGGGCCAGTGAGTGTGAAGTCAGCTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VNQGDQESHSKL*RASECEVSCED
Trigger: ATCTTCACAGCTGACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTGGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCGTATCCATGTTAGCTTaGGCACATGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVVSMLA*AHAHCR
Trigger: TCTGCAATGAGCATGTGCTCAAGCTAACATGGATAC...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCAGAAGAGATCCAGTCTaGAACTTGGATGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVRRDPV*NLDVGI
Trigger: AATCCCCACATCCAAGTTTCAGACTGGATCTCTTCT...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCCCAACCTTCTGGGGCTaGGAGTCAGGCTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPPTFWG*ESGLDS
Trigger: TGAATCCAAGCCTGACTCTCAGCCCCAGAAGGTTGG...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTCATCTCCACAACCACTaGCATTGGCACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVHLHNH*HWHSFL
Trigger: CAGGAAGCTGTGCCAATGCCAGTGGTTGTGGAGATG...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGAGCTCTGCCTCTAGTTaGTTTCACCACACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMSSASS*FHHTQL
Trigger: CAGCTGCGTGTGGTGAAAGCAACTAGAGGCAGAGCT...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTCACAACCACTGGCATTaGCACAGCTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAHNHWH*HSFLAP
Trigger: AGGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTG...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTTCAGCTGTCCCAGGTaGCTGGCCTCCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAFSCPR*LASLLL
Trigger: CAAAAGAAGGGAGGCCAGCCACCTGGGACAGCTGAA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCGCTATAGTCCGGTTTTaGATGAATGTTGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QGDQESHSKLLRASECEVAIVRF*MNVVLL
Trigger: CAAAAGGACAACATTCATTCAAAACCGGACTATAGC...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGAAGAAGAGATCCAGTCTaGAACTTGGATGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRRRDPV*NLDVGI
Trigger: AATCCCCACATCCAAGTTTCAGACTGGATCTCTTCT...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAAGCTCTGCCTCTAGTTaGTTTCACCACACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLSSASS*FHHTQL
Trigger: CAGCTGCGTGTGGTGAAAGCAACTAGAGGCAGAGCT...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR GCA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTGGAAGGCTTTTGGAATaGGTAGGGTCAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVGRLLE*VGSSSL
Trigger: AAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAGCTTCTCACGTCTTTTaGGAAGATCCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLASHVF*EDPRQL
Trigger: CAGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGC...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGCTTCTCACGTCTTTTaGGAAGATCCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAASHVF*EDPRQL
Trigger: CAGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGC...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTCATCTCCACAACCACTaGCATTGGCACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAHLHNH*HWHSFL
Trigger: CAGGAAGCTGTGCCAATGCCAGTGGTTGTGGAGATG...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCGGCAACTGCTATCTCTaGGGTCTTTCTTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPGNCYL*GLSCWH
Trigger: ATGCCAACAAGAAAGACCTCAGAGATAGCAGTTGCC...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCTGCGGGGAGCAGCAATaGTTCTCAGGTTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPCGEQQ*FSGSSK
Trigger: TTTTGAAGAACCTGAGAATCATTGCTGCTCCCCGCA...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGAGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRDGCMK*ITEGCG
Trigger: GCCACAACCTTCTGTAATTCACTTCATACATCCATC...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTTTCTTTGGGTTTGATGAATTGGCAGCATCTTGTCCAACCTTCTGGGGCTGAGCTTTTTGTTCTCGTTTaGGGGGATGGAAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: LSLGLMNWQHLVQPSGAELFVLV*GDGKVS
Trigger: GGATACCTTTCCATCCCCTCAAACGAGAACAAAAAG...CTCAGCCCCAGAAGGTTGGACAAGATGCTGCCAATTCATCAAACCCAAAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR GCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTTGCAGACAGACCACTaGTCATCTGTCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPALQTDH*SSVTAL
Trigger: AAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR GCA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCGTTAGCTTGAGCACATaGTCATTGCAGACAGACCAC +
Preference number: 4 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPVSLST*SLQTDH
Trigger: GTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAAC...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTTAGCTTGAGCACATaGTCATTGCAGACAGACCAC +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMVSLST*SLQTDH
Trigger: GTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAAC...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAATGGCCTCCCTTCTTTTaGCATCTCCACAACCACTGG +
Preference number: 4 (lower is better)
Translates to: HSPFINQELVFDCNVPAEWPPFF*HLHNHW
Trigger: CCAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCA...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CTTTCTTTGGGTTTGATGAATTGGCAGCATCTTGTCCAACCTTCTGGGGCTGAGTCTGAAACTTGGATGTaGGGATTAGGTGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSLGLMNWQHLVQPSGAESETWM*GLGDSL
Trigger: CAAGCTGTCACCTAATCCCCACATCCAAGTTTCAGA...CTCAGCCCCAGAAGGTTGGACAAGATGCTGCCAATTCATCAAACCCAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR CCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACACAACCACTGGCATTaGCACAGCTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIHNHWH*HSFLAP
Trigger: AGGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTG...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGAGCTATAGTCCGGTTTTaGATGAATGTTGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRAIVRF*MNVVLL
Trigger: CAAAAGGACAACATTCATTCAAAACCGGACTATAGC...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGGATGTGGGGATTAGGTaGCAGCTTGAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVDVGIR*QLEEAE
Trigger: CTCTGCCTCCTCAAGCTGTCACCTAATCCCCACATC...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACCCACTCTAAGCTATTaGGGGCCAGTGAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIPTLSY*GPVSVK
Trigger: CTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGG...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGCTTGGGGATAACTTATaGGGAAGGCTTTTGGAATGC +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMLGDNL*GRLLEC
Trigger: GCATTCCAAAAGCCTTCCTCATAAGTTATCCCCAAG...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCATTGCAGACAGACCACTaGTCATCTGTCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPLQTDH*SSVTAL
Trigger: AAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAA...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAGTTAGCTTGAGCACATaGTCATTGCAGACAGACCAC +
Preference number: 4 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLVSLST*SLQTDH
Trigger: GTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAAC...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATATGGCCTCCCTTCTTTTaGCATCTCCACAACCACTGG +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIWPPFF*HLHNHW
Trigger: CCAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCA...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTATTGGCACAGCTTCCTaGCTCCTAGGCATTGATACT +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAIGTAS*LLGIDT
Trigger: AGTATCAATGCCTAGGAGCCAGGAAGCTGTGCCAAT...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR TCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAGATGTGGGGATTAGGTaGCAGCTTGAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRDVGIR*QLEEAE
Trigger: CTCTGCCTCCTCAAGCTGTCACCTAATCCCCACATC...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGATTTTCACCTCAACATTaGTTCAAGATCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRFSPQH*FKIRWF
Trigger: AAACCACCTGATCTTGAATCAATGTTGAGGTGAAAA...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATCAGAGCCAAGGCACTaGAGGGTAGCTATAGTCCGG +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRSEPRH*RVAIVR
Trigger: CCGGACTATAGCTACCCTGCAGTGCCTTGGCTCTGA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATTCAGAGCCAAGGCACTaGAGGGTAGCTATAGTCCGG +
Preference number: 4 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHSEPRH*RVAIVR
Trigger: CCGGACTATAGCTACCCTGCAGTGCCTTGGCTCTGA...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTGGCCTCCCTTCTTTTaGCATCTCCACAACCACTGG +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVWPPFF*HLHNHW
Trigger: CCAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCA...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTCTGAAACTTGGATGTaGGGATTAGGTGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPASETWM*GLGDSL
Trigger: CAAGCTGTCACCTAATCCCCACATCCAAGTTTCAGA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGCACAACCACTGGCATTaGCACAGCTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWHNHWH*HSFLAP
Trigger: AGGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTG...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGTTGGGTTTGATGAATTaGCAGCATCTTGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMLGLMN*QHLVQP
Trigger: AGGTTGGACAAGATGCTGCCAATTCATCAAACCCAA...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCAGTATCCATGTTAGCTTaGGCACATGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPVSMLA*AHAHCR
Trigger: TCTGCAATGAGCATGTGCTCAAGCTAACATGGATAC...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTCCAAATATACAAGGTTaGCTTTTACTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVPNIQG*LLLCCQ
Trigger: CTGACAGCAAAGTAAAAGTCAACCTTGTATATTTGG...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCGATGTGGGGATTAGGTaGCAGCTTGAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSDVGIR*QLEEAE
Trigger: CTCTGCCTCCTCAAGCTGTCACCTAATCCCCACATC...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCAAGAAGAGATCCAGTCTaGAACTTGGATGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPRRDPV*NLDVGI
Trigger: AATCCCCACATCCAAGTTTCAGACTGGATCTCTTCT...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTCCAACCTTCTGGGGCTaGGAGTCAGGCTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIPTFWG*ESGLDS
Trigger: TGAATCCAAGCCTGACTCTCAGCCCCAGAAGGTTGG...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTCTGAAGATACAAGTGTaGAATTGGCAAGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPALKIQV*NWQECA
Trigger: GGCACATTCTTGCCAATTTCACACTTGTATCTTCAG...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTTTTTCACCTCAACATTaGTTCAAGATCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVFSPQH*FKIRWF
Trigger: AAACCACCTGATCTTGAATCAATGTTGAGGTGAAAA...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTTGCAGACAGACCACTaGTCATCTGTCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVLQTDH*SSVTAL
Trigger: AAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAA...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR GCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCTCAGAGCCAAGGCACTaGAGGGTAGCTATAGTCCGG +
Preference number: 4 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSSEPRH*RVAIVR
Trigger: CCGGACTATAGCTACCCTGCAGTGCCTTGGCTCTGA...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGAGGTTCTTCAAAATATaGTTGACCTTTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMRFFKI*LTFGLL
Trigger: GAGAAGGCCAAAGGTCAAGCATATTTTGAAGAACCT...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATTCAGCTGTCCCAGGTaGCTGGCCTCCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLFSCPR*LASLLL
Trigger: CAAAAGAAGGGAGGCCAGCCACCTGGGACAGCTGAA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTTTCAGCTGTCCCAGGTaGCTGGCCTCCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIFSCPR*LASLLL
Trigger: CAAAAGAAGGGAGGCCAGCCACCTGGGACAGCTGAA...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTTGGGTTTGATGAATTaGCAGCATCTTGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPALGLMN*QHLVQP
Trigger: AGGTTGGACAAGATGCTGCCAATTCATCAAACCCAA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGTCTCGTTTGAGGGGATaGAAAGGTATCCATTTAGAT +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMSRLRG*KGIHLD
Trigger: ATCTAAATGGATACCTTTCCATCCCCTCAAACGAGA...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp GGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTGTAGTATCATTCAGTCTCCCTTCAGCAGTGTGTaGATAGATACATGTAGTACC +
Preference number: 4 (lower is better)
Translates to: GKNVPILIGRGLCSIIQSPFSSV*IDTCST
Trigger: GGTACTACATGTATCTATCCACACACTGCTGAAGGG...AGACTGAATGATACTACACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCACCCTTCAGCAGTGTGTaGATAGATACATGTAGTACC +
Preference number: 4 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPPFSSV*IDTCST
Trigger: GGTACTACATGTATCTATCCACACACTGCTGAAGGG...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATAATTGGCACAGCTTCCTaGCTCCTAGGCATTGATAAG +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIIGTAS*LLGIDK
Trigger: CTTATCAATGCCTAGGAGCCAGGAAGCTGTGCCAAT...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615133.2
ENST00000616425.2
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATAGTATCCATGTTAGCTTaGGCACATGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIVSMLA*AHAHCR
Trigger: TCTGCAATGAGCATGTGCTCAAGCTAACATGGATAC...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGCTATAGTCCGGTTTTaGATGAATGTTGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAAIVRF*MNVVLL
Trigger: CAAAAGGACAACATTCATTCAAAACCGGACTATAGC...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGCCAAATATACAAGGTTaGCTTTTACTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMPNIQG*LLLCCQ
Trigger: CTGACAGCAAAGTAAAAGTCAACCTTGTATATTTGG...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACTTTTTGTTCTCGTTTaGGGGGATGGAAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKILFVLV*GDGKVS
Trigger: GGATACCTTTCCATCCCCTCAAACGAGAACAAAAAG...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTACCCACTCTAAGCTATTaGGGGCCAGTGAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLPTLSY*GPVSVK
Trigger: CTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGG...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGTTTTCACCTCAACATTaGTTCAAGATCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMFSPQH*FKIRWF
Trigger: AAACCACCTGATCTTGAATCAATGTTGAGGTGAAAA...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGGTTAGCTTGAGCACATaGTCATTGCAGACAGACCAC +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVVSLST*SLQTDH
Trigger: GTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAAC...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTAGGTTCTTCAAAATATaGTTGACCTTTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPARFFKI*LTFGLL
Trigger: GAGAAGGCCAAAGGTCAAGCATATTTTGAAGAACCT...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTTGGCCTCCCTTCTTTTaGCATCTCCACAACCACTGG +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIWPPFF*HLHNHW
Trigger: CCAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCA...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGGGAAGGCTTTTGGAATaGGTAGGGTCAAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVGRLLE*VGSSSL
Trigger: AAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTGCTTCTCACGTCTTTTaGGAAGATCCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIASHVF*EDPRQL
Trigger: CAGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGC...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATAATCCAGTCTGAAACTTaGATGTGGGGATTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIIQSET*MWGLGD
Trigger: GTCACCTAATCCCCACATCCAAGTTTCAGACTGGAT...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCCATCTCCACAACCACTaGCATTGGCACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSHLHNH*HWHSFL
Trigger: CAGGAAGCTGTGCCAATGCCAGTGGTTGTGGAGATG...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTCATCTCCACAACCACTaGCATTGGCACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIHLHNH*HWHSFL
Trigger: CAGGAAGCTGTGCCAATGCCAGTGGTTGTGGAGATG...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTCTCGTTTGAGGGGATaGAAAGGTATCCATTTAGAT +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPASRLRG*KGIHLD
Trigger: ATCTAAATGGATACCTTTCCATCCCCTCAAACGAGA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGATTGGCACAGCTTCCTaGCTCCTAGGCATTGATAAG +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVIGTAS*LLGIDK
Trigger: CTTATCAATGCCTAGGAGCCAGGAAGCTGTGCCAAT...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615133.2
ENST00000616425.2
3UTR CAA 72 bp GTAAGGTCCATTCATAGTGCTTGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATGGAAAGGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: VRSIHSACREYF*FSFEGMERYPF
Trigger: AAATGGATACCTTTCCATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCAAGCACTATGAATGGACCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGGTATCCATGTTAGCTTaGGCACATGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVVSMLA*AHAHCR
Trigger: TCTGCAATGAGCATGTGCTCAAGCTAACATGGATAC...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTCCAAATATACAAGGTTaGCTTTTACTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAPNIQG*LLLCCQ
Trigger: CTGACAGCAAAGTAAAAGTCAACCTTGTATATTTGG...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATGCGGGGAGCAGCAATaGTTCTCAGGTTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRCGEQQ*FSGSSK
Trigger: TTTTGAAGAACCTGAGAATCATTGCTGCTCCCCGCA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGTGCGGGGAGCAGCAATaGTTCTCAGGTTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWCGEQQ*FSGSSK
Trigger: TTTTGAAGAACCTGAGAATCATTGCTGCTCCCCGCA...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAGTATCATTCAGTCTTTaGGATAGAGCAGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLVSFSL*DRAELF
Trigger: GAAAAGTTCTGCTCTATCTCAAAGACTGAATGATAC...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACTGAAGATACAAGTGTaGAATTGGCAAGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKILKIQV*NWQECA
Trigger: GGCACATTCTTGCCAATTTCACACTTGTATCTTCAG...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATAGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIDGCMK*ITEGCG
Trigger: GCCACAACCTTCTGTAATTCACTTCATACATCCATC...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGCTTGGGGATAACTTATaGGGAAGGCTTTTGGAATGC +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVLGDNL*GRLLEC
Trigger: GCATTCCAAAAGCCTTCCTCATAAGTTATCCCCAAG...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTCAGCAATCAGAATTTTaGCCACAATACTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPAQQSEF*PQYSIS
Trigger: AGAAATGGAGTATTGTGGTCAAAATTCTGATTGCTG...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615133.2
ENST00000616425.2
CDS-3UTR GCA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAAGGTTCTTCAAAATATaGTTGACCTTTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSPFINQELVFDCNVPAERFFKI*LTFGLL
Trigger: GAGAAGGCCAAAGGTCAAGCATATTTTGAAGAACCT...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTCCATTCATAGTGCTTaGAGGGAATACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: PHSPFINQELVFDCNVPASIHSA*REYFLF
Trigger: GAACAAAAAGTATTCCCTGCAAGCACTATGAATGGA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTCTGAAACTTGGATGTaGGGATTAGGTGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVSETWM*GLGDSL
Trigger: CAAGCTGTCACCTAATCCCCACATCCAAGTTTCAGA...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAATCAGAAGACTTCACTTaGGTACTAATGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: HSPFINQELVFDCNVPAESEDFT*VLMVCS
Trigger: ACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGA...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATAGCTATAGTCCGGTTTTaGATGAATGTTGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIAIVRF*MNVVLL
Trigger: CAAAAGGACAACATTCATTCAAAACCGGACTATAGC...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCACCAAATATACAAGGTTaGCTTTTACTTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPPNIQG*LLLCCQ
Trigger: CTGACAGCAAAGTAAAAGTCAACCTTGTATATTTGG...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATGCGGGGAGCAGCAATaGTTCTCAGGTTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLCGEQQ*FSGSSK
Trigger: TTTTGAAGAACCTGAGAATCATTGCTGCTCCCCGCA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATAGAAGAGATCCAGTCTaGAACTTGGATGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHRRDPV*NLDVGI
Trigger: AATCCCCACATCCAAGTTTCAGACTGGATCTCTTCT...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGCTGAAGATACAAGTGTaGAATTGGCAAGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVLKIQV*NWQECA
Trigger: GGCACATTCTTGCCAATTTCACACTTGTATCTTCAG...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGCTTTTTGTTCTCGTTTaGGGGGATGGAAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWLFVLV*GDGKVS
Trigger: GGATACCTTTCCATCCCCTCAAACGAGAACAAAAAG...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGACTTGGGGATAACTTATaGGGAAGGCTTTTGGAATGC +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRLGDNL*GRLLEC
Trigger: GCATTCCAAAAGCCTTCCTCATAAGTTATCCCCAAG...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCACAGCAATCAGAATTTTaGCCACAATACTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPQQSEF*PQYSIS
Trigger: AGAAATGGAGTATTGTGGTCAAAATTCTGATTGCTG...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615133.2
ENST00000616425.2
CDS-3UTR GCA 90 bp GGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTGTAGTATCATTCAGTCTTCCATTCATAGTGCTTaGAGGGAATACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKNVPILIGRGLCSIIQSSIHSA*REYFLF
Trigger: GAACAAAAAGTATTCCCTGCAAGCACTATGAATGGA...AGACTGAATGATACTACACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGATCCAGTCTGAAACTTaGATGTGGGGATTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWIQSET*MWGLGD
Trigger: GTCACCTAATCCCCACATCCAAGTTTCAGACTGGAT...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATATCCAGTCTGAAACTTaGATGTGGGGATTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHIQSET*MWGLGD
Trigger: GTCACCTAATCCCCACATCCAAGTTTCAGACTGGAT...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGCCCTTCAGCAGTGTGTaGATAGATACATGTAGTACC +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWPFSSV*IDTCST
Trigger: GGTACTACATGTATCTATCCACACACTGCTGAAGGG...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR CAA 72 bp TTCATAGTGCTTGCAGGGAATACTTTTTGTTCTCGTTaGAGGGGATGGAAAGGTATCCATTTAGATGGATGT +
Preference number: 4 (lower is better)
Translates to: FIVLAGNTFCSR*RGWKGIHLDGC
Trigger: ACATCCATCTAAATGGATACCTTTCCATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCAAGCACTATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATGATGGATGTATGAAGTaGATTACAGAAGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHDGCMK*ITEGCG
Trigger: GCCACAACCTTCTGTAATTCACTTCATACATCCATC...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTCTTTTTGTTCTCGTTTaGGGGGATGGAAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSILFVLV*GDGKVS
Trigger: GGATACCTTTCCATCCCCTCAAACGAGAACAAAAAG...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTCTTGGGGATAACTTATaGGGAAGGCTTTTGGAATGC +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSILGDNL*GRLLEC
Trigger: GCATTCCAAAAGCCTTCCTCATAAGTTATCCCCAAG...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATATTTTCACCTCAACATTaGTTCAAGATCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIFSPQH*FKIRWF
Trigger: AAACCACCTGATCTTGAATCAATGTTGAGGTGAAAA...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCTCTGAAACTTGGATGTaGGGATTAGGTGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSSETWM*GLGDSL
Trigger: CAAGCTGTCACCTAATCCCCACATCCAAGTTTCAGA...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCATCCAGTCTGAAACTTaGATGTGGGGATTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSIQSET*MWGLGD
Trigger: GTCACCTAATCCCCACATCCAAGTTTCAGACTGGAT...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGTTGGGTTTGATGAATTaGCAGCATCTTGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWLGLMN*QHLVQP
Trigger: AGGTTGGACAAGATGCTGCCAATTCATCAAACCCAA...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATTGGGTTTGATGAATTaGCAGCATCTTGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRLGLMN*QHLVQP
Trigger: AGGTTGGACAAGATGCTGCCAATTCATCAAACCCAA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTACCCTTCAGCAGTGTGTaGATAGATACATGTAGTACC +
Preference number: 4 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLPFSSV*IDTCST
Trigger: GGTACTACATGTATCTATCCACACACTGCTGAAGGG...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGAATATGCTTGACCTTTaGCCTTCTCTCCAAATATAC +
Preference number: 4 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVNMLDL*PSLQIY
Trigger: GTATATTTGGAGAGAAGGCCAAAGGTCAAGCATATT...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATCAGAAGACTTCACTTaGGTACTAATGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRSEDFT*VLMVCS
Trigger: ACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGGTATCATTCAGTCTTTaGGATAGAGCAGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWVSFSL*DRAELF
Trigger: GAAAAGTTCTGCTCTATCTCAAAGACTGAATGATAC...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR TCA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAGTATCATTCAGTCTTTaGGATAGAGCAGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRVSFSL*DRAELF
Trigger: GAAAAGTTCTGCTCTATCTCAAAGACTGAATGATAC...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR GCA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATTCCATTCATAGTGCTTaGAGGGAATACTTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHSIHSA*REYFLF
Trigger: GAACAAAAAGTATTCCCTGCAAGCACTATGAATGGA...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCTCTCGTTTGAGGGGATaGAAAGGTATCCATTTAGAT +
Preference number: 4 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSSRLRG*KGIHLD
Trigger: ATCTAAATGGATACCTTTCCATCCCCTCAAACGAGA...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTTCAGAAGACTTCACTTaGGTACTAATGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSISEDFT*VLMVCS
Trigger: ACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGA...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CCA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAATATGCTTGACCTTTaGCCTTCTCTCCAAATATAC +
Preference number: 4 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLNMLDL*PSLQIY
Trigger: GTATATTTGGAGAGAAGGCCAAAGGTCAAGCATATT...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
3UTR CAA 72 bp ACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTaGACTCATAGCTATTCTCCTGTGAGAAACAGCATT +
Preference number: 4 (lower is better)
Translates to: TFSPNSYLSRLD*THSYSPVRNSI
Trigger: AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGCCACAACCACTGGCATaGGCACAGCTTCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMPQPLA*AQLPGS
Trigger: GGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTGG...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGACATCTGTCACAGCCCTaGATAGCTCTGCCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRHLSQP*IALPLV
Trigger: AACTAGAGGCAGAGCTATCAAGGGCTGTGACAGATG...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTTTCTTTGGGTTTGATGAATTGGCAGCATCTTGTCCAACCTTCTGGGGCTGAGGGATTAGGTGACAGCTaGAGGAGGCAGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LSLGLMNWQHLVQPSGAEGLGDS*RRQSCF
Trigger: GAAACAGCTCTGCCTCCTCAAGCTGTCACCTAATCC...CTCAGCCCCAGAAGGTTGGACAAGATGCTGCCAATTCATCAAACCCAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR CAA 90 bp GGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTGTAGTATCATTCAGTCTCCACAACCACTGGCATaGGCACAGCTTCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GKNVPILIGRGLCSIIQSPQPLA*AQLPGS
Trigger: GGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTGG...AGACTGAATGATACTACACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCTGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: QGDQESHSKLLRASECEVCREYF*FSFEGM
Trigger: CATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCA...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS GCA 90 bp GGTATCCATGTTAGCTTGAGCACATGCTCATTGCAGACAGACCACTaGTCATCTGTCACAGCCCTTGATAGCTCTGCCTCTAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: GIHVSLSTCSLQTDH*SSVTALDSSASSCF
Trigger: AAAGCAACTAGAGGCAGAGCTATCAAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAACATGGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGAGGTATCCATGTTAGCTaGAGCACATGCTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRGIHVS*STCSLQ
Trigger: CTGCAATGAGCATGTGCTCAAGCTAACATGGATACC...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCTGCTTCTCACGTCTTTaGGGAAGATCCCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPCFSRL*GRSQAA
Trigger: AGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGCA...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGAAGGTTGACTTTTACTTaGCTGTCAGAGCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRRLTFT*LSEPRH
Trigger: GTGCCTTGGCTCTGACAGCAAAGTAAAAGTCAACCT...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTACTGGCCTCCCTTCTTTaGCCATCTCCACAACCACTG +
Preference number: 5 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLLASLL*PSPQPL
Trigger: CAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCAG...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS CCA 90 bp GTGAGTTTCTTGCATTTGCAATTCTCTGATGCTTCTCACGTCTTTTaGGAAGATCCCAGGCAGCTGTTCCAGTCGGCAACTGCTATCTCT +
Preference number: 5 (lower is better)
Translates to: VSFLHLQFSDASHVF*EDPRQLFQSATAIS
Trigger: AGAGATAGCAGTTGCCGACTGGAACAGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGCATCAGAGAATTGCAAATGCAAGAAACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCCATCTGTCACAGCCCTaGATAGCTCTGCCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPHLSQP*IALPLV
Trigger: AACTAGAGGCAGAGCTATCAAGGGCTGTGACAGATG...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTAGGTTGACTTTTACTTaGCTGTCAGAGCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVRLTFT*LSEPRH
Trigger: GTGCCTTGGCTCTGACAGCAAAGTAAAAGTCAACCT...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGGATTAGGTGACAGCTaGAGGAGGCAGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: PHSPFINQELVFDCNVPAGLGDS*RRQSCF
Trigger: GAAACAGCTCTGCCTCCTCAAGCTGTCACCTAATCC...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS TCA 90 bp GATGCAATGATTAGGCTGAAGACCAAGATGGTATCCATGTTAGCTTaGGCACATGCTCATTGCAGACAGACCACTGCTCATCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: DAMIRLKTKMVSMLA*AHAHCRQTTAHLSQ
Trigger: CTGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAACATGGATACCATCTTGGTCTTCAGCCTAATCATTGCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAATGCTTCTCACGTCTTTaGGGAAGATCCCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: HSPFINQELVFDCNVPAECFSRL*GRSQAA
Trigger: AGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGCA...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CAGGGAGATCAGGAGTCCCACTCTAAGCTATTGAGGGCCAGTGAGTGTGAAGTCTTCTGTGTGAGTTTCTaGCATTTGCAATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: QGDQESHSKLLRASECEVFCVSF*HLQFSD
Trigger: ATCAGAGAATTGCAAATGCAAGAAACTCACACAGAA...GACTTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGACTCCTGATCTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATCCACAACCACTGGCATaGGCACAGCTTCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHPQPLA*AQLPGS
Trigger: GGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTGG...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGCCACAACCACTGGCATaGGCACAGCTTCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWPQPLA*AQLPGS
Trigger: GGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTGG...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTAGGTTGACTTTTACTTaGCTGTCAGAGCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PHSPFINQELVFDCNVPARLTFT*LSEPRH
Trigger: GTGCCTTGGCTCTGACAGCAAAGTAAAAGTCAACCT...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGACTAGGCATTGATACTTaGCCTTTTAGAAGAGATCCA +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRLGIDT*PFRRDP
Trigger: TGGATCTCTTCTAAAAGGCAAAGTATCAATGCCTAG...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR CAA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGCTGGCCTCCCTTCTTTaGCCATCTCCACAACCACTG +
Preference number: 5 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVLASLL*PSPQPL
Trigger: CAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCAG...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGACCAGGAATTGGTGTTaGATTGTAATGTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMTRNWC*IVMSLL
Trigger: CAGCAGGGACATTACAATCAAACACCAATTCCTGGT...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTTTCTTTGGGTTTGATGAATTGGCAGCATCTTGTCCAACCTTCTGGGGCTGAGACTTTTTGTTCTCGTTaGAGGGGATGGAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: LSLGLMNWQHLVQPSGAETFCSR*RGWKGI
Trigger: GATACCTTTCCATCCCCTCAAACGAGAACAAAAAGT...CTCAGCCCCAGAAGGTTGGACAAGATGCTGCCAATTCATCAAACCCAAAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTACTTTTTGTTCTCGTTaGAGGGGATGGAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVTFCSR*RGWKGI
Trigger: GATACCTTTCCATCCCCTCAAACGAGAACAAAAAGT...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCTGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPCREYF*FSFEGM
Trigger: CATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCA...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGACACTAACAGCTGCCTaGTTTCTTAGAGGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMTLTAA*FLRGCV
Trigger: AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGT...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCATCCCACTCTAAGCTATaGAGGGCCAGTGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPSHSKL*RASECE
Trigger: TTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGA...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTGTAGTATCATTCAGTCTTCCCACTCTAAGCTATaGAGGGCCAGTGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: GKNVPILIGRGLCSIIQSSHSKL*RASECE
Trigger: TTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGA...AGACTGAATGATACTACACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATATTGAGCACATGCTCATaGCAGACAGACCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKILSTCS*QTDHCS
Trigger: TGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAA...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGATTCTGTGTGAGTTTCTaGCATTTGCAATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRFCVSF*HLQFSD
Trigger: ATCAGAGAATTGCAAATGCAAGAAACTCACACAGAA...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGTTCTTCAAAATATGCTaGACCTTTGGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: QSHLRNSGSSEDFTWVLMFFKIC*TFGLLS
Trigger: GGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAA...CATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGACTGGCCTCCCTTCTTTaGCCATCTCCACAACCACTG +
Preference number: 5 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRLASLL*PSPQPL
Trigger: CAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCAG...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTATTTGGGTTTGATGAATaGGCAGCATCTTGTCCAACC +
Preference number: 5 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLFGFDE*AASCPT
Trigger: GGTTGGACAAGATGCTGCCAATTCATCAAACCCAAA...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAACCAGGAATTGGTGTTaGATTGTAATGTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLTRNWC*IVMSLL
Trigger: CAGCAGGGACATTACAATCAAACACCAATTCCTGGT...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGATTAAGCAGGTTAGATTaGACTCATAGCTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRLSRLD*THSYSP
Trigger: AGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAA...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAAGGCTTTTGGAATGCGTAGGGTCAAGTTCCCTTCAGCAGTGTGTGGATAGATTTTTCACCTCAACATaGATTCAAGATCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GRLLECVGSSSLQQCVDRFFTST*IQDQVV
Trigger: AACCACCTGATCTTGAATCAATGTTGAGGTGAAAAA...TCTATCCACACACTGCTGAAGGGAACTTGACCCTACGCATTCCAAAAGCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp AGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTAATGGTCTGTAGTCCCGTGAGTTTCTTGCATTaGCAATTCTCTGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: RNSGSSEDFTWVLMVCSPVSFLH*QFSDAS
Trigger: AGAAGCATCAGAGAATTGCAAATGCAAGAAACTCAC...GGGACTACAGACCATTAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGAGCTGGAAGCTATGTCACACTAACAGCTGCCTTGTTTCTTAGAGGCTGTGTTAGCTATAGTCCGGTTTaGAATGAATGTTGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: GAGSYVTLTAALFLRGCVSYSPV*NECCPF
Trigger: AAAAGGACAACATTCATTCAAAACCGGACTATAGCT...AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGTGACATAGCTTCCAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAGGATTAGGTGACAGCTaGAGGAGGCAGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRGLGDS*RRQSCF
Trigger: GAAACAGCTCTGCCTCCTCAAGCTGTCACCTAATCC...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTCTGGCCTCCCTTCTTTaGCCATCTCCACAACCACTG +
Preference number: 5 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSILASLL*PSPQPL
Trigger: CAGTGGTTGTGGAGATGGCAAAAGAAGGGAGGCCAG...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCATCTCTGCAGCTTTCTTaGGGTTTGATGAATTGGCAG +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPSLQLS*GLMNWQ
Trigger: CTGCCAATTCATCAAACCCAAAGAAAGCTGCAGAGA...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTGTAGTATCATTCAGTCTTCTCTGCAGCTTTCTTaGGGTTTGATGAATTGGCAG +
Preference number: 5 (lower is better)
Translates to: GKNVPILIGRGLCSIIQSSLQLS*GLMNWQ
Trigger: CTGCCAATTCATCAAACCCAAAGAAAGCTGCAGAGA...AGACTGAATGATACTACACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTCCCACTCTAAGCTATaGAGGGCCAGTGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVSHSKL*RASECE
Trigger: TTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGA...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS GCA 90 bp CTGTTTCTGCGGGGAGCAGCAATGATTCTCAGGTTCTTCAAAATATaGTTGACCTTTGGCCTTCTCTCCAAATATACAAGGTTGACTTTT +
Preference number: 5 (lower is better)
Translates to: LFLRGAAMILRFFKI*LTFGLLSKYTRLTF
Trigger: AAAAGTCAACCTTGTATATTTGGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAACCTGAGAATCATTGCTGCTCCCCGCAGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGACATCTGTCACAGCCCTaGATAGCTCTGCCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRHLSQP*IALPLV
Trigger: AACTAGAGGCAGAGCTATCAAGGGCTGTGACAGATG...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGGGTATCCATGTTAGCTaGAGCACATGCTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVGIHVS*STCSLQ
Trigger: CTGCAATGAGCATGTGCTCAAGCTAACATGGATACC...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATGCTTCTCACGTCTTTaGGGAAGATCCCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLCFSRL*GRSQAA
Trigger: AGCTGCCTGGGATCTTCCCAAAAGACGTGAGAAGCA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCATTCTTCAAAATATGCTaGACCTTTGGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPFFKIC*TFGLLS
Trigger: GGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAA...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCGGATTAGGTGACAGCTaGAGGAGGCAGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSGLGDS*RRQSCF
Trigger: GAAACAGCTCTGCCTCCTCAAGCTGTCACCTAATCC...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATATCTCTGCAGCTTTCTTaGGGTTTGATGAATTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKISLQLS*GLMNWQ
Trigger: CTGCCAATTCATCAAACCCAAAGAAAGCTGCAGAGA...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATAACCAGGAATTGGTGTTaGATTGTAATGTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKITRNWC*IVMSLL
Trigger: CAGCAGGGACATTACAATCAAACACCAATTCCTGGT...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCAACTTTTTGTTCTCGTTaGAGGGGATGGAAAGGTATC +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPTFCSR*RGWKGI
Trigger: GATACCTTTCCATCCCCTCAAACGAGAACAAAAAGT...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATCCCACTCTAAGCTATaGAGGGCCAGTGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRSHSKL*RASECE
Trigger: TTCACACTCACTGGCCCTCAATAGCTTAGAGTGGGA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CCACACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTTTTGCTCTGGAATCTTaGTCCAAAAGGTATGCAACT +
Preference number: 5 (lower is better)
Translates to: PHSPFINQELVFDCNVPAFALES*SKRYAT
Trigger: AGTTGCATACCTTTTGGACAAAGATTCCAGAGCAAA...AGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS CCA 90 bp GGGAGCAGCAATGATTCTCAGGTTCTTCAAAATATGCTTGACCTTTaGCCTTCTCTCCAAATATACAAGGTTGACTTTTACTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GSSNDSQVLQNMLDL*PSLQIYKVDFYFAV
Trigger: GACAGCAAAGTAAAAGTCAACCTTGTATATTTGGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAACCTGAGAATCATTGCTGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATTGAGCACATGCTCATaGCAGACAGACCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLLSTCS*QTDHCS
Trigger: TGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATGGTATCCATGTTAGCTaGAGCACATGCTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHGIHVS*STCSLQ
Trigger: CTGCAATGAGCATGTGCTCAAGCTAACATGGATACC...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGTGAGTTTCTTGCATTaGCAATTCTCTGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: HSPFINQELVFDCNVPAEVSFLH*QFSDAS
Trigger: AGAAGCATCAGAGAATTGCAAATGCAAGAAACTCAC...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGAGGTTGACTTTTACTTaGCTGTCAGAGCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWRLTFT*LSEPRH
Trigger: GTGCCTTGGCTCTGACAGCAAAGTAAAAGTCAACCT...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATATTCTTCAAAATATGCTaGACCTTTGGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LPSLTRNWCLIVMSLLKIFFKIC*TFGLLS
Trigger: GGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAA...TATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGCAAGAATGTGCCCATATTAATAGGGAGAGGACTGTGTAGTATCATTCAGTCTCTAGGCATTGATACTTaGCCTTTTAGAAGAGATCCA +
Preference number: 5 (lower is better)
Translates to: GKNVPILIGRGLCSIIQSLGIDT*PFRRDP
Trigger: TGGATCTCTTCTAAAAGGCAAAGTATCAATGCCTAG...AGACTGAATGATACTACACAGTCCTCTCCCTATTAATATGGGCACATTCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611038.4
ENST00000631822.1
CDS-3UTR CAA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTGCAGGGAATACTTTTaGTTCTCGTTTGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVCREYF*FSFEGM
Trigger: CATCCCCTCAAACGAGAACAAAAAGTATTCCCTGCA...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGACACTAACAGCTGCCTaGTTTCTTAGAGGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVTLTAA*FLRGCV
Trigger: AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGT...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAATTTGCTCTGGAATCTTaGTCCAAAAGGTATGCAACT +
Preference number: 5 (lower is better)
Translates to: HSPFINQELVFDCNVPAEFALES*SKRYAT
Trigger: AGTTGCATACCTTTTGGACAAAGATTCCAGAGCAAA...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATCAGAGCCACCTTAGGAATTCTGGATCGTCAGAAGACTTCACTTGGGTACTATTAAGCAGGTTAGATTaGACTCATAGCTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: YQSHLRNSGSSEDFTWVLLSRLD*THSYSP
Trigger: AGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAA...TAGTACCCAAGTGAAGTCTTCTGACGATCCAGAATTCCTAAGGTGGCTCTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCATTCTGTGTGAGTTTCTaGCATTTGCAATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPFCVSF*HLQFSD
Trigger: ATCAGAGAATTGCAAATGCAAGAAACTCACACAGAA...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCAAGCTATAGTCCGGTTTaGAATGAATGTTGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPSYSPV*NECCPF
Trigger: AAAAGGACAACATTCATTCAAAACCGGACTATAGCT...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATTTGGGTTTGATGAATaGGCAGCATCTTGTCCAACC +
Preference number: 5 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRFGFDE*AASCPT
Trigger: GGTTGGACAAGATGCTGCCAATTCATCAAACCCAAA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATTTTGGGTTTGATGAATaGGCAGCATCTTGTCCAACC +
Preference number: 5 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHFGFDE*AASCPT
Trigger: GGTTGGACAAGATGCTGCCAATTCATCAAACCCAAA...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGACACTAACAGCTGCCTaGTTTCTTAGAGGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWTLTAA*FLRGCV
Trigger: AACACAGCCTCTAAGAAACAAGGCAGCTGTTAGTGT...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GATTGTAATGTCCCTGCTGAAGATACAAGTGTGAAATTGGCAAGAATGTGCCCATTTTTCACCTCAACATaGATTCAAGATCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: DCNVPAEDTSVKLARMCPFFTST*IQDQVV
Trigger: AACCACCTGATCTTGAATCAATGTTGAGGTGAAAAA...TGGGCACATTCTTGCCAATTTCACACTTGTATCTTCAGCAGGGACATTACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CACTCTCCCTTCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAATTTTTCACCTCAACATaGATTCAAGATCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: HSPFINQELVFDCNVPAEFFTST*IQDQVV
Trigger: AACCACCTGATCTTGAATCAATGTTGAGGTGAAAAA...TTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGAAGGGAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TTTGAGGGGATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGATTCTTCAAAATATGCTaGACCTTTGGCCTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FEGMERYPFRWMYEVNYRFFKIC*TFGLLS
Trigger: GGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAA...TCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCATCCCCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAACCAGGAATTGGTGTTaGATTGTAATGTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLTRNWC*IVMSLL
Trigger: CAGCAGGGACATTACAATCAAACACCAATTCCTGGT...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TCATTAACCAGGAATTGGTGTTTGATTGTAATGTCCCTGCTGAAGATACAAGTGTTTGCTCTGGAATCTTaGTCCAAAAGGTATGCAACT +
Preference number: 5 (lower is better)
Translates to: SLTRNWCLIVMSLLKIQVFALES*SKRYAT
Trigger: AGTTGCATACCTTTTGGACAAAGATTCCAGAGCAAA...CACTTGTATCTTCAGCAGGGACATTACAATCAAACACCAATTCCTGGTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp ATGGAAAGGTATCCATTTAGATGGATGTATGAAGTGAATTACAGAAGGTTGTGGGTGAGTTTCTTGCATTaGCAATTCTCTGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: MERYPFRWMYEVNYRRLWVSFLH*QFSDAS
Trigger: AGAAGCATCAGAGAATTGCAAATGCAAGAAACTCAC...CCACAACCTTCTGTAATTCACTTCATACATCCATCTAAATGGATACCTTTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp AACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCGTGAGTTTCTTGCATTaGCAATTCTCTGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: NIDSRSGGFTFSPNSYLSVSFLH*QFSDAS
Trigger: AGAAGCATCAGAGAATTGCAAATGCAAGAAACTCAC...GCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp CTCAACATTGATTCAAGATCAGGTGGTTTCACTTTCTCACCAAACTCTTATTTATTTGCTCTGGAATCTTaGTCCAAAAGGTATGCAACT +
Preference number: 5 (lower is better)
Translates to: LNIDSRSGGFTFSPNSYLFALES*SKRYAT
Trigger: AGTTGCATACCTTTTGGACAAAGATTCCAGAGCAAA...TAAATAAGAGTTTGGTGAGAAAGTGAAACCACCTGATCTTGAATCAATGTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATTTAAGCAGGTTAGATTaGACTCATAGCTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHLSRLD*THSYSP
Trigger: AGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAA...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp GGTGGTTTCACTTTCTCACCAAACTCTTATTTAAGCAGGTTAGATTTGACTCATTTTTTCACCTCAACATaGATTCAAGATCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GGFTFSPNSYLSRLDLTHFFTST*IQDQVV
Trigger: AACCACCTGATCTTGAATCAATGTTGAGGTGAAAAA...ATGAGTCAAATCTAACCTGCTTAAATAAGAGTTTGGTGAGAAAGTGAAACCACC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTTTCTGTGTGAGTTTCTaGCATTTGCAATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSIFCVSF*HLQFSD
Trigger: ATCAGAGAATTGCAAATGCAAGAAACTCACACAGAA...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS-3UTR CAA 90 bp TATTTAAGCAGGTTAGATTTGACTCATAGCTATTCTCCTGTGAGAAACAGCATTAGCTATAGTCCGGTTTaGAATGAATGTTGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: YLSRLDLTHSYSPVRNSISYSPV*NECCPF
Trigger: AAAAGGACAACATTCATTCAAAACCGGACTATAGCT...AATGCTGTTTCTCACAGGAGAATAGCTATGAGTCAAATCTAACCTGCTTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS CAA 90 bp GCACATGCTCATTGCAGACAGACCACTGCTCATCTGTCACAGCCCTaGATAGCTCTGCCTCTAGTTGCTTTCACCACACGCAGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: AHAHCRQTTAHLSQP*IALPLVAFTTRSWN
Trigger: GTTCCAGCTGCGTGTGGTGAAAGCAACTAGAGGCAGAGCTATCAAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS CCA 72 bp GCCATCTCCACAACCACTGGCATTGGCACAGCTTCCTaGCTCCTAGGCATTGATAAGGACATGGGACTTCAA +
Preference number: 6 (lower is better)
Translates to: AISTTTGIGTAS*LLGIDKDMGLQ
Trigger: TTGAAGTCCCATGTCCTTATCAATGCCTAGGAGCCAGGAAGCTGTGCCAATGCCAGTGGTTGTGGAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615133.2
ENST00000616425.2
CDS CAA 72 bp CATTGCAGACAGACCACTGCTCATCTGTCACAGCCCTaGATAGCTCTGCCTCTAGTTGCTTTCACCACACGC +
Preference number: 6 (lower is better)
Translates to: HCRQTTAHLSQP*IALPLVAFTTR
Trigger: GCGTGTGGTGAAAGCAACTAGAGGCAGAGCTATCAAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS GCA 72 bp GTTAGCTTGAGCACATGCTCATTGCAGACAGACCACTaGTCATCTGTCACAGCCCTTGATAGCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: VSLSTCSLQTDH*SSVTALDSSAS
Trigger: AGAGGCAGAGCTATCAAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS CAA 90 bp GCTGAAGACCAAGATGGTATCCATGTTAGCTTGAGCACATGCTCATaGCAGACAGACCACTGCTCATCTGTCACAGCCCTTGATAGCTCT +
Preference number: 6 (lower is better)
Translates to: AEDQDGIHVSLSTCS*QTDHCSSVTALDSS
Trigger: AGAGCTATCAAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAACATGGATACCATCTTGGTCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS CAA 72 bp CAAGATGGTATCCATGTTAGCTTGAGCACATGCTCATaGCAGACAGACCACTGCTCATCTGTCACAGCCCTT +
Preference number: 6 (lower is better)
Translates to: QDGIHVSLSTCS*QTDHCSSVTAL
Trigger: AAGGGCTGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAACATGGATACCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS GCA 72 bp GAAGACCAAGATGGTATCCATGTTAGCTTGAGCACATaGTCATTGCAGACAGACCACTGCTCATCTGTCACA +
Preference number: 6 (lower is better)
Translates to: EDQDGIHVSLST*SLQTDHCSSVT
Trigger: TGTGACAGATGAGCAGTGGTCTGTCTGCAATGAGCATGTGCTCAAGCTAACATGGATACCATCTTGGTCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000631822.1
CDS CAA 72 bp AGAGCCAAGGCACTGCAGGGTAGCTATAGTCCGGTTTaGAATGAATGTTGTCCTTTTGGTTTCTGTGTGAGT +
Preference number: 6 (lower is better)
Translates to: RAKALQGSYSPV*NECCPFGFCVS
Trigger: ACTCACACAGAAACCAAAAGGACAACATTCATTCAAAACCGGACTATAGCTACCCTGCAGTGCCTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS CAA 72 bp TGCTTGACCTTTGGCCTTCTCTCCAAATATACAAGGTaGACTTTTACTTTGCTGTCAGAGCCAAGGCACTGC +
Preference number: 6 (lower is better)
Translates to: CLTFGLLSKYTR*TFTLLSEPRHC
Trigger: GCAGTGCCTTGGCTCTGACAGCAAAGTAAAAGTCAACCTTGTATATTTGGAGAGAAGGCCAAAGGTCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS CAA 90 bp TTCAAAATATGCTTGACCTTTGGCCTTCTCTCCAAATATACAAGGTaGACTTTTACTTTGCTGTCAGAGCCAAGGCACTGCAGGGTAGCT +
Preference number: 6 (lower is better)
Translates to: FKICLTFGLLSKYTR*TFTLLSEPRHCRVA
Trigger: AGCTACCCTGCAGTGCCTTGGCTCTGACAGCAAAGTAAAAGTCAACCTTGTATATTTGGAGAGAAGGCCAAAGGTCAAGCATATTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1
CDS CAA 72 bp GGAGCAGCAATGATTCTCAGGTTCTTCAAAATATGCTaGACCTTTGGCCTTCTCTCCAAATATACAAGGTTG +
Preference number: 6 (lower is better)
Translates to: GAAMILRFFKIC*TFGLLSKYTRL
Trigger: CAACCTTGTATATTTGGAGAGAAGGCCAAAGGTCAAGCATATTTTGAAGAACCTGAGAATCATTGCTGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611038.4
ENST00000615133.2
ENST00000616425.2
ENST00000631822.1