RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C16ORF72 (Homo sapiens)

Ensembl gene IDs: ENSG00000182831

Ensembl transcript IDs: ENST00000327827.12, ENST00000574285.2

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGCGTGGTGGCGCACACCTGTAGTTATAGGCAGGAGAATCGCTTaGACCCGGGAGGCAGAGATTGCGGTGAGCTGGGATCGCACCACC +
Preference number: 1 (lower is better)
Translates to: WAWWRTPVVIGRRIA*TREAEIAVSWDRTT
Trigger: GGTGGTGCGATCCCAGCTCACCGCAATCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTATAACTACAGGTGTGCGCCACCACGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 90 bp CGAGGGAAGGCAAGGCAGCTAGCCCTGGAGGTGAGAAGACACCGTTaGTCCACCAGCGCAGGTGCAGGGCCCTCTGCAGATTTGTTCCAC +
Preference number: 1 (lower is better)
Translates to: RGKARQLALEVRRHR*STSAGAGPSADLFH
Trigger: GTGGAACAAATCTGCAGAGGGCCCTGCACCTGCGCTGGTGGATCAACGGTGTCTTCTCACCTCCAGGGCTAGCTGCCTTGCCTTCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 90 bp CCTGGATATCTCATCCCATCAAACCCAACAGCACAACACACGGTCTaGCAGCCAGCCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCT +
Preference number: 1 (lower is better)
Translates to: PGYLIPSNPTAQHTV*QPAWVLGPARLSNA
Trigger: AGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGGCTGGCTGTCAGACCGTGTGTTGTGCTGTTGGGTTTGATGGGATGAGATATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 90 bp GAAAGATGGACTGGCAACAACAGCTCAGGACTGGAAAGTGAGAGCTaGAACATTAGGCCAAGAGCCCAGGCTCACCTCCTCCAGAGGGCC +
Preference number: 1 (lower is better)
Translates to: ERWTGNNSSGLESES*NIRPRAQAHLLQRA
Trigger: GGCCCTCTGGAGGAGGTGAGCCTGGGCTCTTGGCCTAATGTTTCAGCTCTCACTTTCCAGTCCTGAGCTGTTGTTGCCAGTCCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 90 bp CTAAAATCCCTTAGCCAAGAGTGCCTTCTTATGACAGGTCTGGCCTaGGGAGATAGAGATCCACCTGCCCACTGGCTGCACTCTGCTGGT +
Preference number: 1 (lower is better)
Translates to: LKSLSQECLLMTGLA*GDRDPPAHWLHSAG
Trigger: ACCAGCAGAGTGCAGCCAGTGGGCAGGTGGATCTCTATCTCCCCAGGCCAGACCTGTCATAAGAAGGCACTCTTGGCTAAGGGATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 90 bp ATCATGGCTCATGCCAGTATTCCCAACACTTCGGAAGGTCGAGGTTaGGGTATGGCTTGCACCCATGAGTTCGAGACCAGCCTGGACAAC +
Preference number: 1 (lower is better)
Translates to: IMAHASIPNTSEGRG*GMACTHEFETSLDN
Trigger: GTTGTCCAGGCTGGTCTCGAACTCATGGGTGCAAGCCATACCCCAACCTCGACCTTCCGAAGTGTTGGGAATACTGGCATGAGCCATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 90 bp CTTGGCGTCTTGCACTGGCCTCTGAGGCTGACTAGCCCTCTGGGTTaGATGTTGGCCATCCCTCTCACTATAAAGGAAGTTAGCCAGTTT +
Preference number: 1 (lower is better)
Translates to: LGVLHWPLRLTSPLG*MLAIPLTIKEVSQF
Trigger: AAACTGGCTAACTTCCTTTATAGTGAGAGGGATGGCCAACATCCAACCCAGAGGGCTAGTCAGCCTCAGAGGCCAGTGCAAGACGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 90 bp ATCCAACCCTTTCCAGAGATAGCACTGGGTTGGACAGGGCAACTCTaGATCTCTCCCTCCAGTGAGGAGACAGACAACGTAACCAACTTC +
Preference number: 1 (lower is better)
Translates to: IQPFPEIALGWTGQL*ISPSSEETDNVTNF
Trigger: GAAGTTGGTTACGTTGTCTGTCTCCTCACTGGAGGGAGAGATTCAGAGTTGCCCTGTCCAACCCAGTGCTATCTCTGGAAAGGGTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp ATTTCCCGGGTTTCTCCAGCAATACTAAAATCCCTTAGCCAAGAGTaGCTTCTTATGACAGGTCTGGCCTGGGGAGATAGAGATCCACCT +
Preference number: 1 (lower is better)
Translates to: ISRVSPAILKSLSQE*LLMTGLAWGDRDPP
Trigger: AGGTGGATCTCTATCTCCCCAGGCCAGACCTGTCATAAGAAGGCACTCTTGGCTAAGGGATTTTAGTATTGCTGGAGAAACCCGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 90 bp TGGCTCAATGGCTCAATGAGTCATTCTGCTGTTGGGGCAGAAGAATaGGTCCAACCTGAAACTTCATCTGAGATAAATGCCTGTGGGACA +
Preference number: 1 (lower is better)
Translates to: WLNGSMSHSAVGAEE*VQPETSSEINACGT
Trigger: TGTCCCACAGGCATTTATCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGACTCATTGAGCCATTGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 90 bp TTTCCAGAGACAGCACCGAATCTGCCATATAGAGAATGTGCTGAATaGCTCAATGGCTCAATGAGTCATTCTGCTGTTGGGGCAGAAGAA +
Preference number: 1 (lower is better)
Translates to: FPETAPNLPYRECAE*LNGSMSHSAVGAEE
Trigger: TTCTTCTGCCCCAACAGCAGAATGACTCATTGAGCCATTGAGCCATTCAGCACATTCTCTATATGGCAGATTCGGTGCTGTCTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 90 bp CGAATCTGCCATATAGAGAATGTGCTGAATGGCTCAATGGCTCAATaGGTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAA +
Preference number: 1 (lower is better)
Translates to: RICHIENVLNGSMAQ*VILLLGQKNESNLK
Trigger: TTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGACTCATTGAGCCATTGAGCCATTCAGCACATTCTCTATATGGCAGATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 90 bp ATGGAACAGTCTGAATCAGGGTCAGCAACTTGCAGAGACCACCTATaGTATGCTACGAGTGAAAGTGGGGCTTTGAATAAACATACCGAG +
Preference number: 1 (lower is better)
Translates to: MEQSESGSATCRDHL*YATSESGALNKHTE
Trigger: CTCGGTATGTTTATTCAAAGCCCCACTTTCACTCGTAGCATATCATAGGTGGTCTCTGCAAGTTGCTGACCCTGATTCAGACTGTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 90 bp ATCCTGACCGGGGGCCCTAAGAAACTGGCATTCTTGCATTGGAAATaGATTGCACTATTCAGATGCACAGCACTCCTTTTGCACAAAGTT +
Preference number: 1 (lower is better)
Translates to: ILTGGPKKLAFLHWK*IALFRCTALLLHKV
Trigger: AACTTTGTGCAAAAGGAGTGCTGTGCATCTGAATAGTGCAATTCATTTCCAATGCAAGAATGCCAGTTTCTTAGGGCCCCCGGTCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp TTTTGCACAAAGTTGTGTTCTGAGGTGCCAGGACATCCAAGCACTTaGAGTGTCAATGTCGTGTTTAAGATGTACCAGGGGAGTTCAAAC +
Preference number: 1 (lower is better)
Translates to: FCTKLCSEVPGHPST*SVNVVFKMYQGSSN
Trigger: GTTTGAACTCCCCTGGTACATCTTAAACACGACATTGACACTGCAAGTGCTTGGATGTCCTGGCACCTCAGAACACAACTTTGTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 90 bp CTAAAACATCACACACCTCAAATATTCCAAAGGGAGGCTAGAAGCTaGCCTTATGGGGTAAGGTCATCTAAACCATCAAAGCCGACAACT +
Preference number: 1 (lower is better)
Translates to: LKHHTPQIFQREARS*PYGVRSSKPSKPTT
Trigger: AGTTGTCGGCTTTGATGGTTTAGATGACCTTACCCCATAAGGCCAGCTTCTAGCCTCCCTTTGGAATATTTGAGGTGTGTGATGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 90 bp AGCATAAACAGATCAATCCCATTTTTGCCTGAGCTTCCAAAGTTCTaGCAGCCTAACTATTCCACTGTGTCAGGAACAGTGTGCAGTCTT +
Preference number: 1 (lower is better)
Translates to: SINRSIPFLPELPKF*QPNYSTVSGTVCSL
Trigger: AAGACTGCACACTGTTCCTGACACAGTGGAATAGTTAGGCTGTCAGAACTTTGGAAGCTCAGGCAAAAATGGGATTGATCTGTTTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp TATCACCTTTCACAAAGGAGACTGGCTTGGAGAAGTCAAGCATGTTaGCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGT +
Preference number: 1 (lower is better)
Translates to: YHLSQRRLAWRSQAC*PRLPRKIAYTQRLC
Trigger: ACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAAAGGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp ATGACAGTAATGGTTCCCATTGGTGCCTATTATGACACCAGACCCTaGATGCTAGAGGCCTTTGAGTCTGAAATGATGTGTAACTTTACA +
Preference number: 1 (lower is better)
Translates to: MTVMVPIGAYYDTRP*MLEAFESEMMCNFT
Trigger: TGTAAAGTTACACATCATTTCAGACTCAAAGGCCTCTAGCATGCAGGGTCTGGTGTCATAATAGGCACCAATGGGAACCATTACTGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp CCCATTCTCAAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATaGAGTCTACATGTTTACATTTACCATAAGGAAAGTACCCCGCAT +
Preference number: 1 (lower is better)
Translates to: PILKVHDLSTLGHLE*SLHVYIYHKESTPH
Trigger: ATGCGGGGTACTTTCCTTATGGTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTTGAGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CCA 90 bp GCAGTATTCAATGCTGTCACACAGGTTAACTCTCCCAGCTCTATTTaGAAGTCTGTATTAGACAGCAACAAGCAACAACAGACTTATCAC +
Preference number: 1 (lower is better)
Translates to: AVFNAVTQVNSPSSI*KSVLDSNKQQQTYH
Trigger: GTGATAAGTCTGTTGTTGCTTGTTGCTGTCTAATACAGACTTCCAAATAGAGCTGGGAGAGTTAACCTGTGTGACAGCATTGAATACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 90 bp ATGCAGCCTATTAATTCTCAAGGCGATGGACATGGTGCCTCAATCTaGTTCCCTGGGTTTAGATACTTCACTGTCTACTATAATTCTATT +
Preference number: 1 (lower is better)
Translates to: MQPINSQGDGHGASI*FPGFRYFTVYYNSI
Trigger: AATAGAATTATAGTAGACAGTGAAGTATCTAAACCCAGGGAATCAGATTGAGGCACCATGTCCATCGCCTTGAGAATTAATAGGCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp GTTTATCACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTaGAGGTCTTTAGATTCAGCCAAATGCTTTCCAACAATTTTGCTC +
Preference number: 1 (lower is better)
Translates to: VYHYSSWVNHIEESD*RSLDSAKCFPTILL
Trigger: GAGCAAAATTGTTGGAAAGCATTTGGCTGAATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTGATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 90 bp CCCTTTCTGCTCTCAGAAGACCTTCCACATACCACATTCATGACGTaGATAGAAATTAACCAAATCCATATTTTGCCTCAACAGAAAAAG +
Preference number: 1 (lower is better)
Translates to: PFLLSEDLPHTTFMT*IEINQIHILPQQKK
Trigger: CTTTTTCTGTTGAGGCAAAATATGGATTTGGTTAATTTCTATTCACGTCATGAATGTGGTATGTGGAAGGTCTTCTGAGAGCAGAAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 90 bp TTTAATATAATGTCTTGTAAGTATATCACCTTTCACAAAGGAGACTaGCTTGGAGAAGTCAAGCATGTTGCCCAAGGTTACCGAGGAAAA +
Preference number: 1 (lower is better)
Translates to: FNIMSCKYITFHKGD*LGEVKHVAQGYRGK
Trigger: TTTTCCTCGGTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAAAGGTGATATACTTACAAGACATTATATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 90 bp AGTCCAATAATTAGAATTGCACACTGTTACTATATAGAAACCAGGTaGATGGTACAGTGCAGCTGCAAAAATGGAAGCCAAATCATGTTT +
Preference number: 1 (lower is better)
Translates to: SPIIRIAHCYYIETR*MVQCSCKNGSQIMF
Trigger: AAACATGATTTGGCTTCCATTTTTGCAGCTGCACTGTACCATGCACCTGGTTTCTATATAGTAACAGTGTGCAATTCTAATTATTGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CAA 90 bp ACGAGGGAAGGCAAGGCAGCTAGCCCTGGAGGTGAGAAGACACCGTaGATCCACCAGCGCAGGTGCAGGGCCCTCTGCAGATTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: TREGKAASPGGEKTP*IHQRRCRALCRFVP
Trigger: TGGAACAAATCTGCAGAGGGCCCTGCACCTGCGCTGGTGGATCAACGGTGTCTTCTCACCTCCAGGGCTAGCTGCCTTGCCTTCCCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAGCACTCTGCTGGTCCTaGCTCTTAAAGTGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: EVEVAVSQYRANALQPGPALCWS*LLKCKG
Trigger: TCCCTTGCACTTTAAGAGGCAGGACCAGCAGAGTGC...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGGCAGTGACAGGGCCTaGGGACAGGTCAGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSGSDRA*GQVRQA
Trigger: GGCCTGCCTGACCTGTCCTCAGGCCCTGTCACTGCC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTATTAGCTGGGCGTGGTaGCAGGCGCCTACAATCCCA +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSISWAW*QAPTIP
Trigger: TGGGATTGTAGGCGCCTGCCACCACGCCCAGCTAAT...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 90 bp GTCTTGCACTGGCCTCTGAGGCTGACTAGCCCTCTGGGTTGGATGTaGGCCATCCCTCTCACTATAAAGGAAGTTAGCCAGTTTTCACTG +
Preference number: 2 (lower is better)
Translates to: VLHWPLRLTSPLGWM*AIPLTIKEVSQFSL
Trigger: CAGTGAAAACTGGCTAACTTCCTTTATAGTGAGAGGGATGGCCAACATCCAACCCAGAGGGCTAGTCAGCCTCAGAGGCCAGTGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGGGCACGAGAATCATTTaGACCCAGGAGGCGGAAGTC +
Preference number: 2 (lower is better)
Translates to: SEINACGTIWRCTPEDSGGTRII*TQEAEV
Trigger: GACTTCCGCCTCCTGGGTTCAAATGATTCTCGTGCC...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTATTGCCCAGGGGAAATaGGGGTACCCACCGGACCTG +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVIAQGK*GYPPDL
Trigger: CAGGTCCGGTGGGTACCCTCATTTCCCCTGGGCAAT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGACTGGGTGCTCGGGCCTaGTCGTCTCTCAAATGCTGC +
Preference number: 2 (lower is better)
Translates to: TGYCLTELHKEPADPIIGLGARA*SSLKCC
Trigger: GCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAG...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAGATCCACCTGCCCACTaGCTGCACTCTGCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: VILLLGQKNESNLKLHLRDPPAH*LHSAGP
Trigger: AGGACCAGCAGAGTGCAGCCAGTGGGCAGGTGGATC...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTATGACAGGTCTGGCCTaGGGAGATAGAGATCCACCT +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSMTGLA*GDRDPP
Trigger: AGGTGGATCTCTATCTCCCCAGGCCAGACCTGTCAT...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTCTAAGGCAGATCACTTaGGGTCAGGTGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSLRQIT*GQVFKT
Trigger: GGTCTTGAACACCTGACCTCAAGTGATCTGCCTTAG...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTCCACTGGCTGCACTCTaGTGGTCCTGCCTCTTAAAG +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVPLAAL*WSCLLK
Trigger: CTTTAAGAGGCAGGACCAGCAGAGTGCAGCCAGTGG...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACTATCACTACTCCAGTTaGGTAAACCACATTGAAGAA +
Preference number: 2 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHYHYSS*VNHIEE
Trigger: TTCTTCAATGTGGTTTACCCAACTGGAGTAGTGATA...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTTCTCTCCCACTAAACTaGGTTCCCAGGCTTACAAGG +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSSLPLN*VPRLTR
Trigger: CCTTGTAAGCCTGGGAACCCAGTTTAGTGGGAGAGA...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACACCCTTACACTGATTTaGAATGGTCTTTTAAGGATA +
Preference number: 2 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHTLTLI*NGLLRI
Trigger: TATCCTTAAAAGACCATTGCAAATCAGTGTAAGGGT...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACTTAGATTCAGCCAAATaGTTTCCAACAATTTTGCTC +
Preference number: 2 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHLDSAK*FPTILL
Trigger: GAGCAAAATTGTTGGAAAGCATTTGGCTGAATCTAA...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGTCCCTTAGCCAAGAGTaGCTTCTTATGACAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SEINACGTIWRCTPEDSGSLSQE*LLMTGL
Trigger: CAGACCTGTCATAAGAAGGCACTCTTGGCTAAGGGA...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGACCTGCTTAGCCATCTaGGTGATCCATCTTTCCATC +
Preference number: 2 (lower is better)
Translates to: SEINACGTIWRCTPEDSGTCLAI*VIHLSI
Trigger: GATGGAAAGATGGATCACGCAGATGGCTAAGCAGGT...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACCAATATCGCGCCAATaGACTCCAGCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLPISRQ*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCATTGGCGCGATATTGG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTTTCAACAAGACTCATaGCCAGGCGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVFQQDS*PGAVAH
Trigger: GTGAGCCACTGCGCCTGGCCATGAGTCTTGTTGAAA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTCACTACACTCCAGCCTaGGCTATAGAGCGACACTCA +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVHYTPA*AIERHS
Trigger: TGAGTGTCGCTCTATAGCCCAGGCTGGAGTGTAGTG...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAAAGAGTGCCTTCTTATaGCAGGTCTGGCCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLKSAFL*QVWPGE
Trigger: CTCCCCAGGCCAGACCTGTCATAAGAAGGCACTCTT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGCAACAGACTTATCACTaGCTACATTTCCCGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SEINACGTIWRCTPEDSGQQTYH*LHFPGF
Trigger: GAAACCCGGGAAATGTAGTCAGTGATAAGTCTGTTG...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAATACCGAGTGAAGTCTaGCTTGGCATCGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PFYITLACIGPKNVLTNEIPSEV*LGIGLP
Trigger: GGGGAGCCCGATGCCAAGTCAGACTTCACTCGGTAT...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACATTCCAATGGAAACTaGACTAAGCAGGGACTCCAT +
Preference number: 2 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRHSNGN*TKQGLH
Trigger: ATGGAGTCCCTGCTTAGTGCAGTTTCCATTGGAATG...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGCCATGCTCAGAACGCTaGAGTCTAAGGATGAACTTC +
Preference number: 2 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILPCSER*SLRMNF
Trigger: GAAGTTCATCCTTAGACTGCAGCGTTCTGAGCATGG...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACGGAAAGTACCCCGCATaGGAAGTAGTGTTTGTCTTA +
Preference number: 2 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNGKYPA*EVVFVL
Trigger: TAAGACAAACACTACTTCCCATGCGGGGTACTTTCC...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGGGTTTCACCATGTTaGCCAGGGTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRVSPC*PGWSQT
Trigger: AGTTTGAGACCACCCTGGCCAACATGGTGAAACCCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTACAACAGCTCAGGACTaGAAAGTGAGAGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSTTAQD*KVRAET
Trigger: TGTTTCAGCTCTCACTTTCCAGTCCTGAGCTGTTGT...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 90 bp CTGGGTTCCCAGGCTTACAAGGGCAATGACTGGGGATCTCATTCATaGTCATACTCTGTCTACACGAAATATTCAGCAGGTGTCAAGTCT +
Preference number: 2 (lower is better)
Translates to: LGSQAYKGNDWGSHS*SYSVYTKYSAGVKS
Trigger: AGACTTGACACCTGCTGAATATTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTAAGCCTGGGAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACGACTACACAATATCTaGTGTCCTCTGCTAGGATTA +
Preference number: 2 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRRLHNI*CPLLGL
Trigger: TAATCCTAGCAGAGGACATCAGATATTGTGTAGTCG...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGAAGGTGCATGGTACAGTaGAGCTGCAAAAATGGAAGC +
Preference number: 2 (lower is better)
Translates to: TGYCLTELHKEPADPIIGRCMVQ*SCKNGS
Trigger: GCTTCCATTTTTGCAGCTGCACTGTACCATGCACCT...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTATCCTGCCTCTTAAAGTaGAAGGGACCTGAGGGACGA +
Preference number: 2 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLSCLLK*KGPEGR
Trigger: TCGTCCCTCAGGTCCCTTGCACTTTAAGAGGCAGGA...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGGTGTCAGGAACAGTGTaGAGTCTTAAAGTACTGCAT +
Preference number: 2 (lower is better)
Translates to: SEINACGTIWRCTPEDSGVSGTV*SLKVLH
Trigger: ATGCAGTACTTTAAGACTGCACACTGTTCCTGACAC...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCCAAGACAAGGTCCCTaGTATGTGTCCCGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTPRQGP*YVSRGE
Trigger: TTCTCCTCGGGACACATAGCAGGGACCTTGTCTTGG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGGTGAACAAGGGAAGATaGCCTCATGTTTCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILVNKGR*PHVSFA
Trigger: TGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCAC...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACGGGAAAAGTTGCGACTaGGTGACAAATTCATTAGGT +
Preference number: 2 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNGKSCD*VTNSLG
Trigger: ACCTAATGAATTTGTCACCCAGTCGCAACTTTTCCC...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATACACCGGAGGACAGTaGGACATGCCATCTGGCAGT +
Preference number: 2 (lower is better)
Translates to: PFYITLACIGPKNVLTNEYTGGQ*DMPSGS
Trigger: ACTGCCAGATGGCATGTCCCACTGTCCTCCGGTGTA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACCATTCTCAAAGTTCATaGCCTCTCTACTTTAGGTCA +
Preference number: 2 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNHSQSS*PLYFRS
Trigger: TGACCTAAAGTAGAGAGGTCATGAACTTTGAGAATG...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTAGGTCCCAGGTCCCATaGGAACTAACCCAACAATTT +
Preference number: 2 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGRSQVP*ELTQQF
Trigger: AAATTGTTGGGTTAGTTCTCATGGGACCTGGGACCT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGATCAATCCCATTTTTaGCTGAGCTTCCAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSDQSHF*LSFQSS
Trigger: AGAACTTTGGAAGCTCAGGCAAAAATGGGATTGATC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTCTCAATGAGTCATTCTaGTGTTGGGGCAGAAGAATG +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVLNESF*CWGRRM
Trigger: CATTCTTCTGCCCCAACAGCAGAATGACTCATTGAG...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGAAACAAGGGGTTGCTCTaGAAGAACCTTTCTAGTCAC +
Preference number: 2 (lower is better)
Translates to: TGYCLTELHKEPADPIIGNKGLL*KNLSSH
Trigger: GTGACTAGAAAGGTTCTTCCAGAGCAACCCCTTGTT...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACCTAACCGTGAAAAATaGGTCCACAGGCACCCTCTT +
Preference number: 2 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLPNREK*VHRHPL
Trigger: AAGAGGGTGCCTGTGGACCCATTTTTCACGGTTAGG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 90 bp AATGAATTGCACTATTCAGATGCACAGCACTCCTTTTGCACAAAGTaGTGTTCTGAGGTGCCAGGACATCCAAGCACTTGCAGTGTCAAT +
Preference number: 2 (lower is better)
Translates to: NELHYSDAQHSFCTK*CSEVPGHPSTCSVN
Trigger: ATTGACACTGCAAGTGCTTGGATGTCCTGGCACCTCAGAACACAACTTTGTGCAAAAGGAGTGCTGTGCATCTGAATAGTGCAATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGACCTGGCAATACTGTTaGAGCAAAATACTCAACACA +
Preference number: 2 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILTWQYC*SKILNT
Trigger: TGTGTTGAGTATTTTGCTTCAACAGTATTGCCAGGT...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGAGAACTAAGGAGCTATaGCGTCTAAAAGAATCAGAG +
Preference number: 2 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILRTKEL*RLKESE
Trigger: CTCTGATTCTTTTAGACGTCATAGCTCCTTAGTTCT...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGTTACTTTGTTTTAGATaGCCTGTACTATGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: SEINACGTIWRCTPEDSGLLCFR*PVLWPK
Trigger: TTTGGGCCATAGTACAGGTCATCTAAAACAAAGTAA...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAATCCCATTTTTGCCTaGGCTTCCAAAGTTCTGACA +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVNPIFA*ASKVLT
Trigger: TGTCAGAACTTTGGAAGCTCAGGCAAAAATGGGATT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTTGATAAAAACTATTTaGGGCCAGCACAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVLIKTI*GQHSGS
Trigger: TGAGCCACTGTGCTGGCCTCAAATAGTTTTTATCAA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGAAGAGAAGGGAAAAGTTaGGACTGGGTGACAAATTCA +
Preference number: 2 (lower is better)
Translates to: TGYCLTELHKEPADPIIGREGKS*DWVTNS
Trigger: TGAATTTGTCACCCAGTCGCAACTTTTCCCTTCTCT...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGATTAATACTTCAGCCATaGTCAGAACGCTGCAGTCTA +
Preference number: 2 (lower is better)
Translates to: TGYCLTELHKEPADPIIGLILQP*SERCSL
Trigger: TAGACTGCAGCGTTCTGAGCATGGCTGAAGTATTAA...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGAGAATGTGCTGAATaGCTCAATGGCTCAATGAGT +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRECAE*LNGSMS
Trigger: ACTCATTGAGCCATTGAGCCATTCAGCACATTCTCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 90 bp ATATCACCTTTCACAAAGGAGACTGGCTTGGAGAAGTCAAGCATGTaGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATG +
Preference number: 2 (lower is better)
Translates to: ISPFTKETGLEKSSM*PKVTEENSLYTKTM
Trigger: CATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAAAGGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTATTTCCCACCTTACTTaGCTGTCATGGACCATTAGA +
Preference number: 2 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGISHLT*LSWTIR
Trigger: TCTAATGGTCCATGACAGGCAAGTAAGGTGGGAAAT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAAGGCATCATGGCTCATaGCAGTATTCCCAACACTTC +
Preference number: 2 (lower is better)
Translates to: PFYITLACIGPKNVLTNERHHGS*QYSQHF
Trigger: GAAGTGTTGGGAATACTGGCATGAGCCATGATGCCT...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTCTCCAGTGTGATAGCTaGAATTTAAAATGTGACCCT +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVLQCDS*NLKCDP
Trigger: AGGGTCACATTTTAAATTGCAGCTATCACACTGGAG...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGCCTACAGGGTTACTCTaGGGACAGTTTAATAATAAT +
Preference number: 2 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILPTGLL*GQFNNN
Trigger: ATTATTATTAAACTGTCCCCAGAGTAACCCTGTAGG...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTACCTTAAGAGAAGCATaGAATGACCCACAACCCTCT +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTTLREA*NDPQPS
Trigger: AGAGGGTTGTGGGTCATTCCATGCTTCTCTTAAGGT...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACACTTGTCTTAAACAGTaGACAAGGGAAGATGGCCTC +
Preference number: 2 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYTCLKQ*TREDGL
Trigger: GAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGT...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTAAGAGAAGCATGGAATaGCCCACAACCCTCTTAATA +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTKRSME*PTTLLI
Trigger: TATTAAGAGGGTTGTGGGTCATTCCATGCTTCTCTT...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTGCAAGAGTGAATTGTaGCATTGTATTTACCCTAAC +
Preference number: 2 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVCKSEL*HCIYPN
Trigger: GTTAGGGTAAATACAATGTCACAATTCACTCTTGCA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACTATATAGAAACCAGGTaGATGGTACAGTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYYIETR*MVQCSC
Trigger: GCAGCTGCACTGTACCATGCACCTGGTTTCTATATA...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACTAATTACTTCTACCTaGTTAGCCATCTGCGTGATC +
Preference number: 2 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLLITST*LAICVI
Trigger: GATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTGAAAGAACTACGGTTTaGCAGAGAGAACAAGATCTC +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTERTTV*QREQDL
Trigger: GAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTC...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCTTGGCCTCCCAAAGTaGCGGCATTATAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSLGLPK*RHYRCE
Trigger: CTCACACCTATAATGCCGGCACTTTGGGAGGCCAAG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAGGCGATGGACATGGTaGCTCAATCTGATTCCCTGG +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSRRWTW*LNLIPW
Trigger: CCAGGGAATCAGATTGAGGCACCATGTCCATCGCCT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACATGTTGAGGATCAAGTaGCTTTCAAGCAGCATGGTG +
Preference number: 2 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYMLRIK*LSSSMV
Trigger: CACCATGCTGCTTGAAAGCCACTTGATCCTCAACAT...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTGAGGGCAGAGGGGGCTaGCTTGCCCTTTTTACTATT +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSEGRGG*LALFTI
Trigger: AATAGTAAAAAGGGCAAGCCAGCCCCCTCTGCCCTC...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAGATCCAGAAGATTTCTaGTCTCAAGTATGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: VILLLGQKNESNLKLHLRDPEDF*SQVCCL
Trigger: TAAACAGCATACTTGAGACCAGAAATCTTCTGGATC...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTTCAGGCAGGCCAATGTaGCAGAAGAGAAGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSSGRPM*QKRSQG
Trigger: ACCTTGGCTTCTCTTCTGCCACATTGGCCTGCCTGA...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 90 bp TTGGCCATCCCTCTCACTATAAAGGAAGTTAGCCAGTTTTCACTGTaGAATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTA +
Preference number: 2 (lower is better)
Translates to: LAIPLTIKEVSQFSL*NGNLQAQSHNYSSL
Trigger: TAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATTCAACAGTGAAAACTGGCTAACTTCCTTTATAGTGAGAGGGATGGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTACTGTCTTAACCACATaGATTAGAGGTATGAACCCT +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTTVLTT*IRGMNP
Trigger: AGGGTTCATACCTCTAATTCATGTGGTTAAGACAGT...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAAATCTAACATACAGATaGCTAGGTCCCATAGGACAC +
Preference number: 2 (lower is better)
Translates to: PFYITLACIGPKNVLTNENLTYR*LGPIGH
Trigger: GTGTCCTATGGGACCTAGTCATCTGTATGTTAGATT...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAATGGTACAGTGCAGCTaGAAAAATGGAAGCCAAATC +
Preference number: 2 (lower is better)
Translates to: IPHRYAIFHDLFCISASTMVQCS*KNGSQI
Trigger: GATTTGGCTTCCATTTTTGCAGCTGCACTGTACCAT...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAAGCAGCAGAGCAAATaGACAGTTCAGGGAGGCTAC +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSKQQSK*TVQGGY
Trigger: GTAGCCTCCCTGAACTGTGCATTTGCTCTGCTGCTT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAACACTAAGGAGCTGCTaGTGTCTTGTAACTCACAAA +
Preference number: 2 (lower is better)
Translates to: PFYITLACIGPKNVLTNETLRSC*CLVTHK
Trigger: TTTGTGAGTTACAAGACAGCAGCAGCTCCTTAGTGT...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATATAAATTACAGTACCTaGCAGGCTGACATCAGTTCT +
Preference number: 2 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDINYST*QADISS
Trigger: AGAACTGATGTCAGCCTGCCAGGTACTGTAATTTAT...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTGTCAGAAGTTTTTCCTaGGGGAAATCATTACGCTTC +
Preference number: 2 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSVRSFS*GKSLRF
Trigger: GAAGCGTAATGATTTCCCTCAGGAAAAACTTCTGAC...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAGGAACAGATTCAATATaGGAAAATGTAGTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKGTDSI*ENVVGV
Trigger: AACTCCCACTACATTTTCTCATATTGAATCTGTTCC...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTGCTAGAGAATCTCCATaGGATTCCATCTTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: VFPEGNHYASTAELHVYSARESP*DSIFSR
Trigger: TCTGGAAAAGATGGAATCGCATGGAGATTCTCTAGC...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTTTAAGGAGAGACAACTaGATCAAATATTACCATGCG +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTLRRDN*IKYYHA
Trigger: CGCATGGTAATATTTGATGCAGTTGTCTCTCCTTAA...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTCTTACTTGCCTGTCATaGACCATTAGAAATATAACA +
Preference number: 2 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGLTCLS*TIRNIT
Trigger: TGTTATATTTCTAATGGTCCATGACAGGCAAGTAAG...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTAAATGTAGTGGGAGTTaGAGAATACAGTTTTTCGAG +
Preference number: 2 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTKCSGS*RIQFFE
Trigger: CTCGAAAAACTGTATTCTCCAACTCCCACTACATTT...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCAGAGGGGGCTGGCTTaGCCTTTTTACTATTATGTA +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSQRGLA*PFYYYV
Trigger: TACATAATAGTAAAAAGGGCAAGCCAGCCCCCTCTG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTTCAACACTAAGGAGCTaGTGCTGTCTTGTAACTCAC +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSSTLRS*CCLVTH
Trigger: GTGAGTTACAAGACAGCAGCAGCTCCTTAGTGTTGA...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACGTGCAGCTGCAAAAATaGAAGCCAAATCATGTTTTT +
Preference number: 2 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYVQLQK*KPNHVF
Trigger: AAAAACATGATTTGGCTTCCATTTTTGCAGCTGCAC...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAGCTGTGAGTAATTACTaGAAAAACCCTTACACTGAT +
Preference number: 2 (lower is better)
Translates to: IPHRYAIFHDLFCISASTAVSNY*KNPYTD
Trigger: ATCAGTGTAAGGGTTTTTCCAGTAATTACTCACAGC...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTAATTGTTATCCAACGTaGAAAGAGGAGCAAGAACCA +
Preference number: 2 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSNCYPT*KEEQEP
Trigger: TGGTTCTTGCTCCTCTTTCCACGTTGGATAACAATT...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR TCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTCCATCTTTTCCAGAATaGGATTCCAAACTGAACTTT +
Preference number: 2 (lower is better)
Translates to: VFPEGNHYASTAELHVYSPSFPE*DSKLNF
Trigger: AAAGTTCAGTTTGGAATCTCATTCTGGAAAAGATGG...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCCATGTCCTTGTGCTTaGCAAACGCATGAATTTAGA +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSPCPCA*QTHEFR
Trigger: TCTAAATTCATGCGTTTGGCAAGCACAAGGACATGG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATTCTGGTCTCAAGTATaGTGTTTACATAAAAACGAG +
Preference number: 2 (lower is better)
Translates to: PFYITLACIGPKNVLTNEFWSQV*CLHKNE
Trigger: CTCGTTTTTATGTAAACAGCATACTTGAGACCAGAA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTACTAGTCTGTCAACATaGGACAAGCTCAAGATCTTA +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSTSLST*DKLKIL
Trigger: TAAGATCTTGAGCTTGTCTCATGTTGACAGACTAGT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTTTCTCCTTAATACACTaGTGTTCTCACAAACCAGTA +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSFSLIH*CSHKPV
Trigger: TACTGGTTTGTGAGAACATCAGTGTATTAAGGAGAA...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAGAAACTGGCATTCTTaGATTGGAAATGAATTGCAC +
Preference number: 2 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSRNWHS*IGNELH
Trigger: GTGCAATTCATTTCCAATGCAAGAATGCCAGTTTCT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp GCAAGGCAGCTAGCCCTGGAGGTGAGAAGACACCGTTaGTCCACCAGCGCAGGTGCAGGGCCCTCTGCAGAT +
Preference number: 3 (lower is better)
Translates to: ARQLALEVRRHR*STSAGAGPSAD
Trigger: ATCTGCAGAGGGCCCTGCACCTGCGCTGGTGGATCAACGGTGTCTTCTCACCTCCAGGGCTAGCTGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp CTCATCCCATCAAACCCAACAGCACAACACACGGTCTaGCAGCCAGCCTGGGTGCTCGGGCCTGCTCGTCTC +
Preference number: 3 (lower is better)
Translates to: LIPSNPTAQHTV*QPAWVLGPARL
Trigger: GAGACGAGCAGGCCCGAGCACCCAGGCTGGCTGTCAGACCGTGTGTTGTGCTGTTGGGTTTGATGGGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR GCA 72 bp GGAGGTGAGAAGACACCGTTGATCCACCAGCGCAGGTaGAGGGCCCTCTGCAGATTTGTTCCACCAGTGTAT +
Preference number: 3 (lower is better)
Translates to: GGEKTPLIHQRR*RALCRFVPPVY
Trigger: ATACACTGGTGGAACAAATCTGCAGAGGGCCCTGCACCTGCGCTGGTGGATCAACGGTGTCTTCTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp GGCCCCATTTCAAAATCATCTCTTGGCGTCTTGCACTaGCCTCTGAGGCTGACTAGCCCTCTGGGTTGGATG +
Preference number: 3 (lower is better)
Translates to: GPISKSSLGVLH*PLRLTSPLGWM
Trigger: CATCCAACCCAGAGGGCTAGTCAGCCTCAGAGGCCAGTGCAAGACGCCAAGAGATGATTTTGAAATGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CCA 72 bp GTATTCCCAACACTTCGGAAGGTCGAGGTTGGGGTATaGCTTGCACCCATGAGTTCGAGACCAGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: VFPTLRKVEVGV*LAPMSSRPAWT
Trigger: TGTCCAGGCTGGTCTCGAACTCATGGGTGCAAGCCATACCCCAACCTCGACCTTCCGAAGTGTTGGGAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp CATGCCAGTATTCCCAACACTTCGGAAGGTCGAGGTTaGGGTATGGCTTGCACCCATGAGTTCGAGACCAGC +
Preference number: 3 (lower is better)
Translates to: HASIPNTSEGRG*GMACTHEFETS
Trigger: GCTGGTCTCGAACTCATGGGTGCAAGCCATACCCCAACCTCGACCTTCCGAAGTGTTGGGAATACTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp ACGAGTGAAAGTGGGGCTTTGAATAAACATACCGAGTaGAGTCTGACTTGGCATCGGGCTCCCCACCCTAGG +
Preference number: 3 (lower is better)
Translates to: TSESGALNKHTE*SLTWHRAPHPR
Trigger: CCTAGGGTGGGGAGCCCGATGCCAAGTCAGACTTCACTCGGTATGTTTATTCAAAGCCCCACTTTCACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp TTGCACTGGCCTCTGAGGCTGACTAGCCCTCTGGGTTaGATGTTGGCCATCCCTCTCACTATAAAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: LHWPLRLTSPLG*MLAIPLTIKEV
Trigger: AACTTCCTTTATAGTGAGAGGGATGGCCAACATCCAACCCAGAGGGCTAGTCAGCCTCAGAGGCCAGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACAACCTGGCAATACTGTaGAAGCAAAATACTCAACAC +
Preference number: 3 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHNLAIL*KQNTQH
Trigger: GTGTTGAGTATTTTGCTTCAACAGTATTGCCAGGTT...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTGGGAGGCTACAGAGATaGGGAGCCCTGAAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTGRLQR*GALKQG
Trigger: GCCTTGCTTCAGGGCTCCCAATCTCTGTAGCCTCCC...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp AGACAACTCAGGCCCAGTGGGGTTAACTCCAAGCCCTaGAGTCAAGAATGTCATCAAAATCAGTTTGGGAAC +
Preference number: 3 (lower is better)
Translates to: RQLRPSGVNSKP*SQECHQNQFGN
Trigger: GTTCCCAAACTGATTTTGATGACATTCTTGACTGCAGGGCTTGGAGTTAACCCCACTGGGCCTGAGTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp AAGTTGTGTTCTGAGGTGCCAGGACATCCAAGCACTTaGAGTGTCAATGTCGTGTTTAAGATGTACCAGGGG +
Preference number: 3 (lower is better)
Translates to: KLCSEVPGHPST*SVNVVFKMYQG
Trigger: CCCCTGGTACATCTTAAACACGACATTGACACTGCAAGTGCTTGGATGTCCTGGCACCTCAGAACACAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAAGGCAGGAGAATCGCTaGAACCCAGAGGTAGAGGTC +
Preference number: 3 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLRQENR*NPEVEV
Trigger: GACCTCTACCTCTGGGTTCAAGCGATTCTCCTGCCT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTGCAGAGGGGGCTGGCTaGCCCTTTTTACTATTATGT +
Preference number: 3 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVAEGAG*PFLLLC
Trigger: ACATAATAGTAAAAAGGGCAAGCCAGCCCCCTCTGC...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTGGGTCCCCACTGTGTaGTATTCACTTAGCAGACCT +
Preference number: 3 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVWVPTV*YSLSRP
Trigger: AGGTCTGCTAAGTGAATACAACACAGTGGGGACCCA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGAGATAGCACTGGGTaGGACAGGGCAACTCTGAAT +
Preference number: 3 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRDSTG*DRATLN
Trigger: ATTCAGAGTTGCCCTGTCCAACCCAGTGCTATCTCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAAGGTCACTTTTAGCCTaGGAACGGATATATGTTTGC +
Preference number: 3 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRRSLLA*ERIYVC
Trigger: GCAAACATATATCCGTTCCAAGGCTAAAAGTGACCT...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAATTGGTTGGGCTGTATTaGATGGGGGTAGGGGTAAGG +
Preference number: 3 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKLVGLY*MGVGVR
Trigger: CCTTACCCCTACCCCCATCAAATACAGCCCAACCAA...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGAGGGTTTCACCATGTaGGCCAGGGTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: PFYITLACIGPKNVLTNEEGFTM*ARVVSN
Trigger: GTTTGAGACCACCCTGGCCAACATGGTGAAACCCTC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAACGAGAGGTCCAGATTaGGAAGTGAAGACATGGGAA +
Preference number: 3 (lower is better)
Translates to: VILLLGQKNESNLKLHLRTRGPD*EVKTWE
Trigger: TTCCCATGTCTTCACTTCCAAATCTGGACCTCTCGT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp GTTTCTCCAGCAATACTAAAATCCCTTAGCCAAGAGTaGCTTCTTATGACAGGTCTGGCCTGGGGAGATAGA +
Preference number: 3 (lower is better)
Translates to: VSPAILKSLSQE*LLMTGLAWGDR
Trigger: TCTATCTCCCCAGGCCAGACCTGTCATAAGAAGGCACTCTTGGCTAAGGGATTTTAGTATTGCTGGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp ACAGCACCGAATCTGCCATATAGAGAATGTGCTGAATaGCTCAATGGCTCAATGAGTCATTCTGCTGTTGGG +
Preference number: 3 (lower is better)
Translates to: TAPNLPYRECAE*LNGSMSHSAVG
Trigger: CCCAACAGCAGAATGACTCATTGAGCCATTGAGCCATTCAGCACATTCTCTATATGGCAGATTCGGTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp AAACTTGACTTGCTACGTCACAGGCTACTGTCTAACTaGACTTCACAAGGAGCCTGCAGATCCCATTATAGG +
Preference number: 3 (lower is better)
Translates to: KLDLLRHRLLSN*TSQGACRSHYR
Trigger: CCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGTGACGTAGCAAGTCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 72 bp CCAGACCTGGTAGTAGAGTCAGCATTCAAACCCACGTaGTATCAAGCAAAAAGTCTTCCTTCATACGAGCAG +
Preference number: 3 (lower is better)
Translates to: PDLVVESAFKPT*YQAKSLPSYEQ
Trigger: CTGCTCGTATGAAGGAAGACTTTTTGCTTGATATCACGTGGGTTTGAATGCTGACTCTACTACCAGGTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 72 bp GGCTCAATGAGTCATTCTGCTGTTGGGGCAGAAGAATaGGTCCAACCTGAAACTTCATCTGAGATAAATGCC +
Preference number: 3 (lower is better)
Translates to: GSMSHSAVGAEE*VQPETSSEINA
Trigger: GGCATTTATCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGACTCATTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp TCACAAAGGAGACTGGCTTGGAGAAGTCAAGCATGTTaGCCAAGGTTACCGAGGAAAATAGCCTATACACAA +
Preference number: 3 (lower is better)
Translates to: SQRRLAWRSQAC*PRLPRKIAYTQ
Trigger: TTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp CACACACCTCAAATATTCCAAAGGGAGGCTAGAAGCTaGCCTTATGGGGTAAGGTCATCTAAACCATCAAAG +
Preference number: 3 (lower is better)
Translates to: HTPQIFQREARS*PYGVRSSKPSK
Trigger: CTTTGATGGTTTAGATGACCTTACCCCATAAGGCCAGCTTCTAGCCTCCCTTTGGAATATTTGAGGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CCA 72 bp GTCACTTCTGCCAAAGGAAGTATAAATACCCAACACTaGCTACGATGTAAGGGAACAGGCGCTCTTACTTTC +
Preference number: 3 (lower is better)
Translates to: VTSAKGSINTQH*LRCKGTGALTF
Trigger: GAAAGTAAGAGCGCCTGTTCCCTTACATCGTAGCCAGTGTTGGGTATTTATACTTCCTTTGGCAGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGATACTGGACTACAAGTTaGCAAGGAAACATTTTTCAC +
Preference number: 3 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRYWTTS*QGNIFH
Trigger: GTGAAAAATGTTTCCTTGCAAACTTGTAGTCCAGTA...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR TCA 72 bp TCTGAATCAGGGTCAGCAACTTGCAGAGACCACCTATaGTATGCTACGAGTGAAAGTGGGGCTTTGAATAAA +
Preference number: 3 (lower is better)
Translates to: SESGSATCRDHL*YATSESGALNK
Trigger: TTTATTCAAAGCCCCACTTTCACTCGTAGCATATCATAGGTGGTCTCTGCAAGTTGCTGACCCTGATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAACAAAGGAGACTGGCTaGGAGAAGTCAAGCATGTTG +
Preference number: 3 (lower is better)
Translates to: PFYITLACIGPKNVLTNETKETG*EKSSML
Trigger: CAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGT...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp ACCCTTTCACCTAACCCTCATGATTATACCTCAGAATaGAGGCAGACTAGATTTCAATCCAACCCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: TLSPNPHDYTSE*RQTRFQSNPFQ
Trigger: CTGGAAAGGGTTGGATTGAAATCTAGTCTGCCTTCATTCTGAGGTATAATCATGAGGGTTAGGTGAAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp AAACCAAAAAGGCCTCGGCAATCAACACTAAGGAGCTaGTGCTGTCTTGTAACTCACAAAGTACTGCTTAAA +
Preference number: 3 (lower is better)
Translates to: KPKRPRQSTLRS*CCLVTHKVLLK
Trigger: TTTAAGCAGTACTTTGTGAGTTACAAGACAGCAGCAGCTCCTTAGTGTTGATTGCCGAGGCCTTTTTGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp ATGTCTTGTAAGTATATCACCTTTCACAAAGGAGACTaGCTTGGAGAAGTCAAGCATGTTGCCCAAGGTTAC +
Preference number: 3 (lower is better)
Translates to: MSCKYITFHKGD*LGEVKHVAQGY
Trigger: GTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAAAGGTGATATACTTACAAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGATTGCCTATGATGATCTaGCTAACGACTACACAATAT +
Preference number: 3 (lower is better)
Translates to: TGYCLTELHKEPADPIIGLPMMI*LTTTQY
Trigger: ATATTGTGTAGTCGTTAGCAAGATCATCATAGGCAA...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTCAGAGAAGGGAAAAGTaGCGACTGGGTGACAAATTC +
Preference number: 3 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSQRREK*RLGDKF
Trigger: GAATTTGTCACCCAGTCGCAACTTTTCCCTTCTCTG...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTCCTTCAACTGTATCATaGCTTAAAACTCCCAAAGTT +
Preference number: 3 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVPSTVS*LKTPKV
Trigger: AACTTTGGGAGTTTTAAGCAATGATACAGTTGAAGG...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp ATTAATTCTCAAGGCGATGGACATGGTGCCTCAATCTaGTTCCCTGGGTTTAGATACTTCACTGTCTACTAT +
Preference number: 3 (lower is better)
Translates to: INSQGDGHGASI*FPGFRYFTVYY
Trigger: ATAGTAGACAGTGAAGTATCTAAACCCAGGGAATCAGATTGAGGCACCATGTCCATCGCCTTGAGAATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTaGATCTCAGCTAGCACAGGGAAACCCTTGAAAAAC +
Preference number: 3 (lower is better)
Translates to: IPHRYAIFHDLF*ISASTGKPLKN
Trigger: GTTTTTCAAGGGTTTCCCTGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR GCA 72 bp TTAAACATTTTAATACTTCAGCCATGCTCAGAACGCTaGAGTCTAAGGATGAACTTCAACTTGCCCATGCCA +
Preference number: 3 (lower is better)
Translates to: LNILILQPCSER*SLRMNFNLPMP
Trigger: TGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCTGAGCATGGCTGAAGTATTAAAATGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR GCA 72 bp ATTCATGACCTAATTACTTCTACCTGCTTAGCCATCTaGGTGATCCATCTTTCCATCATGGTTTCAAGCAAG +
Preference number: 3 (lower is better)
Translates to: IHDLITSTCLAI*VIHLSIMVSSK
Trigger: CTTGCTTGAAACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGGTCATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp AACAGTATATCTGGACCTAAACCTAACCGTGAAAAATaGGTCCACAGGCACCCTCTTAACCATTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: NSISGPKPNREK*VHRHPLNHFSK
Trigger: TTTGGAAAAATGGTTAAGAGGGTGCCTGTGGACCCATTTTTCACGGTTAGGTTTAGGTCCAGATATACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAGGAACGGATATATGTTaGCCTATGATGATCTTGCTA +
Preference number: 3 (lower is better)
Translates to: IPHRYAIFHDLFCISASTGTDIC*PMMILL
Trigger: TAGCAAGATCATCATAGGCAAACATATATCCGTTCC...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATGGGCCTTGAGATCCTaGGTCTATTTTTACAGTAAA +
Preference number: 3 (lower is better)
Translates to: PFYITLACIGPKNVLTNEWALRS*VYFYSK
Trigger: TTTACTGTAAAAATAGACCAAGGATCTCAAGGCCCA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp GTATTAGACAGCAACAAGCAACAACAGACTTATCACTaGCTACATTTCCCGGGTTTCTCCAGCAATACTAAA +
Preference number: 3 (lower is better)
Translates to: VLDSNKQQQTYH*LHFPGFSSNTK
Trigger: TTTAGTATTGCTGGAGAAACCCGGGAAATGTAGTCAGTGATAAGTCTGTTGTTGCTTGTTGCTGTCTAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp GCCCTATTACTTCACCACAACACTGTCTTAACCACATaGATTAGAGGTATGAACCCTAAGAGTAAGAATGCA +
Preference number: 3 (lower is better)
Translates to: ALLLHHNTVLTT*IRGMNPKSKNA
Trigger: TGCATTCTTACTCTTAGGGTTCATACCTCTAATTCATGTGGTTAAGACAGTGTTGTGGTGAAGTAATAGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGTCATCAAAATCAGTTaGGGAACTAAAACCAAGTGT +
Preference number: 3 (lower is better)
Translates to: PFYITLACIGPKNVLTNEVIKIS*GTKTKC
Trigger: ACACTTGGTTTTAGTTCCCAAACTGATTTTGATGAC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp CCACAAAGTGATCCAGAAGATTTCTGGTCTCAAGTATaGTGTTTACATAAAAACGAGTTACCAGTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: PQSDPEDFWSQV*CLHKNELPVVG
Trigger: ACCAACAACTGGTAACTCGTTTTTATGTAAACAGCATACTTGAGACCAGAAATCTTCTGGATCACTTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp CAAGAGATAAACAGTATGGGTAGGATACCTAACCAATaGTTAAGACTGGATCATAAGGGTCTTGTAATACCA +
Preference number: 3 (lower is better)
Translates to: QEINSMGRIPNQ*LRLDHKGLVIP
Trigger: TGGTATTACAAGACCCTTATGATCCAGTCTTAACCATTGGTTAGGTATCCTACCCATACTGTTTATCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp ACAGACAACGTAACCAACTTCACTAGTCTGTCAACATaGGACAAGCTCAAGATCTTAGCAAGAGTAATATTT +
Preference number: 3 (lower is better)
Translates to: TDNVTNFTSLST*DKLKILARVIF
Trigger: AAATATTACTCTTGCTAAGATCTTGAGCTTGTCTCATGTTGACAGACTAGTGAAGTTGGTTACGTTGTCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp AAATTTTATCGCAGGTTCAAGACAATTTTGCATTACTaGTGTTGGAAGCTTTATGTCCGACCTCCACAAACT +
Preference number: 3 (lower is better)
Translates to: KFYRRFKTILHY*CWKLYVRPPQT
Trigger: AGTTTGTGGAGGTCGGACATAAAGCTTCCAACATCAGTAATGCAAAATTGTCTTGAACCTGCGATAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR GCA 72 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATaGAGTCTACATGTTTACATTTACCATAAGGAAAGT +
Preference number: 3 (lower is better)
Translates to: KVHDLSTLGHLE*SLHVYIYHKES
Trigger: ACTTTCCTTATGGTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR GCA 72 bp AAAACAACATTGGGGTTTCAGGAAAGAACTACGGTTTaGCAGAGAGAACAAGATCTCTACAGGTATTATAAA +
Preference number: 3 (lower is better)
Translates to: KTTLGFQERTTV*QREQDLYRYYK
Trigger: TTTATAATACCTGTAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR TCA 72 bp AACAGAGTAAAAAGATACCTTAAGAGAAGCATGGAATaGCCCACAACCCTCTTAATAAAGGAAGAAAATCAC +
Preference number: 3 (lower is better)
Translates to: NRVKRYLKRSME*PTTLLIKEENH
Trigger: GTGATTTTCTTCCTTTATTAAGAGGGTTGTGGGTCATTCCATGCTTCTCTTAAGGTATCTTTTTACTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp CATTCACATCCCACCCAGTCAATGAATGAACATTTATaGTTAACTCAGCAAAGTTTCTTCACAGAAAGATAT +
Preference number: 3 (lower is better)
Translates to: HSHPTQSMNEHL*LTQQSFFTERY
Trigger: ATATCTTTCTGTGAAGAAACTTTGCTGAGTTAACCATAAATGTTCATTCATTGACTGGGTGGGATGTGAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CCA 72 bp GCTATCTTAATTGCCTTAATTGTTCTTTTCAGGGGCTaGTTTGAACAAAGGGACATAATTTACAAATTCCAG +
Preference number: 3 (lower is better)
Translates to: AILIALIVLFRG*FEQRDIIYKFQ
Trigger: CTGGAATTTGTAAATTATGTCCCTTTGTTCAAACCAGCCCCTGAAAAGAACAATTAAGGCAATTAAGATAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CCA 72 bp ACTCACCCACAATGTAAAACTCCAAAACCTTCAATTTaGCCTAACTTAGAATTCATAAATTTGGCTAAGCAA +
Preference number: 3 (lower is better)
Translates to: THPQCKTPKPSI*PNLEFINLAKQ
Trigger: TTGCTTAGCCAAATTTATGAATTCTAAGTTAGGCCAAATTGAAGGTTTTGGAGTTTTACATTGTGGGTGAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAGATCCACCTGCCCACTaGCTGCACTCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPDPPAH*LHSAGP
Trigger: AGGACCAGCAGAGTGCAGCCAGTGGGCAGGTGGATC...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCACCAATATCGCGCCAATaGACTCCAGCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPPISRQ*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCATTGGCGCGATATTGG...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAATTAGCTGGGCGTGGTaGCAGGCGCCTACAATCCCA +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPISWAW*QAPTIP
Trigger: TGGGATTGTAGGCGCCTGCCACCACGCCCAGCTAAT...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGCCAGAGGGCCTGCCCTaGGCACCACACAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGPEGLP*APHSRA
Trigger: AGCCCGGCTGTGTGGTGCTCAGGGCAGGCCCTCTGG...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAGGACCAGATAACCGCTaGCGCCCCTCGCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRGPDNR*RPSPRP
Trigger: CGGCCGAGGCGAGGGGCGGCAGCGGTTATCTGGTCC...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCACCAAGACAAGGTCCCTaGTATGTGTCCCGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPPRQGP*YVSRGE
Trigger: TTCTCCTCGGGACACATAGCAGGGACCTTGTCTTGG...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAGAGGGCAGAGGGGGCTaGCTTGCCCTTTTTACTATT +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPEGRGG*LALFTI
Trigger: AATAGTAAAAAGGGCAAGCCAGCCCCCTCTGCCCTC...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACGCACCACTAAGACCATaGAGAGCTATGGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHAPLRP*RAMASR
Trigger: CCGGGAAGCCATAGCTCTGCATGGTCTTAGTGGTGC...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAAGTTGTGTTCTGAGGTaGCAGGACATCCAAGCACTT +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPSCVLR*QDIQAL
Trigger: AAGTGCTTGGATGTCCTGGCACCTCAGAACACAACT...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTGGCAGTGACAGGGCCTaGGGACAGGTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVGSDRA*GQVRQA
Trigger: GGCCTGCCTGACCTGTCCTCAGGCCCTGTCACTGCC...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGGACAGCCAGCCTGGGTaGTCGGGCCTGCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILDSQPG*SGLLVS
Trigger: AGAGACGAGCAGGCCCGAGCACCCAGGCTGGCTGTC...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAGGGGCCCTAAGAAACTaGCATTCTTGCATTGGAAAT +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPGALRN*HSCIGN
Trigger: ATTTCCAATGCAAGAATGCCAGTTTCTTAGGGCCCC...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAAGAGAATGTGCTGAATaGCTCAATGGCTCAATGAGT +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPRECAE*LNGSMS
Trigger: ACTCATTGAGCCATTGAGCCATTCAGCACATTCTCT...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp TGGCCTCTGAGGCTGACTAGCCCTCTGGGTTGGATGTaGGCCATCCCTCTCACTATAAAGGAAGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: WPLRLTSPLGWM*AIPLTIKEVSQ
Trigger: CTGGCTAACTTCCTTTATAGTGAGAGGGATGGCCAACATCCAACCCAGAGGGCTAGTCAGCCTCAGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTATACCGAGTGAAGTCTaGCTTGGCATCGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSIPSEV*LGIGLP
Trigger: GGGGAGCCCGATGCCAAGTCAGACTTCACTCGGTAT...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGTGAGAAGACACCGTTaGTCCACCAGCGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSVRRHR*STSAGA
Trigger: TGCACCTGCGCTGGTGGATCAACGGTGTCTTCTCAC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACCATTCCAATGGAAACTaGACTAAGCAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHHSNGN*TKQGLH
Trigger: ATGGAGTCCCTGCTTAGTGCAGTTTCCATTGGAATG...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCACAAGAAGATGCAGACTaGAACATTCAACAAGCATTC +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPQEDAD*NIQQAF
Trigger: GAATGCTTGTTGAATGTTGCAGTCTGCATCTTCTTG...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGCCCAGTCATCTCACTaGCTCAGTCCAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSAQSSH*LSPAAS
Trigger: ACTGGCTGCTGGACTGAGGCAGTGAGATGACTGGGC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATTCGGGCCCGTGCTCCTaGATCTCGGCCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNSGPCS*ISASPS
Trigger: GGAGGGCGAGGCCGAGATCCAGGAGCACGGGCCCGA...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CAA 72 bp CACTTAGGGGCAAGCAGTGAGGCTAAGGCAGATCACTaGAGGTCAGGTGTTCAAGACCAGCTTCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: HLGASSEAKADH*RSGVQDQLRQH
Trigger: ATGTTGGCGAAGCTGGTCTTGAACACCTGACCTCAAGTGATCTGCCTTAGCCTCACTGCTTGCCCCTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTTGGACAGGGCAACTCTaGATCTCTCCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSWTGQL*ISPSSE
Trigger: CTCACTGGAGGGAGAGATTCAGAGTTGCCCTGTCCA...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAACTCCTGACCTCAGGTaGTTCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRTPDLR*FTRLGL
Trigger: GAGGCCAAGGCGGGTGAATCACCTGAGGTCAGGAGT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACAGCTTCTGCTGCTTGTaGTCGGGCTGCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYSFCCL*SGCAAA
Trigger: GGCCGCCGCGCAGCCCGAGCACAAGCAGCAGAAGCT...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAAGAAACTGGCATTCTTaGATTGGAAATGAATTGCAC +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPRNWHS*IGNELH
Trigger: GTGCAATTCATTTCCAATGCAAGAATGCCAGTTTCT...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACCCAGAGAGAAAGTCCTaGCTGCTGACACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNPERKS*LLTHSV
Trigger: GACCGAGTGTGTCAGCAGCCAGGACTTTCTCTCTGG...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACGACCATGCAGAGCTATaGCTTCCCGGAAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNDHAEL*LPGRVA
Trigger: TGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTC...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACGGGAAAAGTTGCGACTaGGTGACAAATTCATTAGGT +
Preference number: 4 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHGKSCD*VTNSLG
Trigger: ACCTAATGAATTTGTCACCCAGTCGCAACTTTTCCC...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGCACAGAAGTGAGGTATaGACACGTAGGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGHRSEV*TRRGWT
Trigger: AGTCCAGCCCCTACGTGTTCATACCTCACTTCTGTG...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGACCGGTCTCAAACTCCTaGCCTCAGGTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRPVSNS*PQVIHP
Trigger: CGGGTGAATCACCTGAGGTCAGGAGTTTGAGACCGG...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGAAGTGGGTAATATCCTaGCCGGGGGCCCTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGKWVIS*PGALRN
Trigger: GTTTCTTAGGGCCCCCGGTCAGGATATTACCCACTT...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGGCGTGAGCCATGCTaGCCCAGCCATACCATCCAT +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRREPC*PSHTIH
Trigger: ATGGATGGTATGGCTGGGGCAGCATGGCTCACGCCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTATCCACCAGCGCAGGTaGAGGGCCCTCTGCAGATTT +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVIHQRR*RALCRF
Trigger: AAATCTGCAGAGGGCCCTGCACCTGCGCTGGTGGAT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACGTTTTCACTGTTGAATaGAAATCTTCAGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHVFTVE*KSSGPK
Trigger: CTTTGGGCCTGAAGATTTCCATTCAACAGTGAAAAC...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCACTTACTTGCCTGTCATaGACCATTAGAAATATAACA +
Preference number: 4 (lower is better)
Translates to: EVEVAVSQYRANALQPGPLTCLS*TIRNIT
Trigger: TGTTATATTTCTAATGGTCCATGACAGGCAAGTAAG...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGGAAGGCAAAAGCCACTaGGCCTTGAGATCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGEGKSH*ALRSLV
Trigger: GACCAAGGATCTCAAGGCCCAGTGGCTTTTGCCTTC...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACGCACAACACACGGTCTaGCAGCCAGCCTGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYAQHTV*QPAWVL
Trigger: GAGCACCCAGGCTGGCTGTCAGACCGTGTGTTGTGC...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAAGAGTGCCTTCTTATaGCAGGTCTGGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVKSAFL*QVWPGE
Trigger: CTCCCCAGGCCAGACCTGTCATAAGAAGGCACTCTT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTGTTCCCACACACTGCTaGGAGTGTGGGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVVPTHC*ECGFPQ
Trigger: CTGTGGAAACCCACACTCTCAGCAGTGTGTGGGAAC...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATGCCACAGCTTCTGCTaGTTGTGCTCGGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNECHSFC*LCSGCA
Trigger: CGCGCAGCCCGAGCACAAGCAGCAGAAGCTGTGGCA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGGTGACGGCGGTGGCTaGGTTTTGGAAGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEGDGGG*VLEGDP
Trigger: TGGGTCCCCTTCCAAAACGCAGCCACCGCCGTCACC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATCCGGGAGGCAGAGATTaGGGTGAGCTGGGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNPGGRD*GELGSH
Trigger: GTGCGATCCCAGCTCACCGCAATCTCTGCCTCCCGG...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACCTGAAAGGTCACTTCTaGCAAAGGAAGTATAAATAC +
Preference number: 4 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHLKGHF*QRKYKY
Trigger: GTATTTATACTTCCTTTGGCAGAAGTGACCTTTCAG...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGACCACTGGCTGCACTCTaGTGGTCCTGCCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRPLAAL*WSCLLK
Trigger: CTTTAAGAGGCAGGACCAGCAGAGTGCAGCCAGTGG...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAATGACATCGCCACACTaGGCTGAGGTACGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRMTSPH*AEVRFL
Trigger: TAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCAT...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTGTCGAGGTTGGGGTATaGCTTGCACCCATGAGTTCG +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVVEVGV*LAPMSS
Trigger: CGAACTCATGGGTGCAAGCCATACCCCAACCTCGAC...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGACTTTGTAGAGATTGGTaGCGGCGGTGGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: TGYCLTELHKEPADPIIGLCRDW*RRWLRF
Trigger: AAAACGCAGCCACCGCCGTCACCAATCTCTACAAAG...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTCTTTGTAGAGATTGGTaGCGGCGGTGGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVLCRDW*RRWLRF
Trigger: AAAACGCAGCCACCGCCGTCACCAATCTCTACAAAG...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTGGCACGAGAATCATTTaGACCCAGGAGGCGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGGTRII*TQEAEV
Trigger: GACTTCCGCCTCCTGGGTTCAAATGATTCTCGTGCC...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCGTAATCTAGGGCAGTaGCAGGGCCTGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTRNLGQ*QGLRTG
Trigger: ACCTGTCCTCAGGCCCTGTCACTGCCCTAGATTACG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTAGAGATTGGGAGCCCTaGAGCAAGGCTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGRDWEP*SKAVSQ
Trigger: CTGTGACACAGCCTTGCTTCAGGGCTCCCAATCTCT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGACTCTTCCTAACCAGTaGACCAGGGATACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGTLPNQ*TRDTVG
Trigger: ACCAACTGTATCCCTGGTTCACTGGTTAGGAAGAGT...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAACCTGCCTCAGCCTCCTaGGTAGACAGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKPASAS*VDRITG
Trigger: GCCTGTAATCCTGTCTACTCAGGAGGCTGAGGCAGG...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTCACTTGGAGAACCAGTaGTCGGGCCCGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSHLENQ*SGPCSW
Trigger: CCAGGAGCACGGGCCCGAGCACTGGTTCTCCAAGTG...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTTGCCACAGCTTCTGCTaGTTGTGCTCGGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSCHSFC*LCSGCA
Trigger: CGCGCAGCCCGAGCACAAGCAGCAGAAGCTGTGGCA...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATAGGTGCCACAGCTTCTaGTGCTTGTGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNRCHSF*CLCSGC
Trigger: GCAGCCCGAGCACAAGCAGCAGAAGCTGTGGCACCT...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTGGTGACGGCGGTGGCTaGGTTTTGGAAGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSGDGGG*VLEGDP
Trigger: TGGGTCCCCTTCCAAAACGCAGCCACCGCCGTCACC...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACAGGTGCATGGTACAGTaGAGCTGCAAAAATGGAAGC +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNRCMVQ*SCKNGS
Trigger: GCTTCCATTTTTGCAGCTGCACTGTACCATGCACCT...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACCTGAGGCATGAAAATTaGTTGAACCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNLRHEN*LNPGGR
Trigger: TCTGCCTCCTGGGTTCAAGCAATTTTCATGCCTCAG...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGGCGATGGACATGGTaGCTCAATCTGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRRWTW*LNLIPW
Trigger: CCAGGGAATCAGATTGAGGCACCATGTCCATCGCCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTTACAGGCGTGAGCCATaGTGCCCCAGCCATACCATC +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTYRREP*CPSHTI
Trigger: GATGGTATGGCTGGGGCAGCATGGCTCACGCCTGTA...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAGCGGTGGCTGCGTTTTaGAAGGGGACCCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKAVAAF*KGTQRE
Trigger: TTCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGC...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATGAGATTGCGGTGAGCTaGGATCGCACCACCGCACTC +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNEIAVS*DRTTAL
Trigger: GAGTGCGGTGGTGCGATCCCAGCTCACCGCAATCTC...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAGCCTGTGGGACAATTTaGAGATGTACACCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRACGTI*RCTPED
Trigger: GTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGC...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp CACTATTCAGATGCACAGCACTCCTTTTGCACAAAGTaGTGTTCTGAGGTGCCAGGACATCCAAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: HYSDAQHSFCTK*CSEVPGHPSTC
Trigger: GCAAGTGCTTGGATGTCCTGGCACCTCAGAACACAACTTTGTGCAAAAGGAGTGCTGTGCATCTGAATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATATCGCCACACTGGGCTaGGGTACGCTTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDIATLG*GTLSSS
Trigger: GGAACTAGAAAGCGTACCTCAGCCCAGTGTGGCGAT...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACGCAGCATGGTGGGTGTaGAAATGTTTGCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNAAWWV*KCLQFR
Trigger: TCTAAACTGCAAACATTTTCACACCCACCATGCTGC...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGGAGCTTCCAAAGTTCTaGCAGCCTAACTATTCCACT +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGELPKF*QPNYST
Trigger: AGTGGAATAGTTAGGCTGTCAGAACTTTGGAAGCTC...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAAGCCGGGCTGTGCTGTaGAACATCCCTTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKSRAVL*NIPFCS
Trigger: AGAGCAGAAAGGGATGTTTCACAGCACAGCCCGGCT...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAAATCTCTCCCTCCAGTaGGGAGACAGACAACGTAAC +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRNLSLQ*GDRQRN
Trigger: GTTACGTTGTCTGTCTCCTCACTGGAGGGAGAGATT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTTGCAGAGACCACCTATaGTATGCTACGAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSCRDHL*YATSES
Trigger: ACTTTCACTCGTAGCATATCATAGGTGGTCTCTGCA...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTCTGGGTGCTCGGGCCTaGTCGTCTCTCAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSLGARA*SSLKCC
Trigger: GCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAG...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAGAGGACAGTGGGACATaGCATCTGGCAGTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLEDSGT*HLAVRR
Trigger: TCTCCTGACTGCCAGATGGCATGTCCCACTGTCCTC...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAAAGCAGCAGAGCAAATaGACAGTTCAGGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRKQQSK*TVQGGY
Trigger: GTAGCCTCCCTGAACTGTGCATTTGCTCTGCTGCTT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCCAGAGAGAAAGTCCTaGCTGCTGACACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTPERKS*LLTHSV
Trigger: GACCGAGTGTGTCAGCAGCCAGGACTTTCTCTCTGG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGACACTACAGTCAGTCTTaGGGGAGCTCTAGAGTTTCG +
Preference number: 4 (lower is better)
Translates to: TGYCLTELHKEPADPIIGHYSQS*GSSRVS
Trigger: CGAAACTCTAGAGCTCCCCCAAGACTGACTGTAGTG...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAATGTTGAGGATCAAGTaGCTTTCAAGCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRMLRIK*LSSSMV
Trigger: CACCATGCTGCTTGAAAGCCACTTGATCCTCAACAT...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACCTTGGCGTCTTGCACTaGCCTCTGAGGCTGACTAGC +
Preference number: 4 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYLGVLH*PLRLTS
Trigger: GCTAGTCAGCCTCAGAGGCCAGTGCAAGACGCCAAG...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAAACAAGGGGTTGCTCTaGAAGAACCTTTCTAGTCAC +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRNKGLL*KNLSSH
Trigger: GTGACTAGAAAGGTTCTTCCAGAGCAACCCCTTGTT...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGATCTCTCCCACTAAACTaGGTTCCCAGGCTTACAAGG +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRSLPLN*VPRLTR
Trigger: CCTTGTAAGCCTGGGAACCCAGTTTAGTGGGAGAGA...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAAGGGTTTCACCATGTTaGCCAGGGTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRRVSPC*PGWSQT
Trigger: AGTTTGAGACCACCCTGGCCAACATGGTGAAACCCT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTAAAATTAGCTGGGCGTaGTGGCAGGCGCCTACAATC +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGKISWA*WQAPTI
Trigger: GATTGTAGGCGCCTGCCACCACGCCCAGCTAATTTT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTTACACCGGAGGACAGTaGGACATGCCATCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTYTGGQ*DMPSGS
Trigger: ACTGCCAGATGGCATGTCCCACTGTCCTCCGGTGTA...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAGGTACCCACCGGACCTaGAACCAACCAGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKGTHRT*NQPAIL
Trigger: GAGAATTGCTGGTTGGTTCCAGGTCCGGTGGGTACC...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTCAAGGCGATGGACATaGTGCCTCAATCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVSRRWT*CLNLIP
Trigger: GGGAATCAGATTGAGGCACCATGTCCATCGCCTTGA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAACAGTCCAGCAGCCAGTaGCCCAGGACTTCATCTACA +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKQSSSQ*PRTSST
Trigger: TGTAGATGAAGTCCTGGGCCACTGGCTGCTGGACTG...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACGTCAGAAGTTTTTCCTaGGGGAAATCATTACGCTTC +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNVRSFS*GKSLRF
Trigger: GAAGCGTAATGATTTCCCTCAGGAAAAACTTCTGAC...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGGTCCCAGGTCCCATaGGAACTAACCCAACAATTT +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRSQVP*ELTQQF
Trigger: AAATTGTTGGGTTAGTTCTCATGGGACCTGGGACCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTAATCCCATTTTTGCCTaGGCTTCCAAAGTTCTGACA +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSNPIFA*ASKVLT
Trigger: TGTCAGAACTTTGGAAGCTCAGGCAAAAATGGGATT...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTTTGATAAAAACTATTTaGGGCCAGCACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSLIKTI*GQHSGS
Trigger: TGAGCCACTGTGCTGGCCTCAAATAGTTTTTATCAA...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAGGCTCAATGGCTCAATaGGTCATTCTGCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKGSMAQ*VILLLG
Trigger: CCCCAACAGCAGAATGACTCATTGAGCCATTGAGCC...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGAGTCAAAGTTCTAAATaGTCTGATCCCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGSQSSK*SDPSSV
Trigger: CACACTGGAGGGATCAGATCATTTAGAACTTTGACT...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTTTTTATGGAACAGTCTaGATCAGGGTCAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSFYGTV*IRVSNL
Trigger: CAAGTTGCTGACCCTGATTCAGACTGTTCCATAAAA...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGCCAACACATCCTTATTaGGTCGCTGATAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILPTHPY*VADSQS
Trigger: AGATTGGCTATCAGCGACGCAATAAGGATGTGTTGG...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGGCTTATACTAGCCATTaGACCACTAAGACCATGCAG +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILAYTSH*TTKTMQ
Trigger: CTGCATGGTCTTAGTGGTGCAATGGCTAGTATAAGC...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAAGAGAAGGGAAAAGTTaGGACTGGGTGACAAATTCA +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRREGKS*DWVTNS
Trigger: TGAATTTGTCACCCAGTCGCAACTTTTCCCTTCTCT...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGACTTCACAAGGAGCCTaGAGATCCCATTATAGGAAG +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILTSQGA*RSHYRK
Trigger: CTTCCTATAATGGGATCTGCAGGCTCCTTGTGAAGT...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAGCACTCTGCTGGTCCTaGCTCTTAAAGTGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLALCWS*LLKCKG
Trigger: TCCCTTGCACTTTAAGAGGCAGGACCAGCAGAGTGC...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACTTGGCCTCCCAAAGTaGCGGCATTATAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLLGLPK*RHYRCE
Trigger: CTCACACCTATAATGCCGGCACTTTGGGAGGCCAAG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCACACAGCCGGGCTGTaGTGTGAAACATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTHTAGL*CETSLS
Trigger: AGAAAGGGATGTTTCACAGCACAGCCCGGCTGTGTG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAAGGCATCATGGCTCATaGCAGTATTCCCAACACTTC +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRRHHGS*QYSQHF
Trigger: GAAGTGTTGGGAATACTGGCATGAGCCATGATGCCT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTGCGGTGGCTGCGTTTTaGAAGGGGACCCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSAVAAF*KGTQRE
Trigger: TTCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGC...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGTCTAGAGTTTCGTGGTaGAGGAACTTTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILSRVSW*RNFSTQ
Trigger: CTGTGTGGAAAAGTTCCTCCACCACGAAACTCTAGA...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGAGCTCTAGAGTTTCGTaGTGGAGGAACTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILSSRVS*WRNFST
Trigger: TGTGGAAAAGTTCCTCCACCACGAAACTCTAGAGCT...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACATGTGTAGGAGAGCCTaGGGTACTCGAACGCACGCT +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYMCRRA*GTRTHA
Trigger: AGCGTGCGTTCGAGTACCCCAGGCTCTCCTACACAT...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACACTAGCCCTCTGGGTTaGATGTTGGCCATCCCTCTC +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYTSPLG*MLAIPL
Trigger: GAGAGGGATGGCCAACATCCAACCCAGAGGGCTAGT...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTTACCATGCAGAGCTATaGCTTCCCGGAAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTYHAEL*LPGRVA
Trigger: TGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTA...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGATTACGCTTCTACTGCTaGGCTTCATGTTTATTCTGT +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRLRFYC*ASCLFC
Trigger: ACAGAATAAACATGAAGCTCAGCAGTAGAAGCGTAA...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACGGGCCATCGAAAACTTaGCTTGCTACGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYGPSKT*LATSQA
Trigger: AGCCTGTGACGTAGCAAGTCAAGTTTTCGATGGCCC...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGCTAAAACCAAGTGTCTaGCTTTTATGGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGLKPSV*LLWNSL
Trigger: CAGACTGTTCCATAAAAGTCAGACACTTGGTTTTAG...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAACACAAAGTTGTGTTCTaGGGTGCCAGGACATCCAAG +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKHKVVF*GARTSK
Trigger: CTTGGATGTCCTGGCACCTCAGAACACAACTTTGTG...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAGGTGCCACAGCTTCTaGTGCTTGTGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSRCHSF*CLCSGC
Trigger: GCAGCCCGAGCACAAGCAGCAGAAGCTGTGGCACCT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGTTAATACTTCAGCCATaGTCAGAACGCTGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILLILQP*SERCSL
Trigger: TAGACTGCAGCGTTCTGAGCATGGCTGAAGTATTAA...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTACCTGCTTAGCCATCTaGGTGATCCATCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGTCLAI*VIHLSI
Trigger: GATGGAAAGATGGATCACGCAGATGGCTAAGCAGGT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTCAACACTAAGGAGCTaGTGCTGTCTTGTAACTCAC +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVSTLRS*CCLVTH
Trigger: GTGAGTTACAAGACAGCAGCAGCTCCTTAGTGTTGA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCACTACAGTCAGTCTTaGGGGAGCTCTAGAGTTTCG +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTHYSQS*GSSRVS
Trigger: CGAAACTCTAGAGCTCCCCCAAGACTGACTGTAGTG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACATAAATTACAGTACCTaGCAGGCTGACATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNINYST*QADISS
Trigger: AGAACTGATGTCAGCCTGCCAGGTACTGTAATTTAT...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGAAATTGTTATCCAACGTaGAAAGAGGAGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRNCYPT*KEEQEP
Trigger: TGGTTCTTGCTCCTCTTTCCACGTTGGATAACAATT...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAATGACAGGTCTGGCCTaGGGAGATAGAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEMTGLA*GDRDPP
Trigger: AGGTGGATCTCTATCTCCCCAGGCCAGACCTGTCAT...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATCAGGCAGGCCAATGTaGCAGAAGAGAAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNESGRPM*QKRSQG
Trigger: ACCTTGGCTTCTCTTCTGCCACATTGGCCTGCCTGA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp TTCACAAAGGAGACTGGCTTGGAGAAGTCAAGCATGTaGCCCAAGGTTACCGAGGAAAATAGCCTATACACA +
Preference number: 4 (lower is better)
Translates to: FTKETGLEKSSM*PKVTEENSLYT
Trigger: TGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp CTTGTAAGTATATCACCTTTCACAAAGGAGACTGGCTaGGAGAAGTCAAGCATGTTGCCCAAGGTTACCGAG +
Preference number: 4 (lower is better)
Translates to: LVSISPFTKETG*EKSSMLPKVTE
Trigger: CTCGGTAACCTTGGGCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAAAGGTGATATACTTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATGCGTTTATGGGTTGGTaGGTCTGTAATGACATCGCC +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNAFMGW*VCNDIA
Trigger: GGCGATGTCATTACAGACTCACCAACCCATAAACGC...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACCATCTTTTCCAGAATaGGATTCCAAACTGAACTTT +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRPSFPE*DSKLNF
Trigger: AAAGTTCAGTTTGGAATCTCATTCTGGAAAAGATGG...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACACCCAGTCAATGAATaGACATTTATGGTTAACTCA +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRHPVNE*TFMVNS
Trigger: TGAGTTAACCATAAATGTTCATTCATTGACTGGGTG...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACAGGCTACTGTCTAACTaGACTTCACAAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYRLLSN*TSQGAC
Trigger: GCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCT...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATGGCATGAAAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNGMKIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTTTCATGCC...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAAATCTAACATACAGATaGCTAGGTCCCATAGGACAC +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRNLTYR*LGPIGH
Trigger: GTGTCCTATGGGACCTAGTCATCTGTATGTTAGATT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTAAAGCCACTGGGCCTTaGGATCCTTGGTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGKATGP*DPWSIF
Trigger: AAAAATAGACCAAGGATCTCAAGGCCCAGTGGCTTT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTGTGAAAGTGGGGCTTTaGATAAACATACCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVVKVGL*INIPSE
Trigger: TTCACTCGGTATGTTTATTCAAAGCCCCACTTTCAC...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACATGGTGCCTCAATCTaGTTCCCTGGGTTTAGATAC +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLHGASI*FPGFRY
Trigger: GTATCTAAACCCAGGGAATCAGATTGAGGCACCATG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGAAGATTTCAGTAATTTaGAGTAGATACCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGKISVI*SRYHSP
Trigger: TGGGGAGTGGTATCTACTTCAAATTACTGAAATCTT...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp AGAACGCTGCAGTCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGATTTAGATCATTCTGTTaGGTTTATGGGTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RTLQSKDELQLAHAKLGRFRSFC*VYGLVS
Trigger: ACTCACCAACCCATAAACGCAACAGAATGATCTAAA...TCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGACTGCAGCGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTCAGAGGGGGCTGGCTTaGCCTTTTTACTATTATGTA +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGQRGLA*PFYYYV
Trigger: TACATAATAGTAAAAAGGGCAAGCCAGCCCCCTCTG...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTACACTAAGGAGCTGCTaGTGTCTTGTAACTCACAAA +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVTLRSC*CLVTHK
Trigger: TTTGTGAGTTACAAGACAGCAGCAGCTCCTTAGTGT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGGTTACTTCAAGAAGATaGAGACTGCAACATTCAACA +
Preference number: 4 (lower is better)
Translates to: SEINACGTIWRCTPEDSGVTSRR*RLQHST
Trigger: TGTTGAATGTTGCAGTCTGCATCTTCTTGAAGTAAC...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAACCTGGCTTTGAGGCATaGTACATGGCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEPGFEA*YMALFT
Trigger: AGTGAAAAGGGCCATGTAGCATGCCTCAAAGCCAGG...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTAGGGAGGCTAGAAGCTaGCCTTATGGGGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSREARS*PYGVRS
Trigger: TGACCTTACCCCATAAGGCCAGCTTCTAGCCTCCCT...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAACACAGTTATTTGGTTaGGCTGTATTTGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRTQLFG*AVFDGG
Trigger: ACCCCCATCAAATACAGCCCAACCAAATAACTGTGT...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGGAAGAAAATCTTACTaGTTTAGGCTGCCTAAAATG +
Preference number: 4 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSGRKSY*FRLPKM
Trigger: CATTTTAGGCAGCCTAAACCAGTAAGATTTTCTTCC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp CAGGCTTACAAGGGCAATGACTGGGGATCTCATTCATaGTCATACTCTGTCTACACGAAATATTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QAYKGNDWGSHS*SYSVYTKYSAG
Trigger: ACCTGCTGAATATTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATACTTGTCTTAAACAGTaGACAAGGGAAGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDTCLKQ*TREDGL
Trigger: GAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGT...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGACATTCTCAAAGTTCATaGCCTCTCTACTTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGYCLTELHKEPADPIIGHSQSS*PLYFRS
Trigger: TGACCTAAAGTAGAGAGGTCATGAACTTTGAGAATG...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAAATAAACATACCGAGTaGAGTCTGACTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLNKHTE*SLTWHR
Trigger: CCGATGCCAAGTCAGACTTCACTCGGTATGTTTATT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTACTTCAACTTGCCCATaGCAAGTTAGGGCGACAGGA +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSTSTCP*QVRATG
Trigger: TCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGT...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACTTAGATTCAGCCAAATaGTTTCCAACAATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNLDSAK*FPTILL
Trigger: GAGCAAAATTGTTGGAAAGCATTTGGCTGAATCTAA...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGAGATCAATCCCATTTTTaGCTGAGCTTCCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRDQSHF*LSFQSS
Trigger: AGAACTTTGGAAGCTCAGGCAAAAATGGGATTGATC...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAAGAAGTCAAGCATGTTaGCCAAGGTTACCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLRSQAC*PRLPRK
Trigger: TTTCCTCGGTAACCTTGGGCAACATGCTTGACTTCT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAGCACAGCACTCCTTTTaGACAAAGTTGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLAQHSF*TKLCSE
Trigger: CTCAGAACACAACTTTGTGCAAAAGGAGTGCTGTGC...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAACAGAGAAAGAACAAATaGCAGCCCAGTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKQRKNK*QPSHLT
Trigger: AGTGAGATGACTGGGCTGGCATTTGTTCTTTCTCTG...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTTCTAGAGTTTCGTGGTaGAGGAACTTTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTSRVSW*RNFSTQ
Trigger: CTGTGTGGAAAAGTTCCTCCACCACGAAACTCTAGA...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAAGCTCTAGAGTTTCGTaGTGGAGGAACTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLSSRVS*WRNFST
Trigger: TGTGGAAAAGTTCCTCCACCACGAAACTCTAGAGCT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTATGGTCTCATGAAAGATaGACTGGCAACAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLWSHER*TGNNSS
Trigger: TGAGCTGTTGTTGCCAGTCCATCTTTCATGAGACCA...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTATCCCGATTAGCTTATaGGGAAAACCTCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGIPISL*GKPQKE
Trigger: CTCTTTCTGAGGTTTTCCCCATAAGCTAATCGGGAT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAACAAAGGAGACTGGCTTaGAGAAGTCAAGCATGTTGC +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEQRRLA*RSQACC
Trigger: GCAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTG...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTTTCCCATCCTCACCATaGCTAAATACCTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSFPSSP*LNTSVT
Trigger: GGTGACTGAGGTATTTAGTCATGGTGAGGATGGGAA...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAACAACAGACTTATCACTaGCTACATTTCCCGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEQQTYH*LHFPGF
Trigger: GAAACCCGGGAAATGTAGTCAGTGATAAGTCTGTTG...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTTACTTTGTTTTAGATaGCCTGTACTATGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVLLCFR*PVLWPK
Trigger: TTTGGGCCATAGTACAGGTCATCTAAAACAAAGTAA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGACATGAATTAGAGGTATaGACCCTAAGAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: VILLLGQKNESNLKLHLRHELEV*TLRVRM
Trigger: CATTCTTACTCTTAGGGTTCATACCTCTAATTCATG...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTGAAGAGGTAGAAGAGTaGCACCAAAGGGGCGAGACA +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSEEVEE*HQRGET
Trigger: TGTCTCGCCCCTTTGGTGTCACTCTTCTACCTCTTC...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTGCTTCCCGGAAGGGTTaGAAATCAGTCTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSASRKG*KSVSTD
Trigger: ATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGC...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACATATATAGAAACCAGGTaGATGGTACAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPHRYAIFHDLFCISASTYIETR*MVQCSC
Trigger: GCAGCTGCACTGTACCATGCACCTGGTTTCTATATA...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTCCATGCTCAGAACGCTaGAGTCTAAGGATGAACTTC +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSPCSER*SLRMNF
Trigger: GAAGTTCATCCTTAGACTGCAGCGTTCTGAGCATGG...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCCATGTCCTTGTGCTTaGCAAACGCATGAATTTAGA +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTPCPCA*QTHEFR
Trigger: TCTAAATTCATGCGTTTGGCAAGCACAAGGACATGG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAACTCAATGAGTCATTCTaGTGTTGGGGCAGAAGAATG +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNELNESF*CWGRRM
Trigger: CATTCTTCTGCCCCAACAGCAGAATGACTCATTGAG...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTCTCCAGTGTGATAGCTaGAATTTAAAATGTGACCCT +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGLQCDS*NLKCDP
Trigger: AGGGTCACATTTTAAATTGCAGCTATCACACTGGAG...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGGACATCCAAGCACTTaGAGTGTCAATGTCGTGTTT +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEGHPST*SVNVVF
Trigger: AAACACGACATTGACACTGCAAGTGCTTGGATGTCC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTATTGCACTATTCAGATaGACAGCACTCCTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTIALFR*TALLLH
Trigger: GTGCAAAAGGAGTGCTGTGCATCTGAATAGTGCAAT...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACCCACCATTGTCCAAGTaGAGTGCCATTTCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYPPLSK*SAISSD
Trigger: ATCAGAAGAAATGGCACTCCACTTGGACAATGGTGG...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACGTGAACAAGGGAAGATaGCCTCATGTTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYVNKGR*PHVSFA
Trigger: TGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCAC...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACGGAAAGTACCCCGCATaGGAAGTAGTGTTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYGKYPA*EVVFVL
Trigger: TAAGACAAACACTACTTCCCATGCGGGGTACTTTCC...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATTTCAAAATCATCTCTTaGCGTCTTGCACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNFKIIS*RLALAS
Trigger: AGAGGCCAGTGCAAGACGCCAAGAGATGATTTTGAA...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTTTTCAACAAGACTCATaGCCAGGCGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSFQQDS*PGAVAH
Trigger: GTGAGCCACTGCGCCTGGCCATGAGTCTTGTTGAAA...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAATTTCACAAAGGAGACTaGCTTGGAGAAGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKFHKGD*LGEVKH
Trigger: ATGCTTGACTTCTCCAAGCCAGTCTCCTTTGTGAAA...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAGTTCTTTTCAGGGGCTaGTTTGAACAAAGGGACATA +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKVLFRG*FEQRDI
Trigger: TATGTCCCTTTGTTCAAACCAGCCCCTGAAAAGAAC...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp AGCCTTGGAACGGATATATGTTTGCCTATGATGATCTaGCTAACGACTACACAATATCTGATGTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLGTDICLPMMI*LTTTQYLMSSA
Trigger: AGCAGAGGACATCAGATATTGTGTAGTCGTTAGCAAGATCATCATAGGCAAACATATATCCGTTCCAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CAA 72 bp CGCTCTTACTTTCTGATGGAAGTATTAACTGGTACCTaGCAGAAGGTACTTTGGCAAGACCCATCAGTATTT +
Preference number: 4 (lower is better)
Translates to: RSYFLMEVLTGT*QKVLWQDPSVF
Trigger: AAATACTGATGGGTCTTGCCAAAGTACCTTCTGCAAGGTACCAGTTAATACTTCCATCAGAAAGTAAGAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTTCCAGAATGTATCTCTaGAGATTCCCATCCTCACCA +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSSRMYL*RFPSSP
Trigger: TGGTGAGGATGGGAATCTTCAGAGATACATTCTGGA...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCTAAGGCAGATCACTTaGGGTCAGGTGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSLRQIT*GQVFKT
Trigger: GGTCTTGAACACCTGACCTCAAGTGATCTGCCTTAG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAACTAGTCTGTCAACATaGGACAAGCTCAAGATCTTA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLTSLST*DKLKIL
Trigger: TAAGATCTTGAGCTTGTCTCATGTTGACAGACTAGT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCATTGGTGCCTATTATaGCACCAGACCCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSHWCLL*HQTLHA
Trigger: AGCATGCAGGGTCTGGTGTCATAATAGGCACCAATG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTTTCTTGCATTGGAAATaGATTGCACTATTCAGATGC +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGFLHWK*IALFRC
Trigger: GCATCTGAATAGTGCAATTCATTTCCAATGCAAGAA...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACATGGTACAGTGCAGCTaGAAAAATGGAAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYMVQCS*KNGSQI
Trigger: GATTTGGCTTCCATTTTTGCAGCTGCACTGTACCAT...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAGCTAGAGAATCTCCATaGGATTCCATCTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: IPHRYAIFHDLFCISASTARESP*DSIFSR
Trigger: TCTGGAAAAGATGGAATCGCATGGAGATTCTCTAGC...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACTTCCATGATTTGTTTTaGATCTCAGCTAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYFHDLF*ISASTG
Trigger: CCCTGTGCTAGCTGAGATGCAAAACAAATCATGGAA...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAATCGAAAACTTGACTTaGTACGTCACAGGCTACTGT +
Preference number: 4 (lower is better)
Translates to: IPHRYAIFHDLFCISASTIENLT*YVTGYC
Trigger: ACAGTAGCCTGTGACGTAGCAAGTCAAGTTTTCGAT...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGTGTCAGGAACAGTGTaGAGTCTTAAAGTACTGCAT +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEVSGTV*SLKVLH
Trigger: ATGCAGTACTTTAAGACTGCACACTGTTCCTGACAC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTTATGACACCAGACCCTaGATGCTAGAGGCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSYDTRP*MLEAFE
Trigger: CTCAAAGGCCTCTAGCATGCAGGGTCTGGTGTCATA...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAAGAGACTGCTTTGGTaGATTAATCTCTTACATCTT +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVKRLLW*INLLHL
Trigger: AAGATGTAAGAGATTAATGCACCAAAGCAGTCTCTT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTGATCCAGAAGATTTCTaGTCTCAAGTATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGDPEDF*SQVCCL
Trigger: TAAACAGCATACTTGAGACCAGAAATCTTCTGGATC...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTGAAAGATCACTCCAATaGTCTCATGAAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTERSLQ*SHERWT
Trigger: AGTCCATCTTTCATGAGACCATTGGAGTGATCTTTC...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAAACCAGGGATACAGTTaGTCATTCACCTTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKNQGYS*SFTFKS
Trigger: AGACTTAAAGGTGAATGACCAACTGTATCCCTGGTT...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTCATCAAAATCAGTTTaGGAACTAAAACCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVSSKSV*ELKPSV
Trigger: GACACTTGGTTTTAGTTCCCAAACTGATTTTGATGA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCAGTTTGTAATGTCATaGGAAAATTGCTCACGACGT +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTQFVMS*ENCSRR
Trigger: ACGTCGTGAGCAATTTTCCCATGACATTACAAACTG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTGGAACAGATTCAATATaGGAAAATGTAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTGTDSI*ENVVGV
Trigger: AACTCCCACTACATTTTCTCATATTGAATCTGTTCC...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTTTCTCCTTAATACACTaGTGTTCTCACAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTFSLIH*CSHKPV
Trigger: TACTGGTTTGTGAGAACATCAGTGTATTAAGGAGAA...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGGAAACTTTAAACCATaGAGTGACAAGACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PFYITLACIGPKNVLTNEGNFKP*SDKTRK
Trigger: CTTTCTGGTCTTGTCACTTCATGGTTTAAAGTTTCC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAGATTATACCTCAGAATaGAGGCAGACTAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLDYTSE*RQTRFQ
Trigger: TTGAAATCTAGTCTGCCTTCATTCTGAGGTATAATC...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACCTTTGAGTCTGAAATaGTGTGTAACTTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLPLSLK*CVTLQR
Trigger: TCTCTGTAAAGTTACACATCATTTCAGACTCAAAGG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTGGCCAAAGAATGTTTTaGCAAACGAAAGGTACAAAA +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTGQRMF*QTKGTK
Trigger: TTTTGTACCTTTCGTTTGTCAAAACATTCTTTGGCC...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTGCTTCCCGGAAGGGTTaGAAATCAGTCTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSASRKG*KSVSTD
Trigger: ATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGC...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTTTCTGGTCTCAAGTATaGTGTTTACATAAAAACGAG +
Preference number: 4 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGFWSQV*CLHKNE
Trigger: CTCGTTTTTATGTAAACAGCATACTTGAGACCAGAA...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAACTATGTCAGGTTCTTTaGTATGTTCTGTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKLCQVL*YVLLKP
Trigger: TGGCTTTAACAGAACATAGCAAAGAACCTGACATAG...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAATTCTGTTGCGTTTATaGGTTGGTGAGTCTGTAATG +
Preference number: 4 (lower is better)
Translates to: IPHRYAIFHDLFCISASTILLRL*VGESVM
Trigger: CATTACAGACTCACCAACCCATAAACGCAACAGAAT...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATCCTACAGGGTTACTCTaGGGACAGTTTAATAATAAT +
Preference number: 4 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDPTGLL*GQFNNN
Trigger: ATTATTATTAAACTGTCCCCAGAGTAACCCTGTAGG...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATGCTGTGAGTAATTACTaGAAAAACCCTTACACTGAT +
Preference number: 4 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDAVSNY*KNPYTD
Trigger: ATCAGTGTAAGGGTTTTTCCAGTAATTACTCACAGC...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AAAGTTCATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACAAGAATCAGAGAATCTaGCTTAAGACGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KVHDLSTLGHLECSLHVYKNQRI*LKTKRA
Trigger: AGCTCTCTTCGTCTTAAGCCAGATTCTCTGATTCTT...GTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAAAATGTAGTGGGAGTTaGAGAATACAGTTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLKCSGS*RIQFFE
Trigger: CTCGAAAAACTGTATTCTCCAACTCCCACTACATTT...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTAGGATACCTAACCAATaGTTAAGACTGGATCATAAG +
Preference number: 4 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTRIPNQ*LRLDHK
Trigger: CTTATGATCCAGTCTTAACCATTGGTTAGGTATCCT...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
3UTR CAA 72 bp CCTCTCACTATAAAGGAAGTTAGCCAGTTTTCACTGTaGAATGGAAATCTTCAGGCCCAAAGCCACAATTAT +
Preference number: 4 (lower is better)
Translates to: PLTIKEVSQFSL*NGNLQAQSHNY
Trigger: ATAATTGTGGCTTTGGGCCTGAAGATTTCCATTCAACAGTGAAAACTGGCTAACTTCCTTTATAGTGAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATGAGTGCCATTTCTTCTaGTATGAAAGTGTTCAAATC +
Preference number: 4 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNECHFF*YESVQI
Trigger: GATTTGAACACTTTCATATCAGAAGAAATGGCACTC...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTGTATGCAATCTTCCATaGTTTGTTTTGCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSVCNLP*FVLHLS
Trigger: GCTGAGATGCAAAACAAATCATGGAAGATTGCATAC...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTAGAACTAAGGAGCTATaGCGTCTAAAAGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSRTKEL*RLKESE
Trigger: CTCTGATTCTTTTAGACGTCATAGCTCCTTAGTTCT...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTACTCCAATGGTCTCATaGAAGATGGACTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSTPMVS*KMDWQQ
Trigger: TTGTTGCCAGTCCATCTTTCATGAGACCATTGGAGT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCCAACACATCCTTATTaGGTCGCTGATAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSPTHPY*VADSQS
Trigger: AGATTGGCTATCAGCGACGCAATAAGGATGTGTTGG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACTTAGGTCACCTCGAATaGAGTCTACATGTTTACATT +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYLGHLE*SLHVYI
Trigger: AATGTAAACATGTAGACTGCATTCGAGGTGACCTAA...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp ATACCACACAGGTATGCAATCTTCCATGATTTGTTTTGCATCTCAGCTAGCACAGGGAGAGTTGGGTTTTaGTATTTTAAGTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: IPHRYAIFHDLFCISASTGRVGF*YFKLQS
Trigger: TGATTGCAACTTAAAATAGCAAAACCCAACTCTCCC...TGTGCTAGCTGAGATGCAAAACAAATCATGGAAGATTGCATACCTGTGTGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTTTCAAATCGACATCATaGAGTCCATTTCTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: VFPEGNHYASTAELHVYSFKSTS*SPFLLR
Trigger: TCGAAGGAGAAATGGACTCCATGATGTCGATTTGAA...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTACCTTAAGAGAAGCATaGAATGACCCACAACCCTCT +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSTLREA*NDPQPS
Trigger: AGAGGGTTGTGGGTCATTCCATGCTTCTCTTAAGGT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAAGAGAAGCATGGAATaGCCCACAACCCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSKRSME*PTTLLI
Trigger: TATTAAGAGGGTTGTGGGTCATTCCATGCTTCTCTT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR TCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTGGTTTCATCATACTTTaGAAAGGAAACTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSGFIIL*KGNSHW
Trigger: CCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAACC...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR GCA 90 bp CATGACCTCTCTACTTTAGGTCACCTCGAATGCAGTCTACATGTTTACATTTACACCCTTACACTGATTTaGAATGGTCTTTTAAGGATA +
Preference number: 4 (lower is better)
Translates to: HDLSTLGHLECSLHVYIYTLTLI*NGLLRI
Trigger: TATCCTTAAAAGACCATTGCAAATCAGTGTAAGGGT...GTAAATGTAAACATGTAGACTGCATTCGAGGTGACCTAAAGTAGAGAGGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR GCA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTCTAATTACTTCTACCTaGTTAGCCATCTGCGTGATC +
Preference number: 4 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSLITST*LAICVI
Trigger: GATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAG...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTGTGCAGCTGCAAAAATaGAAGCCAAATCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSVQLQK*KPNHVF
Trigger: AAAAACATGATTTGGCTTCCATTTTTGCAGCTGCAC...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CCA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTTATCACTACTCCAGTTaGGTAAACCACATTGAAGAA +
Preference number: 4 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSYHYSS*VNHIEE
Trigger: TTCTTCAATGTGGTTTACCCAACTGGAGTAGTGATA...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
3UTR CAA 72 bp GTTAAGGTCACTTTTAGCCTTGGAACGGATATATGTTaGCCTATGATGATCTTGCTAACGACTACACAATAT +
Preference number: 4 (lower is better)
Translates to: VKVTFSLGTDIC*PMMILLTTTQY
Trigger: ATATTGTGTAGTCGTTAGCAAGATCATCATAGGCAAACATATATCCGTTCCAAGGCTAAAAGTGACCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS CCA 90 bp GGCCCCCGCGGGAGCGTCGTCGTCAAGCGGCCCGGCGGCAGGGCCTaGCGACCGACGGCGCCTTCTCCTTTCAGCGGCCCAGGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GPRGSVVVKRPGGRA*RPTAPSPFSGPGLL
Trigger: CAGGAGGCCTGGGCCGCTGAAAGGAGAAGGCGCCGTCGGTCGCCAGGCCCTGCCGCCGGGCCGCTTGACGACGACGCTCCCGCGGGGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACGGCTTCCCGGAAGGGTaGCAAATCAGTCTCTACAGA +
Preference number: 5 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHGFPEG*QISLYR
Trigger: TCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCC...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGGCGGTGGCTGCGTTTaGGAAGGGGACCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSGGGCV*EGDPER
Trigger: TCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GAGGTAGAGGTCGCGGTGAGCCAATATCGCGCCAATGCACTCCAGCCTGGGCCAGGAAAGAACTACGGTTaGCCAGAGAGAACAAGATCT +
Preference number: 5 (lower is better)
Translates to: EVEVAVSQYRANALQPGPGKNYG*PERTRS
Trigger: AGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCC...TGGCCCAGGCTGGAGTGCATTGGCGCGATATTGGCTCACCGCGACCTCTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp ACAGGCTACTGTCTAACTGAACTTCACAAGGAGCCTGCAGATCCCATTATAGGACACTGCCGCTCCCACTaGGAGAACCAGTGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: TGYCLTELHKEPADPIIGHCRSH*ENQCSG
Trigger: GCCCGAGCACTGGTTCTCCAAGTGGGAGCGGCAGTG...TCCTATAATGGGATCTGCAGGCTCCTTGTGAAGTTCAGTTAGACAGTAGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGGGCGGTGGCTGCGTTTaGGAAGGGGACCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILGGGCV*EGDPER
Trigger: TCTCTCTGGGTCCCCTTCCAAAACGCAGCCACCGCC...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTCTGAGTAACCTGGCTTaGAGGCATGCTACATGGCCC +
Preference number: 5 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSLSNLA*RHATWP
Trigger: GGGCCATGTAGCATGCCTCAAAGCCAGGTTACTCAG...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS CCA 90 bp CCTTCGACTAGCATTCGATCCACTGCTTACATGTGTAGGAGAGCCTaGGGTACTCGAACGCACGCTTATACTAGCCATTGCACCACTAAG +
Preference number: 5 (lower is better)
Translates to: PSTSIRSTAYMCRRA*GTRTHAYTSHCTTK
Trigger: CTTAGTGGTGCAATGGCTAGTATAAGCGTGCGTTCGAGTACCCCAGGCTCTCCTACACATGTAAGCAGTGGATCGAATGCTAGTCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTGGCTTCCCGGAAGGGTaGCAAATCAGTCTCTACAGA +
Preference number: 5 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSGFPEG*QISLYR
Trigger: TCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCC...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGGGGGCCATCGAAAACTaGACTTGCTACGTCACAGGC +
Preference number: 5 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILGAIEN*TCYVTG
Trigger: GCCTGTGACGTAGCAAGTCAAGTTTTCGATGGCCCC...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTACGAGTGAAGTCTGACTaGGCATCGGGCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLRVKSD*ASGSPP
Trigger: GGGTGGGGAGCCCGATGCCAAGTCAGACTTCACTCG...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTGGTGAGAAGACACCGTaGATCCACCAGCGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGGEKTP*IHQRRC
Trigger: GCACCTGCGCTGGTGGATCAACGGTGTCTTCTCACC...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS CCA 90 bp CTGTTGCGTTTATGGGTTGGTGAGTCTGTAATGACATCGCCACACTaGGCTGAGGTACGCTTTCTAGTTCCACCATTGTCCAAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLRLWVGESVMTSPH*AEVRFLVPPLSKWS
Trigger: ACTCCACTTGGACAATGGTGGAACTAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCATTACAGACTCACCAACCCATAAACGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp CCTGGGTGCTCGGGCCTGCTCGTCTCTCAAATGCTGCCCCCACTAAAACATCACTACTGGACTACAAGTTaGCAAGGAAACATTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PGCSGLLVSQMLPPLKHHYWTTS*QGNIFH
Trigger: GTGAAAAATGTTTCCTTGCAAACTTGTAGTCCAGTA...GTGATGTTTTAGTGGGGGCAGCATTTGAGAGACGAGCAGGCCCGAGCACCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAGGGAGGCTACAGAGATaGGGAGCCCTGAAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLGRLQR*GALKQG
Trigger: GCCTTGCTTCAGGGCTCCCAATCTCTGTAGCCTCCC...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TCTGAGATAAATGCCTGTGGGACAATTTGGAGATGTACACCGGAGGACAGTGGGAGAGATAGCACTGGGTaGGACAGGGCAACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SEINACGTIWRCTPEDSGRDSTG*DRATLN
Trigger: ATTCAGAGTTGCCCTGTCCAACCCAGTGCTATCTCT...CCCACTGTCCTCCGGTGTACATCTCCAAATTGTCCCACAGGCATTTATCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTACAAAGGAGACTGGCTaGGAGAAGTCAAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSTKETG*EKSSML
Trigger: CAACATGCTTGACTTCTCCAAGCCAGTCTCCTTTGT...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS GCA 90 bp ATTGCACCACTAAGACCATGCAGAGCTATGGCTTCCCGGAAGGGTTaGAAATCAGTCTCTACAGATGAGCTAGTTTCCGTTGAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: IAPLRPCRAMASRKG*KSVSTDELVSVEVA
Trigger: AGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTCTTAGTGGTGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACTTTCTAGTTCCACCATaGTCCAAGTGGAGTGCCATT +
Preference number: 5 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNFLVPP*SKWSAI
Trigger: AATGGCACTCCACTTGGACAATGGTGGAACTAGAAA...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGCAGAGAAGGGAAAAGTaGCGACTGGGTGACAAATTC +
Preference number: 5 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILQRREK*RLGDKF
Trigger: GAATTTGTCACCCAGTCGCAACTTTTCCCTTCTCTG...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAAGGCAGGAGAATCGCTaGAACCCAGAGGTAGAGGTC +
Preference number: 5 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKRQENR*NPEVEV
Trigger: GACCTCTACCTCTGGGTTCAAGCGATTCTCCTGCCT...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp AACATTGGGGTTTCAGGAAAGAACTACGGTTTGCCAGAGAGAACAAGATCTCTAGAGGGTTTCACCATGTaGGCCAGGGTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: NIGVSGKNYGLPERTRSLEGFTM*ARVVSN
Trigger: GTTTGAGACCACCCTGGCCAACATGGTGAAACCCTC...TAGAGATCTTGTTCTCTCTGGCAAACCGTAGTTCTTTCCTGAAACCCCAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTGGGCCCTCTGCAGATTaGTTCCACCAGTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTGPSAD*FHQCIS
Trigger: GGAGATACACTGGTGGAACAAATCTGCAGAGGGCCC...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TCTAAGGATGAACTTCAACTTGCCCATGCCAAGTTAGGGCGACAGGAGCAGAACGCAATCTTCCATGATTaGTTTTGCATCTCAGCTAGC +
Preference number: 5 (lower is better)
Translates to: SKDELQLAHAKLGRQEQNAIFHD*FCISAS
Trigger: GCTAGCTGAGATGCAAAACAAATCATGGAAGATTGC...GTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCAAGTTGAAGTTCATCCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCTGGGTCCCCACTGTGTTGTATTCACTTAGCAGACCTCTGTGATAACCCCAGTTTTGATAAAAACTATTaGAGGCCAGCACAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SGSPLCCIHLADLCDNPSFDKNY*RPAQWL
Trigger: GAGCCACTGTGCTGGCCTCAAATAGTTTTTATCAAA...ACTGGGGTTATCACAGAGGTCTGCTAAGTGAATACAACACAGTGGGGACCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GTCATTCTGCTGTTGGGGCAGAAGAATGAGTCCAACCTGAAACTTCATCTGAGATTAAGGGTATGCATTTaGAGGCCAGGCATCATGGCT +
Preference number: 5 (lower is better)
Translates to: VILLLGQKNESNLKLHLRLRVCI*RPGIMA
Trigger: AGCCATGATGCCTGGCCTCAAAATGCATACCCTTAA...TCTCAGATGAAGTTTCAGGTTGGACTCATTCTTCTGCCCCAACAGCAGAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATTGGTTGGGCTGTATTaGATGGGGGTAGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PFYITLACIGPKNVLTNELVGLY*MGVGVR
Trigger: CCTTACCCCTACCCCCATCAAATACAGCCCAACCAA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTAGATCAATCCCATTTTaGCCTGAGCTTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVRSIPF*PELPKF
Trigger: GAACTTTGGAAGCTCAGGCAAAAATGGGATTGATCT...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAAGCAGAGGGGGCTGGCTaGCCCTTTTTACTATTATGT +
Preference number: 5 (lower is better)
Translates to: PFYITLACIGPKNVLTNEAEGAG*PFLLLC
Trigger: ACATAATAGTAAAAAGGGCAAGCCAGCCCCCTCTGC...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAACGAGAGGTCCAGATTaGGAAGTGAAGACATGGGAA +
Preference number: 5 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKTRGPD*EVKTWE
Trigger: TTCCCATGTCTTCACTTCCAAATCTGGACCTCTCGT...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp CCTTTCTATATCACTCTGGCATGCATAGGGCCAAAGAATGTTTTGACAAACGAATGGGTCCCCACTGTGTaGTATTCACTTAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: PFYITLACIGPKNVLTNEWVPTV*YSLSRP
Trigger: AGGTCTGCTAAGTGAATACAACACAGTGGGGACCCA...TTCGTTTGTCAAAACATTCTTTGGCCCTATGCATGCCAGAGTGATATAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GCTGACGTAGTCACCACTAGAGGTAGTAGCCAGGCCAAAAACTCAATCATTCTGTTGCCTATGATGATCTaGCTAACGACTACACAATAT +
Preference number: 5 (lower is better)
Translates to: ADVVTTRGSSQAKNSIILLPMMI*LTTTQY
Trigger: ATATTGTGTAGTCGTTAGCAAGATCATCATAGGCAA...CAGAATGATTGAGTTTTTGGCCTGGCTACTACCTCTAGTGGTGACTACGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATCATCGAAAACTTGACTaGCTACGTCACAGGCTACTG +
Preference number: 5 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNHRKLD*LRHRLL
Trigger: CAGTAGCCTGTGACGTAGCAAGTCAAGTTTTCGATG...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp GAGTCTGAAATGATGTGTAACTTTACAGAGAGACAACTCAGGCCCAGTGGGGTTTGGTTTCATCATACTTaGAAAAGGAAACTCCCACTG +
Preference number: 5 (lower is better)
Translates to: ESEMMCNFTERQLRPSGVWFHHT*KRKLPL
Trigger: CAGTGGGAGTTTCCTTTTCAAAGTATGATGAAACCA...AACCCCACTGGGCCTGAGTTGTCTCTCTGTAAAGTTACACATCATTTCAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS TCA 90 bp ACGCTTTCTAGTTCCACCATTGTCCAAGTGGAGTGCCATTTCTTCTaGTATGAAAGTGTTCAAATCGACATCATGGAGTCCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TLSSSTIVQVECHFF*YESVQIDIMESISP
Trigger: AGGAGAAATGGACTCCATGATGTCGATTTGAACACTTTCATATCAGAAGAAATGGCACTCCACTTGGACAATGGTGGAACTAGAAAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TCACTTGTCTTAAACAGTGAACAAGGGAAGATGGCCTCATGTTTCCTTTGCAATGAGGGACAGGGAGAGTaGGGTTTTGCTATTTTAAGT +
Preference number: 5 (lower is better)
Translates to: SLVLNSEQGKMASCFLCNEGQGE*GFAILS
Trigger: ACTTAAAATAGCAAAACCCAACTCTCCCTGTCCCTC...ATTGCAAAGGAAACATGAGGCCATCTTCCCTTGTTCACTGTTTAAGACAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTAGCACAGGGAAACCCTaGAAAAACCTAGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSSTGKP*KNLAVR
Trigger: TCTGACAGCTAGGTTTTTCAAGGGTTTCCCTGTGCT...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTTTTCAAAATCATCTCTaGGCGTCTTGCACTGGCCTC +
Preference number: 5 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSFQNHL*ASCTGL
Trigger: GAGGCCAGTGCAAGACGCCAAGAGATGATTTTGAAA...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATACTTTAAACAAGGGGTaGCTCTGGAAGAACCTTTCT +
Preference number: 5 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDTLNKG*LWKNLS
Trigger: AGAAAGGTTCTTCCAGAGCAACCCCTTGTTTAAAGT...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp GCATGTTGCCCAAGGTTACCGAGGAAAATAGCCTATACACAAAGACTATGTACTCCTATGTCAGGTTCTTaGCTATGTTCTGTTAAAGCC +
Preference number: 5 (lower is better)
Translates to: ACCPRLPRKIAYTQRLCTPMSGS*LCSVKA
Trigger: GGCTTTAACAGAACATAGCAAAGAACCTGACATAGG...AGTACATAGTCTTTGTGTATAGGCTATTTTCCTCGGTAACCTTGGGCAACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp CACTACTCCAGTTGGGTAAACCACATTGAAGAATCTGACTGCAGGTCTTTAGATAACCTGGCAATACTGTaGAAGCAAAATACTCAACAC +
Preference number: 5 (lower is better)
Translates to: HYSSWVNHIEESDCRSLDNLAIL*KQNTQH
Trigger: GTGTTGAGTATTTTGCTTCAACAGTATTGCCAGGTT...ATCTAAAGACCTGCAGTCAGATTCTTCAATGTGGTTTACCCAACTGGAGTAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp CCTAATTACTTCTACCTGCTTAGCCATCTGCGTGATCCATCTTTCCATCATGGTACGAGTTACCAGTTGTaGGTATTAATTCAACTCTTG +
Preference number: 5 (lower is better)
Translates to: PNYFYLLSHLRDPSFHHGTSYQL*VLIQLL
Trigger: CAAGAGTTGAATTAATACCAACAACTGGTAACTCGT...ACCATGATGGAAAGATGGATCACGCAGATGGCTAAGCAGGTAGAAGTAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAATGCATTGGAAATGAATaGCACTATTCAGATGCACAG +
Preference number: 5 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKCIGNE*HYSDAQ
Trigger: CTGTGCATCTGAATAGTGCAATTCATTTCCAATGCA...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp AATGGAAATCTTCAGGCCCAAAGCCACAATTATTCGAGTTTAATGAGTTCCAGTAGGTCACTTTTAGCCTaGGAACGGATATATGTTTGC +
Preference number: 5 (lower is better)
Translates to: NGNLQAQSHNYSSLMSSSRSLLA*ERIYVC
Trigger: GCAAACATATATCCGTTCCAAGGCTAAAAGTGACCT...ACTGGAACTCATTAAACTCGAATAATTGTGGCTTTGGGCCTGAAGATTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAACCTTCAACTGTATCATaGCTTAAAACTCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKPSTVS*LKTPKV
Trigger: AACTTTGGGAGTTTTAAGCAATGATACAGTTGAAGG...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTATCAGGGTCAGCAACTaGCAGAGACCACCTATGATA +
Preference number: 5 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSIRVSN*QRPPMI
Trigger: TATCATAGGTGGTCTCTGCAAGTTGCTGACCCTGAT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TACAAGGGCAATGACTGGGGATCTCATTCATTGTCATACTCTGTCTACACGAAAGTCATCAAAATCAGTTaGGGAACTAAAACCAAGTGT +
Preference number: 5 (lower is better)
Translates to: YKGNDWGSHSLSYSVYTKVIKIS*GTKTKC
Trigger: ACACTTGGTTTTAGTTCCCAAACTGATTTTGATGAC...TTTCGTGTAGACAGAGTATGACAATGAATGAGATCCCCAGTCATTGCCCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAGGACATCCAAGCACTaGCAGTGTCAATGTCGTGTT +
Preference number: 5 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSRTSKH*QCQCRV
Trigger: AACACGACATTGACACTGCAAGTGCTTGGATGTCCT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp GTTTTTCCTGAGGGAAATCATTACGCTTCTACTGCTGAGCTTCATGTTTATTCTGGAACGGATATATGTTaGCCTATGATGATCTTGCTA +
Preference number: 5 (lower is better)
Translates to: VFPEGNHYASTAELHVYSGTDIC*PMMILL
Trigger: TAGCAAGATCATCATAGGCAAACATATATCCGTTCC...AGAATAAACATGAAGCTCAGCAGTAGAAGCGTAATGATTTCCCTCAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS-3UTR CAA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAAAAGCCACTGGGCCTaGAGATCCTTGGTCTATTTT +
Preference number: 5 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSKSHWA*RSLVYF
Trigger: AAAATAGACCAAGGATCTCAAGGCCCAGTGGCTTTT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTTGGGCCTTGAGATCCTaGGTCTATTTTTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSWALRS*VYFYSK
Trigger: TTTACTGTAAAAATAGACCAAGGATCTCAAGGCCCA...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTGGGCCAAAGAATGTTTaGACAAACGAAAGGTACAAA +
Preference number: 5 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSGPKNV*TNERYK
Trigger: TTTGTACCTTTCGTTTGTCAAAACATTCTTTGGCCC...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS-3UTR CAA 90 bp TTTCATCATACTTTGAAAAGGAAACTCCCACTGGAGCTAAAACAAACTTACAGTAATAAGGACACCCAGTaGAAGTCACTAATCTATGTT +
Preference number: 5 (lower is better)
Translates to: FHHTLKRKLPLELKQTYSNKDTQ*KSLIYV
Trigger: AACATAGATTAGTGACTTCAACTGGGTGTCCTTATT...ACTGTAAGTTTGTTTTAGCTCCAGTGGGAGTTTCCTTTTCAAAGTATGATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS CCA 72 bp TCCCACTTGGAGAACCAGTGCTCGGGCCCGTGCTCCTaGATCTCGGCCTCGCCCTCCTCCTTCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SHLENQCSGPCS*ISASPSSFRSS
Trigger: GGAGGAGCGGAAGGAGGAGGGCGAGGCCGAGATCCAGGAGCACGGGCCCGAGCACTGGTTCTCCAAGTGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS CCA 72 bp AGCATTCGATCCACTGCTTACATGTGTAGGAGAGCCTaGGGTACTCGAACGCACGCTTATACTAGCCATTGC +
Preference number: 6 (lower is better)
Translates to: SIRSTAYMCRRA*GTRTHAYTSHC
Trigger: GCAATGGCTAGTATAAGCGTGCGTTCGAGTACCCCAGGCTCTCCTACACATGTAAGCAGTGGATCGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS CCA 72 bp TTATGGGTTGGTGAGTCTGTAATGACATCGCCACACTaGGCTGAGGTACGCTTTCTAGTTCCACCATTGTCC +
Preference number: 6 (lower is better)
Translates to: LWVGESVMTSPH*AEVRFLVPPLS
Trigger: GGACAATGGTGGAACTAGAAAGCGTACCTCAGCCCAGTGTGGCGATGTCATTACAGACTCACCAACCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS GCA 72 bp CTAAGACCATGCAGAGCTATGGCTTCCCGGAAGGGTTaGAAATCAGTCTCTACAGATGAGCTAGTTTCCGTT +
Preference number: 6 (lower is better)
Translates to: LRPCRAMASRKG*KSVSTDELVSV
Trigger: AACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS GCA 72 bp GCTTTACCATGCAGAGCTATGGCTTCCCGGAAGGGTTaGAAATCAGTCTCTACAGATGAGCTAGTTTCCGTT +
Preference number: 6 (lower is better)
Translates to: ALPCRAMASRKG*KSVSTDELVSV
Trigger: AACGGAAACTAGCTCATCTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS CAA 72 bp CCACACTGGGCTGAGGTACGCTTTCTAGTTCCACCATaGTCCAAGTGGAGTGCCATTTCTTCTGATATGAAA +
Preference number: 6 (lower is better)
Translates to: PHWAEVRFLVPP*SKWSAISSDMK
Trigger: TTTCATATCAGAAGAAATGGCACTCCACTTGGACAATGGTGGAACTAGAAAGCGTACCTCAGCCCAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS CCA 72 bp AGAAATATGTTTAAACGGCTTTACCATGCAGAGCTATaGCTTCCCGGAAGGGTTGCAAATCAGTCTCTACAG +
Preference number: 6 (lower is better)
Translates to: RNMFKRLYHAEL*LPGRVANQSLQ
Trigger: CTGTAGAGACTGATTTGCAACCCTTCCGGGAAGCCATAGCTCTGCATGGTAAAGCCGTTTAAACATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574285.2
CDS TCA 72 bp AGTTCCACCATTGTCCAAGTGGAGTGCCATTTCTTCTaGTATGAAAGTGTTCAAATCGACATCATGGAGTCC +
Preference number: 6 (lower is better)
Translates to: SSTIVQVECHFF*YESVQIDIMES
Trigger: GGACTCCATGATGTCGATTTGAACACTTTCATATCAGAAGAAATGGCACTCCACTTGGACAATGGTGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS TCA 72 bp CACCATTGTCCAAGTGGAGTGCCATTTCTTCTGATATaGAAGTGTTCAAATCGACATCATGGAGTCCATTTC +
Preference number: 6 (lower is better)
Translates to: HHCPSGVPFLLI*KCSNRHHGVHF
Trigger: GAAATGGACTCCATGATGTCGATTTGAACACTTTCATATCAGAAGAAATGGCACTCCACTTGGACAATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12
CDS CCA 72 bp ATTTCTTCTGATATGAAAGTGTTCAAATCGACATCATaGAGTCCATTTCTCCTTCGACTAGCATTCGATCCA +
Preference number: 6 (lower is better)
Translates to: ISSDMKVFKSTS*SPFLLRLAFDP
Trigger: TGGATCGAATGCTAGTCGAAGGAGAAATGGACTCCATGATGTCGATTTGAACACTTTCATATCAGAAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327827.12