RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C16ORF82 (Homo sapiens)

Ensembl gene IDs: ENSG00000234186

Ensembl transcript IDs: ENST00000505035.3

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTaGCATCCAGCCGGACGCTCTGACGGCTGCTGGCCTGGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: CPPARWCGCSACFGH*HPAGRSDGCWPGWR
Trigger: CCTCCACCCAGGCCAGCAGCCGTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp CACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTaGTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACG +
Preference number: 1 (lower is better)
Translates to: HKGMHTWAGCSPVVT*SLVFTLPPVLSSCT
Trigger: CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp CTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTaGCTGCTCTGCCTGTTTTGGGCACTGCCATCCAGCCGGACGCTC +
Preference number: 1 (lower is better)
Translates to: LVFTLPPVLSSCTLV*LLCLFWALPSSRTL
Trigger: GAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp TTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTaGTCTGCCTGTTTTGGGCACTGCCATCCAGCCGGACGCTCTGAC +
Preference number: 1 (lower is better)
Translates to: FSRCRPSCPPARWCG*SACFGHCHPAGRSD
Trigger: GTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp GCTGCTGGAGAGGATTCTCACAAAGGCATGCACACCTGGGCAGGCTaGTCCCCCGTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCC +
Preference number: 1 (lower is better)
Translates to: AAGEDSHKGMHTWAG*SPVVTCSLVFTLPP
Trigger: GGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAATCCTCTCCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp GCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTaGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCAGCCGGA +
Preference number: 1 (lower is better)
Translates to: AHWFSRCRPSCPPAR*CGCSACFGHCHPAG
Trigger: TCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp GTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTaGACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCC +
Preference number: 1 (lower is better)
Translates to: VTCSLVFTLPPVLSS*TLVWLLCLFWALPS
Trigger: GGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp GCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACAAAATaGTCCAGAGCTTCCCCATCGCAGCTGTTCCCGGCTGGGTTGGGC +
Preference number: 1 (lower is better)
Translates to: AETSAFPSTETVLTK*SRASPSQLFPAGLG
Trigger: GCCCAACCCAGCCGGGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 90 bp ATTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTaGCCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: ILTKACTPGQAAPPW*PAHWFSRCRPSCPP
Trigger: AGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 90 bp GTGTGCCGGGGGCATCCCTGGCTGCTCCTGATGATCCTTCTCTGGTaGCAGTCACTTAGTCTGGACTCCTTGGGGGAGCTGAGAGTCGTG +
Preference number: 1 (lower is better)
Translates to: VCRGHPWLLLMILLW*QSLSLDSLGELRVV
Trigger: CACGACTCTCAGCTCCCCCAAGGAGTCCAGACTAAGTGACTGTCACCAGAGAAGGATCATCAGGAGCAGCCAGGGATGCCCCCGGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp GTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTaGTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCCGG +
Preference number: 1 (lower is better)
Translates to: VRDGQRLRLSHPPRR*SQNAPELPHRSCSR
Trigger: CCGGGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp GCTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCCGGCTaGGTTGGGCTCTGTCACCATGAAGTGCTTCTCACGGCATTGTCC +
Preference number: 1 (lower is better)
Translates to: AHKMLQSFPIAAVPG*VGLCHHEVLLTALS
Trigger: GGACAATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCAACCCAGCCGGGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp CCTGTGTTTGCTGGGCCTGTGTGTTGTTTTCTGGGAGACTCTGGCTaGTGGAGAGGATTCTCACAAAGGCATGCACACCTGGGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: PVFAGPVCCFLGDSG*WRGFSQRHAHLGRL
Trigger: CAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp GTGTTTGCTGGGCCTGTGTGTTGTTTTCTGGGAGACTCTGGCTGCTaGAGAGGATTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTC +
Preference number: 1 (lower is better)
Translates to: VFAGPVCCFLGDSGC*RGFSQRHAHLGRLL
Trigger: GAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp GCAGCCTGTGTTTGCTGGGCCTGTGTGTTGTTTTCTGGGAGACTCTaGCTGCTGGAGAGGATTCTCACAAAGGCATGCACACCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: AACVCWACVLFSGRL*LLERILTKACTPGQ
Trigger: CTGCCCAGGTGTGCATGCCTTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAACACAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp CTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTaGTTGGCCAGGATGAAGTTTCATGTGGATGTGGCTCTCCACGCA +
Preference number: 1 (lower is better)
Translates to: LVLLRAVTMMDRVWC*LARMKFHVDVALHA
Trigger: TGCGTGGAGAGCCACATCCACATGAAACTTCATCCTGGCCAAGCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp TTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTaGTGCTTGGCCAGGATGAAGTTTCATGTGGATGTGGCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: LLVLLRAVTMMDRVW*CLARMKFHVDVALH
Trigger: GTGGAGAGCCACATCCACATGAAACTTCATCCTGGCCAAGCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp TGGGTTGGGCTCTGTCACCATGAAGTGCTTCTCACGGCATTGTCCTaGCATCGTAGTCACTGTCTCAACCATCTGAACACAGGATGGCTC +
Preference number: 1 (lower is better)
Translates to: WVGLCHHEVLLTALS*HRSHCLNHLNTGWL
Trigger: GAGCCATCCTGTGTTCAGATGGTTGAGACAGTGACTACGATGGCAGGACAATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp CGTCAGCGTTTGCCATCGAGAACATCTGTCGCCACTGATGAGTTTTaGTACAGGGGGTCCCACCAGGATGCTGCTGACTACAGATGGTTT +
Preference number: 1 (lower is better)
Translates to: RQRLPSRTSVATDEF*YRGSHQDAADYRWF
Trigger: AAACCATCTGTAGTCAGCAGCATCCTGGTGGGACCCCCTGTACCAAAACTCATCAGTGGCGACAGATGTTCTCGATGGCAAACGCTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 90 bp TGTGGATGTGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTaGTATGGACAGTCCCAACCATGGTTGCAGCTTGTTTCTTCTGAG +
Preference number: 1 (lower is better)
Translates to: CGCGSPRMALTADGS*YGQSQPWLQLVSSE
Trigger: CTCAGAAGAAACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp TTCCTACTTGTTTTGGGAATATCCACTCTGGGTGCAGCCTGTGTTTaGTGGGCCTGTGTGTTGTTTTCTGGGAGACTCTGGCTGCTGGAG +
Preference number: 1 (lower is better)
Translates to: FLLVLGISTLGAACV*WACVLFSGRLWLLE
Trigger: CTCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAACACAGGCTGCACCCAGAGTGGATATTCCCAAAACAAGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp TGCTTGGCCAGGATGAAGTTTCATGTGGATGTGGCTCTCCACGCATaGCGCTCACTGCAGATGGTTCTTGATATGGACAGTCCCAACCAT +
Preference number: 1 (lower is better)
Translates to: CLARMKFHVDVALHA*RSLQMVLDMDSPNH
Trigger: ATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATCCACATGAAACTTCATCCTGGCCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp CGCTCACTGCAGATGGTTCTTGATATGGACAGTCCCAACCATGGTTaGAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCA +
Preference number: 1 (lower is better)
Translates to: RSLQMVLDMDSPNHG*SLFLLSSSWLVLVA
Trigger: TGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp AGTTTCATGTGGATGTGGCTCTCCACGCATGGCGCTCACTGCAGATaGTTCTTGATATGGACAGTCCCAACCATGGTTGCAGCTTGTTTC +
Preference number: 1 (lower is better)
Translates to: SFMWMWLSTHGAHCR*FLIWTVPTMVAACF
Trigger: GAAACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATCCACATGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp TCAGCTTTCCTTCTGGTACCTAGTGGATGTCTTCACGACAGTCTCTaGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGTGAG +
Preference number: 1 (lower is better)
Translates to: SAFLLVPSGCLHDSL*PLFLCGQTHFNVCE
Trigger: CTCACAGACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCACTAGGTACCAGAAGGAAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp GACAGTCCCAACCATGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTaGCTGGTGTTGGTTGCAGATGGCATTCATCATTTAGGATGGTTT +
Preference number: 1 (lower is better)
Translates to: DSPNHGCSLFLLSSS*LVLVADGIHHLGWF
Trigger: AAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTTGGGACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 90 bp TTCTTGATATGGACAGTCCCAACCATGGTTGCAGCTTGTTTCTTCTaGGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTCATCATT +
Preference number: 1 (lower is better)
Translates to: FLIWTVPTMVAACFF*AHRGWCWLQMAFII
Trigger: AATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 90 bp TGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTaGAGATGGCATTCATCATTTAGGATGGTTTCATCATGGAAGGTT +
Preference number: 1 (lower is better)
Translates to: WLQLVSSELIVAGVG*RWHSSFRMVSSWKV
Trigger: AACCTTCCATGATGAAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp CAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATaGCATTCATCATTTAGGATGGTTTCATCATGGAAGGTTCTAACT +
Preference number: 1 (lower is better)
Translates to: QLVSSELIVAGVGCR*HSSFRMVSSWKVLT
Trigger: AGTTAGAACCTTCCATGATGAAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 90 bp AAATGGGATTACCCACTGATGGTTGACACAGTCAGTGTGTGCTTTTaGAAACACCTTTCCTACTTGTTTTGGGAATATCCACTCTGGGTG +
Preference number: 1 (lower is better)
Translates to: KWDYPLMVDTVSVCF*KHLSYLFWEYPLWV
Trigger: CACCCAGAGTGGATATTCCCAAAACAAGTAGGAAAGGTGTTTTCAAAAGCACACACTGACTGTGTCAACCATCAGTGGGTAATCCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 90 bp CTGCTGACTACAGATGGTTTTGCCATTGATGGATCTTGTTATAGATaGCTTGTCACTGAAGTTCACAGTCGATGTCATTACTCTTCGCTG +
Preference number: 1 (lower is better)
Translates to: LLTTDGFAIDGSCYR*LVTEVHSRCHYSSL
Trigger: CAGCGAAGAGTAATGACATCGACTGTGAACTTCAGTGACAAGCCATCTATAACAAGATCCATCAATGGCAAAACCATCTGTAGTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp GCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTaGGGCACTGCCATCCAGCCGGACGCTCTGACGGCTGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: ARLVLLHAGVAALPV*GTAIQPDALTAAGL
Trigger: CAGGCCAGCAGCCGTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp TGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCACTGGTTTTCACGTaGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: WAGCSPVVTCSLVFT*PPVLSSCTLVWLLC
Trigger: GCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGTCCAGCCGGACGCTCTaGCGGCTGCTGGCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: RPLMFSLDLVPVCRGHPWSSRTL*RLLAWV
Trigger: CACCCAGGCCAGCAGCCGTCAGAGCGTCCGGCTGGA...CCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCTGTCCTCCTGCACGCTaGTGTGGCTGCTCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: FSQRHAHLGRLLPRGDLLCPPAR*CGCSAC
Trigger: ACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA...GAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGGCTGCTCCCCCGTGGTaGCCTGCTCACTGGTTTTCA +
Preference number: 2 (lower is better)
Translates to: ASSKRRAETSAFPSTETVAAPPW*PAHWFS
Trigger: TGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGC...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TTTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATGGACAGGATGCTGCTaGCGCTGCCGCTGCCGGGCA +
Preference number: 2 (lower is better)
Translates to: FTPPSNVLTRPSPCVPGAWTGCC*RCRCRA
Trigger: TGCCCGGCAGCGGCAGCGGCAGCAGCATCCTGTCCA...TGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGACGCTGGACAGGATGCTaGTGCCGCTGCCGCTGCCGG +
Preference number: 2 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRRWTGC*CRCRCR
Trigger: CCGGCAGCGGCAGCGGCAGCAGCATCCTGTCCAGCG...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp CCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCCCCGTCTTGTCCTCCTaGACGCTGGTGTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PPRRCSQNAPELPHRSCSPVLSS*TLVWLL
Trigger: GAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGG...GGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGCTTCCCCCGTGGTGACCTaGTCACTGGTTTTCACGTTG +
Preference number: 2 (lower is better)
Translates to: LGELRVVKVLRVHRGCLASPVVT*SLVFTL
Trigger: CAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGA...AGCAAGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTGGAGACTCTGGCTGCTaGAGAGGATTCTCACAAAGG +
Preference number: 2 (lower is better)
Translates to: LLGGAESREGAPCAPWLSGDSGC*RGFSQR
Trigger: CCTTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCC...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAGTGGCTCTCCACGCATaGCGCTCACTGCAGATGGTT +
Preference number: 2 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRVALHA*RSLQMV
Trigger: AACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCAC...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp ACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCCGGCTGGGTaGGGCTCTGTCACCATGAAGTGCTTCTCACGGCATTGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TKCSRASPSQLFPAG*GSVTMKCFSRHCPA
Trigger: GGCAGGACAATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCAACCCAGCCGGGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATTGCTCACCTTGTAGGTaGGGGCACTGCTGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHCSPCR*GHCCPS
Trigger: GCTTGGGCAGCAGTGCCCTCACCTACAAGGTGAGCA...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATGCACGCTGGTGTGGCTaGTCTGCCTGTTTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHARWCG*SACFGH
Trigger: GTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGC...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCACACCTGGGCAGGCTaGTCCCCCGTGGTGACCTGC +
Preference number: 2 (lower is better)
Translates to: WMSSRQSLASFPLWADSLHTWAG*SPVVTC
Trigger: GCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTG...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGCTCTGCTACATGTGGCCTaGCCACTGATGCTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: LGELRVVKVLRVHRGCLALLHVA*PLMLVA
Trigger: AGCAACAAGCATCAGTGGGCAGGCCACATGTAGCAG...AGCAAGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGAGGGTGGAGGGAAGGCTaGCTGTGGAAGTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRGWREG*LWKSAA
Trigger: GGCTGCTGACTTCCACAGCCAGCCTTCCCTCCACCC...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTCTTCTGAGCTCATCGTaGCTGGTGTTGGTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: LLGGAESREGAPCAPWLSLLSSS*LVLVAD
Trigger: ATCTGCAACCAACACCAGCCACGATGAGCTCAGAAG...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp ACTGACTGTGTTCTCAGGATAGGCGGTGCTCAGCATAGATCCTTCCTGCTACATGGACGCTCTGACGGCTaGTGGCCTGGGTGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: TDCVLRIGGAQHRSFLLHGRSDG*WPGWRE
Trigger: TTCCCTCCACCCAGGCCAGCAGCCGTCAGAGCGTCC...ATGTAGCAGGAAGGATCTATGCTGAGCACCGCCTATCCTGAGAACACAGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp GTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCTaGGCCAGGATGAAGTTTCATGTGGATGTGGCTCTCCACGCATGG +
Preference number: 2 (lower is better)
Translates to: VLLRAVTMMDRVWCC*ARMKFHVDVALHAW
Trigger: CCATGCGTGGAGAGCCACATCCACATGAAACTTCATCCTGGCCAAGCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp CCCGGCTGGGTTGGGCTCTGTCACCATGAAGTGCTTCTCACGGCATaGTCCTGCCATCGTAGTCACTGTCTCAACCATCTGAACACAGGA +
Preference number: 2 (lower is better)
Translates to: PGWVGLCHHEVLLTA*SCHRSHCLNHLNTG
Trigger: TCCTGTGTTCAGATGGTTGAGACAGTGACTACGATGGCAGGACAATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCAACCCAGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp TTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGCTTTACCCACTGATGGTTaGCACAGTCAGTGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: LGELRVVKVLRVHRGCLALPTDG*HSQCVL
Trigger: AAGCACACACTGACTGTGTCAACCATCAGTGGGTAA...AGCAAGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGACTGCAGATGGTTCTTaGTATGGACAGTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: ASSKRRAETSAFPSTETVTADGS*YGQSQP
Trigger: TGGTTGGGACTGTCCATATCAAGAACCATCTGCAGT...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp GGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCATGGACAGAGTGTGGTaGTGCTTGGCCAGGATGAAG +
Preference number: 2 (lower is better)
Translates to: GFSASSKRRAETSAFPSTMDRVW*CLARMK
Trigger: CTTCATCCTGGCCAAGCAGCACCACACTCTGTCCAT...GGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGCACTAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTAAAGGCATGCACACCTaGGCAGGCTGCTCCCCCGTG +
Preference number: 2 (lower is better)
Translates to: WMSSRQSLASFPLWADSLKGMHT*AGCSPV
Trigger: CACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTT...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp GTCTTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCGCCACTGATGAGTTTTaGTACAGGGGGTCCCACCAG +
Preference number: 2 (lower is better)
Translates to: VLLVLLRAVTMMDRVWCCATDEF*YRGSHQ
Trigger: CTGGTGGGACCCCCTGTACCAAAACTCATCAGTGGC...GCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp CCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCCATCTGAACACAGGATaGCTCCTGGCCTCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: PPRRCSQNAPELPHRSCSHLNTG*LLASFL
Trigger: AAGAAAGGAGGCCAGGAGCCATCCTGTGTTCAGATG...GGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp GATGTGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTGATATGGACAGTCACTGGTTTTCACGTTaGCGCCCGTCTTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: DVALHAWRSLQMVLDMDSHWFSR*RPSCPP
Trigger: AGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTG...ACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp GAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTCTGGGAGACTCTGGCTaGTGGAGAGGATTCTCACAA +
Preference number: 2 (lower is better)
Translates to: ETSAFPSTETVLTKCSRALGDSG*WRGFSQ
Trigger: TTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAG...AGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTAGGATGGTTTCATCATaGAAGGTTCTAACTCGTGAC +
Preference number: 2 (lower is better)
Translates to: LLGGAESREGAPCAPWLSRMVSS*KVLTRD
Trigger: GTCACGAGTTAGAACCTTCCATGATGAAACCATCCT...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp GTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTGCCGGGGGCATCCCTaGCTGCTCCTGATGATCCTT +
Preference number: 2 (lower is better)
Translates to: VFTTVSGLFSFVGRLTSMCRGHP*LLLMIL
Trigger: AAGGATCATCAGGAGCAGCCAGGGATGCCCCCGGCA...CATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp GATGTGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTGATATGGACAGTGGTGCAGCCTGTGTTTaGTGGGCCTGTGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: DVALHAWRSLQMVLDMDSGAACV*WACVLF
Trigger: AAACAACACACAGGCCCAGCAAACACAGGCTGCACC...ACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGCTCTGCCTGTTTTaGGCACTGCCATCCAGCCGG +
Preference number: 2 (lower is better)
Translates to: SSRQSLASFPLWADSLQCLLCLF*ALPSSR
Trigger: CCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAG...ACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATTACTCTTCGCTGTTTTaGCACAGGTGGACTCAGCAT +
Preference number: 2 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHYSSLF*HRWTQH
Trigger: ATGCTGAGTCCACCTGTGTCAAAACAGCGAAGAGTA...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp CCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCGCTTGTTGCTACAAATaGGATTACCCACTGATGGTT +
Preference number: 2 (lower is better)
Translates to: PPRRCSQNAPELPHRSCSACCYK*DYPLMV
Trigger: AACCATCAGTGGGTAATCCCATTTGTAGCAACAAGC...GGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTTGGAGCTCTCTGGGATaGTGCCTCCCAAGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: WMSSRQSLASFPLWADSLWSSLG*CLPSSW
Trigger: CCAACTACTTGGGAGGCACCATCCCAGAGAGCTCCA...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTATTCTCACAAAGGCATaGACACCTGGGCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CSLFLLSSSWLVLVADGIILTKA*TPGQAA
Trigger: AGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAAT...AATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp AACCATGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAAGCATAGATCCTTCCTaGTACATGTGGCCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: NHGCSLFLLSSSWLVLVASIDPS*YMWPAH
Trigger: GTGGGCAGGCCACATGTAGCAGGAAGGATCTATGCT...TGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCATCCACCGAGACGGTaGTCACAAAATGCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: WMSSRQSLASFPLWADSLHPPRR*SQNAPE
Trigger: CTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATG...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp ACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGTGAGTTTCATGTGGATGTaGCTCTCCACGCATGGCGCT +
Preference number: 2 (lower is better)
Translates to: TTVSGLFSFVGRLTSMSVSFMWM*LSTHGA
Trigger: AGCGCCATGCGTGGAGAGCCACATCCACATGAAACT...CACAGACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR GCA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGACCCACTGATGCTTGTTaGTACAAATGGGATTACCCA +
Preference number: 2 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRPTDAC*YKWDYP
Trigger: TGGGTAATCCCATTTGTAGCAACAAGCATCAGTGGG...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTCTGTGTGTTGTTTTCTaGGAGACTCTGGCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: CSLFLLSSSWLVLVADGILCVVF*ETLAAG
Trigger: TCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAG...AATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATAGATGGTTCTTGATATaGACAGTCCCAACCATGGTT +
Preference number: 2 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHRWFLI*TVPTMV
Trigger: AACCATGGTTGGGACTGTCCATATCAAGAACCATCT...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp ACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGTGGGCGCTCACTGCAGATaGTTCTTGATATGGACAGTC +
Preference number: 2 (lower is better)
Translates to: TTVSGLFSFVGRLTSMSVGAHCR*FLIWTV
Trigger: GACTGTCCATATCAAGAACCATCTGCAGTGAGCGCC...CACAGACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp ACTGACTGTGTTCTCAGGATAGGCGGTGCTCAGCATAGATCCTTCCTGCTACATAATGGGATTACCCACTaGTGGTTGACACAGTCAGTG +
Preference number: 2 (lower is better)
Translates to: TDCVLRIGGAQHRSFLLHNGITH*WLTQSV
Trigger: CACTGACTGTGTCAACCATCAGTGGGTAATCCCATT...ATGTAGCAGGAAGGATCTATGCTGAGCACCGCCTATCCTGAGAACACAGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp ACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGTGATGATCCTTCTCTGGTaGCAGTCACTTAGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: TTVSGLFSFVGRLTSMSVMILLW*QSLSLD
Trigger: GTCCAGACTAAGTGACTGTCACCAGAGAAGGATCAT...CACAGACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp GTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGGGACAGTCCCAACCATaGTTGCAGCTTGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: VFTTVSGLFSFVGRLTSMGQSQP*LQLVSS
Trigger: AGAAGAAACAAGCTGCAACCATGGTTGGGACTGTCC...CATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp ACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGTGGGTGTTGGTTGCAGATaGCATTCATCATTTAGGATG +
Preference number: 2 (lower is better)
Translates to: TTVSGLFSFVGRLTSMSVGVGCR*HSSFRM
Trigger: CATCCTAAATGATGAATGCCATCTGCAACCAACACC...CACAGACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp AACCATGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTaGGTTGCAGATGGCATTCATCATTTAGGATGGTTTCATCATGGA +
Preference number: 2 (lower is better)
Translates to: NHGCSLFLLSSSWLV*VADGIHHLGWFHHG
Trigger: TCCATGATGAAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR TCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTGAAGGTTCTAACTCGTaGCAGTTCTTAATATCGTCA +
Preference number: 2 (lower is better)
Translates to: WMSSRQSLASFPLWADSLEGSNS*QFLISS
Trigger: TGACGATATTAAGAACTGTCACGAGTTAGAACCTTC...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 90 bp TCGATGTCATTACTCTTCGCTGTTTTGACACAGGTGGACTCAGCATaGGTGAATCTTGATACTACAGCTCTTCCTAGCAACAGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SMSLLFAVLTQVDSA*VNLDTTALPSNSGS
Trigger: AGAACCACTGTTGCTAGGAAGAGCTGTAGTATCAAGATTCACCAATGCTGAGTCCACCTGTGTCAAAACAGCGAAGAGTAATGACATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTATTCATCATTTAGGATaGTTTCATCATGGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: WMSSRQSLASFPLWADSLIHHLG*FHHGRF
Trigger: GAACCTTCCATGATGAAACCATCCTAAATGATGAAT...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp GCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTaGCATCCAGCCGGACGCTCTGACGGCTGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: ARWCGCSACFGH*HPAGRSDGCWP
Trigger: AGGCCAGCAGCCGTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp TGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTaGTCTGCCTGTTTTGGGCACTGCCATCCAGCCGGA +
Preference number: 3 (lower is better)
Translates to: CRPSCPPARWCG*SACFGHCHPAG
Trigger: TCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 72 bp AAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTaGCCTGCTCACTGGTTTTCACGTTGCCGCCCGTCT +
Preference number: 3 (lower is better)
Translates to: KACTPGQAAPPW*PAHWFSRCRPS
Trigger: AGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp ATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTaGTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: MHTWAGCSPVVT*SLVFTLPPVLS
Trigger: GGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp ACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTaGCTGCTCTGCCTGTTTTGGGCACTGCCATCCAGC +
Preference number: 3 (lower is better)
Translates to: TLPPVLSSCTLV*LLCLFWALPSS
Trigger: GCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp GAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTACGTTGCCGCCCGTCTaGTCCTCCTGCACGCTGGTG +
Preference number: 3 (lower is better)
Translates to: ETSAFPSTETVLTKCSRATLPPV*SSCTLV
Trigger: CACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGT...AGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTaGACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCA +
Preference number: 3 (lower is better)
Translates to: SLVFTLPPVLSS*TLVWLLCLFWA
Trigger: TGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp GAGGATTCTCACAAAGGCATGCACACCTGGGCAGGCTaGTCCCCCGTGGTGACCTGCTCACTGGTTTTCACG +
Preference number: 3 (lower is better)
Translates to: EDSHKGMHTWAG*SPVVTCSLVFT
Trigger: CGTGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAATCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp GGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTaGTCACAAAATGCTCCAGAGCTTCCCCATCGCAGC +
Preference number: 3 (lower is better)
Translates to: GQRLRLSHPPRR*SQNAPELPHRS
Trigger: GCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp TTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTaGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCAT +
Preference number: 3 (lower is better)
Translates to: FSRCRPSCPPAR*CGCSACFGHCH
Trigger: ATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGAGCTGCTCTGCCTGTTTaGGGCACTGCCATCCAGCCG +
Preference number: 3 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRAALPV*GTAIQP
Trigger: CGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGC...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTaGCGGGGGCATCCCTGGCTGCTCCTGATGATCCTT +
Preference number: 3 (lower is better)
Translates to: RPLMFSLDLVPV*RGHPWLLLMIL
Trigger: AAGGATCATCAGGAGCAGCCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGTTACTCTTCGCTGTTTaGACACAGGTGGACTCAGCA +
Preference number: 3 (lower is better)
Translates to: RPLMFSLDLVPVCRGHPWLLFAV*TQVDSA
Trigger: TGCTGAGTCCACCTGTGTCAAAACAGCGAAGAGTAA...CCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 72 bp GGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTaGTATGGACAGTCCCAACCATGGTTGCAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: GSPRMALTADGS*YGQSQPWLQLV
Trigger: AACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp CTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTaGTTGGCCAGGATGAAGTTTCATGTGGATGTGGCT +
Preference number: 3 (lower is better)
Translates to: LRAVTMMDRVWC*LARMKFHVDVA
Trigger: AGCCACATCCACATGAAACTTCATCCTGGCCAAGCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp TTGCCATCGAGAACATCTGTCGCCACTGATGAGTTTTaGTACAGGGGGTCCCACCAGGATGCTGCTGACTAC +
Preference number: 3 (lower is better)
Translates to: LPSRTSVATDEF*YRGSHQDAADY
Trigger: GTAGTCAGCAGCATCCTGGTGGGACCCCCTGTACCAAAACTCATCAGTGGCGACAGATGTTCTCGATGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp TGGATGTGGCTCTCCACGCATGGCGCTCACTGCAGATaGTTCTTGATATGGACAGTCCCAACCATGGTTGCA +
Preference number: 3 (lower is better)
Translates to: WMWLSTHGAHCR*FLIWTVPTMVA
Trigger: TGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 72 bp TGGACAGTCCCAACCATGGTTGCAGCTTGTTTCTTCTaGGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCA +
Preference number: 3 (lower is better)
Translates to: WTVPTMVAACFF*AHRGWCWLQMA
Trigger: TGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTTGGGACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp GTTTTGGGAATATCCACTCTGGGTGCAGCCTGTGTTTaGTGGGCCTGTGTGTTGTTTTCTGGGAGACTCTGG +
Preference number: 3 (lower is better)
Translates to: VLGISTLGAACV*WACVLFSGRLW
Trigger: CCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAACACAGGCTGCACCCAGAGTGGATATTCCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp GTTTGCTGGGCCTGTGTGTTGTTTTCTGGGAGACTCTaGCTGCTGGAGAGGATTCTCACAAAGGCATGCACA +
Preference number: 3 (lower is better)
Translates to: VCWACVLFSGRL*LLERILTKACT
Trigger: TGTGCATGCCTTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp TGCAGCCTGTGTTTGCTGGGCCTGTGTGTTGTTTTCTaGGAGACTCTGGCTGCTGGAGAGGATTCTCACAAA +
Preference number: 3 (lower is better)
Translates to: CSLCLLGLCVVF*ETLAAGEDSHK
Trigger: TTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCAAACACAGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp GTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTGCTGGGCCTGTGTGTaGTTTTCTGGGAGACTCTGG +
Preference number: 3 (lower is better)
Translates to: VFTTVSGLFSFVGRLTSMCWACV*FSGRLW
Trigger: CCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCA...CATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp GTCTTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCAACCATGGTTGCAGCTaGTTTCTTCTGAGCTCATCG +
Preference number: 3 (lower is better)
Translates to: VLLVLLRAVTMMDRVWCCNHGCS*FLLSSS
Trigger: CGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT...GCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp GGTGCTCAGCATAGATCCTTCCTGCTACATGTGGCCTaGCCACTGATGCTTGTTGCTACAAATGGGATTACC +
Preference number: 3 (lower is better)
Translates to: GAQHRSFLLHVA*PLMLVATNGIT
Trigger: GGTAATCCCATTTGTAGCAACAAGCATCAGTGGGCAGGCCACATGTAGCAGGAAGGATCTATGCTGAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp TCCACGCATGGCGCTCACTGCAGATGGTTCTTGATATaGACAGTCCCAACCATGGTTGCAGCTTGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: STHGAHCRWFLI*TVPTMVAACFF
Trigger: GAAGAAACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGACCTTTCCTACTTGTTTaGGGAATATCCACTCTGGGT +
Preference number: 3 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRPFLLV*GISTLG
Trigger: ACCCAGAGTGGATATTCCCAAAACAAGTAGGAAAGG...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp GTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCATCGTGGCTGGTGTaGGTTGCAGATGGCATTCAT +
Preference number: 3 (lower is better)
Translates to: VFTTVSGLFSFVGRLTSMSSWLV*VADGIH
Trigger: ATGAATGCCATCTGCAACCAACACCAGCCACGATGA...CATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp CTCTGTCACCATGAAGTGCTTCTCACGGCATTGTCCTaGCATCGTAGTCACTGTCTCAACCATCTGAACACA +
Preference number: 3 (lower is better)
Translates to: LCHHEVLLTALS*HRSHCLNHLNT
Trigger: TGTGTTCAGATGGTTGAGACAGTGACTACGATGGCAGGACAATGCCGTGAGAAGCACTTCATGGTGACAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp AGGATGAAGTTTCATGTGGATGTGGCTCTCCACGCATaGCGCTCACTGCAGATGGTTCTTGATATGGACAGT +
Preference number: 3 (lower is better)
Translates to: RMKFHVDVALHA*RSLQMVLDMDS
Trigger: ACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATCCACATGAAACTTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp CTTTTATTGTCTTTGCTGCCCCCTCAGCTTTCCTTCTaGTACCTAGTGGATGTCTTCACGACAGTCTCTGGC +
Preference number: 3 (lower is better)
Translates to: LLLSLLPPQLSF*YLVDVFTTVSG
Trigger: GCCAGAGACTGTCGTGAAGACATCCACTAGGTACCAGAAGGAAAGCTGAGGGGGCAGCAAAGACAATAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 72 bp AGCATAGATCCTTCCTGCTACATGTGGCCTGCCCACTaGTGCTTGTTGCTACAAATGGGATTACCCACTGAT +
Preference number: 3 (lower is better)
Translates to: SIDPSCYMWPAH*CLLLQMGLPTD
Trigger: ATCAGTGGGTAATCCCATTTGTAGCAACAAGCATCAGTGGGCAGGCCACATGTAGCAGGAAGGATCTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp CTTCTGGTACCTAGTGGATGTCTTCACGACAGTCTCTaGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAAT +
Preference number: 3 (lower is better)
Translates to: LLVPSGCLHDSL*PLFLCGQTHFN
Trigger: ATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCACTAGGTACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR-3UTR CAA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGACAGATGGTTTTGCCATaGATGGATCTTGTTATAGAT +
Preference number: 3 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRQMVLP*MDLVID
Trigger: ATCTATAACAAGATCCATCAATGGCAAAACCATCTG...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp TCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATaGCATTCATCATTTAGGATGGTTTCATCATGGAAG +
Preference number: 3 (lower is better)
Translates to: SSELIVAGVGCR*HSSFRMVSSWK
Trigger: CTTCCATGATGAAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp AACCATGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTaGCTGGTGTTGGTTGCAGATGGCATTCATCATTTA +
Preference number: 3 (lower is better)
Translates to: NHGCSLFLLSSS*LVLVADGIHHL
Trigger: TAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR GCA 72 bp CTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTaGAGATGGCATTCATCATTTAGGATGGTTTCATCA +
Preference number: 3 (lower is better)
Translates to: LVSSELIVAGVG*RWHSSFRMVSS
Trigger: TGATGAAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR TCA 72 bp TACCCACTGATGGTTGACACAGTCAGTGTGTGCTTTTaGAAACACCTTTCCTACTTGTTTTGGGAATATCCA +
Preference number: 3 (lower is better)
Translates to: YPLMVDTVSVCF*KHLSYLFWEYP
Trigger: TGGATATTCCCAAAACAAGTAGGAAAGGTGTTTTCAAAAGCACACACTGACTGTGTCAACCATCAGTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CCA 72 bp ACAGATGGTTTTGCCATTGATGGATCTTGTTATAGATaGCTTGTCACTGAAGTTCACAGTCGATGTCATTAC +
Preference number: 3 (lower is better)
Translates to: TDGFAIDGSCYR*LVTEVHSRCHY
Trigger: GTAATGACATCGACTGTGAACTTCAGTGACAAGCCATCTATAACAAGATCCATCAATGGCAAAACCATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GCACTGCTGCCCAAGCTGATGAAGCTGGCGCTGGACAGGATGCTGCTGCCGCTGCACACCTGGGCAGGCTaGTCCCCCGTGGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: ALLPKLMKLALDRMLLPLHTWAG*SPVVTC
Trigger: GCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTG...CAGCGGCAGCAGCATCCTGTCCAGCGCCAGCTTCATCAGCTTGGGCAGCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGTCCAGCCGGACGCTCTaGCGGCTGCTGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VVTCSLVFTLPPVLSSCTSSRTL*RLLAWV
Trigger: CACCCAGGCCAGCAGCCGTCAGAGCGTCCGGCTGGA...CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp GTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTaGGGCACTGCCATCCAGCCGGACGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: VLLHAGVAALPV*GTAIQPDALTA
Trigger: AGCCGTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGCCCCTGCGTACCCGCTaGTCAGGCTGGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLPLRTR*SGWHGC
Trigger: GCAGCCATGCCAGCCTGAGCAGCGGGTACGCAGGGG...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTATGGCTGCCCTCCTCTaGCCTCGGGTGCTGCACGCT +
Preference number: 4 (lower is better)
Translates to: LLGGAESREGAPCAPWLSMAALL*PRVLHA
Trigger: AGCGTGCAGCACCCGAGGCCAGAGGAGGGCAGCCAT...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGCTGTCTGCTTGGTGCTGTaGGCGGGGCCAGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGELRVVKVLRVHRGCLAVCLVL*AGPVSR
Trigger: CCGGCTGACTGGCCCCGCCCACAGCACCAAGCAGAC...AGCAAGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGTCCCTCCAGTCTGCTTaGTGCTGTGGGCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASSKRRAETSAFPSTETVSLQSA*CCGRGQ
Trigger: CTGGCCCCGCCCACAGCACCAAGCAGACTGGAGGGA...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp TTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCGCCCTGGGAGGCCTCTaGATGTTGGCTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: FSQRHAHLGRLLPRGDLLALGGL*MLAVTS
Trigger: AGAGGTCACAGCCAACATTCAGAGGCCTCCCAGGGC...GAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCGGCTGCCCACCAAGCTaGTGTCGCTGCCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HRPLMFSLDLVPVCRGHPGCPPS*CRCPPC
Trigger: ACAAGGAGGGCAGCGACATCAGCTTGGTGGGCAGCC...GGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGCCGCCTGGGTGTTaGGCCTTCTGTTCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: HRPLMFSLDLVPVCRGHPWPPGC*AFCSAA
Trigger: TGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCA...GGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGCTCCAGTCTGCTTGGTaGTGTGGGCGGGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RPLMFSLDLVPVCRGHPWLQSAW*CGRGQS
Trigger: TGACTGGCCCCGCCCACAGCACCAAGCAGACTGGAG...CCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TTTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCACGCTGGACAGGATGCTaGTGCCGCTGCCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FTPPSNVLTRPSPCVPGARWTGC*CRCRCR
Trigger: CCGGCAGCGGCAGCGGCAGCAGCATCCTGTCCAGCG...TGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp GTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTaGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VTCSLVFTLPPV*SSCTLVWLLCL
Trigger: CAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGACTTTCAGGGGCTCCTaGGCCACTCCTGCATGGCGT +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLTFRGS*ATPAWR
Trigger: ACGCCATGCAGGAGTGGCTCAGGAGCCCCTGAAAGT...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp TTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCTGCACGCTGGAAACATaGCTCTCGCTGCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSQRHAHLGRLLPRGDLLCTLET*LSLLWV
Trigger: CACCCAGAGCAGCGAGAGTCATGTTTCCAGCGTGCA...GAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGGCTGCTCCCCCGTGGTaGCCTGCTCACTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLAAPPW*PAHWFS
Trigger: TGAAAACCAGTGAGCAGGTCACCACGGGGGAGCAGC...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCATCTTTCCCTCCAGTCTaGTTGGTGCTGTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CPPARWCGCSACFGHCHPSFPPV*LVLWAG
Trigger: CCCCGCCCACAGCACCAAGCAGACTGGAGGGAAAGA...TGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTGGACAGGATGCTGCTaGCGCTGCCGCTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ETSAFPSTETVLTKCSRAWTGCC*RCRCRA
Trigger: TGCCCGGCAGCGGCAGCGGCAGCAGCATCCTGTCCA...AGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCAGCACGCTGGTGTGGCTaGTCTGCCTGTTTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CPPARWCGCSACFGHCHPARWCG*SACFGH
Trigger: GTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGC...TGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp CCTGTTTTGGGCACTGCCATCCAGCCGGACGCTCTGACGGCTGCTGGCCTGGGTCATCCACCGAGACGGTaGTCACAAAATGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PVLGTAIQPDALTAAGLGHPPRR*SQNAPE
Trigger: CTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATG...ACCCAGGCCAGCAGCCGTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGTGGAGCCCAGCTGGCTaGTTTGGTTACTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLWSPAG*FGYWPP
Trigger: AGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCA...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAGGGTGGAGGGAAGGCTaGCTGTGGAAGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRGWREG*LWKSAA
Trigger: GGCTGCTGACTTCCACAGCCAGCCTTCCCTCCACCC...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCAAAGGCATGCACACCTaGGCAGGCTGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PPRRCSQNAPELPHRSCSKGMHT*AGCSPV
Trigger: CACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTT...GGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGTGCCGGGGGCATCCCTaGCTGCTCCTGATGATCCTT +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLCRGHP*LLLMIL
Trigger: AAGGATCATCAGGAGCAGCCAGGGATGCCCCCGGCA...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGCTGCAGCTGTTCCCGGCTaGGTTGGGCTCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: LGELRVVKVLRVHRGCLAAAVPG*VGLCHH
Trigger: ATGGTGACAGAGCCCAACCCAGCCGGGAACAGCTGC...AGCAAGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TTTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCAGCCCTCCTTGTCCCCTaGGTACCCGCTGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FTPPSNVLTRPSPCVPGAALLVP*VPAAQA
Trigger: AGCCTGAGCAGCGGGTACGCAGGGGACAAGGAGGGC...TGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAGCCTGTTTTGGGCACTaGCATCCAGCCGGACGCTCT +
Preference number: 4 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRACFGH*HPAGRS
Trigger: AGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGGC...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp AGGATAGGCGGTGCTCAGCATAGATCCTTCCTGCTACATGTGGCCTGCCCACTGCCCGTCTTGTCCTCCTaGACGCTGGTGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RIGGAQHRSFLLHVACPLPVLSS*TLVWLL
Trigger: GAGCAGCCACACCAGCGTGCAGGAGGACAAGACGGG...CAGTGGGCAGGCCACATGTAGCAGGAAGGATCTATGCTGAGCACCGCCTATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCACTCCTGCATGGCGTaGCCACGCAGGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHHSCMA*PRRGLE
Trigger: CTCCAGTCCCCTGCGTGGCCACGCCATGCAGGAGTG...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCCCCAGCTGGCTGGTTTaGTTACTGGCCGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GFSASSKRRAETSAFPSTPSWLV*LLAAWV
Trigger: CACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGG...GGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGCACTAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGGAGCTCTCTGGGATaGTGCCTCCCAAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLGGAESREGAPCAPWLSWSSLG*CLPSSW
Trigger: CCAACTACTTGGGAGGCACCATCCCAGAGAGCTCCA...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp TCCAGAGCTTCCCCATCGCAGCTGTTCCCGGCTGGGTaGGGCTCTGTCACCATGAAGTGCTTCTCACGGCAT +
Preference number: 4 (lower is better)
Translates to: SRASPSQLFPAG*GSVTMKCFSRH
Trigger: ATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCAACCCAGCCGGGAACAGCTGCGATGGGGAAGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGTGCTCTGGGTGTCACTaGGGTAGCTGCTGGACACTT +
Preference number: 4 (lower is better)
Translates to: RPLMFSLDLVPVCRGHPWCSGCH*GSCWTL
Trigger: AAGTGTCCAGCAGCTACCTCAGTGACACCCAGAGCA...CCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CGTCTTGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCGCAGCTTGTTTCTTCTaGGCTCATCGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RLVLLHAGVAALPVLGTAAACFF*AHRGWC
Trigger: ACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGC...GGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCATCACTTCAATGTCTGTaGGGTCAACCCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPPARWCGCSACFGHCHPSLQCL*GQPREG
Trigger: CCCCTCCCTGGGTTGACCTCACAGACATTGAAGTGA...TGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTAGCTCTCTGGGATGGTaGCTCCCAAGTAGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLGGAESREGAPCAPWLSSSLGW*LPSSWD
Trigger: ATCCCAACTACTTGGGAGGCACCATCCCAGAGAGCT...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCAAGGGAGAGGGGGCCCTaGGAGGCCTCTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: FTPPSNVLTRPSPCVPGARERGP*EASECW
Trigger: CCAACATTCAGAGGCCTCCCAGGGCCCCCTCTCCCT...TGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCAGGCTCTTTAGAGAGCTaGGAGGGTCTATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CPPARWCGCSACFGHCHPGSLES*EGLWSP
Trigger: TGGGCTCCATAGACCCTCCCAGCTCTCTAAAGAGCC...TGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GCACTGCTGCCCAAGCTGATGAAGCTGGCGCTGGACAGGATGCTGCTGCCGCTGGGCGCTCACTGCAGATaGTTCTTGATATGGACAGTC +
Preference number: 4 (lower is better)
Translates to: ALLPKLMKLALDRMLLPLGAHCR*FLIWTV
Trigger: GACTGTCCATATCAAGAACCATCTGCAGTGAGCGCC...CAGCGGCAGCAGCATCCTGTCCAGCGCCAGCTTCATCAGCTTGGGCAGCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGACGCTTGGAGCTCTCTaGGATGGTGCCTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: VVTCSLVFTLPPVLSSCTTLGAL*DGASQV
Trigger: TACTTGGGAGGCACCATCCCAGAGAGCTCCAAGCGT...CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CCTGTTTTGGGCACTGCCATCCAGCCGGACGCTCTGACGGCTGCTGGCCTGGGTCTCCTGAGAAGATTCTaGGCTGAAGATGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PVLGTAIQPDALTAAGLGLLRRF*AEDVQR
Trigger: TCTCTGGACATCTTCAGCCCAGAATCTTCTCAGGAG...ACCCAGGCCAGCAGCCGTCAGAGCGTCCGGCTGGATGGCAGTGCCCAAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGCCACCAGGATGCTGCTaGCTACAGATGGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ASSKRRAETSAFPSTETVPPGCC*LQMVLP
Trigger: TGGCAAAACCATCTGTAGTCAGCAGCATCCTGGTGG...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp TTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTTGCTTGGGCTCTGTCACCATaGAGTGCTTCTCACGGCATT +
Preference number: 4 (lower is better)
Translates to: LGELRVVKVLRVHRGCLAWALSP*SASHGI
Trigger: AATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCA...AGCAAGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp CACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCCTGGGAGACTCTGGCTaGTGGAGAGGATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: HRPLMFSLDLVPVCRGHPLGDSG*WRGFSQ
Trigger: TTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCCCAG...GGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGATGGACAGAGTGTGGTaGTGCTTGGCCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: ASSKRRAETSAFPSTETVMDRVW*CLARMK
Trigger: CTTCATCCTGGCCAAGCAGCACCACACTCTGTCCAT...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACGGCATTGTCCTaGCATCGTAGTCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASSKRRAETSAFPSTETVLTALS*HRSHCL
Trigger: GAGACAGTGACTACGATGGCAGGACAATGCCGTGAG...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GATGTGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTGATATGGACAGTTGCTCACCTTGTAGGTaGGGGCACTGCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: DVALHAWRSLQMVLDMDSCSPCR*GHCCPS
Trigger: GCTTGGGCAGCAGTGCCCTCACCTACAAGGTGAGCA...ACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGAGACAGTCTCCTCACTaGCTGTGTTCTCAGGATAGG +
Preference number: 4 (lower is better)
Translates to: VVTCSLVFTLPPVLSSCTRQSPH*LCSQDR
Trigger: CCTATCCTGAGAACACAGTCAGTGAGGAGACTGTCT...CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CCCCGTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGACTGCAGATGGTTCTTaGTATGGACAGTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: PRGDLLTGFHVAARLVLLTADGS*YGQSQP
Trigger: TGGTTGGGACTGTCCATATCAAGAACCATCTGCAGT...CAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGCCTCCTTTCTTGACATaGATGAGGCATCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RPLMFSLDLVPVCRGHPWPPFLT*MRHQEA
Trigger: GGCTTCCTGATGCCTCATTCATGTCAAGAAAGGAGG...CCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp AACCATGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCACTCCTGAGCCACTCCTaGATGGCGTGGCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: NHGCSLFLLSSSWLVLVALLSHS*MAWPRR
Trigger: CCTGCGTGGCCACGCCATGCAGGAGTGGCTCAGGAG...TGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTGGACGCTCTGACGGCTaGTGGCCTGGGTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WMSSRQSLASFPLWADSLGRSDG*WPGWRE
Trigger: TTCCCTCCACCCAGGCCAGCAGCCGTCAGAGCGTCC...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGACGCATGGCGCTCACTaGAGATGGTTCTTGATATGG +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLTHGAH*RWFLIW
Trigger: CCATATCAAGAACCATCTGCAGTGAGCGCCATGCGT...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAAGTTGGGATTACAGGTaGCCAGGCATGGGGATCCAT +
Preference number: 4 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRSWDYR*PGMGIH
Trigger: ATGGATCCCCATGCCTGGGCACCTGTAATCCCAACT...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CTCCTTGGGGGAGCTGAGAGTCGTGAAGGTGCTCCGTGTGCACCGTGGCTGTCTCCTTCCTGCTCATTCTaGACAGAGGATTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LLGGAESREGAPCAPWLSPSCSF*TEDSPF
Trigger: AAAAGGGGAATCCTCTGTCCAGAATGAGCAGGAAGG...AGACAGCCACGGTGCACACGGAGCACCTTCACGACTCTCAGCTCCCCCAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTAGCTGGGAGGGTCTATaGAGCCCAGCTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ETSAFPSTETVLTKCSRASWEGL*SPAGWF
Trigger: AAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCT...AGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGCGCTGCCGGGCAGGCTaGCCTCACTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VFTTVSGLFSFVGRLTSMRCRAG*PHSFPP
Trigger: TGGAGGGAAAGAGTGAGGCCAGCCTGCCCGGCAGCG...CATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGACTGCTCTGCCTGTTTTaGGCACTGCCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRLLCLF*ALPSSR
Trigger: CCGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAG...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTCCTGCACGCTGGTGTaGCTGCTCTGCCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ETSAFPSTETVLTKCSRASCTLV*LLCLFW
Trigger: CCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGA...AGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGGATGGGAAAGCCGAAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGTGGGAATATCCACTCTaGGTGCAGCCTGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ASSKRRAETSAFPSTETVWEYPL*VQPVFA
Trigger: AGCAAACACAGGCTGCACCCAGAGTGGATATTCCCA...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp AGGATAGGCGGTGCTCAGCATAGATCCTTCCTGCTACATGTGGCCTGCCCACTGGCCACTGATGAGTTTTaGTACAGGGGGTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: RIGGAQHRSFLLHVACPLATDEF*YRGSHQ
Trigger: CTGGTGGGACCCCCTGTACCAAAACTCATCAGTGGC...CAGTGGGCAGGCCACATGTAGCAGGAAGGATCTATGCTGAGCACCGCCTATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCCCTGGATGATCCTTCTCTGGTaGCAGTCACTTAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RPLMFSLDLVPVCRGHPWMILLW*QSLSLD
Trigger: GTCCAGACTAAGTGACTGTCACCAGAGAAGGATCAT...CCAGGGATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAGAGAAGATTCTGGGCTaGAGATGTCCAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQREKILG*RCPETA
Trigger: TGCTGTCTCTGGACATCTTCAGCCCAGAATCTTCTC...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCGTGGCTGGTGTTGGTTaGAGATGGCATTCATCATTT +
Preference number: 4 (lower is better)
Translates to: FSQRHAHLGRLLPRGDLLVAGVG*RWHSSF
Trigger: AAATGATGAATGCCATCTGCAACCAACACCAGCCAC...GAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGAGCCGCACTCTCCGGTaGCTGCCCACCAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: VFTTVSGLFSFVGRLTSMSRTLR*LPTKLM
Trigger: CATCAGCTTGGTGGGCAGCCACCGGAGAGTGCGGCT...CATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGGGACAGTCCCAACCATaGTTGCAGCTTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVTCSLVFTLPPVLSSCTGQSQP*LQLVSS
Trigger: AGAAGAAACAAGCTGCAACCATGGTTGGGACTGTCC...CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCACCTCAGCTTTCCTTCTaGTACCTAGTGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: CPPARWCGCSACFGHCHPPQLSF*YLVDVF
Trigger: GAAGACATCCACTAGGTACCAGAAGGAAAGCTGAGG...TGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCATGTGGCCTGCCCACTaGTGCTTGTTGCTACAAATG +
Preference number: 4 (lower is better)
Translates to: GFSASSKRRAETSAFPSTMWPAH*CLLLQM
Trigger: CATTTGTAGCAACAAGCATCAGTGGGCAGGCCACAT...GGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGCACTAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCTGGTGTGGCTGAATATCGTCAGCGTTTaGCATCGAGAACATCTGTCG +
Preference number: 4 (lower is better)
Translates to: SLVFTLPPVLSSCTLVWLNIVSV*HREHLS
Trigger: CGACAGATGTTCTCGATGGCAAACGCTGACGATATT...CAGCCACACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTCTTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCACTGGAGCTCTAAGCTaGGTGACTGTAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VLLVLLRAVTMMDRVWCCTGALS*VTVGLA
Trigger: AGCCAAGCCTACAGTCACCCAGCTTAGAGCTCCAGT...GCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTGGCCACGCAGGGGACTaGAGCTCTAAGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSRQSLASFPLWADSLQCGHAGD*SSKLGD
Trigger: GTCACCCAGCTTAGAGCTCCAGTCCCCTGCGTGGCC...ACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTTGTCCTCCTGCACGCTaGTGTGGCTGCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CSLFLLSSSWLVLVADGICPPAR*CGCSAC
Trigger: ACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA...AATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCAGGATGGTTTCATCATaGAAGGTTCTAACTCGTGAC +
Preference number: 4 (lower is better)
Translates to: FSQRHAHLGRLLPRGDLLRMVSS*KVLTRD
Trigger: GTCACGAGTTAGAACCTTCCATGATGAAACCATCCT...GAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCCATCGTGGCTGGTGTTaGTTGCAGATGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: GFSASSKRRAETSAFPSTHRGWC*LQMAFI
Trigger: GATGAATGCCATCTGCAACCAACACCAGCCACGATG...GGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGCACTAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCAATGATGGACAGAGTGTaGTGCTGCTTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: FTPPSNVLTRPSPCVPGAMMDRV*CCLARM
Trigger: CATCCTGGCCAAGCAGCACCACACTCTGTCCATCAT...TGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp TGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTaGATATGGACAGTCCCAACCATGGTTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: WLSTHGAHCRWF*IWTVPTMVAAC
Trigger: ACAAGCTGCAACCATGGTTGGGACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp CGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCTaGGCCAGGATGAAGTTTCATGTGGATGTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RAVTMMDRVWCC*ARMKFHVDVAL
Trigger: GAGAGCCACATCCACATGAAACTTCATCCTGGCCAAGCAGCACCACACTCTGTCCATCATTGTCACTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CGTCTTGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCGAAGGTTCTAACTCGTaGCAGTTCTTAATATCGTCA +
Preference number: 4 (lower is better)
Translates to: RLVLLHAGVAALPVLGTAEGSNS*QFLISS
Trigger: TGACGATATTAAGAACTGTCACGAGTTAGAACCTTC...GGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACAAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp GTCTTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCGACAGAGTGTGGTGCTaGTTGGCCAGGATGAAGTTT +
Preference number: 4 (lower is better)
Translates to: VLLVLLRAVTMMDRVWCCDRVWC*LARMKF
Trigger: AAACTTCATCCTGGCCAAGCAGCACCACACTCTGTC...GCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTCTTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCCTGTGTGTTGTTTTCTaGGAGACTCTGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLLVLLRAVTMMDRVWCCLCVVF*ETLAAG
Trigger: TCCAGCAGCCAGAGTCTCCCAGAAAACAACACACAG...GCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGGCTTGTTGCTACAAATaGGATTACCCACTGATGGTT +
Preference number: 4 (lower is better)
Translates to: ASSKRRAETSAFPSTETVACCYK*DYPLMV
Trigger: AACCATCAGTGGGTAATCCCATTTGTAGCAACAAGC...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATCTTCTGAGCTCATCGTaGCTGGTGTTGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHLLSSS*LVLVAD
Trigger: ATCTGCAACCAACACCAGCCACGATGAGCTCAGAAG...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTGTGGCTCTCCACGCATaGCGCTCACTGCAGATGGTT +
Preference number: 4 (lower is better)
Translates to: CSLFLLSSSWLVLVADGIVALHA*RSLQMV
Trigger: AACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCAC...AATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp GTTGGGCTCTGTCACCATGAAGTGCTTCTCACGGCATaGTCCTGCCATCGTAGTCACTGTCTCAACCATCTG +
Preference number: 4 (lower is better)
Translates to: VGLCHHEVLLTA*SCHRSHCLNHL
Trigger: CAGATGGTTGAGACAGTGACTACGATGGCAGGACAATGCCGTGAGAAGCACTTCATGGTGACAGAGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GTCTTGCTAGTGCTTCTGCGGGCAGTGACAATGATGGACAGAGTGTGGTGCTGCAATGGGATTACCCACTaGTGGTTGACACAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VLLVLLRAVTMMDRVWCCNGITH*WLTQSV
Trigger: CACTGACTGTGTCAACCATCAGTGGGTAATCCCATT...GCAGCACCACACTCTGTCCATCATTGTCACTGCCCGCAGAAGCACTAGCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTTCTATGGAGCCCAGCTaGCTGGTTTGGTTACTGGCC +
Preference number: 4 (lower is better)
Translates to: WMSSRQSLASFPLWADSLSMEPS*LVWLLA
Trigger: GGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGA...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAAGATGGTTCTTGATATaGACAGTCCCAACCATGGTT +
Preference number: 4 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRRWFLI*TVPTMV
Trigger: AACCATGGTTGGGACTGTCCATATCAAGAACCATCT...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGACATCTGAACACAGGATaGCTCCTGGCCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRHLNTG*LLASFL
Trigger: AAGAAAGGAGGCCAGGAGCCATCCTGTGTTCAGATG...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp GATGTGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTGATATGGACAGTTTACCCACTGATGGTTaGCACAGTCAGTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: DVALHAWRSLQMVLDMDSLPTDG*HSQCVL
Trigger: AAGCACACACTGACTGTGTCAACCATCAGTGGGTAA...ACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp CAGGTGCCCAGGCATGGGGATCCATTTACACCGCCCTCTAATGTTCTCACTAGATACTCTTCGCTGTTTTaGCACAGGTGGACTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QVPRHGDPFTPPSNVLTRYSSLF*HRWTQH
Trigger: ATGCTGAGTCCACCTGTGTCAAAACAGCGAAGAGTA...TCTAGTGAGAACATTAGAGGGCGGTGTAAATGGATCCCCATGCCTGGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATACCTTTTATTGTCTTTaGTGCCCCCTCAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHTFYCL*CPLSFP
Trigger: AGGAAAGCTGAGGGGGCAGCAAAGACAATAAAAGGT...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TGGATGTCTTCACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTAGTTTCATGTGGATGTaGCTCTCCACGCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: WMSSRQSLASFPLWADSLSFMWM*LSTHGA
Trigger: AGCGCCATGCGTGGAGAGCCACATCCACATGAAACT...AAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAGACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATTTTTATTGTCTTTGCTaGCCCCTCAGCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHFYCLC*PLSFPS
Trigger: AGAAGGAAAGCTGAGGGGGCAGCAAAGACAATAAAA...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GCTGTTTTGACACAGGTGGACTCAGCATTGGTGAATCTTGATACTACAGCTCTTTCGGGTGCTGCACGCTaGAAACATGACTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AVLTQVDSALVNLDTTALSGAAR*KHDSRC
Trigger: GCAGCGAGAGTCATGTTTCCAGCGTGCAGCACCCGA...AAGAGCTGTAGTATCAAGATTCACCAATGCTGAGTCCACCTGTGTCAAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp ACGACAGTCTCTGGCCTCTTTTCCTTTGTGGGCAGACTCACTTCAATGTCTGTGCTTCACGACAGTCTCTaGCCTCTTTTCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TTVSGLFSFVGRLTSMSVLHDSL*PLFLCG
Trigger: CCCACAAAGGAAAAGAGGCCAGAGACTGTCGTGAAG...CACAGACATTGAAGTGAGTCTGCCCACAAAGGAAAAGAGGCCAGAGACTGTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CTTAATATCGTCAGCGTTTGCCATCGAGAACATCTGTCGCCACTGATGAGTTTTTGGTTACTGGCCGCCTaGGTGTTGAGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LNIVSVCHREHLSPLMSFWLLAA*VLSLLF
Trigger: GAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCA...AAAACTCATCAGTGGCGACAGATGTTCTCGATGGCAAACGCTGACGATATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp TTTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCAGGATCTTGTTATAGATaGCTTGTCACTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FTPPSNVLTRPSPCVPGAGSCYR*LVTEVH
Trigger: GTGAACTTCAGTGACAAGCCATCTATAACAAGATCC...TGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAATTCATCATTTAGGATaGTTTCATCATGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRIHHLG*FHHGRF
Trigger: GAACCTTCCATGATGAAACCATCCTAAATGATGAAT...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR TCA 90 bp AACCATGGTTGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCATGGACTCAGCATTGGTaGATCTTGATACTACAGCTC +
Preference number: 4 (lower is better)
Translates to: NHGCSLFLLSSSWLVLVAWTQHW*ILILQL
Trigger: GAGCTGTAGTATCAAGATTCACCAATGCTGAGTCCA...TGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp AAACACCTTTCCTACTTGTTTTGGGAATATCCACTCTGGGTGCAGCCTGTGTTTATTCTCACAAAGGCATaGACACCTGGGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KHLSYLFWEYPLWVQPVFILTKA*TPGQAA
Trigger: AGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAAT...AAACACAGGCTGCACCCAGAGTGGATATTCCCAAAACAAGTAGGAAAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp CTTAATATCGTCAGCGTTTGCCATCGAGAACATCTGTCGCCACTGATGAGTTTTGGTGCAGCCTGTGTTTaGTGGGCCTGTGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LNIVSVCHREHLSPLMSFGAACV*WACVLF
Trigger: AAACAACACACAGGCCCAGCAAACACAGGCTGCACC...AAAACTCATCAGTGGCGACAGATGTTCTCGATGGCAAACGCTGACGATATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp ACTGACTGTGTTCTCAGGATAGGCGGTGCTCAGCATAGATCCTTCCTGCTACATCCCACTGATGCTTGTTaGTACAAATGGGATTACCCA +
Preference number: 4 (lower is better)
Translates to: TDCVLRIGGAQHRSFLLHPTDAC*YKWDYP
Trigger: TGGGTAATCCCATTTGTAGCAACAAGCATCAGTGGG...ATGTAGCAGGAAGGATCTATGCTGAGCACCGCCTATCCTGAGAACACAGTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp AAACACCTTTCCTACTTGTTTTGGGAATATCCACTCTGGGTGCAGCCTGTGTTTCTGCTACATGTGGCCTaGCCACTGATGCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: KHLSYLFWEYPLWVQPVFLLHVA*PLMLVA
Trigger: AGCAACAAGCATCAGTGGGCAGGCCACATGTAGCAG...AAACACAGGCTGCACCCAGAGTGGATATTCCCAAAACAAGTAGGAAAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR GCA 90 bp AAACACCTTTCCTACTTGTTTTGGGAATATCCACTCTGGGTGCAGCCTGTGTTTAGCATAGATCCTTCCTaGTACATGTGGCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KHLSYLFWEYPLWVQPVFSIDPS*YMWPAH
Trigger: GTGGGCAGGCCACATGTAGCAGGAAGGATCTATGCT...AAACACAGGCTGCACCCAGAGTGGATATTCCCAAAACAAGTAGGAAAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp CTTAATATCGTCAGCGTTTGCCATCGAGAACATCTGTCGCCACTGATGAGTTTTGGAGACTCTGGCTGCTaGAGAGGATTCTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: LNIVSVCHREHLSPLMSFGDSGC*RGFSQR
Trigger: CCTTTGTGAGAATCCTCTCCAGCAGCCAGAGTCTCC...AAAACTCATCAGTGGCGACAGATGTTCTCGATGGCAAACGCTGACGATATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
3UTR CAA 72 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTaGGTTGCAGATGGCATTCATCATTTAGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: CSLFLLSSSWLV*VADGIHHLGWF
Trigger: AAACCATCCTAAATGATGAATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CCA 90 bp GTTTTGACACAGGTGGACTCAGCATTGGTGAATCTTGATACTACAGCTCTTCCTGGTGTTGGTTGCAGATaGCATTCATCATTTAGGATG +
Preference number: 4 (lower is better)
Translates to: VLTQVDSALVNLDTTALPGVGCR*HSSFRM
Trigger: CATCCTAAATGATGAATGCCATCTGCAACCAACACC...AGGAAGAGCTGTAGTATCAAGATTCACCAATGCTGAGTCCACCTGTGTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 90 bp CTGGCCGCCTGGGTGTTGAGCCTTCTGTTCAGCCGCACTCTCCGGTaGCTGCCCACCAAGCTGATGTCGCTGCCCTCCTTGTCCCCTGCG +
Preference number: 5 (lower is better)
Translates to: LAAWVLSLLFSRTLR*LPTKLMSLPSLSPA
Trigger: CGCAGGGGACAAGGAGGGCAGCGACATCAGCTTGGTGGGCAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS GCA 90 bp TGCCCTCCTTGTCCCCTGCGTACCCGCTGCTCAGGCTGGCATGGCTaGCCTCCTCTGGCCTCGGGTGCTGCACGCTGGAAACATGACTCT +
Preference number: 5 (lower is better)
Translates to: CPPCPLRTRCSGWHG*PPLASGAARWKHDS
Trigger: AGAGTCATGTTTCCAGCGTGCAGCACCCGAGGCCAGAGGAGGGCAGCCATGCCAGCCTGAGCAGCGGGTACGCAGGGGACAAGGAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 90 bp CGGGCAGGCTGGCCTCACTCTTTCCCTCCAGTCTGCTTGGTGCTGTaGGCGGGGCCAGTCAGCCGGCTCTTTAGAGAGCTGGGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RAGWPHSFPPVCLVL*AGPVSRLFRELGGS
Trigger: AGACCCTCCCAGCTCTCTAAAGAGCCGGCTGACTGGCCCCGCCCACAGCACCAAGCAGACTGGAGGGAAAGAGTGAGGCCAGCCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GCACTGCTGCCCAAGCTGATGAAGCTGGCGCTGGACAGGATGCTGCTGCCGCTGTTCCCTCCAGTCTGCTaGGTGCTGTGGGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ALLPKLMKLALDRMLLPLFPPVC*VLWAGP
Trigger: TGGCCCCGCCCACAGCACCAAGCAGACTGGAGGGAA...CAGCGGCAGCAGCATCCTGTCCAGCGCCAGCTTCATCAGCTTGGGCAGCAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 90 bp GGAGGGTCTATGGAGCCCAGCTGGCTGGTTTGGTTACTGGCCGCCTaGGTGTTGAGCCTTCTGTTCAGCCGCACTCTCCGGTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GGSMEPSWLVWLLAA*VLSLLFSRTLRWLP
Trigger: GGGCAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 90 bp GCTTGGTGCTGTGGGCGGGGCCAGTCAGCCGGCTCTTTAGAGAGCTaGGAGGGTCTATGGAGCCCAGCTGGCTGGTTTGGTTACTGGCCG +
Preference number: 5 (lower is better)
Translates to: AWCCGRGQSAGSLES*EGLWSPAGWFGYWP
Trigger: CGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTCTCTAAAGAGCCGGCTGACTGGCCCCGCCCACAGCACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS TCA 90 bp CTATGGAGCCCAGCTGGCTGGTTTGGTTACTGGCCGCCTGGGTGTTaGGCCTTCTGTTCAGCCGCACTCTCCGGTGGCTGCCCACCAAGC +
Preference number: 5 (lower is better)
Translates to: LWSPAGWFGYWPPGC*AFCSAALSGGCPPS
Trigger: GCTTGGTGGGCAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GCACTGCTGCCCAAGCTGATGAAGCTGGCGCTGGACAGGATGCTGCTGCCGCTGCTTAGTCTGGACTCCTaGGGGGAGCTGAGAGTCGTG +
Preference number: 5 (lower is better)
Translates to: ALLPKLMKLALDRMLLPLLSLDS*GELRVV
Trigger: CACGACTCTCAGCTCCCCCAAGGAGTCCAGACTAAG...CAGCGGCAGCAGCATCCTGTCCAGCGCCAGCTTCATCAGCTTGGGCAGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGCTGTTCCCGGCTGGGTaGGGCTCTGTCACCATGAAG +
Preference number: 5 (lower is better)
Translates to: ASSKRRAETSAFPSTETVLFPAG*GSVTMK
Trigger: CTTCATGGTGACAGAGCCCAACCCAGCCGGGAACAG...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 90 bp GTCAGCCGGCTCTTTAGAGAGCTGGGAGGGTCTATGGAGCCCAGCTaGCTGGTTTGGTTACTGGCCGCCTGGGTGTTGAGCCTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: VSRLFRELGGSMEPS*LVWLLAAWVLSLLF
Trigger: GAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTCTCTAAAGAGCCGGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATGCCCAGCTGGCTGGTTaGGTTACTGGCCGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHAQLAG*VTGRLG
Trigger: ACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGC...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 90 bp CTCTTTAGAGAGCTGGGAGGGTCTATGGAGCCCAGCTGGCTGGTTTaGTTACTGGCCGCCTGGGTGTTGAGCCTTCTGTTCAGCCGCACT +
Preference number: 5 (lower is better)
Translates to: LFRELGGSMEPSWLV*LLAAWVLSLLFSRT
Trigger: AGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTCTCTAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GATGTGGCTCTCCACGCATGGCGCTCACTGCAGATGGTTCTTGATATGGACAGTACGTTGCCGCCCGTCTaGTCCTCCTGCACGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DVALHAWRSLQMVLDMDSTLPPV*SSCTLV
Trigger: CACCAGCGTGCAGGAGGACAAGACGGGCGGCAACGT...ACTGTCCATATCAAGAACCATCTGCAGTGAGCGCCATGCGTGGAGAGCCACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGATCACTGGTTTTCACGTaGCCGCCCGTCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRSLVFT*PPVLSS
Trigger: GGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGA...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGAGGGTGCAGCCTGTGTTaGCTGGGCCTGTGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRGCSLC*LGLCVV
Trigger: AACAACACACAGGCCCAGCAAACACAGGCTGCACCC...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGGTGCTTCTCACGGCATaGTCCTGCCATCGTAGTCAC +
Preference number: 5 (lower is better)
Translates to: VVTCSLVFTLPPVLSSCTVLLTA*SCHRSH
Trigger: GTGACTACGATGGCAGGACAATGCCGTGAGAAGCAC...CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp TTACACCGCCCTCTAATGTTCTCACTAGACCTAGTCCCTGTGTGCCGGGGGCATTGCACCGTGGCTGTCTaGCTAGTGCTTCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LHRPLMFSLDLVPVCRGHCTVAV*LVLLRA
Trigger: TGCCCGCAGAAGCACTAGCAAGACAGCCACGGTGCA...ATGCCCCCGGCACACAGGGACTAGGTCTAGTGAGAACATTAGAGGGCGGTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GCCTCCAGTAAGAGACGGGCAGAGACTTCGGCTTTCCCATCCACCGAGACGGTGTCATCGTGGCTGGTGTaGGTTGCAGATGGCATTCAT +
Preference number: 5 (lower is better)
Translates to: ASSKRRAETSAFPSTETVSSWLV*VADGIH
Trigger: ATGAATGCCATCTGCAACCAACACCAGCCACGATGA...CACCGTCTCGGTGGATGGGAAAGCCGAAGTCTCTGCCCGTCTCTTACTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp TTCTCACAAAGGCATGCACACCTGGGCAGGCTGCTCCCCCGTGGTGACCTGCTCAACCATGGTTGCAGCTaGTTTCTTCTGAGCTCATCG +
Preference number: 5 (lower is better)
Translates to: FSQRHAHLGRLLPRGDLLNHGCS*FLLSSS
Trigger: CGATGAGCTCAGAAGAAACAAGCTGCAACCATGGTT...GAGCAGGTCACCACGGGGGAGCAGCCTGCCCAGGTGTGCATGCCTTTGTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GTGGTGACCTGCTCACTGGTTTTCACGTTGCCGCCCGTCTTGTCCTCCTGCACGCACTGCAGATGGTTCTaGATATGGACAGTCCCAACC +
Preference number: 5 (lower is better)
Translates to: VVTCSLVFTLPPVLSSCTHCRWF*IWTVPT
Trigger: GGTTGGGACTGTCCATATCAAGAACCATCTGCAGTG...CGTGCAGGAGGACAAGACGGGCGGCAACGTGAAAACCAGTGAGCAGGTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTGCTGCTCTGCCTGTTTaGGGCACTGCCATCCAGCCG +
Preference number: 5 (lower is better)
Translates to: CSLFLLSSSWLVLVADGIAALPV*GTAIQP
Trigger: CGGCTGGATGGCAGTGCCCAAAACAGGCAGAGCAGC...AATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp GTGAGGTCAACCCAGGGAGGGGGTTTAGTGCCTCCAGTAAGAGACGGGCAGAGACACCTTTTATTGTCTTaGCTGCCCCCTCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: VRSTQGGGLVPPVRDGQRHLLLS*LPPQLS
Trigger: GGAAAGCTGAGGGGGCAGCAAAGACAATAAAAGGTG...TCTCTGCCCGTCTCTTACTGGAGGCACTAAACCCCCTCCCTGGGTTGACCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp TGTCCTCCTGCACGCTGGTGTGGCTGCTCTGCCTGTTTTGGGCACTGCCATCCATCTAGACACCTTTTATaGTCTTTGCTGCCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: CPPARWCGCSACFGHCHPSRHLL*SLLPPQ
Trigger: CTGAGGGGGCAGCAAAGACAATAAAAGGTGTCTAGA...TGGATGGCAGTGCCCAAAACAGGCAGAGCAGCCACACCAGCGTGCAGGAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp CCACCGAGACGGTGCTCACAAAATGCTCCAGAGCTTCCCCATCGCAGCTGTTCCTTACTCTTCGCTGTTTaGACACAGGTGGACTCAGCA +
Preference number: 5 (lower is better)
Translates to: PPRRCSQNAPELPHRSCSLLFAV*TQVDSA
Trigger: TGCTGAGTCCACCTGTGTCAAAACAGCGAAGAGTAA...GGAACAGCTGCGATGGGGAAGCTCTGGAGCATTTTGTGAGCACCGTCTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp AAACACCTTTCCTACTTGTTTTGGGAATATCCACTCTGGGTGCAGCCTGTGTTTCTGGCCGCCTGGGTGTaGAGCCTTCTGTTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: KHLSYLFWEYPLWVQPVFLAAWV*SLLFSR
Trigger: GCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAG...AAACACAGGCTGCACCCAGAGTGGATATTCCCAAAACAAGTAGGAAAGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS GCA 90 bp GACTGGAGCTCTAAGCTGGGTGACTGTAGGCTTGGCTCTCCTTCCTaGTCATTCTGGACAGAGGATTCCCCTTTTTCTCCCTCGAGAAAA +
Preference number: 5 (lower is better)
Translates to: DWSSKLGDCRLGSPS*SFWTEDSPFSPSRK
Trigger: TTTTCTCGAGGGAGAAAAAGGGGAATCCTCTGTCCAGAATGAGCAGGAAGGAGAGCCAAGCCTACAGTCACCCAGCTTAGAGCTCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp TGCAGCTTGTTTCTTCTGAGCTCATCGTGGCTGGTGTTGGTTGCAGATGGCATTAGAGTGTGGTGCTGCTaGGCCAGGATGAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: CSLFLLSSSWLVLVADGIRVWCC*ARMKFH
Trigger: ATGAAACTTCATCCTGGCCAAGCAGCACCACACTCT...AATGCCATCTGCAACCAACACCAGCCACGATGAGCTCAGAAGAAACAAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp CTTAATATCGTCAGCGTTTGCCATCGAGAACATCTGTCGCCACTGATGAGTTTTTGCTGGGCCTGTGTGTaGTTTTCTGGGAGACTCTGG +
Preference number: 5 (lower is better)
Translates to: LNIVSVCHREHLSPLMSFCWACV*FSGRLW
Trigger: CCAGAGTCTCCCAGAAAACAACACACAGGCCCAGCA...AAAACTCATCAGTGGCGACAGATGTTCTCGATGGCAAACGCTGACGATATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS-3UTR CAA 90 bp ACTGACTGTGTTCTCAGGATAGGCGGTGCTCAGCATAGATCCTTCCTGCTACATCTTGTTATAGATGGCTaGTCACTGAAGTTCACAGTC +
Preference number: 5 (lower is better)
Translates to: TDCVLRIGGAQHRSFLLHLVIDG*SLKFTV
Trigger: GACTGTGAACTTCAGTGACAAGCCATCTATAACAAG...ATGTAGCAGGAAGGATCTATGCTGAGCACCGCCTATCCTGAGAACACAGTCAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CAA 90 bp CGCACTCTCCGGTGGCTGCCCACCAAGCTGATGTCGCTGCCCTCCTaGTCCCCTGCGTACCCGCTGCTCAGGCTGGCATGGCTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RTLRWLPTKLMSLPS*SPAYPLLRLAWLPS
Trigger: GGAGGGCAGCCATGCCAGCCTGAGCAGCGGGTACGCAGGGGACAAGGAGGGCAGCGACATCAGCTTGGTGGGCAGCCACCGGAGAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 72 bp TCCTTGTCCCCTGCGTACCCGCTGCTCAGGCTGGCATaGCTGCCCTCCTCTGGCCTCGGGTGCTGCACGCTG +
Preference number: 6 (lower is better)
Translates to: SLSPAYPLLRLA*LPSSGLGCCTL
Trigger: CAGCGTGCAGCACCCGAGGCCAGAGGAGGGCAGCCATGCCAGCCTGAGCAGCGGGTACGCAGGGGACAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS GCA 72 bp GCCCACCAAGCTGATGTCGCTGCCCTCCTTGTCCCCTaGGTACCCGCTGCTCAGGCTGGCATGGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: AHQADVAALLVP*VPAAQAGMAAL
Trigger: GAGGGCAGCCATGCCAGCCTGAGCAGCGGGTACGCAGGGGACAAGGAGGGCAGCGACATCAGCTTGGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CAA 72 bp CGGTGGCTGCCCACCAAGCTGATGTCGCTGCCCTCCTaGTCCCCTGCGTACCCGCTGCTCAGGCTGGCATGG +
Preference number: 6 (lower is better)
Translates to: RWLPTKLMSLPS*SPAYPLLRLAW
Trigger: CCATGCCAGCCTGAGCAGCGGGTACGCAGGGGACAAGGAGGGCAGCGACATCAGCTTGGTGGGCAGCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS TCA 72 bp TGTTCAGCCGCACTCTCCGGTGGCTGCCCACCAAGCTaGTGTCGCTGCCCTCCTTGTCCCCTGCGTACCCGC +
Preference number: 6 (lower is better)
Translates to: CSAALSGGCPPS*CRCPPCPLRTR
Trigger: GCGGGTACGCAGGGGACAAGGAGGGCAGCGACATCAGCTTGGTGGGCAGCCACCGGAGAGTGCGGCTGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS TCA 72 bp CCAGCTGGCTGGTTTGGTTACTGGCCGCCTGGGTGTTaGGCCTTCTGTTCAGCCGCACTCTCCGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: PAGWFGYWPPGC*AFCSAALSGGC
Trigger: GCAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CAA 72 bp CCCAGCTGGCTGGTTTGGTTACTGGCCGCCTGGGTGTaGAGCCTTCTGTTCAGCCGCACTCTCCGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: PSWLVWLLAAWV*SLLFSRTLRWL
Trigger: CAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CAA 90 bp TCTATGGAGCCCAGCTGGCTGGTTTGGTTACTGGCCGCCTGGGTGTaGAGCCTTCTGTTCAGCCGCACTCTCCGGTGGCTGCCCACCAAG +
Preference number: 6 (lower is better)
Translates to: SMEPSWLVWLLAAWV*SLLFSRTLRWLPTK
Trigger: CTTGGTGGGCAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 72 bp TGGGTGTTGAGCCTTCTGTTCAGCCGCACTCTCCGGTaGCTGCCCACCAAGCTGATGTCGCTGCCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: WVLSLLFSRTLR*LPTKLMSLPSL
Trigger: CAAGGAGGGCAGCGACATCAGCTTGGTGGGCAGCCACCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 72 bp ATGGAGCCCAGCTGGCTGGTTTGGTTACTGGCCGCCTaGGTGTTGAGCCTTCTGTTCAGCCGCACTCTCCGG +
Preference number: 6 (lower is better)
Translates to: MEPSWLVWLLAA*VLSLLFSRTLR
Trigger: CCGGAGAGTGCGGCTGAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS TCA 72 bp TGGTTTATCCAGGGAGAGGGGGCCCTGGGAGGCCTCTaGATGTTGGCTGTGACCTCTCTGGGGAGAGGTGAC +
Preference number: 6 (lower is better)
Translates to: WFIQGEGALGGL*MLAVTSLGRGD
Trigger: GTCACCTCTCCCCAGAGAGGTCACAGCCAACATTCAGAGGCCTCCCAGGGCCCCCTCTCCCTGGATAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 72 bp GAGCTGGGAGGGTCTATGGAGCCCAGCTGGCTGGTTTaGTTACTGGCCGCCTGGGTGTTGAGCCTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: ELGGSMEPSWLV*LLAAWVLSLLF
Trigger: GAACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 72 bp CAGTCAGCCGGCTCTTTAGAGAGCTGGGAGGGTCTATaGAGCCCAGCTGGCTGGTTTGGTTACTGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: QSAGSLESWEGL*SPAGWFGYWPP
Trigger: AGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTCTCTAAAGAGCCGGCTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CCA 72 bp CTCTTTAGAGAGCTGGGAGGGTCTATGGAGCCCAGCTaGCTGGTTTGGTTACTGGCCGCCTGGGTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: LFRELGGSMEPS*LVWLLAAWVLS
Trigger: GCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTCTCTAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CAA 72 bp AGAGCTGGGAGGGTCTATGGAGCCCAGCTGGCTGGTTaGGTTACTGGCCGCCTGGGTGTTGAGCCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: RAGRVYGAQLAG*VTGRLGVEPSV
Trigger: AACAGAAGGCTCAACACCCAGGCGGCCAGTAACCAAACCAGCCAGCTGGGCTCCATAGACCCTCCCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505035.3
CDS CAA 90 bp GTGGCCACGCAGGGGACTGGAGCTCTAAGCTGGGTGACTGTAGGCTaGGCTCTCCTTCCTGCTCATTCTGGACAGAGGATTCCCCTTTTT +
Preference number: 6 (lower is better)
Translates to: VATQGTGALSWVTVG*ALLPAHSGQRIPLF
Trigger: AAAAAGGGGAATCCTCTGTCCAGAATGAGCAGGAAGGAGAGCCAAGCCTACAGTCACCCAGCTTAGAGCTCCAGTCCCCTGCGTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505035.3