RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C16ORF89 (Homo sapiens)

Ensembl gene IDs: ENSG00000153446

Ensembl transcript IDs: ENST00000315997.5, ENST00000472572.8, ENST00000474471.7, ENST00000586629.5, ENST00000591875.1, ENST00000592343.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCTCCAGGCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTaGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTTGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: LLQAAGMEPSVSAAA*WWRCGWVWLSVCWG
Trigger: CCCCCAGCAAACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR GCA 90 bp GTTCCTCCTCCAGGCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTaGTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTTGCTG +
Preference number: 1 (lower is better)
Translates to: VPPPGSWHGTVRLSG*LVVAVWMGVALCLL
Trigger: CAGCAAACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 90 bp GGGATGAGGACTAAAGGGGTCTGTTCCTCCTCCAGGCAGCTGGCATaGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGAT +
Preference number: 1 (lower is better)
Translates to: GMRTKGVCSSSRQLA*NRPSQRLLGGGGVD
Trigger: ATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGGAACAGACCCCTTTAGTCCTCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 90 bp ATGTATAGGAAGCCACCCAGGGCTGCCACTGCTGTGGCTGTGTTGTaGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: MYRKPPRAATAVAVL*EEQPSRGESPHECW
Trigger: CCAGCACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCCACAACACAGCCACAGCAGTGGCAGCCCTGGGTGGCTTCCTATACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR TCA 90 bp GCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATaGGGACTAAAGGGGTCTGTTCCTCCTCCAGGCAGCTGGCATGGA +
Preference number: 1 (lower is better)
Translates to: AFFPGCDPCPPGSKG*GLKGSVPPPGSWHG
Trigger: TCCATGCCAGCTGCCTGGAGGAGGAACAGACCCCTTTAGTCCTCATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
3UTR GCA 90 bp GTGTTGTGGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTaGTGGGTGGCAAGAACCTTGGCCCTTTATTCAACACAGTCTCAT +
Preference number: 1 (lower is better)
Translates to: VLWEEQPSRGESPHE*WVARTLALYSTQSH
Trigger: ATGAGACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCCACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 90 bp GGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTGCTGGGTaGCAAGAACCTTGGCCCTTTATTCAACACAGTCTCATTGAAAGT +
Preference number: 1 (lower is better)
Translates to: GRSSHLGERAPMSAG*QEPWPFIQHSLIES
Trigger: ACTTTCAATGAGACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CAA 90 bp CCTCCTCCAGGCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTaGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PPPGSWHGTVRLSGC*VVAVWMGVALCLLG
Trigger: CCCCAGCAAACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CCA 90 bp CCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTAGCCCCCATGAGTGCTaGGTGGCAAGAACCTTGGCC +
Preference number: 2 (lower is better)
Translates to: PSVSAAAWWWRCGWVWLSSPHEC*VARTLA
Trigger: GGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCT...AGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR TCA 90 bp CAGTTGCAGTTGAACTTTATTCATCCGTTCACACCTGGGTCCCTCCCGGCCCCCGGGAGAGAGCCCCCATaGGTGCTGGGTGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: QLQLNFIHPFTPGSLPAPGREPP*VLGGKN
Trigger: GTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCC...GGGGGCCGGGAGGGACCCAGGTGTGAACGGATGAATAAAGTTCAACTGCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR GCA 90 bp ACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCGAGAGCCCCCATGAGTaGTGGGTGGCAAGAACCTTG +
Preference number: 2 (lower is better)
Translates to: TLALPTQGFQDWVSGWLCESPHE*WVARTL
Trigger: CAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTC...GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CCA 90 bp GCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGAGGGTGGCAAGAACCTTaGCCCTTTATTCAACACAGT +
Preference number: 2 (lower is better)
Translates to: AAGMEPSVSAAAWWWRCGGWQEP*PFIQHS
Trigger: ACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCC...TCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CCA 90 bp CTCCTCCAGGCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGGGGTGGCAAGAACCTTaGCCCTTTATTCAACACAGT +
Preference number: 2 (lower is better)
Translates to: LLQAAGMEPSVSAAAWWWGWQEP*PFIQHS
Trigger: ACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCC...CCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CCA 90 bp CCTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTCCCATGAGTGCTGGGTaGCAAGAACCTTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: PTLALPTQGFQDWVSGWLPMSAG*QEPWPF
Trigger: AAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGG...AAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CCA 90 bp TTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCCCTCCTCCAGGCAGCTaGCATGGAACCGTCCGTCTC +
Preference number: 2 (lower is better)
Translates to: LPTQGFQDWVSGWLCLSSPPPGS*HGTVRL
Trigger: GAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGG...GGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CAA 90 bp GGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTaGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCC +
Preference number: 2 (lower is better)
Translates to: GLAYSGLPRLGVGVA*LILQMPSSQDVIRA
Trigger: GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
3UTR-3UTR CCA 90 bp GGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCGCTGTGGCTGTGTTGTaGGAGGAGCAGCCATCTAGG +
Preference number: 2 (lower is better)
Translates to: GLAYSGLPRLGVGVALLIAVAVL*EEQPSR
Trigger: CCTAGATGGCTGCTCCTCCCACAACACAGCCACAGC...GATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCCCATGAGTGCTGGGTaGCAAGAACCTTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLPMSAG*QEPWPF
Trigger: AAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGG...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR TCA 90 bp ACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTCAACACAGTCTCATTaGAAGTGCTTTTCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: TLALPTQGFQDWVSGWLCSTQSH*KCFSAR
Trigger: TCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGA...GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR TCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTTCAACACAGTCTCATTaGAAGTGCTTTTCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLSTQSH*KCFSAR
Trigger: TCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGA...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp GCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTaGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: AGMEPSVSAAAW*WRCGWVWLSVC
Trigger: GCAAACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp GCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTaGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: AAGMEPSVSAAA*WWRCGWVWLSV
Trigger: AACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp ACTAAAGGGGTCTGTTCCTCCTCCAGGCAGCTGGCATaGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: TKGVCSSSRQLA*NRPSQRLLGGG
Trigger: GCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGGAACAGACCCCTTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CAA 90 bp ACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGGGTGGCAAGAACCTaGGCCCTTTATTCAACACAG +
Preference number: 3 (lower is better)
Translates to: TVRLSGCLVVAVWMGVALWVART*ALYSTQ
Trigger: CTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCA...GAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CAA 90 bp TTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCCGTCTCAGCGGCTGCTaGGTGGTGGCGGTGTGGATG +
Preference number: 3 (lower is better)
Translates to: LPTQGFQDWVSGWLCLSSRLSGC*VVAVWM
Trigger: CATCCACACCGCCACCACCAAGCAGCCGCTGAGACG...GGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp CCTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTaGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: PTLALPTQGFQD*VSGWLCLSSRC
Trigger: GCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
3UTR GCA 72 bp GAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTaGTGGGTGGCAAGAACCTTGGCCCTTTATTCAACA +
Preference number: 3 (lower is better)
Translates to: EEQPSRGESPHE*WVARTLALYST
Trigger: TGTTGAATAAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp GAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTGCTaGGTGGCAAGAACCTTGGCCCTTTATTCAACACAG +
Preference number: 3 (lower is better)
Translates to: EQPSRGESPHEC*VARTLALYSTQ
Trigger: CTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp TTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTaGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGG +
Preference number: 3 (lower is better)
Translates to: LPTQGFQDWVSG*LCLSSRCLLPR
Trigger: CCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
3UTR-3UTR CAA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTTTCAACACAGTCTCATaGAAAGTGCTTTTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFFNTVS*KVLFSQ
Trigger: CTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAA...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CAA 90 bp AGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATTGGGTGGCAAGAACCTaGGCCCTTTATTCAACACAG +
Preference number: 3 (lower is better)
Translates to: RLGVGVALLILQMPSSQDWVART*ALYSTQ
Trigger: CTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCA...ATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR-3UTR CAA 90 bp GGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCTTCAACACAGTCTCATaGAAAGTGCTTTTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: GLAYSGLPRLGVGVALLIFNTVS*KVLFSQ
Trigger: CTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAA...GATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CCA 72 bp GAGAGAGCCCCCATGAGTGCTGGGTGGCAAGAACCTTaGCCCTTTATTCAACACAGTCTCATTGAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: ERAPMSAGWQEP*PFIQHSLIESA
Trigger: AGCACTTTCAATGAGACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR TCA 90 bp CTCCTCCAGGCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGGGGAGAGAGCCCCCATaGGTGCTGGGTGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LLQAAGMEPSVSAAAWWWGREPP*VLGGKN
Trigger: GTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCC...CCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp CCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGGAGTGGTCCCTGTGTaGACCCCCTCATTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PSVSAAAWWWRCGWVWLSGVVPV*TPSFWP
Trigger: GGGCCAGAATGAGGGGGTGCACACAGGGACCACTCC...AGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGCCTGGGGCCCGAACGTaGGGTACACCAAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LAWNRPSQRLLGGGGVDGPGART*GTPRRH
Trigger: ATGCCTCCTTGGTGTACCCCACGTTCGGGCCCCAGG...CCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGACCTCCTCCAGGCAGCTaGCATGGAACCGTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: AAGMEPSVSAAAWWWRCGPPPGS*HGTVRL
Trigger: GAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGG...TCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CAA 72 bp GGCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTaGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSWHGTVRLSGC*VVAVWMGVALC
Trigger: ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp GGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCGCAGGCTCAGCGGCTaGAGCAGGGGCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLAYSGLPRLGVGVALLIRRLSG*SRGSWA
Trigger: GGCCCAGGAGCCCCTGCTGCAGCCGCTGAGCCTGCG...GATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGAGAAGCCACCCAGGGCTaGCACTGCTGTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AAGMEPSVSAAAWWWRCGEATQG*HCCGCV
Trigger: AACACAGCCACAGCAGTGGCAGCCCTGGGTGGCTTC...TCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp TCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTGCGGCTGCTTGGTGGTaGCGGTGTGGATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVSAAAWWWRCGWVWLSVAAAWW*RCGWVW
Trigger: CCACACCCATCCACACCGCCACCACCAAGCAGCCGC...AACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR TCA 90 bp ACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCCTTCTTCCCAGGATGTaGTCCGTGCCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TVRLSGCLVVAVWMGVALLLPRM*SVPSRI
Trigger: GATCCTGGAGGGCACGGATCACATCCTGGGAAGAAG...GAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTCGCAGGCTCAGCGGCTaGAGCAGGGGCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLPRLGVGVALLILQMPSRRLSG*SRGSWA
Trigger: GGCCCAGGAGCCCCTGCTGCAGCCGCTGAGCCTGCG...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp ACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCGTGGATCCAGGCATGTaGGAGCTTCCAAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: TVRLSGCLVVAVWMGVALVDPGM*ELPKPG
Trigger: CCCGGGTTTTGGAAGCTCCCACATGCCTGGATCCAC...GAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTCTGGCTCTGTTGGAGTaGTCCCTGTGTGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: VRLSGCLVVAVWMGVALCLALLE*SLCAPP
Trigger: AGGGGGTGCACACAGGGACCACTCCAACAGAGCCAG...ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGGCTGTGGCTGTGTTGTaGGAGGAGCAGCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: RPSQRLLGGGGVDGCGSLAVAVL*EEQPSR
Trigger: CCTAGATGGCTGCTCCTCCCACAACACAGCCACAGC...CAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR TCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCGCTCCTGCAGAGGTCTaGGAGGCCGCAGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSAPAEV*EAAGLA
Trigger: AGCGAGCCCTGCGGCCTCTCAGACCTCTGCAGGAGC...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CCTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTAGCCGGGCTTGGTCATaGGGCTCCTGCAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PTLALPTQGFQDWVSGWLSRAWS*GSCRGL
Trigger: CAGACCTCTGCAGGAGCCTCATGACCAAGCCCGGCT...AAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATGTGGCCCGGCAGGGCTaGCAAGAAGCCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDVARQG*QEAWGG
Trigger: GCCACCCCAGGCTTCTTGGCAGCCCTGCCGGGCCAC...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR GCA 90 bp TTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCGCAGGCTCAGCGGCTaGAGCAGGGGCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLILQMPSSQDVIRALQDRRLSG*SRGSWA
Trigger: GGCCCAGGAGCCCCTGCTGCAGCCGCTGAGCCTGCG...ATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGGCCGCAGGGCTCGCTaGTGTCCGTCCCGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLLRASKIGCRGGFAYPPGRRAR*CPSRFP
Trigger: TGGGAACCGGGACGGACAGCAGCGAGCCCTGCGGCC...TGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGCCAGGATGTGATCCGTaGCCTCCAGGATCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LAWNRPSQRLLGGGGVDGPGCDP*PPGSKG
Trigger: TCCCTTAGATCCTGGAGGGCACGGATCACATCCTGG...CCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTGCACCCCCTCATTCTaGCCCAGAGGAAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPSQRLLGGGGVDGCGSLCTPSF*PRGRRA
Trigger: TGCTCTTCTTCCTCTGGGCCAGAATGAGGGGGTGCA...CAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGCCCATGAGTGCTGGGTaGCAAGAACCTTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LAWNRPSQRLLGGGGVDGPMSAG*QEPWPF
Trigger: AAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGG...CCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTCAGGGCTTCCAAGATTaGGTGTCGGGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VRLSGCLVVAVWMGVALCQGFQD*VSGWLC
Trigger: GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG...ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTTCATCCGTTCACACCTaGGTCCCTCCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFSSVHT*VPPGPH
Trigger: GTGGGGGCCGGGAGGGACCCAGGTGTGAACGGATGA...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp GCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGACCATGCCATCCAGGTTaGTTTCAGGCAGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AAGMEPSVSAAAWWWRCGPCHPG*FQAASV
Trigger: AACAGAGGCTGCCTGAAATCAACCTGGATGGCATGG...TCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCTGGCCAAGCCCAGACTaGCTCTGCACGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCWPSPD*LCTPSS
Trigger: GGAGGAGGGCGTGCAGAGGCAGTCTGGGCTTGGCCA...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR GCA 90 bp CAGTTGCAGTTGAACTTTATTCATCCGTTCACACCTGGGTCCCTCCCGGCCCCCGCCATGGCCGGCCTCTaGTCACTGCTGGTCACACGC +
Preference number: 4 (lower is better)
Translates to: QLQLNFIHPFTPGSLPAPAMAGL*SLLVTR
Trigger: GCGTGTGACCAGCAGTGAGCAGAGGCCGGCCATGGC...GGGGGCCGGGAGGGACCCAGGTGTGAACGGATGAATAAAGTTCAACTGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGCGGACACTTTTTAGCTaGTCTTCCAGCACTCGGACC +
Preference number: 4 (lower is better)
Translates to: RPSQRLLGGGGVDGCGSLRTLFS*SSSTRT
Trigger: GGTCCGAGTGCTGGAAGAGCAGCTAAAAAGTGTCCG...CAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp CTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGCGGACACTTTTTAGCTaGTCTTCCAGCACTCGGACC +
Preference number: 4 (lower is better)
Translates to: LAWNRPSQRLLGGGGVDGRTLFS*SSSTRT
Trigger: GGTCCGAGTGCTGGAAGAGCAGCTAAAAAGTGTCCG...CCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp CTGTGGCTGTGTTGTGGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTCCGGTTCCCAGCAGCTaGACCAGGCACACGTCACTT +
Preference number: 4 (lower is better)
Translates to: LWLCCGRSSHLGERAPMSPVPSS*TRHTSL
Trigger: AAGTGACGTGTGCCTGGTGCAGCTGCTGGGAACCGG...ACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCCACAACACAGCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGCCGCAGGGCTCGCTaGTGTCCGTCCCGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKGRRAR*CPSRFP
Trigger: TGGGAACCGGGACGGACAGCAGCGAGCCCTGCGGCC...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGGGCCGCAGGGCTCGCTaGTGTCCGTCCCGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: YSGLPRLGVGVALLILQMGRRAR*CPSRFP
Trigger: TGGGAACCGGGACGGACAGCAGCGAGCCCTGCGGCC...CATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTGAGAGCCCCCATGAGTaGTGGGTGGCAAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: SVSAAAWWWRCGWVWLSVESPHE*WVARTL
Trigger: CAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTC...AACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp ACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCGAAGCCACCCAGGGCTaGCACTGCTGTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TLALPTQGFQDWVSGWLCEATQG*HCCGCV
Trigger: AACACAGCCACAGCAGTGGCAGCCCTGGGTGGCTTC...GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCGTCCGTCTCAGCGGCTaGTTGGTGGTGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GVALLILQMPSSQDVIRAVRLSG*LVVAVW
Trigger: CCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGGCTGCCAAGAAGCCTaGGGTGGCCTGGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFGCQEA*GGLGKG
Trigger: TCCTTTGCCCAGGCCACCCCAGGCTTCTTGGCAGCC...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR CCA 90 bp ACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCGATTGGGTGTCGGGGTaGCTTTGCTTATCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TVRLSGCLVVAVWMGVALDWVSG*LCLSSR
Trigger: TCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC...GAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCATCCGTTCACACCTaGGTCCCTCCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSSSVHT*VPPGPH
Trigger: GTGGGGGCCGGGAGGGACCCAGGTGTGAACGGATGA...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCGCTCCTGCAGAGGTCTaGGAGGCCGCAGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFAPAEV*EAAGLA
Trigger: AGCGAGCCCTGCGGCCTCTCAGACCTCTGCAGGAGC...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGCTCCTGCAGAGGTCTaGGAGGCCGCAGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKAPAEV*EAAGLA
Trigger: AGCGAGCCCTGCGGCCTCTCAGACCTCTGCAGGAGC...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCAGCCGGGCTTGGTCATaGGGCTCCTGCAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSSRAWS*GSCRGL
Trigger: CAGACCTCTGCAGGAGCCTCATGACCAAGCCCGGCT...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTAGGGAGAGAGCCCCCATaGGTGCTGGGTGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLGREPP*VLGGKN
Trigger: GTTCTTGCCACCCAGCACTCATGGGGGCTCTCTCCC...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATAGCCCAGACTGCCTCTaGACGCCCTCCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYSPDCL*TPSSHL
Trigger: GAGGTGGGAGGAGGGCGTGCAGAGGCAGTCTGGGCT...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR GCA 90 bp GATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGGCCATGGCCGGCCTCTaGTCACTGCTGGTCACACGC +
Preference number: 4 (lower is better)
Translates to: DWVSGWLCLSSRCLLPRMAMAGL*SLLVTR
Trigger: GCGTGTGACCAGCAGTGAGCAGAGGCCGGCCATGGC...CATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTCGATGGCCTCAGCTCTaGGGTTCAAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: VRLSGCLVVAVWMGVALCRWPQL*GSSPSC
Trigger: ACATGATGGACTTGAACCGCAGAGCTGAGGCCATCG...ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp ACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCAGACATGAAGACAAGTaGCCCGGCAGGGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TLALPTQGFQDWVSGWLCRHEDK*PGRAAK
Trigger: CTTGGCAGCCCTGCCGGGCCACTTGTCTTCATGTCT...GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR CCA 90 bp TCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTGTTCTAGGAAGACGGTaGCTCTCTCCAGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: SVSAAAWWWRCGWVWLSVVLGRR*LSPAQT
Trigger: TGTCTGCGCTGGAGAGAGCCACCGTCTTCCTAGAAC...AACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTTGCAGCAGGGGCTCCTaGGCCCACTTCTCCCGGACA +
Preference number: 4 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLCSRGS*AHFSRT
Trigger: TGTCCGGGAGAAGTGGGCCCAGGAGCCCCTGCTGCA...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp AGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTGCAGCAGGGGCTCCTaGGCCCACTTCTCCCGGACA +
Preference number: 4 (lower is better)
Translates to: RASKIGCRGGFAYPPDAFCSRGS*AHFSRT
Trigger: TGTCCGGGAGAAGTGGGCCCAGGAGCCCCTGCTGCA...GAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTACCTGGGGCCCGAACGTaGGGTACACCAAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLPGART*GTPRRH
Trigger: ATGCCTCCTTGGTGTACCCCACGTTCGGGCCCCAGG...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGTGGCTGTGTTGTGGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTTCTGAGAATGAGTCCTaGGGCCCGAACGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LWLCCGRSSHLGERAPMSSENES*GPNVGY
Trigger: GTACCCCACGTTCGGGCCCCAGGACTCATTCTCAGA...ACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCCACAACACAGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp TCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTTGCACCCCCTCATTCTaGCCCAGAGGAAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SVSAAAWWWRCGWVWLSVCTPSF*PRGRRA
Trigger: TGCTCTTCTTCCTCTGGGCCAGAATGAGGGGGTGCA...AACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTAGCCCCCATGAGTGCTaGGTGGCAAGAACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFSPHEC*VARTLA
Trigger: GGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCT...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCGTCTCAGCGGCTGCTTaGTGGTGGCGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GLAYSGLPRLGVGVALLIVSAAA*WWRCGW
Trigger: CCATCCACACCGCCACCACCAAGCAGCCGCTGAGAC...GATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCCCTCCTCCAGGCAGCTaGCATGGAACCGTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSPPPGS*HGTVRL
Trigger: GAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGG...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp ATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGTCATCCGTTCACACCTaGGTCCCTCCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ILQMPSSQDVIRALQDLRSSVHT*VPPGPH
Trigger: GTGGGGGCCGGGAGGGACCCAGGTGTGAACGGATGA...CCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGTCCCCCTGGCAGACATaGAGACAAGTGGCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PRLGVGVALLILQMPSSQSPWQT*RQVARQ
Trigger: CTGCCGGGCCACTTGTCTTCATGTCTGCCAGGGGGA...CTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR TCA 90 bp CCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTAGCCGGGCTTGGTCATaGGGCTCCTGCAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PCLLRASKIGCRGGFAYPSRAWS*GSCRGL
Trigger: CAGACCTCTGCAGGAGCCTCATGACCAAGCCCGGCT...AGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCGCTGTTTCTGCCAGCTaGGAATGGCCTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCAVSAS*EWPPAT
Trigger: GGTGGCTGGAGGCCATTCTCAGCTGGCAGAAACAGC...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCCGGTTCCCAGCAGCTaGACCAGGCACACGTCACTT +
Preference number: 4 (lower is better)
Translates to: GLAYSGLPRLGVGVALLIPVPSS*TRHTSL
Trigger: AAGTGACGTGTGCCTGGTGCAGCTGCTGGGAACCGG...GATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCGGAGTGGTCCCTGTGTaGACCCCCTCATTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPTQGFQDWVSGWLCLSSGVVPV*TPSFWP
Trigger: GGGCCAGAATGAGGGGGTGCACACAGGGACCACTCC...GGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTGGAGTGGTCCCTGTGTaGACCCCCTCATTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PCLLRASKIGCRGGFAYPGVVPV*TPSFWP
Trigger: GGGCCAGAATGAGGGGGTGCACACAGGGACCACTCC...AGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGTCCGTCTCAGCGGCTaGTTGGTGGTGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKVRLSG*LVVAVW
Trigger: CCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTAGCCTCTGCTCACTGCTaGTCACACGCTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLASAHC*SHAQHP
Trigger: AGGGTGCTGAGCGTGTGACCAGCAGTGAGCAGAGGC...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTTCTGAGAATGAGTCCTaGGGCCCGAACGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFSENES*GPNVGY
Trigger: GTACCCCACGTTCGGGCCCCAGGACTCATTCTCAGA...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCAGCCCCCATGAGTGCTaGGTGGCAAGAACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCSPHEC*VARTLA
Trigger: GGCCAAGGTTCTTGCCACCCAGCACTCATGGGGGCT...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGCGGTGTGGATGGGTGTaGCTCTCTGTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AYSGLPRLGVGVALLILQRCGWV*LSVCWG
Trigger: CCCCCAGCAAACAGAGAGCCACACCCATCCACACCG...CTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCGGTGTGGATGGGTGTaGCTCTCTGTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCRCGWV*LSVCWG
Trigger: CCCCCAGCAAACAGAGAGCCACACCCATCCACACCG...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATGCGGCTGCTTGGTGGTaGCGGTGTGGATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLILQMPSSQDVIRALQDAAAWW*RCGWVW
Trigger: CCACACCCATCCACACCGCCACCACCAAGCAGCCGC...ATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGCGGCTGCTTGGTGGTaGCGGTGTGGATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SKIGCRGGFAYPPDAFFPAAAWW*RCGWVW
Trigger: CCACACCCATCCACACCGCCACCACCAAGCAGCCGC...TGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATTCAGCGGCTGCTTGGTaGTGGCGGTGTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDSAAAW*WRCGWV
Trigger: CACCCATCCACACCGCCACCACCAAGCAGCCGCTGA...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTGTCTCAGCGGCTGCTTaGTGGTGGCGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLVSAAA*WWRCGW
Trigger: CCATCCACACCGCCACCACCAAGCAGCCGCTGAGAC...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTGTAGAGCTCCGTCACTaGGGCAGCCTTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLPRLGVGVALLILQMPSVELRH*GSLWGQ
Trigger: CTGCCCCCAAAGGCTGCCCCAGTGACGGAGCTCTAC...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS-3UTR TCA 90 bp CCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTGCTGTTTCTGCCAGCTaGGAATGGCCTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PCLLRASKIGCRGGFAYPAVSAS*EWPPAT
Trigger: GGTGGCTGGAGGCCATTCTCAGCTGGCAGAAACAGC...AGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTCCAGGATGTGATCCGTaGCCTCCAGGATCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFPGCDP*PPGSKG
Trigger: TCCCTTAGATCCTGGAGGGCACGGATCACATCCTGG...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CAGTTGCAGTTGAACTTTATTCATCCGTTCACACCTGGGTCCCTCCCGGCCCCCCACCTACCCTGGCCTTaGCTACTCAGGGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QLQLNFIHPFTPGSLPAPHLPWP*LLRASK
Trigger: CTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGTG...GGGGGCCGGGAGGGACCCAGGTGTGAACGGATGAATAAAGTTCAACTGCAACTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGCACCTACCCTGGCCTTaGCTACTCAGGGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: AYSGLPRLGVGVALLILQHLPWP*LLRASK
Trigger: CTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGTG...CTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCACCTACCCTGGCCTTaGCTACTCAGGGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GVALLILQMPSSQDVIRAHLPWP*LLRASK
Trigger: CTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGTG...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTAAGCCTGGGGTGGCCTaGGCAAAGGACTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLKPGVA*AKDSGK
Trigger: CTTCCCAGAGTCCTTTGCCCAGGCCACCCCAGGCTT...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR CCA 90 bp TTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCCAGCACCCTGAGCTCTaGCCAAGCCCAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: FQDWVSGWLCLSSRCLLPQHPEL*PSPDCL
Trigger: GAGGCAGTCTGGGCTTGGCCAGAGCTCAGGGTGCTG...GGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR CCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTGCCTCTGCTCACTGCTaGTCACACGCTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLASAHC*SHAQHP
Trigger: AGGGTGCTGAGCGTGTGACCAGCAGTGAGCAGAGGC...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGGCCTCTGCTCACTGCTaGTCACACGCTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: DWVSGWLCLSSRCLLPRMASAHC*SHAQHP
Trigger: AGGGTGCTGAGCGTGTGACCAGCAGTGAGCAGAGGC...CATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCTGGGGCCCGAACGTaGGGTACACCAAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLPGART*GTPRRH
Trigger: ATGCCTCCTTGGTGTACCCCACGTTCGGGCCCCAGG...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp ATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGCTGGCTCTGTTGGAGTaGTCCCTGTGTGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: ILQMPSSQDVIRALQDLRLALLE*SLCAPP
Trigger: AGGGGGTGCACACAGGGACCACTCCAACAGAGCCAG...CCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGCTGGCTCTGTTGGAGTaGTCCCTGTGTGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: DWVSGWLCLSSRCLLPRMLALLE*SLCAPP
Trigger: AGGGGGTGCACACAGGGACCACTCCAACAGAGCCAG...CATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCGGTAGGCGTATCCGATaGCCTCAGCTCTGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: GVALLILQMPSSQDVIRAGRRIR*PQLCGS
Trigger: TGAACCGCAGAGCTGAGGCCATCGGATACGCCTACC...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp ACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTGGCTCTCTGTTTGCTaGGGGGTATTCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TLALPTQGFQDWVSGWLCWLSVC*GVFCQD
Trigger: ATCCTGGCAGAATACCCCCCAGCAAACAGAGAGCCA...GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGCGGTGTGGATGGGTGTaGCTCTCTGTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRLGVGVALLILQMPSSQRCGWV*LSVCWG
Trigger: CCCCCAGCAAACAGAGAGCCACACCCATCCACACCG...CTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCTGGTGGCGGTGTGGATaGGTGTGGCTCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCWWRCG*VWLSVC
Trigger: GCAAACAGAGAGCCACACCCATCCACACCGCCACCA...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATTGGTGGTGGCGGTGTaGATGGGTGTGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLLVVAV*MGVALC
Trigger: ACAGAGAGCCACACCCATCCACACCGCCACCACCAA...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCTCAGCGGCTGCTTGGTaGTGGCGGTGTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFSAAAW*WRCGWV
Trigger: CACCCATCCACACCGCCACCACCAAGCAGCCGCTGA...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGTCAGCGGCTGCTTGGTaGTGGCGGTGTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKSAAAW*WRCGWV
Trigger: CACCCATCCACACCGCCACCACCAAGCAGCCGCTGA...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGTCTCAGCGGCTGCTTaGTGGTGGCGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SKIGCRGGFAYPPDAFFPVSAAA*WWRCGW
Trigger: CCATCCACACCGCCACCACCAAGCAGCCGCTGAGAC...TGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCACCTCCTCCAGGCAGCTaGCATGGAACCGTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SKIGCRGGFAYPPDAFFPPPPGS*HGTVRL
Trigger: GAGACGGACGGTTCCATGCCAGCTGCCTGGAGGAGG...TGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGCTGTTTCTGCCAGCTaGGAATGGCCTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKAVSAS*EWPPAT
Trigger: GGTGGCTGGAGGCCATTCTCAGCTGGCAGAAACAGC...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTCTTCTTCCCAGGATGTaGTCCGTGCCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: GLPRLGVGVALLILQMPSLLPRM*SVPSRI
Trigger: GATCCTGGAGGGCACGGATCACATCCTGGGAAGAAG...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp TTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCCTTCTTCCCAGGATGTaGTCCGTGCCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LPTQGFQDWVSGWLCLSSLLPRM*SVPSRI
Trigger: GATCCTGGAGGGCACGGATCACATCCTGGGAAGAAG...GGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCCGGTTCCCAGCAGCTaGACCAGGCACACGTCACTT +
Preference number: 4 (lower is better)
Translates to: LLILQMPSSQDVIRALQDPVPSS*TRHTSL
Trigger: AAGTGACGTGTGCCTGGTGCAGCTGCTGGGAACCGG...ATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTGAGAGCCCCCATGAGTaGTGGGTGGCAAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: GLPRLGVGVALLILQMPSESPHE*WVARTL
Trigger: CAAGGTTCTTGCCACCCAGCACTCATGGGGGCTCTC...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp TTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCGAAGCCACCCAGGGCTaGCACTGCTGTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FQDWVSGWLCLSSRCLLPEATQG*HCCGCV
Trigger: AACACAGCCACAGCAGTGGCAGCCCTGGGTGGCTTC...GGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCGTTCTAGGAAGACGGTaGCTCTCTCCAGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSVLGRR*LSPAQT
Trigger: TGTCTGCGCTGGAGAGAGCCACCGTCTTCCTAGAAC...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGGCTGGAGGGTCAGCTaGAACTCTCTTAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFGWRVS*NSLRYL
Trigger: CAAGTACCTAAGAGAGTTCCAGCTGACCCTCCAGCC...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGTGGATCCAGGCATGTaGGAGCTTCCAAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: CLLRASKIGCRGGFAYPPVDPGM*ELPKPG
Trigger: CCCGGGTTTTGGAAGCTCCCACATGCCTGGATCCAC...TGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CAGTTGCAGTTGAACTTTATTCATCCGTTCACACCTGGGTCCCTCCCGGCCCCCAAGGAGGCATCAGTGTaGATCCAGGCATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLQLNFIHPFTPGSLPAPKEASV*IQACGS
Trigger: GCTCCCACATGCCTGGATCCACACTGATGCCTCCTT...GGGGGCCGGGAGGGACCCAGGTGTGAACGGATGAATAAAGTTCAACTGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCAAGGAGGCATCAGTGTaGATCCAGGCATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCKEASV*IQACGS
Trigger: GCTCCCACATGCCTGGATCCACACTGATGCCTCCTT...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTTATAATCCCACACTTTaGGAGCCTGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFYNPTL*EPEVGG
Trigger: TCCGCCCACCTCAGGCTCCCAAAGTGTGGGATTATA...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp AGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCGCTGTGGCTGTGTTGTaGGAGGAGCAGCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: RASKIGCRGGFAYPPDAFAVAVL*EEQPSR
Trigger: CCTAGATGGCTGCTCCTCCCACAACACAGCCACAGC...GAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp ATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGTGGTGGCGGTGTGGATaGGTGTGGCTCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ILQMPSSQDVIRALQDLRWWRCG*VWLSVC
Trigger: GCAAACAGAGAGCCACACCCATCCACACCGCCACCA...CCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATTGGTGGCGGTGTGGATaGGTGTGGCTCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYWWRCG*VWLSVC
Trigger: GCAAACAGAGAGCCACACCCATCCACACCGCCACCA...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATTTGGTGGTGGCGGTGTaGATGGGTGTGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYLVVAV*MGVALC
Trigger: ACAGAGAGCCACACCCATCCACACCGCCACCACCAA...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp ATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGTTGGTGGTGGCGGTGTaGATGGGTGTGGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ILQMPSSQDVIRALQDLRLVVAV*MGVALC
Trigger: ACAGAGAGCCACACCCATCCACACCGCCACCACCAA...CCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGATTGGGTGTCGGGGTaGCTTTGCTTATCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFDWVSG*LCLSSR
Trigger: TCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCAGGGCTTCCAAGATTaGGTGTCGGGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GVGVALLILQMPSSQDVIQGFQD*VSGWLC
Trigger: GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG...GATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGGGCTTCCAAGATTaGGTGTCGGGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LAYSGLPRLGVGVALLILQGFQD*VSGWLC
Trigger: GCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG...GAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
3UTR CAA 72 bp ACCTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATaGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: TYPGLAYSGLPR*GVGVALLILQM
Trigger: CATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATGGGATCACTCAGCTTaGGGTAGTGGAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLWDHSA*GSGGIS
Trigger: AGAGATCCCTCCACTACCTCAAGCTGAGTGATCCCA...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp GTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTCAACACAGTCTCATTaGAAGTGCTTTTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VRLSGCLVVAVWMGVALCSTQSH*KCFSAR
Trigger: TCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGA...ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCCGATGGCCTCAGCTCTaGGGTTCAAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSRWPQL*GSSPSC
Trigger: ACATGATGGACTTGAACCGCAGAGCTGAGGCCATCG...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGTGGCTGTGTTGTGGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTGGATCAGGTCTGCAATaGTGGCTTTACTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LWLCCGRSSHLGERAPMSGSGLQ*WLYFQQ
Trigger: CTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCC...ACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCCACAACACAGCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp TTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCGTTCTAGGAAGACGGTaGCTCTCTCCAGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: LPTQGFQDWVSGWLCLSSVLGRR*LSPAQT
Trigger: TGTCTGCGCTGGAGAGAGCCACCGTCTTCCTAGAAC...GGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCGGCTGGAGGGTCAGCTaGAACTCTCTTAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSGWRVS*NSLRYL
Trigger: CAAGTACCTAAGAGAGTTCCAGCTGACCCTCCAGCC...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCGGCTGGAGGGTCAGCTaGAACTCTCTTAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GVALLILQMPSSQDVIRAGWRVS*NSLRYL
Trigger: CAAGTACCTAAGAGAGTTCCAGCTGACCCTCCAGCC...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTTTCCAAAACCCGGGCTaGAGGGTCAGCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLFQNPG*RVSWNS
Trigger: AGAGTTCCAGCTGACCCTCCAGCCCGGGTTTTGGAA...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATTTCCAAAACCCGGGCTaGAGGGTCAGCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYFQNPG*RVSWNS
Trigger: AGAGTTCCAGCTGACCCTCCAGCCCGGGTTTTGGAA...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATGTGGATCCAGGCATGTaGGAGCTTCCAAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: LLILQMPSSQDVIRALQDVDPGM*ELPKPG
Trigger: CCCGGGTTTTGGAAGCTCCCACATGCCTGGATCCAC...ATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTAAGGAGGCATCAGTGTaGATCCAGGCATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLPRLGVGVALLILQMPSKEASV*IQACGS
Trigger: GCTCCCACATGCCTGGATCCACACTGATGCCTCCTT...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGTCTGAGAATGAGTCCTaGGGCCCGAACGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKSENES*GPNVGY
Trigger: GTACCCCACGTTCGGGCCCCAGGACTCATTCTCAGA...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGTAGGCGTATCCGATaGCCTCAGCTCTGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKIGCRGGFAYPPDAFFPGRRIR*PQLCGS
Trigger: TGAACCGCAGAGCTGAGGCCATCGGATACGCCTACC...TGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATTTGGGAGCCTGAGGTaGGCGGATCTCTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLFGSLR*ADLLRS
Trigger: TGATCTCAAGAGATCCGCCCACCTCAGGCTCCCAAA...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CTGTGGCTGTGTTGTGGGAGGAGCAGCCATCTAGGGGAGAGAGCCCCCATGAGTGGGTGGCAAGAACCTTaGCCCTTTATTCAACACAGT +
Preference number: 4 (lower is better)
Translates to: LWLCCGRSSHLGERAPMSGWQEP*PFIQHS
Trigger: ACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCC...ACTCATGGGGGCTCTCTCCCCTAGATGGCTGCTCCTCCCACAACACAGCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCGCTGTGGCTGTGTTGTaGGAGGAGCAGCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFAVAVL*EEQPSG
Trigger: TCCAGATGGCTGCTCCTCCCACAACACAGCCACAGC...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472572.8
CDS-3UTR CCA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCACTGGGGCAGCCTTTaGGGGCAGGAAACTGTCACA +
Preference number: 4 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLHWGSL*GQETVT
Trigger: TGTGACAGTTTCCTGCCCCCAAAGGCTGCCCCAGTG...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS-3UTR TCA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCATGCCATCCAGGTTaGTTTCAGGCAGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYPCHPG*FQAASV
Trigger: AACAGAGGCTGCCTGAAATCAACCTGGATGGCATGG...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCTGGGATCACTCAGCTTaGGGTAGTGGAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LAYSGLPRLGVGVALLILWDHSA*GSGGIS
Trigger: AGAGATCCCTCCACTACCTCAAGCTGAGTGATCCCA...GAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCTGGCGCAGAAGAGGTTaGTATAGTCCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCWRRRG*YSPGSV
Trigger: AACAGAGCCAGGACTATATCAACCTCTTCTGCGCCA...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCACGGACACTTTTTAGCTaGTCTTCCAGCACTCGGACC +
Preference number: 4 (lower is better)
Translates to: CLLRASKIGCRGGFAYPPRTLFS*SSSTRT
Trigger: GGTCCGAGTGCTGGAAGAGCAGCTAAAAAGTGTCCG...TGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTaGCCTCCAGGATCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFPGCDP*PPGSKG
Trigger: TCCCTTAGATCCTGGAGGGCACGGATCACATCCTGG...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp ATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGTGTCGGGGTGGCTTTaGTTATCCTCCAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: ILQMPSSQDVIRALQDLRVSGWL*LSSRCL
Trigger: AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACAC...CCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTGTGTCGGGGTGGCTTTaGTTATCCTCCAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLVSGWL*LSSRCL
Trigger: AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACAC...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGGATCAGGTCTGCAATaGTGGCTTTACTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFGSGLQ*WLYFQQ
Trigger: CTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCC...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TTATTCAACACAGTCTCATTGAAAGTGCTTTTCAGCCAGACGCGGTGGCTCACATGCAGCAGGGGCTCCTaGGCCCACTTCTCCCGGACA +
Preference number: 4 (lower is better)
Translates to: LFNTVSLKVLFSQTRWLTCSRGS*AHFSRT
Trigger: TGTCCGGGAGAAGTGGGCCCAGGAGCCCCTGCTGCA...TGTGAGCCACCGCGTCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTTTCCAAAACCCGGGCTaGAGGGTCAGCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLFQNPG*RVSWNS
Trigger: AGAGTTCCAGCTGACCCTCCAGCCCGGGTTTTGGAA...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCTGCACCCCCTCATTCTaGCCCAGAGGAAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFCTPSF*PRGRRA
Trigger: TGCTCTTCTTCCTCTGGGCCAGAATGAGGGGGTGCA...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp GATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTTTGGGAGCCTGAGGTaGGCGGATCTCTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: DWVSGWLCLSSRCLLPRMFGSLR*ADLLRS
Trigger: TGATCTCAAGAGATCCGCCCACCTCAGGCTCCCAAA...CATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCATGAGTGCTGGGTaGCAAGAACCTTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLPMSAG*QEPWPF
Trigger: AAAGGGCCAAGGTTCTTGCCACCCAGCACTCATGGG...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATTGGCTCTCTGTTTGCTaGGGGGTATTCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDWLSVC*GVFCQD
Trigger: ATCCTGGCAGAATACCCCCCAGCAAACAGAGAGCCA...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTTCCACAGAACATGACTaGTCCATCTGTGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFSTEHD*SICVEL
Trigger: GAGCTCTACACAGATGGACCAGTCATGTTCTGTGGA...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474471.7
3UTR CAA 72 bp TACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTaGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: YSGLPRLGVGVA*LILQMPSSQDV
Trigger: CACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp ATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGTGGCGCAGAAGAGGTTaGTATAGTCCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ILQMPSSQDVIRALQDLRWRRRG*YSPGSV
Trigger: AACAGAGCCAGGACTATATCAACCTCTTCTGCGCCA...CCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp GGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCGGCAAGAGAATTGCTTaGACCCAGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GVGVALLILQMPSSQDVIGKRIA*TQEAKV
Trigger: AACCTTTGCCTCCTGGGTTCAAGCAATTCTCTTGCC...GATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCGATGGCCTCAGCTCTaGGGTTCAAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLRWPQL*GSSPSC
Trigger: ACATGATGGACTTGAACCGCAGAGCTGAGGCCATCG...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp TCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGTGTCGGGGTGGCTTTaGTTATCCTCCAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: SKIGCRGGFAYPPDAFFPVSGWL*LSSRCL
Trigger: AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACAC...TGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCAAAATTAGCCAGGTATaGTGGCACGCTCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RGGFAYPPDAFFPGCDPCKISQV*WHAPVV
Trigger: GACTACAGGAGCGTGCCACCATACCTGGCTAATTTT...GCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp TACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGTATAATCCCACACTTTaGGAGCCTGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: YSGLPRLGVGVALLILQMYNPTL*EPEVGG
Trigger: TCCGCCCACCTCAGGCTCCCAAAGTGTGGGATTATA...CATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp GCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGGGGTGGCAAGAACCTTaGCCCTTTATTCAACACAGT +
Preference number: 4 (lower is better)
Translates to: AYSGLPRLGVGVALLILQGWQEP*PFIQHS
Trigger: ACTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCC...CTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGATTGGGTGTCGGGGTaGCTTTGCTTATCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKDWVSG*LCLSSR
Trigger: TCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp TATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGTGGCGCAGAAGAGGTTaGTATAGTCCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: YPPDAFFPGCDPCPPGSKWRRRG*YSPGSV
Trigger: AACAGAGCCAGGACTATATCAACCTCTTCTGCGCCA...CTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp TCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGCAAGAGAATTGCTTaGACCCAGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: SKIGCRGGFAYPPDAFFPGKRIA*TQEAKV
Trigger: AACCTTTGCCTCCTGGGTTCAAGCAATTCTCTTGCC...TGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR GCA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCAGACAGGATCAGGTCTaGAATGGTGGCTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: GVALLILQMPSSQDVIRARQDQV*NGGFTF
Trigger: GAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCT...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp TTATTCAACACAGTCTCATTGAAAGTGCTTTTCAGCCAGACGCGGTGGCTCACACCAAGAAGCCTGGGGTaGCCTGGGCAAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: LFNTVSLKVLFSQTRWLTPRSLG*PGQRTL
Trigger: CAGAGTCCTTTGCCCAGGCCACCCCAGGCTTCTTGG...TGTGAGCCACCGCGTCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR CCA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTGGATCAGGTCTGCAATaGTGGCTTTACTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLPRLGVGVALLILQMPSGSGLQ*WLYFQQ
Trigger: CTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCC...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CCA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATAAAATTAGCCAGGTATaGTGGCACGCTCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDKISQV*WHAPVV
Trigger: GACTACAGGAGCGTGCCACCATACCTGGCTAATTTT...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CCA 90 bp CCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTGGAGGAGCAGCCATCTaGAAATTGTTTTTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PCLLRASKIGCRGGFAYPGGAAI*KLFFSP
Trigger: AGGCGAGAAAAACAATTTCCAGATGGCTGCTCCTCC...AGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472572.8
CDS-3UTR GCA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATAGACAGGATCAGGTCTaGAATGGTGGCTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDRQDQV*NGGFTF
Trigger: GAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCT...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR GCA 90 bp GGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCAGACAGGATCAGGTCTaGAATGGTGGCTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: GVGVALLILQMPSSQDVIRQDQV*NGGFTF
Trigger: GAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCT...GATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR TCA 90 bp AGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTCAACACAGTCTCATTaGAAGTGCTTTTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RASKIGCRGGFAYPPDAFSTQSH*KCFSAR
Trigger: TCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGA...GAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
3UTR CAA 72 bp GGCAAGAACCTTGGCCCTTTATTCAACACAGTCTCATaGAAAGTGCTTTTCAGCCAGACGCGGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: GKNLGPLFNTVS*KVLFSQTRWLT
Trigger: TGTGAGCCACCGCGTCTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAATAAAGGGCCAAGGTTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS CCA 90 bp CCTCCCACCTCCTTCCCACCTCCCCCTGGCAGACATGAAGACAAGTaGCCCGGCAGGGCTGCCAAGAAGCCTGGGGTGGCCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PPTSFPPPPGRHEDK*PGRAAKKPGVAWAK
Trigger: CTTTGCCCAGGCCACCCCAGGCTTCTTGGCAGCCCTGCCGGGCCACTTGTCTTCATGTCTGCCAGGGGGAGGTGGGAAGGAGGTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315997.5
CDS-3UTR CAA 90 bp CGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGCGTCTCAGCGGCTGCTaGGTGGTGGCGGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: RPSQRLLGGGGVDGCGSLRLSGC*VVAVWM
Trigger: CATCCACACCGCCACCACCAAGCAGCCGCTGAGACG...CAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CAA 90 bp GTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTCCACCTACCCTGGCCTaGCCTACTCAGGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VRLSGCLVVAVWMGVALCPPTLA*PTQGFQ
Trigger: TTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGTGG...ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CAA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCCGTCTCAGCGGCTGCTaGGTGGTGGCGGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSRLSGC*VVAVWM
Trigger: CATCCACACCGCCACCACCAAGCAGCCGCTGAGACG...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTGAGCAGCCGGGCTaGGTCATGAGGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYPEQPG*VMRLLQ
Trigger: CTGCAGGAGCCTCATGACCAAGCCCGGCTGCTCAGG...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCCTGAGCAGCCGGGCTaGGTCATGAGGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GVGVALLILQMPSSQDVIPEQPG*VMRLLQ
Trigger: CTGCAGGAGCCTCATGACCAAGCCCGGCTGCTCAGG...GATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATCCTGAGCAGCCGGGCTaGGTCATGAGGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDPEQPG*VMRLLQ
Trigger: CTGCAGGAGCCTCATGACCAAGCCCGGCTGCTCAGG...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GCAGCTGGCATGGAACCGTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGGCAAGAACCTaGGCCCTTTATTCAACACAG +
Preference number: 5 (lower is better)
Translates to: AAGMEPSVSAAAWWWRCGWVART*ALYSTQ
Trigger: CTGTGTTGAATAAAGGGCCAAGGTTCTTGCCACCCA...TCCACACCGCCACCACCAAGCAGCCGCTGAGACGGACGGTTCCATGCCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS CCA 90 bp AGACGGTGGCTCTCTCCAGCGCAGACAGGATCAGGTCTGCAATGGTaGCTTTACTTTCAGCAGTGTCCAGCCCAGGCAGTGAGGAGGACC +
Preference number: 5 (lower is better)
Translates to: RRWLSPAQTGSGLQW*LYFQQCPAQAVRRT
Trigger: GGTCCTCCTCACTGCCTGGGCTGGACACTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCTGCGCTGGAGAGAGCCACCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 90 bp GGAAGACGGTGGCTCTCTCCAGCGCAGACAGGATCAGGTCTGCAATaGTGGCTTTACTTTCAGCAGTGTCCAGCCCAGGCAGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GRRWLSPAQTGSGLQ*WLYFQQCPAQAVRR
Trigger: CCTCCTCACTGCCTGGGCTGGACACTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCTGCGCTGGAGAGAGCCACCGTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 90 bp GAACGTGGGGTACACCAAGGAGGCATCAGTGTGGATCCAGGCATGTaGGAGCTTCCAAAACCCGGGCTGGAGGGTCAGCTGGAACTCTCT +
Preference number: 5 (lower is better)
Translates to: ERGVHQGGISVDPGM*ELPKPGLEGQLELS
Trigger: AGAGAGTTCCAGCTGACCCTCCAGCCCGGGTTTTGGAAGCTCCCACATGCCTGGATCCACACTGATGCCTCCTTGGTGTACCCCACGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 90 bp AGCTGCACCAGGCACACGTCACTTCTCTCCTCTGAGAATGAGTCCTaGGGCCCGAACGTGGGGTACACCAAGGAGGCATCAGTGTGGATC +
Preference number: 5 (lower is better)
Translates to: SCTRHTSLLSSENES*GPNVGYTKEASVWI
Trigger: GATCCACACTGATGCCTCCTTGGTGTACCCCACGTTCGGGCCCCAGGACTCATTCTCAGAGGAGAGAAGTGACGTGTGCCTGGTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS-3UTR CAA 90 bp TTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCCGTCTCAGCGGCTGCTaGGTGGTGGCGGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: FQDWVSGWLCLSSRCLLPRLSGC*VVAVWM
Trigger: CATCCACACCGCCACCACCAAGCAGCCGCTGAGACG...GGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCCCACCTACCCTGGCCTaGCCTACTCAGGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSPPTLA*PTQGFQ
Trigger: TTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGTGG...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCGGTGTCGGGGTGGCTTaGCTTATCCTCCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: ALPTQGFQDWVSGWLCLSGVGVA*LILQMP
Trigger: AGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC...GGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp CTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCAGGGCTTCCAAGATaGGGTGTCGGGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LALPTQGFQDWVSGWLCLSGLPR*GVGVAL
Trigger: CAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGA...TAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCTCAGGGCTTCCAAGATaGGGTGTCGGGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GVALLILQMPSSQDVIRASGLPR*GVGVAL
Trigger: CAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGA...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp AGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTCACTGGGGCAGCCTTaGGGGGCAGGAAACTGTCAC +
Preference number: 5 (lower is better)
Translates to: RASKIGCRGGFAYPPDAFSLGQP*GAGNCH
Trigger: GTGACAGTTTCCTGCCCCCAAAGGCTGCCCCAGTGA...GAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS TCA 90 bp GGAGGGTCAGCTGGAACTCTCTTAGGTACTTGGGATCACTCAGCTTaGGGTAGTGGAGGGATCTCTGGATGGCAGCCTCCAGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GGSAGTLLGTWDHSA*GSGGISGWQPPASP
Trigger: GGGAGAAGCTGGAGGCTGCCATCCAGAGATCCCTCCACTACCTCAAGCTGAGTGATCCCAAGTACCTAAGAGAGTTCCAGCTGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS TCA 90 bp CCTCAGCTCTGCGGTTCAAGTCCATCATGTTGGCGCAGAAGAGGTTaGTATAGTCCTGGCTCTGTTGGAGTGGTCCCTGTGTGCACCCCC +
Preference number: 5 (lower is better)
Translates to: PQLCGSSPSCWRRRG*YSPGSVGVVPVCTP
Trigger: GGGGGTGCACACAGGGACCACTCCAACAGAGCCAGGACTATATCAACCTCTTCTGCGCCAACATGATGGACTTGAACCGCAGAGCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000592343.1
CDS-3UTR CAA 90 bp GATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGGGTGTCGGGGTGGCTTaGCTTATCCTCCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: DWVSGWLCLSSRCLLPRMGVGVA*LILQMP
Trigger: AGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC...CATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCGGTGTCGGGGTGGCTTaGCTTATCCTCCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: GVGVALLILQMPSSQDVIGVGVA*LILQMP
Trigger: AGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC...GATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp TGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATTCAGGGCTTCCAAGATaGGGTGTCGGGGTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: WPCLLRASKIGCRGGFAYSGLPR*GVGVAL
Trigger: CAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGA...ATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp AGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATCCACCTACCCTGGCCTaGCCTACTCAGGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RLGVGVALLILQMPSSQDPPTLA*PTQGFQ
Trigger: TTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGGTGG...ATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS CCA 90 bp CATTCCACAGAACATGACTGGTCCATCTGTGTAGAGCTCCGTCACTaGGGCAGCCTTTGGGGGCAGGAAACTGTCACACAGTGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: HSTEHDWSICVELRH*GSLWGQETVTQWQV
Trigger: TACCTGCCACTGTGTGACAGTTTCCTGCCCCCAAAGGCTGCCCCAGTGACGGAGCTCTACACAGATGGACCAGTCATGTTCTGTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS-3UTR CAA 90 bp GGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCACCATGCCATCCAGGTaGATTTCAGGCAGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GVALLILQMPSSQDVIRATMPSR*ISGSLC
Trigger: ACAGAGGCTGCCTGAAATCAACCTGGATGGCATGGT...GGCACGGATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp CAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTATAGTCCTGGCTCTGTaGGAGTGGTCCCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: QGFQDWVSGWLCLSSRCLIVLAL*EWSLCA
Trigger: TGCACACAGGGACCACTCCAACAGAGCCAGGACTAT...AAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp AGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCATAGTCCTGGCTCTGTaGGAGTGGTCCCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: RASKIGCRGGFAYPPDAFIVLAL*EWSLCA
Trigger: TGCACACAGGGACCACTCCAACAGAGCCAGGACTAT...GAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GTCCGTCTCAGCGGCTGCTTGGTGGTGGCGGTGTGGATGGGTGTGGCTCTCTGTTTCAACACAGTCTCATaGAAAGTGCTTTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VRLSGCLVVAVWMGVALCFNTVS*KVLFSQ
Trigger: CTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAA...ACAGAGAGCCACACCCATCCACACCGCCACCACCAAGCAGCCGCTGAGACGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CAA 90 bp GGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTACCATGCCATCCAGGTaGATTTCAGGCAGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GLPRLGVGVALLILQMPSTMPSR*ISGSLC
Trigger: ACAGAGGCTGCCTGAAATCAACCTGGATGGCATGGT...AGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp AGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATATAGTCCTGGCTCTGTaGGAGTGGTCCCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: RLGVGVALLILQMPSSQDIVLAL*EWSLCA
Trigger: TGCACACAGGGACCACTCCAACAGAGCCAGGACTAT...ATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp CCTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTGCGAGAATCTGGAAATaGTTTTTCTCGCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PTLALPTQGFQDWVSGWLARIWK*FFSPLH
Trigger: GTGAAGAGGCGAGAAAAACAATTTCCAGATTCTCGC...AAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CAA 90 bp TACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGACCATGCCATCCAGGTaGATTTCAGGCAGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: YSGLPRLGVGVALLILQMTMPSR*ISGSLC
Trigger: ACAGAGGCTGCCTGAAATCAACCTGGATGGCATGGT...CATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp CTACCCTGGCCTTGCCTACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTTTCAAGTCCATCATGTaGGCGCAGAAGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: LPWPCLLRASKIGCRGGFFKSIM*AQKRLI
Trigger: TATCAACCTCTTCTGCGCCAACATGATGGACTTGAA...AAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTAGGCAAGGCCAGGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp CTCCAGATGCCTTCTTCCCAGGATGTGATCCGTGCCCTCCAGGATCTAAGGGATAACTCTCTTAGGTACTaGGGATCACTCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LQMPSSQDVIRALQDLRDNSLRY*GSLSLR
Trigger: CCTCAAGCTGAGTGATCCCAAGTACCTAAGAGAGTT...ATCCCTTAGATCCTGGAGGGCACGGATCACATCCTGGGAAGAAGGCATCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp TACTCAGGGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGAACTCTCTTAGGTACTaGGGATCACTCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: YSGLPRLGVGVALLILQMNSLRY*GSLSLR
Trigger: CCTCAAGCTGAGTGATCCCAAGTACCTAAGAGAGTT...CATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCCCTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATGTGATCGCGAGAATCTGGAAATaGTTTTTCTCGCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GVGVALLILQMPSSQDVIARIWK*FFSPLH
Trigger: GTGAAGAGGCGAGAAAAACAATTTCCAGATTCTCGC...GATCACATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS-3UTR CAA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCGCAGCCATCTGGAAATaGTTTTTCTCGCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFAAIWK*FFSPLH
Trigger: GTGAAGAGGCGAGAAAAACAATTTCCAGATGGCTGC...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472572.8
CDS-3UTR CAA 90 bp AGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCCCAGGATTTCAAGTCCATCATGTaGGCGCAGAAGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: RLGVGVALLILQMPSSQDFKSIM*AQKRLI
Trigger: TATCAACCTCTTCTGCGCCAACATGATGGACTTGAA...ATCCTGGGAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTTTCAAGTCCATCATGTaGGCGCAGAAGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLFKSIM*AQKRLI
Trigger: TATCAACCTCTTCTGCGCCAACATGATGGACTTGAA...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
CDS-3UTR CAA 90 bp GCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTCGGATGCCCAGTTACATaGTTTTCCATGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: ASKIGCRGGFAYPPDAFFGCPVT*FSMKMS
Trigger: GGACATCTTCATGGAAAACAATGTAACTGGGCATCC...GAAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS-3UTR CAA 90 bp GGCTTCCAAGATTGGGTGTCGGGGTGGCTTTGCTTATCCTCCAGATGCCTTCTTTTCAACACAGTCTCATaGAAAGTGCTTTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GFQDWVSGWLCLSSRCLLFNTVS*KVLFSQ
Trigger: CTGGCTGAAAAGCACTTTCAATGAGACTGTGTTGAA...AAGAAGGCATCTGGAGGATAAGCAAAGCCACCCCGACACCCAATCTTGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315997.5
ENST00000474471.7
CDS CCA 72 bp GGCCCGAACGTGGGGTACACCAAGGAGGCATCAGTGTaGATCCAGGCATGTGGGAGCTTCCAAAACCCGGGC +
Preference number: 6 (lower is better)
Translates to: GPNVGYTKEASV*IQACGSFQNPG
Trigger: GCCCGGGTTTTGGAAGCTCCCACATGCCTGGATCCACACTGATGCCTCCTTGGTGTACCCCACGTTCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 72 bp GTACACCAAGGAGGCATCAGTGTGGATCCAGGCATGTaGGAGCTTCCAAAACCCGGGCTGGAGGGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: VHQGGISVDPGM*ELPKPGLEGQL
Trigger: CAGCTGACCCTCCAGCCCGGGTTTTGGAAGCTCCCACATGCCTGGATCCACACTGATGCCTCCTTGGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS GCA 72 bp GACGGTGGCTCTCTCCAGCGCAGACAGGATCAGGTCTaGAATGGTGGCTTTACTTTCAGCAGTGTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: DGGSLQRRQDQV*NGGFTFSSVQP
Trigger: GGGCTGGACACTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCTGCGCTGGAGAGAGCCACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 72 bp TTCTCTCCTCTGAGAATGAGTCCTGGGGCCCGAACGTaGGGTACACCAAGGAGGCATCAGTGTGGATCCAGG +
Preference number: 6 (lower is better)
Translates to: FSPLRMSPGART*GTPRRHQCGSR
Trigger: CCTGGATCCACACTGATGCCTCCTTGGTGTACCCCACGTTCGGGCCCCAGGACTCATTCTCAGAGGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 72 bp AGGCACACGTCACTTCTCTCCTCTGAGAATGAGTCCTaGGGCCCGAACGTGGGGTACACCAAGGAGGCATCA +
Preference number: 6 (lower is better)
Translates to: RHTSLLSSENES*GPNVGYTKEAS
Trigger: TGATGCCTCCTTGGTGTACCCCACGTTCGGGCCCCAGGACTCATTCTCAGAGGAGAGAAGTGACGTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 72 bp CTCTCTCCAGCGCAGACAGGATCAGGTCTGCAATGGTaGCTTTACTTTCAGCAGTGTCCAGCCCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LSPAQTGSGLQW*LYFQQCPAQAV
Trigger: CACTGCCTGGGCTGGACACTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCTGCGCTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 72 bp TGGCTCTCTCCAGCGCAGACAGGATCAGGTCTGCAATaGTGGCTTTACTTTCAGCAGTGTCCAGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: WLSPAQTGSGLQ*WLYFQQCPAQA
Trigger: TGCCTGGGCTGGACACTGCTGAAAGTAAAGCCACCATTGCAGACCTGATCCTGTCTGCGCTGGAGAGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS CCA 72 bp AAGCCACCCAGGGCTGCCACTGCTGTGGCTGTGTTGTaGGAGGAGCAGCCATCTGGAAATTGTTTTTCTCGC +
Preference number: 6 (lower is better)
Translates to: KPPRAATAVAVL*EEQPSGNCFSR
Trigger: GCGAGAAAAACAATTTCCAGATGGCTGCTCCTCCCACAACACAGCCACAGCAGTGGCAGCCCTGGGTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472572.8
ENST00000586629.5
CDS CCA 72 bp GAACATGACTGGTCCATCTGTGTAGAGCTCCGTCACTaGGGCAGCCTTTGGGGGCAGGAAACTGTCACACAG +
Preference number: 6 (lower is better)
Translates to: EHDWSICVELRH*GSLWGQETVTQ
Trigger: CTGTGTGACAGTTTCCTGCCCCCAAAGGCTGCCCCAGTGACGGAGCTCTACACAGATGGACCAGTCATGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS CAA 72 bp GTTGGCGCAGAAGAGGTTGATATAGTCCTGGCTCTGTaGGAGTGGTCCCTGTGTGCACCCCCTCATTCTGGC +
Preference number: 6 (lower is better)
Translates to: VGAEEVDIVLAL*EWSLCAPPHSG
Trigger: GCCAGAATGAGGGGGTGCACACAGGGACCACTCCAACAGAGCCAGGACTATATCAACCTCTTCTGCGCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000592343.1
CDS CAA 72 bp GTCCATCTGTGTAGAGCTCCGTCACTGGGGCAGCCTTaGGGGGCAGGAAACTGTCACACAGTGGCAGGTAAA +
Preference number: 6 (lower is better)
Translates to: VHLCRAPSLGQP*GAGNCHTVAGK
Trigger: TTTACCTGCCACTGTGTGACAGTTTCCTGCCCCCAAAGGCTGCCCCAGTGACGGAGCTCTACACAGATGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS CCA 72 bp TCCATCTGTGTAGAGCTCCGTCACTGGGGCAGCCTTTaGGGGCAGGAAACTGTCACACAGTGGCAGGTAAAA +
Preference number: 6 (lower is better)
Translates to: SICVELRHWGSL*GQETVTQWQVK
Trigger: TTTTACCTGCCACTGTGTGACAGTTTCCTGCCCCCAAAGGCTGCCCCAGTGACGGAGCTCTACACAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474471.7
CDS TCA 72 bp GCTGGAACTCTCTTAGGTACTTGGGATCACTCAGCTTaGGGTAGTGGAGGGATCTCTGGATGGCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: AGTLLGTWDHSA*GSGGISGWQPP
Trigger: TGGAGGCTGCCATCCAGAGATCCCTCCACTACCTCAAGCTGAGTGATCCCAAGTACCTAAGAGAGTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000591875.1
CDS TCA 72 bp TGCGGTTCAAGTCCATCATGTTGGCGCAGAAGAGGTTaGTATAGTCCTGGCTCTGTTGGAGTGGTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: CGSSPSCWRRRG*YSPGSVGVVPV
Trigger: CACAGGGACCACTCCAACAGAGCCAGGACTATATCAACCTCTTCTGCGCCAACATGATGGACTTGAACCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315997.5
ENST00000472572.8
ENST00000474471.7
ENST00000592343.1