Pregenerated sensors for C14ORF28 (Homo sapiens)
Ensembl gene IDs: ENSG00000179476Ensembl transcript IDs: ENST00000325192.8, ENST00000553841.1, ENST00000555826.5, ENST00000557112.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGGCACCAAGCACTTTAGCAGTTCAGCAGATGGCAGTGATCTGTaGTGTCATGTAGGAGCTTCTAAATATATTGCAACTAATCTCAAT | + |
|
Preference number: 1 (lower is better) Translates to: HGTKHFSSSADGSDL*CHVGASKYIATNLN Trigger: ATTGAGATTAGTTGCAATATATTTAGAAGCTCCTACATGACAGCACAGATCACTGCCATCTGCTGAACTGCTAAAGTGCTTGGTGCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTCATCTGGGAGAGCATaGGCAGGAGGGAAAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: SIASPTLVNIQLPNIVYSSSGRA*AGGKTT Trigger: AGTTGTTTTCCCTCCTGCCCATGCTCTCCCAGATGA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCCTGGGGTTAAACACTaGAAATACACTTCTGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: SIASPTLVNIQLPNIVYSPGVKH*KYTSET Trigger: AGTTTCAGAAGTGTATTTTCAGTGTTTAACCCCAGG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCTGGCATGGCCTCCATaGCAGCCGCCGCGGCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSLAWPP*QPPRRE Trigger: CTCCCGCCGCGGCGGCTGCCATGGAGGCCATGCCAG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCGGCCTCCCCCGGCGTaGGTTCTGGGCTCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSRPPPA*VLGSGM Trigger: CATGCCAGAGCCCAGAACTCACGCCGGGGGAGGCCG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCGCCGCCGCCGCCGCTaGCTCATCTATGAGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSRRRRR*LIYEYR Trigger: GCGGTACTCATAGATGAGGCAGCGGCGGCGGCGGCG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTTCTGGGCTCTGGCATaGCCTCCATGGCAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSFWALA*PPWQPP Trigger: CGGCGGCTGCCATGGAGGCCATGCCAGAGCCCAGAA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCCCCGGCGTGAGTTCTaGGCTCTGGCATGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSPRREF*ALAWPP Trigger: TGGAGGCCATGCCAGAGCCCAGAACTCACGCCGGGG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCCGCTGCCTCATCTATaGGTACCGCCGGCTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSPLPHL*VPPAVS Trigger: CGAGACAGCCGGCGGTACTCATAGATGAGGCAGCGG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCAGGCCCAATCTCACTaGACCCACGGAGCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSQAQSH*THGART Trigger: TGTCCTGGCTCCGTGGGTCCAGTGAGATTGGGCCTG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTGTGAGTTCTGGGCTCTaGCATGGCCTCCATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSVSSGL*HGLHGS Trigger: GCTGCCATGGAGGCCATGCCAGAGCCCAGAACTCAC...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCTCCTGCACTCGAGTTaGGCATCGCCAGTTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSLLHSS*ASPVGT Trigger: TGTTCCAACTGGCGATGCCCAACTCGAGTGCAGGAG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTACGGAGCCAGGACAGTaGGACACGTCGCTTCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSTEPGQ*DTSLLI Trigger: AATAAGAAGCGACGTGTCCCACTGTCCTGGCTCCGT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTTAATTGTGCGCTGCTaGTCCTCCTGCACTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSLIVRC*SSCTRV Trigger: AACTCGAGTGCAGGAGGATCAGCAGCGCACAATTAA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTTCAGCAGATGGCAGTaGTCTGTGCTGTCATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSFSRWQ*SVLSCR Trigger: CCTACATGACAGCACAGATCACTGCCATCTGCTGAA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTGGTGTACAGGATACTaGTTTGCGGCCAGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSWCTGY*FAASFD Trigger: ATCAAAGCTGGCCGCAAAGCAGTATCCTGTACACCA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTAAGCCACCACACCCATaGTCTTCACACAGTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSKPPHP*SSHSSI Trigger: GATTGAACTGTGTGAAGAGCATGGGTGTGGTGGCTT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTGATGGCAGTGATCTGTaGTGTCATGTAGGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSDGSDL*CHVGAS Trigger: AGAAGCTCCTACATGACAGCACAGATCACTGCCATC...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTAACTCTCTACCAAAATaGAGAGAGAGTTCCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSNSLPK*RESSLG Trigger: CCCTAGGGAACTCTCTCTTCATTTTGGTAGAGAGTT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTTGGGCATCGCCAGTTaGAACAGTAACTCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSLGIAS*NSNSLE Trigger: TTCAAGAGAGTTACTGTTCCAACTGGCGATGCCCAA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTTAAATTCACATTTCTaGGCCCATCATAGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSLNSHF*AHHSAS Trigger: GGATGCACTATGATGGGCTCAGAAATGTGAATTTAA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTACCAATCTGGAAAGCTaGAGAATAATGATGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSTNLES*RIMMFL Trigger: GAGGAACATCATTATTCTGCAGCTTTCCAGATTGGT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCAAGTCAAAGCCGCATaGTATCAATCACTACTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSQVKAA*YQSLLT Trigger: TGTAAGTAGTGATTGATAGCATGCGGCTTTGACTTG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCGTAATGATTTGTATTaGAAGTCAAAGCCGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSRNDLY*KSKPHA Trigger: AGCATGCGGCTTTGACTTGCAATACAAATCATTACG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTAACAGGCCTACAAAATaGTCGATCTTGGTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSNRPTK*SILVIV Trigger: AACTATAACCAAGATCGATCATTTTGTAGGCCTGTT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTCAAGAATCCATCTATaGTGCAGGTATTTTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSSRIHL*CRYFSV Trigger: GACTGAAAAATACCTGCACCATAGATGGATTCTTGA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTATCAAGTTTCCATGTaGAATTTCTTGGGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSYQVSM*NFLGRI Trigger: AATCCTCCCCAAGAAATTCCACATGGAAACTTGATA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTAGAATCCATCTATGGTaGAGGTATTTTTCAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSRIHLW*RYFSVL Trigger: TAAGACTGAAAAATACCTGCACCATAGATGGATTCT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR GCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTACTTCAGATTTGTATTaGTGTTTTTCCATCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSTSDLY*CFSILS Trigger: GGACAAGATGGAAAAACAGCAATACAAATCTGAAGT...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTATTTCAACATAGAGTaGTGTACAGGATACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSYFNIE*CTGYCF Trigger: AAAGCAGTATCCTGTACACCACTCTATGTTGAAATA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CCA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCACACAGTTCAATCTTaGAACAGAATAACTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIASPTLVNIQLPNIVYSHTVQS*NRITHS Trigger: TGAATGAGTTATTCTGTTCCAAGATTGAACTGTGTG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS GCA 90 bp | CTTCAAACAGTGTCTTCATCCTCCCTGGGGACCGAAAACTGCCGGTaGCGCCGCACCCGTCGCCGCCGCCGCCTGCTCATGGAGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQTVSSSSLGTENCR*RRTRRRRRLLMESP Trigger: CGGGCTCTCCATGAGCAGGCGGCGGCGGCGACGGGTGCGGCGGCACCGGCAGTTTTCGGTCCCCAGGGAGGATGAAGACACTGTTTGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325192.8 ENST00000557112.1 |
||
| CDS-3UTR CAA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTCCTCCTGCACTCGAGTaGGGCATCGCCAGTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIASPTLVNIQLPNIVYSPPALE*GIASWN Trigger: GTTCCAACTGGCGATGCCCAACTCGAGTGCAGGAGG...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CAA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTGTACAGGATACTGCTTaGCGGCCAGCTTTGATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SIASPTLVNIQLPNIVYSVQDTA*RPALIV Trigger: TACTATCAAAGCTGGCCGCAAAGCAGTATCCTGTAC...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CAA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTGCTGTTTTTCCATCTaGTCCCAAATCCAAAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SIASPTLVNIQLPNIVYSCCFSI*SQIQSS Trigger: GCTACTTTGGATTTGGGACAAGATGGAAAAACAGCA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CAA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTGGAACAGTAACTCTCTaGAATGGTAGACATGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SIASPTLVNIQLPNIVYSGTVTL*NGRHEI Trigger: AATCTCATGTCTACCATTCAAGAGAGTTACTGTTCC...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CAA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTGACTTCAGATTTGTATaGCTGTTTTTCCATCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SIASPTLVNIQLPNIVYSDFRFV*LFFHLV Trigger: GACAAGATGGAAAAACAGCAATACAAATCTGAAGTC...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS-3UTR CAA 90 bp | TCTATTGCTAGTCCGACACTAGTAAACATCCAGTTGCCTAATATTGTTTATAGTTCACACAGTTCAATCTaGGAACAGAATAACTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SIASPTLVNIQLPNIVYSSHSSI*EQNNSF Trigger: GAATGAGTTATTCTGTTCCAAGATTGAACTGTGTGA...ACTATAAACAATATTAGGCAACTGGATGTTTACTAGTGTCGGACTAGCAATAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS TCA 72 bp | CTGCCGCCGCCGCCGCCGCCGCCGCTGCCTCATCTATaGGTACCGCCGGCTGTCTCGGCCTCCCCCGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPPPPPPPLPHL*VPPAVSASPGV Trigger: CACGCCGGGGGAGGCCGAGACAGCCGGCGGTACTCATAGATGAGGCAGCGGCGGCGGCGGCGGCGGCGGCAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000325192.8 ENST00000557112.1 |
||
| CDS CCA 72 bp | GCTGTCTCGGCCTCCCCCGGCGTGAGTTCTGGGCTCTaGCATGGCCTCCATGGCAGCCGCCGCGGCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVSASPGVSSGL*HGLHGSRRGGS Trigger: GCTCCCGCCGCGGCGGCTGCCATGGAGGCCATGCCAGAGCCCAGAACTCACGCCGGGGGAGGCCGAGACAGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000325192.8 ENST00000557112.1 |
||
| CDS CCA 72 bp | AGCCACAGCAGCTCCAGCGCCCAGGCCCAATCTCACTaGACCCACGGAGCCAGGACAGTGGGACACGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHSSSSAQAQSH*THGARTVGHVA Trigger: AGCGACGTGTCCCACTGTCCTGGCTCCGTGGGTCCAGTGAGATTGGGCCTGGGCGCTGGAGCTGCTGTGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325192.8 |
||
| CDS CCA 72 bp | TGCTTTGATCTCTTCAAACAGTGTCTTCATCCTCCCTaGGGACCGAAAACTGCCGGTGCCGCCGCACCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: CFDLFKQCLHPP*GPKTAGAAAPV Trigger: GACGGGTGCGGCGGCACCGGCAGTTTTCGGTCCCCAGGGAGGATGAAGACACTGTTTGAAGAGATCAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325192.8 ENST00000557112.1 |
||
| CDS TCA 72 bp | CTTAAGCCACCACACTTTATATTAATTGTGCGCTGCTaGTCCTCCTGCACTCGAGTTGGGCATCGCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LKPPHFILIVRC*SSCTRVGHRQL Trigger: CAACTGGCGATGCCCAACTCGAGTGCAGGAGGATCAGCAGCGCACAATTAATATAAAGTGTGGTGGCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557112.1 |
||
| CDS TCA 72 bp | ATTTCTTGGGGAGGATTTATATTAATTGTGCGCTGCTaGTCCTCCTGCACTCGAGTTGGGCATCGCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISWGGFILIVRC*SSCTRVGHRQL Trigger: CAACTGGCGATGCCCAACTCGAGTGCAGGAGGATCAGCAGCGCACAATTAATATAAATCCTCCCCAAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000325192.8 ENST00000553841.1 ENST00000555826.5 |
||
| CDS CCA 72 bp | ATTAATTGTGCGCTGCTGATCCTCCTGCACTCGAGTTaGGCATCGCCAGTTGGAACAGTAACTCTCTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: INCALLILLHSS*ASPVGTVTLLN Trigger: ATTCAAGAGAGTTACTGTTCCAACTGGCGATGCCCAACTCGAGTGCAGGAGGATCAGCAGCGCACAATTAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000325192.8 ENST00000553841.1 ENST00000555826.5 ENST00000557112.1 |
||
| CDS CCA 72 bp | AGCCACCACACCCATGCTCTTCACACAGTTCAATCTTaGAACAGAATAACTCATTCACAGCCAGTCTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: SHHTHALHTVQS*NRITHSQPVLS Trigger: TGATAAGACTGGCTGTGAATGAGTTATTCTGTTCCAAGATTGAACTGTGTGAAGAGCATGGGTGTGGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325192.8 ENST00000555826.5 |
||
| CDS CAA 90 bp | AATTCTCTTAAGCCACCACACCCATGCTCTTCACACAGTTCAATCTaGGAACAGAATAACTCATTCACAGCCAGTCTTATCAAGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NSLKPPHPCSSHSSI*EQNNSFTASLIKFP Trigger: TGGAAACTTGATAAGACTGGCTGTGAATGAGTTATTCTGTTCCAAGATTGAACTGTGTGAAGAGCATGGGTGTGGTGGCTTAAGAGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325192.8 ENST00000555826.5 |
||
| CDS TCA 72 bp | TCCACACACCTACCCACTATGTGCACTGCTAGTAACTaGCTCTCTGTAATAAATTCTGATTCTATTCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: STHLPTMCTASN*LSVINSDSIQN Trigger: ATTCTGAATAGAATCAGAATTTATTACAGAGAGTCAGTTACTAGCAGTGCACATAGTGGGTAGGTGTGTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555826.5 |
||
| CDS CAA 90 bp | TTAACCAAGGTTTTATTGTACCCATGCTCTTCACACAGTTCAATCTaGGAACAGAATAACTCATTCACAGCCAGTCTTATCAAGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTKVLLYPCSSHSSI*EQNNSFTASLIKFP Trigger: TGGAAACTTGATAAGACTGGCTGTGAATGAGTTATTCTGTTCCAAGATTGAACTGTGTGAAGAGCATGGGTACAATAAAACCTTGGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553841.1 |
||
| CDS CCA 72 bp | TTTTATTGTACCCATGCTCTTCACACAGTTCAATCTTaGAACAGAATAACTCATTCACAGCCAGTCTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: FYCTHALHTVQS*NRITHSQPVLS Trigger: TGATAAGACTGGCTGTGAATGAGTTATTCTGTTCCAAGATTGAACTGTGTGAAGAGCATGGGTACAATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553841.1 |
||