Pregenerated sensors for C14ORF178 (Homo sapiens)
Ensembl gene IDs: ENSG00000197734Ensembl transcript IDs: ENST00000556047.1, ENST00000557011.5, ENST00000650032.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTGGGACCCCATCTCTGGTTGATCATGCCAGGTGGGTTGTTGATTaGGGTCCTCGATACGGAAGGGTCTGGGAGTACCAGTCTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SGTPSLVDHARWVVD*GPRYGRVWEYQSSS Trigger: TGAAGAAGACTGGTACTCCCAGACCCTTCCGTATCGAGGACCCCAATCAACAACCCACCTGGCATGATCAACCAGAGATGGGGTCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650032.1 |
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| CDS CCA 90 bp | GGTCTGTCTGACTCCAGATGTCTTAGAAAGGTAGAATCTTTCACTTaGAAGACAGTATGGTTAAGATCATGTTCTCCGGGCCGGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: GLSDSRCLRKVESFT*KTVWLRSCSPGRAQ Trigger: CTGTGCCCGGCCCGGAGAACATGATCTTAACCATACTGTCTTCCAAGTGAAAGATTCTACCTTTCTAAGACATCTGGAGTCAGACAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000556047.1 ENST00000557011.5 ENST00000650032.1 |
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| CDS CAA 72 bp | GGACCCCATCTCTGGTTGATCATGCCAGGTGGGTTGTaGATTGGGGTCCTCGATACGGAAGGGTCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GPHLWLIMPGGL*IGVLDTEGSGS Trigger: ACTCCCAGACCCTTCCGTATCGAGGACCCCAATCAACAACCCACCTGGCATGATCAACCAGAGATGGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650032.1 |
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| CDS CCA 72 bp | CTGTACCTGGTTGATCATGCCAGGTGGGTTGTTGATTaGGGTCCTCGATACGGAAGGGTCTGGGAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: LYLVDHARWVVD*GPRYGRVWEYQ Trigger: CTGGTACTCCCAGACCCTTCCGTATCGAGGACCCCAATCAACAACCCACCTGGCATGATCAACCAGGTACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556047.1 |
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| CDS CCA 72 bp | CCATCTCTGGTTGATCATGCCAGGTGGGTTGTTGATTaGGGTCCTCGATACGGAAGGGTCTGGGAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: PSLVDHARWVVD*GPRYGRVWEYQ Trigger: CTGGTACTCCCAGACCCTTCCGTATCGAGGACCCCAATCAACAACCCACCTGGCATGATCAACCAGAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650032.1 |
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| CDS CCA 72 bp | AAAATAGTGGGACCCCATCTCAGGTGGGTTGTTGATTaGGGTCCTCGATACGGAAGGGTCTGGGAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: KIVGPHLRWVVD*GPRYGRVWEYQ Trigger: CTGGTACTCCCAGACCCTTCCGTATCGAGGACCCCAATCAACAACCCACCTGAGATGGGGTCCCACTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557011.5 |
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| CDS CCA 72 bp | AATAGTGGGACCCCATCTCTGGTTGATCATGCCAGGTaGGTTGTTGATTGGGGTCCTCGATACGGAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: NSGTPSLVDHAR*VVDWGPRYGRV Trigger: GACCCTTCCGTATCGAGGACCCCAATCAACAACCCACCTGGCATGATCAACCAGAGATGGGGTCCCACTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650032.1 |
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| CDS CAA 72 bp | ACTGAAGGTTCAGTAAAGTGGGGAGGAAGGCACGACTaGAACTCAGGTCTGTCTGACTCCAGATGTCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: TEGSVKWGGRHD*NSGLSDSRCLR Trigger: TCTAAGACATCTGGAGTCAGACAGACCTGAGTTCAAGTCGTGCCTTCCTCCCCACTTTACTGAACCTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556047.1 ENST00000557011.5 ENST00000650032.1 |
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| CDS CAA 90 bp | GAAAGACTCACTGAAGGTTCAGTAAAGTGGGGAGGAAGGCACGACTaGAACTCAGGTCTGTCTGACTCCAGATGTCTTAGAAAGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: ERLTEGSVKWGGRHD*NSGLSDSRCLRKVE Trigger: TTCTACCTTTCTAAGACATCTGGAGTCAGACAGACCTGAGTTCAAGTCGTGCCTTCCTCCCCACTTTACTGAACCTTCAGTGAGTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556047.1 ENST00000557011.5 ENST00000650032.1 |
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