Pregenerated sensors for C15ORF48 (Homo sapiens)
Ensembl gene IDs: ENSG00000166920Ensembl transcript IDs: ENST00000344300.3, ENST00000396650.7, ENST00000558435.5, ENST00000558632.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCAGCATTTCCGCACACTaGTGTCCAGAATCTAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPSISAH*CPESSL Trigger: CAAACTAGATTCTGGACACCAGTGTGCGGAAATGCT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCTGGACGCCGGGCGGTaGGCACGGACGATGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPLDAGR*ARTMVT Trigger: CGTTACCATCGTCCGTGCGCACCGCCCGGCGTCCAG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCGATGGGAGACTCACCTaGACGCCGGGCGGTGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPDGRLT*TPGGAH Trigger: GTGCGCACCGCCCGGCGTCCAGGTGAGTCTCCCATC...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344300.3 |
||
| CDS-3UTR GCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCGCGCGTCCGCGTCTCTaGAGATGGGAGACTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPARPRL*RWETHL Trigger: CAGGTGAGTCTCCCATCTGCAGAGACGCGGACGCGC...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344300.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCCGCGTCTCTGCAGATaGGAGACTCACCTGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPPRLCR*ETHLDA Trigger: GGCGTCCAGGTGAGTCTCCCATCTGCAGAGACGCGG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344300.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCATACACAGCGAAAGATaGGGCTCCACCCGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPIHSER*GSTRRH Trigger: GTGGCGGCGGGTGGAGCCTCATCTTTCGCTGTGTAT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCGTATTGATCGCCTGGTaGGCGCCAAACCGTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPVLIAW*APNRPP Trigger: CGGTGGACGGTTTGGCGCCCACCAGGCGATCAATAC...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344300.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCAAGAATTGCCAAATCTaGACGCCGGGCGGTGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPKNCQI*TPGGAH Trigger: GTGCGCACCGCCCGGCGTCCAGATTTGGCAATTCTT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396650.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCACTTCAGCGAAGAATTaGCAAATCTGGACGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPTSAKN*QIWTPG Trigger: GCCCGGCGTCCAGATTTGGCAATTCTTCGCTGAAGT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396650.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCAAAGTATTGATCGCCTaGTGGGCGCCAAACCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPKVLIA*WAPNRP Trigger: TGGACGGTTTGGCGCCCACCAGGCGATCAATACTTT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344300.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCAAAAATCCAAAGTATTaGTCGCCTGGTGGGCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPKNPKY*SPGGRQ Trigger: TTGGCGCCCACCAGGCGATCAATACTTTGGATTTTT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344300.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCGAGGGCTCGTCATTTaGTCACCCTTTGGACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPRGLVI*SPFGHF Trigger: AAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCACACCACCAAGGGAATaGGTTCCTTCCTTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPTPPRE*VPSFSS Trigger: TGATGAAAAGGAAGGAACTCATTCCCTTGGTGGTGT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCATTGTTATAAGCTTTTaGGGTACAGTAGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPIVISF*GTVGST Trigger: TGTGGACCCTACTGTACCTCAAAAGCTTATAACAAT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCACCCTTTGGACATTTTaGAACTCTTCAATGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPTLWTF*NSSMGF Trigger: GAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGT...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCATTTGGTCACCCTTTaGACATTTTGCAACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPHLVTL*TFCNSS Trigger: TGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCAGTGCAGTTATTGCTaGACTCCTTTAATTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPQCSYC*TPLIPY Trigger: ATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CCA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCTTTTCATCAGGAGTTaGAAAAAGCTCATGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPLFIRS*KKLMMT Trigger: AGTCATCATGAGCTTTTTCCAACTCCTGATGAAAAG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS GCA 90 bp | CACCGCGCTCCGCAGGCCAACTGCGGGCCGGCGCGTCCGCGTCTCTaGAGATGGGAGACTCACCTGGACGCCGGGCGGTGCGCACGGACG | + |
|
Preference number: 5 (lower is better) Translates to: HRAPQANCGPARPRL*RWETHLDAGRCART Trigger: CGTCCGTGCGCACCGCCCGGCGTCCAGGTGAGTCTCCCATCTGCAGAGACGCGGACGCGCCGGCCCGCAGTTGGCCTGCGGAGCGCGGTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000558632.1 |
||
| CDS GCA 90 bp | TCGCCTGGTGGGCGCCAAACCGTCCACCGCGCTCCGCAGGCCAACTaGGGGCCGGCGCGTCCGCGTCTCTGCAGATGGGAGACTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGGRQTVHRAPQAN*GPARPRLCRWETHL Trigger: CAGGTGAGTCTCCCATCTGCAGAGACGCGGACGCGCCGGCCCGCAGTTGGCCTGCGGAGCGCGGTGGACGGTTTGGCGCCCACCAGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000558632.1 |
||
| CDS CCA 90 bp | GCTCCGCAGGCCAACTGCGGGCCGGCGCGTCCGCGTCTCTGCAGATaGGAGACTCACCTGGACGCCGGGCGGTGCGCACGGACGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: APQANCGPARPRLCR*ETHLDAGRCARTMV Trigger: TACCATCGTCCGTGCGCACCGCCCGGCGTCCAGGTGAGTCTCCCATCTGCAGAGACGCGGACGCGCCGGCCCGCAGTTGGCCTGCGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000558632.1 |
||
| CDS TCA 90 bp | GGCTGGTTCTTCCTCCTTCAAATTCATTCCTTTTCTGACCATTTGTaGCCTTCCTGTGGCCTGGAGTTGTCGAAGACTCCTGGGGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GWFFLLQIHSFSDHL*PSCGLELSKTPGEI Trigger: AATTTCCCCAGGAGTCTTCGACAACTCCAGGCCACAGGAAGGTCACAAATGGTCAGAAAAGGAATGAATTTGAAGGAGGAAGAACCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558435.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCGACTTCAGCGAAGAATaGCCAAATCTGGACGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPDFSEE*PNLDAG Trigger: CCCGGCGTCCAGATTTGGCAATTCTTCGCTGAAGTC...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396650.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCGCGAGGGCTCGTCATTaGGTCACCCTTTGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPARARH*VTLWTF Trigger: AAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGC...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CCA 90 bp | TTCAAATTCATTCCTTTTCTGACCATTTGTGACCTTCCTGTGGCCTaGAGTTGTCGAAGACTCCTGGGGAAATTCCATGGTTTCCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FKFIPFLTICDLPVA*SCRRLLGKFHGFLA Trigger: TGCAAGGAAACCATGGAATTTCCCCAGGAGTCTTCGACAACTCCAGGCCACAGGAAGGTCACAAATGGTCAGAAAAGGAATGAATTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558435.5 |
||
| CDS CCA 90 bp | ACTCTTCAGAAGAAAGAGGCGAGGGCTCGTCATTTGGTCACCCTTTaGACATTTTGCAACTCTTCAATGGGTTTCCATTGTTGGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TLQKKEARARHLVTL*TFCNSSMGFHCWLI Trigger: AATCAACCAACAATGGAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTTCTGAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS GCA 90 bp | AAGAAAGAGGCGAGGGCTCGTCATTTGGTCACCCTTTGGACATTTTaGAACTCTTCAATGGGTTTCCATTGTTGGTTGATTGTTATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KKEARARHLVTLWTF*NSSMGFHCWLIVIS Trigger: GCTTATAACAATCAACCAACAATGGAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CCA 90 bp | ATGAACACCACCAAGGGAATGAGTTCCTTCCTTTTCATCAGGAGTTaGAAAAAGCTCATGATGACTTCAGCGAAGAATTGCCAAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MNTTKGMSSFLFIRS*KKLMMTSAKNCQIW Trigger: CCAGATTTGGCAATTCTTCGCTGAAGTCATCATGAGCTTTTTCCAACTCCTGATGAAAAGGAAGGAACTCATTCCCTTGGTGGTGTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396650.7 ENST00000558435.5 |
||
| CDS CCA 90 bp | ATTTATAGAGTACTCTTCAGAAGAAAGAGGCGAGGGCTCGTCATTTaGTCACCCTTTGGACATTTTGCAACTCTTCAATGGGTTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IYRVLFRRKRRGLVI*SPFGHFATLQWVSI Trigger: AATGGAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTTCTGAAGAGTACTCTATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCCCTTTTCATCAGGAGTaGGAAAAAGCTCATGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPPFHQE*EKAHDD Trigger: GTCATCATGAGCTTTTTCCAACTCCTGATGAAAAGG...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCGATTGTTATAAGCTTTaGAGGTACAGTAGGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPDCYKL*RYSRVH Trigger: GTGGACCCTACTGTACCTCAAAAGCTTATAACAATC...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS-3UTR CAA 90 bp | ACTTTTAGACAGTGCAGTTATTGCTGCACTCCTTTAATTCCTTATCCAGAGCCCTCATTTGGTCACCCTTaGGACATTTTGCAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFRQCSYCCTPLIPYPEPSFGHP*DILQLF Trigger: GAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGA...GGGCTCTGGATAAGGAATTAAAGGAGTGCAGCAATAACTGCACTGTCTAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS GCA 72 bp | CCGCAGGCCAACTGCGGGCCGGCGCGTCCGCGTCTCTaGAGATGGGAGACTCACCTGGACGCCGGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQANCGPARPRL*RWETHLDAGRC Trigger: GCACCGCCCGGCGTCCAGGTGAGTCTCCCATCTGCAGAGACGCGGACGCGCCGGCCCGCAGTTGGCCTGCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000558632.1 |
||
| CDS GCA 72 bp | GGGCGCCAAACCGTCCACCGCGCTCCGCAGGCCAACTaGGGGCCGGCGCGTCCGCGTCTCTGCAGATGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRQTVHRAPQAN*GPARPRLCRWE Trigger: CTCCCATCTGCAGAGACGCGGACGCGCCGGCCCGCAGTTGGCCTGCGGAGCGCGGTGGACGGTTTGGCGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000558632.1 |
||
| CDS GCA 72 bp | GGGGGCATGGGTTCTGTAGAAGGAAGGCACCCAGCTTaGAGTATGCAGGAGCCGAGACCTTTTGAGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: GGMGSVEGRHPA*SMQEPRPFEVQ Trigger: CTGTACCTCAAAAGGTCTCGGCTCCTGCATACTGCAAGCTGGGTGCCTTCCTTCTACAGAACCCATGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558435.5 |
||
| CDS CAA 90 bp | TGGCCTGGAGTTGTCGAAGACTCCTGGGGAAATTCCATGGTTTCCTaGCAAGGGGGCATGGGTTCTGTAGAAGGAAGGCACCCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WPGVVEDSWGNSMVS*QGGMGSVEGRHPAC Trigger: GCAAGCTGGGTGCCTTCCTTCTACAGAACCCATGCCCCCTTGCAAGGAAACCATGGAATTTCCCCAGGAGTCTTCGACAACTCCAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558435.5 |
||
| CDS CCA 72 bp | ATTCCTTTTCTGACCATTTGTGACCTTCCTGTGGCCTaGAGTTGTCGAAGACTCCTGGGGAAATTCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: IPFLTICDLPVA*SCRRLLGKFHG Trigger: ACCATGGAATTTCCCCAGGAGTCTTCGACAACTCCAGGCCACAGGAAGGTCACAAATGGTCAGAAAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558435.5 |
||
| CDS CCA 72 bp | GTACTCTTCAGAAGAAAGAGGCGAGGGCTCGTCATTTaGTCACCCTTTGGACATTTTGCAACTCTTCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: VLFRRKRRGLVI*SPFGHFATLQW Trigger: CCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTTCTGAAGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CAA 72 bp | GAAGAAAGAGGCGAGGGCTCGTCATTTGGTCACCCTTaGGACATTTTGCAACTCTTCAATGGGTTTCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: EERGEGSSFGHP*DILQLFNGFPL Trigger: CAATGGAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CCA 72 bp | AAGAAAGAGGCGAGGGCTCGTCATTTGGTCACCCTTTaGACATTTTGCAACTCTTCAATGGGTTTCCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: KKEARARHLVTL*TFCNSSMGFHC Trigger: ACAATGGAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CAA 72 bp | AGTACTCTTCAGAAGAAAGAGGCGAGGGCTCGTCATTaGGTCACCCTTTGGACATTTTGCAACTCTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: STLQKKEARARH*VTLWTFCNSSM Trigger: CATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTTCTGAAGAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CAA 90 bp | TACTCTTCAGAAGAAAGAGGCGAGGGCTCGTCATTTGGTCACCCTTaGGACATTTTGCAACTCTTCAATGGGTTTCCATTGTTGGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: YSSEERGEGSSFGHP*DILQLFNGFPLLVD Trigger: ATCAACCAACAATGGAAACCCATTGAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTCTTTCTTCTGAAGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000396650.7 |
||
| CDS CAA 90 bp | CATGAACACCACCAAGGGAATGAGTTCCTTCCTTTTCATCAGGAGTaGGAAAAAGCTCATGATGACTTCAGCGAAGAATTGCCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: HEHHQGNEFLPFHQE*EKAHDDFSEELPNL Trigger: CAGATTTGGCAATTCTTCGCTGAAGTCATCATGAGCTTTTTCCAACTCCTGATGAAAAGGAAGGAACTCATTCCCTTGGTGGTGTTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396650.7 ENST00000558435.5 |
||
| CDS CCA 72 bp | ACCAAGGGAATGAGTTCCTTCCTTTTCATCAGGAGTTaGAAAAAGCTCATGATGACTTCAGCGAAGAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: TKGMSSFLFIRS*KKLMMTSAKNC Trigger: GCAATTCTTCGCTGAAGTCATCATGAGCTTTTTCCAACTCCTGATGAAAAGGAAGGAACTCATTCCCTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000344300.3 ENST00000396650.7 ENST00000558435.5 ENST00000558632.1 |
||
| CDS CAA 90 bp | CATGAACACCACCAAGGGAATGAGTTCCTTCCTTTTCATCAGGAGTaGGAAAAAGCTCATGATGACTTCAGCGAAGAATTGCCAAATCTA | + |
|
Preference number: 6 (lower is better) Translates to: HEHHQGNEFLPFHQE*EKAHDDFSEELPNL Trigger: TAGATTTGGCAATTCTTCGCTGAAGTCATCATGAGCTTTTTCCAACTCCTGATGAAAAGGAAGGAACTCATTCCCTTGGTGGTGTTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000344300.3 ENST00000558632.1 |
||