Pregenerated sensors for C15ORF61 (Homo sapiens)
Ensembl gene IDs: ENSG00000189227Ensembl transcript IDs: ENST00000342683.6, ENST00000557807.1, ENST00000560041.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATaGCACTTCAGGGTTAGTGGGCATGTGCTATCAATGCATCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: KLLICRREGPLQLPT*HFRVSGHVLSMHLS Trigger: GGAGAGATGCATTGATAGCACATGCCCACTAACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR GCA 90 bp | GGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTTAGTGGGCATGTaGTATCAATGCATCTCTCCTTCTTTCTCCATCACCTTATTTTTG | + |
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Preference number: 1 (lower is better) Translates to: GLFSSPHATSGLVGM*YQCISPSFSITLFL Trigger: CAAAAATAAGGTGATGGAGAAAGAAGGAGAGATGCATTGATAGCACATGCCCACTAACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR CCA 90 bp | AACAAGAAGTTTCAACATTACACTCCAACCCCTCCTCCAGGTAAATaGCACAAGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: NKKFQHYTPTPPPGK*HKAFKTFLFTILAA Trigger: AGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCTTGTGCCATTTACCTGGAGGAGGGGTTGGAGTGTAATGTTGAAACTTCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR CCA 90 bp | CAGGTAAATGGCACAAGGCCTTTAAAACGTTTCTATTTACAATCCTaGCAGCTGAATGGTTTAGACTTGAGATTACAATTAGATTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: QVNGTRPLKRFYLQS*QLNGLDLRLQLDSH Trigger: ATGAGAATCTAATTGTAATCTCAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCTTGTGCCATTTACCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR TCA 90 bp | GACCAAACCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATaGGCAGTATTTGACTTAAAACTTATGAGCTATAGTTATTTAACT | + |
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Preference number: 1 (lower is better) Translates to: DQTFTATIDKTSSNE*AVFDLKLMSYSYLT Trigger: AGTTAAATAACTATAGCTCATAAGTTTTAAGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGGTTTGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTCCTCCTCCAGGTAAATaGCACAAGGCCTTTAAAACG | + |
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Preference number: 2 (lower is better) Translates to: TDMQKRRASSAPHMPLQGPPPGK*HKAFKT Trigger: CGTTTTAAAGGCCTTGTGCCATTTACCTGGAGGAGG...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTGCCTTTACCCATTGTTaGGTTAGTTCATCCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: TDMQKRRASSAPHMPLQGAFTHC*VSSSFT Trigger: GGTGAAGGATGAACTAACTCAACAATGGGTAAAGGC...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTGGAGAGTTATTAGCCTaGGGTCAAAAAGTAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: TDMQKRRASSAPHMPLQGGELLA*GQKVRQ Trigger: CTGTCTTACTTTTTGACCTCAGGCTAATAACTCTCC...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR TCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGAGGTGCAACTCTACTaGAAAGCTGTATTTATAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLICRREGPLQLPTCHFREVQLY*KAVFIV Trigger: GACTATAAATACAGCTTTTCAGTAGAGTTGCACCTC...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR TCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGACCAGCAGCAATGAATaGGCAGTATTTGACTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LLICRREGPLQLPTCHFRTSSNE*AVFDLK Trigger: TTTTAAGTCAAATACTGCTCATTCATTGCTGCTGGT...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGCCCTTCTCTTTTGTGTaGGCATCTATATTTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLICRREGPLQLPTCHFRPFSFV*ASIFSL Trigger: AAGAGAAAATATAGATGCCCACACAAAAGAGAAGGG...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR GCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGAGTTTCATTCACCTTaGTACACTTATATTAACCAG | + |
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Preference number: 2 (lower is better) Translates to: LLICRREGPLQLPTCHFREFHSP*YTYINQ Trigger: CTGGTTAATATAAGTGTAGCAAGGTGAATGAAACTC...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACACTCACTTTCTCTACTaGCTTGACATAAGCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHTHFLY*LDISIQ Trigger: TTGGATGCTTATGTCAAGTCAGTAGAGAAAGTGAGT...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CAA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTCCTTTACAGCCACTATaGACAAGACCAGCAGCAATG | + |
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Preference number: 3 (lower is better) Translates to: TDMQKRRASSAPHMPLQGPLQPL*TRPAAM Trigger: CATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR GCA 72 bp | ATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATaGCACTTCAGGGTTAGTGGGCATGTGCTATCAATG | + |
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Preference number: 3 (lower is better) Translates to: ICRREGPLQLPT*HFRVSGHVLSM Trigger: CATTGATAGCACATGCCCACTAACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CAA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGACCATTTTATCAGCCTaGTGTTGGGACCAAACCTTT | + |
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Preference number: 3 (lower is better) Translates to: LLICRREGPLQLPTCHFRTILSA*CWDQTF Trigger: AAAGGTTTGGTCCCAACACAAGGCTGATAAAATGGT...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGTCAGCCCACTCCTTATaGCCAATAAGTCTATGGATA | + |
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Preference number: 3 (lower is better) Translates to: VSTSDKKSRPCLMLQAAESAHSL*PISLWI Trigger: TATCCATAGACTTATTGGCAATAAGGAGTGGGCTGA...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACTTTATCAGCCTTGTGTaGGGACCAAACCTTTACAGC | + |
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Preference number: 3 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHFISLV*GPNLYS Trigger: GCTGTAAAGGTTTGGTCCCAACACAAGGCTGATAAA...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACAAAAAGCTTCACCTCTaGAGGGCAATGATTCATCTT | + |
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Preference number: 3 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHKKLHL*RAMIHL Trigger: AAGATGAATCATTGCCCTCAAGAGGTGAAGCTTTTT...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR TCA 72 bp | GCCTTCACCTCAGTCACTTCCACTCACTTTCTCTACTaGCTTGACATAAGCATCCAAATGTTGAATTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AFTSVTSTHFLY*LDISIQMLNFI Trigger: TATAAAATTCAACATTTGGATGCTTATGTCAAGTCAGTAGAGAAAGTGAGTGGAAGTGACTGAGGTGAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR GCA 72 bp | TTAACGAAGCTAGTTTGTATTACTTCATTATTCTGGTaGCTTCACCTCAGTCACTTCCACTCACTTTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: LTKLVCITSLFW*LHLSHFHSLSL Trigger: TAGAGAAAGTGAGTGGAAGTGACTGAGGTGAAGGCACCAGAATAATGAAGTAATACAAACTAGCTTCGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR TCA 72 bp | TTTACAGCCACTATTGACAAGACCAGCAGCAATGAATaGGCAGTATTTGACTTAAAACTTATGAGCTATAGT | + |
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Preference number: 3 (lower is better) Translates to: FTATIDKTSSNE*AVFDLKLMSYS Trigger: ACTATAGCTCATAAGTTTTAAGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR TCA 72 bp | ATATTTAAATTTTTAAACCACGCCTTTACCCATTGTTaGGTTAGTTCATCCTTCACCATGATCAACTCCGTA | + |
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Preference number: 3 (lower is better) Translates to: IFKFLNHAFTHC*VSSSFTMINSV Trigger: TACGGAGTTGATCATGGTGAAGGATGAACTAACTCAACAATGGGTAAAGGCGTGGTTTAAAAATTTAAATAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTCAGAAGGAGGTCCAGTaGGGCAGGCGCCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TDMQKRRASSAPHMPLQGQKEVQ*GRRRCS Trigger: GCTGCAGCGGCGCCTGCCGCACTGGACCTCCTTCTG...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTTGCCGGGCCAGGTCCTaGCAGGGAGCCTTGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TDMQKRRASSAPHMPLQGCRARS*QGALEQ Trigger: CTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCA...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGCGGAGCGCGACCTCGTaGGCCCTCCTCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAERSATS*ALLRAS Trigger: GGAGGCCCTGAGGAGGGCCCACGAGGTCGCGCTCCG...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGTGCGAGAGGCCGAACTaGTCGTTGCGGACGGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLICRREGPLQLPTCHFRCERPN*SLRTAL Trigger: CAGCGCCGTCCGCAACGACCAGTTCGGCCTCTCGCA...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTACCGGCCAGTTGAAGTaGGAGAGGCCGAACTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: TDMQKRRASSAPHMPLQGTGQLK*ERPNWS Trigger: CGACCAGTTCGGCCTCTCGCACTTCAACTGGCCGGT...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGCTGGGAGGTGGAGGTTaGAGTGAGCCAAGGTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LLICRREGPLQLPTCHFRLGGGG*SEPRSH Trigger: GTGCGACCTTGGCTCACTGCAACCTCCACCTCCCAG...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTAGGTGGAGGTTGCAGTaGGCCAAGGTCGCACCATTG | + |
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Preference number: 4 (lower is better) Translates to: TDMQKRRASSAPHMPLQGRWRLQ*AKVAPL Trigger: CAATGGTGCGACCTTGGCTCACTGCAACCTCCACCT...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTTGCGGCAGGCGCCGCTaGAGCAGATGCCGCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTCGRRR*SRCRVS Trigger: GCTGACGCGGCATCTGCTGCAGCGGCGCCTGCCGCA...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGCTTCAGCTCCCCACATaGCACTTCAGGGTTAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LLICRREGPLQLPTCHFRLQLPT*HFRVSG Trigger: CCCACTAACCCTGAAGTGGCATGTGGGGAGCTGAAG...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGAGCTACTCAGGAGGCTaGGACAGGAGAATCGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAESYSGG*DRRIAW Trigger: CCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCT...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTAGGGGAAGCAGCCGGTaGGCAGGACGTGGTAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTRGSSR*AGRGSW Trigger: CCAACTACCACGTCCTGCGCACCGGCTGCTTCCCCT...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGGGCCGAACTGGTCGTTaGGGACGGCGCTGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLGRTGR*GRRCRA Trigger: TGCCCTACAGCGCCGTCCGCAACGACCAGTTCGGCC...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGGCATGTGCTATCAATaGATCTCTCCTTCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLICRREGPLQLPTCHFRGMCYQ*ISPSFS Trigger: GGAGAAAGAAGGAGAGATGCATTGATAGCACATGCC...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACGCAGGACGTGGTAGTTaGCGCCCTGCACCGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHAGRGS*RPAPAS Trigger: ACTGGCCGGTGCAGGGCGCCAACTACCACGTCCTGC...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGCCTGCACCGGCCAGTTaGAGTGCGAGAGGCCGAACT | + |
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Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLPAPAS*SARGRT Trigger: AGTTCGGCCTCTCGCACTTCAACTGGCCGGTGCAGG...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACGTGAAGAAGCGGTTCTaGCGGGCCAGGTCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHVKKRF*RARSCQ Trigger: CTGGCAGGACCTGGCCCGGCAGAACCGCTTCTTCAC...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTCAGTGTGAAAAGAGGTaGAACTCTACTGAAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: TDMQKRRASSAPHMPLQGQCEKR*NSTEKL Trigger: CAGCTTTTCAGTAGAGTTGCACCTCTTTTCACACTG...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGTATGCACAGTCTCTGTaGCTCTGGCAAATAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEYAQSL*LWQITR Trigger: CCTGGTTATTTGCCAGAGTCACAGAGACTGTGCATA...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTACTGACTATAGCTATTaGAAAACAGGTAAGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: TDMQKRRASSAPHMPLQGTDYSY*KTGKQS Trigger: ACTCTGCTTACCTGTTTTTCAATAGCTATAGTCAGT...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGGCCTTTACCCATTGTTaGGTTAGTTCATCCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEAFTHC*VSSSFT Trigger: GGTGAAGGATGAACTAACTCAACAATGGGTAAAGGC...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACGGCCGGCAGATCACCTaGGATCAGGAGTTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHGRQIT*DQEFKT Trigger: GGTCTTGAACTCCTGATCTCAGGTGATCTGCCGGCC...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGCATCTGGGTATTTTGTaGCTACCCCAAGGATACATT | + |
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Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEHLGIL*LPQGYI Trigger: AATGTATCCTTGGGGTAGTCACAAAATACCCAGATG...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGGACAGGAGAATCGCTTaGACCTGGGAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLDRRIA*TWEVEV Trigger: AACCTCCACCTCCCAGGTCCAAGCGATTCTCCTGTC...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGACTCACTTTCTCTACTaGCTTGACATAAGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAETHFLY*LDISIQ Trigger: TTGGATGCTTATGTCAAGTCAGTAGAGAAAGTGAGT...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGGAGGTGCAACTCTACTaGAAAGCTGTATTTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEEVQLY*KAVFIV Trigger: GACTATAAATACAGCTTTTCAGTAGAGTTGCACCTC...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTTCAAACAGGCCAGTGTaGAAAGAGGTGCAACTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTSNRPV*KEVQLY Trigger: GTAGAGTTGCACCTCTTTTCACACTGGCCTGTTTGA...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGTCCCAAATAGGTTACTaGATCTTTATAGTGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAESQIGY*IFIVAH Trigger: GTGAGCCACTATAAAGATGCAGTAACCTATTTGGGA...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGGGAGCCTTGGAGCAGTaGTACTTGATGAAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLGALEQ*YLMKGK Trigger: CTTCCCCTTCATCAAGTACCACTGCTCCAAGGCTCC...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGGAGTTTCATTCACCTTaGTACACTTATATTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEEFHSP*YTYINQ Trigger: CTGGTTAATATAAGTGTAGCAAGGTGAATGAAACTC...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGGGGTTAGTGGGCATGTaGTATCAATGCATCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLGLVGM*YQCISP Trigger: AGGAGAGATGCATTGATAGCACATGCCCACTAACCC...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGTGGAGCAGAAGAATGTaGATTATAAAAACAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEWSRRM*IIKTEL Trigger: AAGCTCTGTTTTTATAATCCACATTCTTCTGCTCCA...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTAGAAAACTACTGATATaGAGAAGAGAAGGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTRKLLI*RREGPL Trigger: AAGAGGCCCTTCTCTTCTGCATATCAGTAGTTTTCT...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGGGAGAGTTATTAGCCTaGGGTCAAAAAGTAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLGELLA*GQKVRQ Trigger: CTGTCTTACTTTTTGACCTCAGGCTAATAACTCTCC...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR GCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGAGTTCTAGCCTTCCCTaGAAAATGCTAATAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLSSSLP*KMLIAS Trigger: ACTGGCTATTAGCATTTTGCAGGGAAGGCTAGAACT...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR TCA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACACCAGCAGCAATGAATaGGCAGTATTTGACTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHTSSNE*AVFDLK Trigger: TTTTAAGTCAAATACTGCTCATTCATTGCTGCTGGT...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGCCCTTCTCTTTTGTGTaGGCATCTATATTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLPFSFV*ASIFSL Trigger: AAGAGAAAATATAGATGCCCACACAAAAGAGAAGGG...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CCA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACTTCTCAGATTACAGGTaGAAAAACCAAGACACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHFSDYR*KNQDTK Trigger: CTTTGTGTCTTGGTTTTTCCACCTGTAATCTGAGAA...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| 3UTR CAA 72 bp | TATAGTGGCTCACAACTTACACAGGAACTAAGAATTTaGCCTAGGAATTTGCCTAGAAATTTATTCCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: YSGSQLTQELRI*PRNLPRNLFQY Trigger: GTATTGGAATAAATTTCTAGGCAAATTCCTAGGCAAAATTCTTAGTTCCTGTGTAAGTTGTGAGCCACTATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CCA 90 bp | CGCGAGGCCCACGGCCTACACAGCAGCAGGCGGAGCGCGACCTCGTaGGCCCTCCTCAGGGCCTCCATGGCCCGCCGCGCCGGGGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: REAHGLHSSRRSATS*ALLRASMARRAGDA Trigger: TGCGTCCCCGGCGCGGCGGGCCATGGAGGCCCTGAGGAGGGCCCACGAGGTCGCGCTCCGCCTGCTGCTGTGTAGGCCGTGGGCCTCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CCA 90 bp | GCAGGCGCCGCTGCAGCAGATGCCGCGTCAGCACCTCCGAGGCGCTaGGCTTGGGGCGGGCGGCGGCGCGCGAGGCCCACGGCCTACACA | + |
|
Preference number: 5 (lower is better) Translates to: AGAAAADAASAPPRR*AWGGRRRARPTAYT Trigger: TGTGTAGGCCGTGGGCCTCGCGCGCCGCCGCCCGCCCCAAGCCCAGCGCCTCGGAGGTGCTGACGCGGCATCTGCTGCAGCGGCGCCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS GCA 90 bp | TCCCTAGGCCCGAGGACGCGCCCGCAGCAGGCGAACGGCTTCGGGTaGCAGGAGCTCAGCAAGCTGGGGACCCCCTGGGCGAGGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SLGPRTRPQQANGFG*QELSKLGTPWARST Trigger: TGTACTCCTCGCCCAGGGGGTCCCCAGCTTGCTGAGCTCCTGGCACCCGAAGCCGTTCGCCTGCTGCGGGCGCGTCCTCGGGCCTAGGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557807.1 ENST00000560041.1 |
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| CDS CCA 90 bp | GCCCGCAGCAGGCGAACGGCTTCGGGTGCCAGGAGCTCAGCAAGCTaGGGACCCCCTGGGCGAGGAGTACAAAGGACCCCAGGCGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSRRTASGARSSAS*GPPGRGVQRTPGEA Trigger: GGCTTCGCCTGGGGTCCTTTGTACTCCTCGCCCAGGGGGTCCCCAGCTTGCTGAGCTCCTGGCACCCGAAGCCGTTCGCCTGCTGCGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557807.1 ENST00000560041.1 |
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| CDS TCA 90 bp | AGCCGGTGCGCAGGACGTGGTAGTTGGCGCCCTGCACCGGCCAGTTaGAGTGCGAGAGGCCGAACTGGTCGTTGCGGACGGCGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRCAGRGSWRPAPAS*SARGRTGRCGRRCR Trigger: CCTACAGCGCCGTCCGCAACGACCAGTTCGGCCTCTCGCACTTCAACTGGCCGGTGCAGGGCGCCAACTACCACGTCCTGCGCACCGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS GCA 90 bp | ACGACCTTGAGCGCCGTGAAGAAGCGGTTCTGCCGGGCCAGGTCCTaGCAGGGAGCCTTGGAGCAGTGGTACTTGATGAAGGGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLSAVKKRFCRARS*QGALEQWYLMKGKQ Trigger: CTGCTTCCCCTTCATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCAGAACCGCTTCTTCACGGCGCTCAAGGTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS GCA 90 bp | GGAATACCGAGGTTGACGACCTTGAGCGCCGTGAAGAAGCGGTTCTaGCGGGCCAGGTCCTGCCAGGGAGCCTTGGAGCAGTGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GIPRLTTLSAVKKRF*RARSCQGALEQWYL Trigger: CAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCAGAACCGCTTCTTCACGGCGCTCAAGGTCGTCAACCTCGGTATTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGCCGAGGTTGACGACCTaGAGCGCCGTGAAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLICRREGPLQLPTCHFRPRLTT*SAVKKR Trigger: CCGCTTCTTCACGGCGCTCAAGGTCGTCAACCTCGG...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGCCAAGGTCGCACCATaGCACTCCAGCCTAGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLICRREGPLQLPTCHFRAKVAP*HSSLDN Trigger: GTTGTCTAGGCTGGAGTGCAATGGTGCGACCTTGGC...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | CTACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGAGACAGGAGAATCGCTaGGACCTGGGAGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLICRREGPLQLPTCHFRRQENR*DLGGGG Trigger: ACCTCCACCTCCCAGGTCCAAGCGATTCTCCTGTCT...CCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTCCCTGCACCGGCCAGTaGAAGTGCGAGAGGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTPCTGQ*KCERPN Trigger: GTTCGGCCTCTCGCACTTCAACTGGCCGGTGCAGGG...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGTCCTGCCAGGGAGCCTaGGAGCAGTGGTACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSTSDKKSRPCLMLQAAESCQGA*EQWYLM Trigger: CATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGA...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGTTGGAGCAGTGGTACTaGATGAAGGGGAAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VSTSDKKSRPCLMLQAAELEQWY*MKGKQP Trigger: CGGCTGCTTCCCCTTCATCAAGTACCACTGCTCCAA...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTTTTATCAGCCTTGTGTaGGGACCAAACCTTTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDMQKRRASSAPHMPLQGFISLV*GPNLYS Trigger: GCTGTAAAGGTTTGGTCCCAACACAAGGCTGATAAA...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTACCATTTTATCAGCCTaGTGTTGGGACCAAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDMQKRRASSAPHMPLQGTILSA*CWDQTF Trigger: AAAGGTTTGGTCCCAACACAAGGCTGATAAAATGGT...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | ACTGATATGCAGAAGAGAAGGGCCTCTTCAGCTCCCCACATGCCACTTCAGGGTCAGGAACTAAGAATTTaGCCTAGGAATTTGCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TDMQKRRASSAPHMPLQGQELRI*PRNLPR Trigger: TCTAGGCAAATTCCTAGGCAAAATTCTTAGTTCCTG...ACCCTGAAGTGGCATGTGGGGAGCTGAAGAGGCCCTTCTCTTCTGCATATCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | AGGCCTTTAAAACGTTTCTATTTACAATCCTGGCAGCTGAATGGTTTAGACTTGGTTGGAATACCGAGGTaGACGACCTTGAGCGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPLKRFYLQSWQLNGLDLVGIPR*TTLSAV Trigger: CACGGCGCTCAAGGTCGTCAACCTCGGTATTCCAAC...CAAGTCTAAACCATTCAGCTGCCAGGATTGTAAATAGAAACGTTTTAAAGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | GTGAGCACATCAGACAAGAAATCAAGGCCCTGTTTAATGCTGCAAGCAGCAGAGGTGAAACCAAGATCTTaGCCTTTTATGTCATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSDKKSRPCLMLQAAEVKPRS*PFMSSH Trigger: GTGGGATGACATAAAAGGCAAAGATCTTGGTTTCAC...CTCTGCTGCTTGCAGCATTAAACAGGGCCTTGATTTCTTGTCTGATGTGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTAAAAAGCTTCACCTCTaGAGGGCAATGATTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTKKLHL*RAMIHL Trigger: AAGATGAATCATTGCCCTCAAGAGGTGAAGCTTTTT...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | CCTTTACAGCCACTATTGACAAGACCAGCAGCAATGAATGAGCAGTATTTGACTACAAACGATATGGTTTaGGACTCTTTAAGCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLQPLLTRPAAMNEQYLTTNDMV*DSLSNK Trigger: CTTGTTGCTTAAAGAGTCCAAAACCATATCGTTTGT...AGTCAAATACTGCTCATTCATTGCTGCTGGTCTTGTCAATAGTGGCTGTAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS-3UTR CAA 90 bp | AGAAATGTCTCTTGTTTCGTTCTTCTCAGATTACAGGTGGAAAAACCAAGACACTCAGCCCACTCCTTATaGCCAATAAGTCTATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RNVSCFVLLRLQVEKPRHSAHSL*PISLWI Trigger: TATCCATAGACTTATTGGCAATAAGGAGTGGGCTGA...GTGTCTTGGTTTTTCCACCTGTAATCTGAGAAGAACGAAACAAGAGACATTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CCA 72 bp | GCTGCAGCAGATGCCGCGTCAGCACCTCCGAGGCGCTaGGCTTGGGGCGGGCGGCGGCGCGCGAGGCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: AAADAASAPPRR*AWGGRRRARPT Trigger: CGTGGGCCTCGCGCGCCGCCGCCCGCCCCAAGCCCAGCGCCTCGGAGGTGCTGACGCGGCATCTGCTGCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS GCA 72 bp | GGCACGCAGAAGGAGGTCCAGTGCGGCAGGCGCCGCTaGAGCAGATGCCGCGTCAGCACCTCCGAGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTQKEVQCGRRR*SRCRVSTSEAL Trigger: CAGCGCCTCGGAGGTGCTGACGCGGCATCTGCTGCAGCGGCGCCTGCCGCACTGGACCTCCTTCTGCGTGCC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS TCA 72 bp | GCAGGACGTGGTAGTTGGCGCCCTGCACCGGCCAGTTaGAGTGCGAGAGGCCGAACTGGTCGTTGCGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: AGRGSWRPAPAS*SARGRTGRCGR Trigger: CCGTCCGCAACGACCAGTTCGGCCTCTCGCACTTCAACTGGCCGGTGCAGGGCGCCAACTACCACGTCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CCA 72 bp | TGCCGGGCCAGGTCCTGCCAGGGAGCCTTGGAGCAGTaGTACTTGATGAAGGGGAAGCAGCCGGTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRARSCQGALEQ*YLMKGKQPVRR Trigger: CCTGCGCACCGGCTGCTTCCCCTTCATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CCA 72 bp | AGGCGAACGGCTTCGGGTGCCAGGAGCTCAGCAAGCTaGGGACCCCCTGGGCGAGGAGTACAAAGGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRTASGARSSAS*GPPGRGVQRTP Trigger: TGGGGTCCTTTGTACTCCTCGCCCAGGGGGTCCCCAGCTTGCTGAGCTCCTGGCACCCGAAGCCGTTCGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557807.1 ENST00000560041.1 |
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| CDS CAA 90 bp | GCCGTGAAGAAGCGGTTCTGCCGGGCCAGGTCCTGCCAGGGAGCCTaGGAGCAGTGGTACTTGATGAAGGGGAAGCAGCCGGTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVKKRFCRARSCQGA*EQWYLMKGKQPVRR Trigger: CCTGCGCACCGGCTGCTTCCCCTTCATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCAGAACCGCTTCTTCACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS GCA 72 bp | AGGTTGACGACCTTGAGCGCCGTGAAGAAGCGGTTCTaGCGGGCCAGGTCCTGCCAGGGAGCCTTGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLTTLSAVKKRF*RARSCQGALEQ Trigger: CTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCAGAACCGCTTCTTCACGGCGCTCAAGGTCGTCAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CAA 72 bp | GCCAGGTCCTGCCAGGGAGCCTTGGAGCAGTGGTACTaGATGAAGGGGAAGCAGCCGGTGCGCAGGACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARSCQGALEQWY*MKGKQPVRRTW Trigger: CCACGTCCTGCGCACCGGCTGCTTCCCCTTCATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS CAA 72 bp | AAGCGGTTCTGCCGGGCCAGGTCCTGCCAGGGAGCCTaGGAGCAGTGGTACTTGATGAAGGGGAAGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRFCRARSCQGA*EQWYLMKGKQP Trigger: CGGCTGCTTCCCCTTCATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCAGAACCGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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| CDS GCA 72 bp | AGCGCCGTGAAGAAGCGGTTCTGCCGGGCCAGGTCCTaGCAGGGAGCCTTGGAGCAGTGGTACTTGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAVKKRFCRARS*QGALEQWYLMK Trigger: CTTCATCAAGTACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCAGAACCGCTTCTTCACGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342683.6 |
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