RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C13ORF46 (Homo sapiens)

Ensembl gene IDs: ENSG00000283199, ENSG00000283302

Ensembl transcript IDs: ENST00000636000.3, ENST00000636427.3, ENST00000636765.1, ENST00000637024.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCGGCGGTGACGAGGAGCATCCGGCGGAGATGAGGAGCATCCGGTaGAGAGGAGGAGCATCTCGAGGAGCGGAGGAGCATCTGGCGGAG +
Preference number: 1 (lower is better)
Translates to: SGGDEEHPAEMRSIR*RGGASRGAEEHLAE
Trigger: CTCCGCCAGATGCTCCTCCGCTCCTCGAGATGCTCCTCCTCTCCACCGGATGCTCCTCATCTCCGCCGGATGCTCCTCGTCACCGCCGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp CAGTCACAGCCGGGGCTCAGCTGCGTCCACCGTGCTCCTGGCTCCTaGAGGGACTTTGGTGACACAGCAGATGCTCCATCCCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: QSQPGLSCVHRAPGS*RDFGDTADAPSLPC
Trigger: GCAGGGCAGGGATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTGAGCCCCGGCTGTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp TGTGGGGGAGGGTGCTGGGAGCCACCCGGCAGAGCTGCCGCCTCCTaGCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: CGGGCWEPPGRAAAS*PTKGTNQPYFRKLL
Trigger: GAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAGGAGGCGGCAGCTCTGCCGGGTGGCTCCCAGCACCCTCCCCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp GCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTaGGTCCACCGTGCTCCTGGCTCCTGCAGGGACTTTGGTGACACA +
Preference number: 1 (lower is better)
Translates to: APQSLLLSQSQPGLS*VHRAPGSCRDFGDT
Trigger: TGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp CATCACTCACCCAGTGGGCAGTGGGTTTCAGGCGTGGCTCACACCTaGTGTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGAT +
Preference number: 1 (lower is better)
Translates to: HHSPSGQWVSGVAHT*CGHRHPSVAQSWRD
Trigger: ATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGAGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR TCA 90 bp GTGGCATGCGGCTCCCTGAAAAGGGCCCCTCCCTCCCTGGCTGAGTaGTGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTATCATGTG +
Preference number: 1 (lower is better)
Translates to: VACGSLKRAPPSLAE*WAELTLWEPLHYHV
Trigger: CACATGATAATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAGGGGCCCTTTTCAGGGAGCCGCATGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp TTCAGGCGTGGCTCACACCTGGTGTGGTCATCGGCACCCCAGCGTTaGTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGC +
Preference number: 1 (lower is better)
Translates to: FRRGSHLVWSSAPQR*SELAGSLAQRRSLC
Trigger: GCACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp CCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTaGATTATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCAC +
Preference number: 1 (lower is better)
Translates to: PPWLSDGQSSPSGSL*IIMCTTGTAPMCLH
Trigger: GTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGATAATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp CTCACCCAGTGGGCAGTGGGTTTCAGGCGTGGCTCACACCTGGTGTaGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTA +
Preference number: 1 (lower is better)
Translates to: LTQWAVGFRRGSHLV*SSAPQRCSELAGSL
Trigger: TAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp CACAAGAAGAAAACAGAAACCTCAGTGCCTGGCAGAGAAGGCTCTTaGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: HKKKTETSVPGREGS*AASRWPDRPPSRLL
Trigger: CAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGAGCCTTCTCTGCCAGGCACTGAGGTTTCTGTTTTCTTCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp GAAGGTCACGTCATCACTCACCCAGTGGGCAGTGGGTTTCAGGCGTaGCTCACACCTGGTGTGGTCATCGGCACCCCAGCGTTGCTCAGA +
Preference number: 1 (lower is better)
Translates to: EGHVITHPVGSGFQA*LTPGVVIGTPALLR
Trigger: TCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGACGTGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp TGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTaGACACAGCATCTCCGCCTGTGGCCTCTGACTGCCTTAGAGACA +
Preference number: 1 (lower is better)
Translates to: CTTGTAPMCLHGNRQ*TQHLRLWPLTALET
Trigger: TGTCTCTAAGGCAGTCAGAGGCCACAGGCGGAGATGCTGTGTGCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp TCTGGTGGAGAGGAGGAGCATCTGGTGGAGAGGAGGAGCATCTGGTaGAGAGGAGGAGCATCTGGTGGAGAGGAGGAGCATCTTCCCGTG +
Preference number: 1 (lower is better)
Translates to: SGGEEEHLVERRSIW*RGGASGGEEEHLPV
Trigger: CACGGGAAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp CGTATTTCCGGAAGCTTCTCTGGGTGCCTTTCTGGTTGGCACAGTTaGAGGCCGCAACTGAGTCACACCCAACTGCCCGGCAGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: RISGSFSGCLSGWHS*RPQLSHTQLPGSLS
Trigger: GGACAGGCTGCCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp AGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTATCATGTaGACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAG +
Preference number: 1 (lower is better)
Translates to: SDGQSSPSGSLCIIM*TTGTAPMCLHGNRQ
Trigger: CTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGATAATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp CAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTTTCTGGTTaGCACAGTTGGAGGCCGCAACTGAGTCACACCCAACTGCCCGGC +
Preference number: 1 (lower is better)
Translates to: QTNRISGSFSGCLSG*HSWRPQLSHTQLPG
Trigger: GCCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp CTGACTGCCTTAGAGACACCCGGATCAGAGATGCTGCAGGTCACCTaGCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCATGTA +
Preference number: 1 (lower is better)
Translates to: LTALETPGSEMLQVT*PCPPVHMCGMYEHV
Trigger: TACATGCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTGTCTCTAAGGCAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp CCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTaGCTTTCTGGTTGGCACAGTTGGAGGCCGCAACTGAGTCACACC +
Preference number: 1 (lower is better)
Translates to: PPRGQTNRISGSFSG*LSGWHSWRPQLSHT
Trigger: GGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp ATGTGTCTCCACGGGAATAGACAGTGCACACAGCATCTCCGCCTGTaGCCTCTGACTGCCTTAGAGACACCCGGATCAGAGATGCTGCAG +
Preference number: 1 (lower is better)
Translates to: MCLHGNRQCTQHLRL*PLTALETPGSEMLQ
Trigger: CTGCAGCATCTCTGATCCGGGTGTCTCTAAGGCAGTCAGAGGCCACAGGCGGAGATGCTGTGTGCACTGTCTATTCCCGTGGAGACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp GGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTTTCTaGTTGGCACAGTTGGAGGCCGCAACTGAGTCACACCCAACTGCC +
Preference number: 1 (lower is better)
Translates to: GTNQPYFRKLLWVPF*LAQLEAATESHPTA
Trigger: GGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp TGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTaGGTGCCTTTCTGGTTGGCACAGTTGGAGGCCGCAACTGAGTCA +
Preference number: 1 (lower is better)
Translates to: CPTKGTNQPYFRKLL*VPFWLAQLEAATES
Trigger: TGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 90 bp CACCCGGATCAGAGATGCTGCAGGTCACCTGCCCGTGCCCTCCTGTaGACATGTGTGGTATGTACGAGCATGTATGTGCTGTGTACATAT +
Preference number: 1 (lower is better)
Translates to: HPDQRCCRSPARALL*TCVVCTSMYVLCTY
Trigger: ATATGTACACAGCACATACATGCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp GCATCTGGTGGAGAGGAGGAGCATCTGGTGGAGAGGAGGAGCATCTaGTGGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTTG +
Preference number: 1 (lower is better)
Translates to: ASGGEEEHLVERRSI*WRGGASSRACLLCL
Trigger: CAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR TCA 90 bp GGTGGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTTGTTaGAGGTCACGTCATCACTCACCCAGTGGGCAGTGGGTTTCAGGC +
Preference number: 1 (lower is better)
Translates to: GGEEEHLPVLVYCVC*RSRHHSPSGQWVSG
Trigger: GCCTGAAACCCACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp GCTTGTTTATTGTGTTTGTTGAAGGTCACGTCATCACTCACCCAGTaGGCAGTGGGTTTCAGGCGTGGCTCACACCTGGTGTGGTCATCG +
Preference number: 1 (lower is better)
Translates to: ACLLCLLKVTSSLTQ*AVGFRRGSHLVWSS
Trigger: CGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 90 bp TCTGGTGGAGAGGAGGAGCATCTGGTGGAGAGGAGGAGCATCTGGTaGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTTGTTG +
Preference number: 1 (lower is better)
Translates to: SGGEEEHLVERRSIW*RGGASSRACLLCLL
Trigger: CAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp CGGGGCTCAGCTGCGTCCACCGTGCTCCTGGCTCCTGCAGGGACTTaGGTGACACAGCAGATGCTCCATCCCTGCCCTGCACCTCTCACT +
Preference number: 2 (lower is better)
Translates to: RGSAASTVLLAPAGT*VTQQMLHPCPAPLT
Trigger: AGTGAGAGGTGCAGGGCAGGGATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTGAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCGGTGCTTCCAGGAGCTaGAGCTCACACGAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVGASRS*SSHEAH
Trigger: GTGGGCCTCGTGTGAGCTGCAGCTCCTGGAAGCACC...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCTGGGCGGCAAGTAGGTaGCCGGATCGCCCTCCGTCC +
Preference number: 2 (lower is better)
Translates to: CCRSPARALLCTCVVCTSWAASR*PDRPPS
Trigger: GGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCA...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp GCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTaGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCACCGTGCT +
Preference number: 2 (lower is better)
Translates to: ASLQGQILVPAPQSL*LSQSQPGLSCVHRA
Trigger: AGCACGGTGGACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCAGGCCCACAAAGGGCTaGGCCTCCCCTGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCRPTKG*ASPAVP
Trigger: GGGCACAGCAGGGGAGGCTCAGCCCTTTGTGGGCCT...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCAGCTGCGTCCACCGTaGTCCTGGCTCCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: CCRSPARALLCTCVVCTSQLRPP*SWLLQG
Trigger: TCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTGGCGTGGCTCACACCTaGTGTGGTCATCGGCACCCC +
Preference number: 2 (lower is better)
Translates to: GEHVASLQGQILVPAPQSGVAHT*CGHRHP
Trigger: GGGGTGCCGATGACCACACCAGGTGTGAGCCACGCC...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCTGGAGTCCTCCAGCTaGTGGAGACGAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVLESSS*WRRGAA
Trigger: AGCTGCTCCTCGTCTCCACCAGCTGGAGGACTCCAG...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTAGGGCAGGAAGGGGCTaGAGTCCTCCAGCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIRAGRG*SPPAGG
Trigger: TCCACCAGCTGGAGGACTCCAGCCCCTTCCTGCCCT...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTCACCCGGATCAGAGATaGTGCAGGTCACCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIHPDQR*CRSPAR
Trigger: ACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTG...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGGCGTGGCTCACACCTaGTGTGGTCATCGGCACCCC +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAGVAHT*CGHRHP
Trigger: GGGGTGCCGATGACCACACCAGGTGTGAGCCACGCC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTTCACCCAGTGGGCAGTaGGTTTCAGGCGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCISPSGQ*VSGVAH
Trigger: GTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGA...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCCTCTCACTCCTGCCTaGTGGGGGTGCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: CCRSPARALLCTCVVCTSPLTPA*WGCFQE
Trigger: CTCCTGGAAGCACCCCCACCAGGCAGGAGTGAGAGG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp TTTCAGGCGTGGCTCACACCTGGTGTGGTCATCGGCACCCCAGCGTaGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: FQAWLTPGVVIGTPA*LRAGGIFSPKAQSV
Trigger: CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTGCCCGTGCCCTCCTGTaGACATGTGTGGTATGTACG +
Preference number: 2 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIARALL*TCVVCT
Trigger: CGTACATACCACACATGTGCACAGGAGGGCACGGGC...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGGCAGAGAAGGCTCTTaGGCGGCAAGTAGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAGREGS*AASRWP
Trigger: CGGCCACCTACTTGCCGCCCAAGAGCCTTCTCTGCC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGGCTCACACCTGGTGTaGTCATCGGCACCCCAGCGT +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAGSHLV*SSAPQR
Trigger: ACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCGGCTCACACCTGGTGTaGTCATCGGCACCCCAGCGT +
Preference number: 2 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCGSHLV*SSAPQR
Trigger: ACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCC...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp CCGTATTTCCGGAAGCTTCTCTGGGTGCCTTTCTGGTTGGCACAGTaGGAGGCCGCAACTGAGTCACACCCAACTGCCCGGCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: PYFRKLLWVPFWLAQ*EAATESHPTARQPV
Trigger: GACAGGCTGCCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCAAAGGCGCAGTCTGTaGTCTCGCTCCTTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCQRRSL*SRSFQA
Trigger: GGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGGGCAGAGAAGGCTCTTaGGCGGCAAGTAGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWGREGS*AASRWP
Trigger: CGGCCACCTACTTGCCGCCCAAGAGCCTTCTCTGCC...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTCACCCAGTGGGCAGTaGGTTTCAGGCGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGASPSGQ*VSGVAH
Trigger: GTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCACCACAGTCTCTGTTaGTCTCGCAGTCACAGCCGG +
Preference number: 2 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCHHSLC*SRSHSR
Trigger: CCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCCTGTGGCCTCTGACTaGCTTAGAGACACCCGGATC +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAPVASD*LRDTRI
Trigger: GATCCGGGTGTCTCTAAGGCAGTCAGAGGCCACAGG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCAGAAACCTCAGTGCCTaGCAGAGAAGGCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVRNLSA*QRRLLG
Trigger: GCCCAAGAGCCTTCTCTGCCAGGCACTGAGGTTTCT...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCAGTGGGTTTCAGGCGTaGCTCACACCTGGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGASGFQA*LTPGVV
Trigger: GACCACACCAGGTGTGAGCCACGCCTGAAACCCACT...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACTGGAGTCCTCCAGCTaGTGGAGACGAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSLESSS*WRRGAA
Trigger: AGCTGCTCCTCGTCTCCACCAGCTGGAGGACTCCAG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR TCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCTGCAGGGACTTTGGTaGCACAGCAGATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGALQGLW*HSRCSI
Trigger: GATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR TCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTCTGGGTGGATTCTGGTaGAACTCGTCTTACAGGCAT +
Preference number: 2 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCILGGFW*NSSYRH
Trigger: ATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAG...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACGTGCTCCTGGCTCCTaGAGGGACTTTGGTGACACA +
Preference number: 2 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSRAPGS*RDFGDT
Trigger: TGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCACGGGAATAGACAGTaGACACAGCATCTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAHGNRQ*TQHLRL
Trigger: CAGGCGGAGATGCTGTGTGCACTGTCTATTCCCGTG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTCATCACTCACCCAGTaGGCAGTGGGTTTCAGGCGT +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGASSLTQ*AVGFRR
Trigger: ACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp ACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTTTCTGGTaGGCACAGTTGGAGGCCGCAACTGAGTCACACCCAACTGCCCGG +
Preference number: 2 (lower is better)
Translates to: TNQPYFRKLLWVPFW*AQLEAATESHPTAR
Trigger: CCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR TCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACTGCAGGGACTTTGGTaGCACAGCAGATGCTCCATC +
Preference number: 2 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSLQGLW*HSRCSI
Trigger: GATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR TCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGATGGTGCCCCACTTTaGTCAGAGGAAACTACCCAG +
Preference number: 2 (lower is better)
Translates to: LPHQGDKPTVFPEASLGADGAPL*SEETTQ
Trigger: CTGGGTAGTTTCCTCTGATCAAAGTGGGGCACCATC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAAGAAACCTCAGTGCCTaGCAGAGAAGGCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSRNLSA*QRRLLG
Trigger: GCCCAAGAGCCTTCTCTGCCAGGCACTGAGGTTTCT...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCAGGAGCATCTTCCCGTaGTTGTTTATTGTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVRSIFP*LFIVFV
Trigger: AACAAACACAATAAACAAGCACGGGAAGATGCTCCT...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR TCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTGTTTATTGTGTTTGTTaGAGGTCACGTCATCACTCA +
Preference number: 2 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIVYCVC*RSRHHS
Trigger: TGAGTGATGACGTGACCTTCAACAAACACAATAAAC...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp TGGTGGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTTGTaGAAGGTCACGTCATCACTCACCCAGTGGGCAGTGGGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: WWRGGASSRACLLCL*KVTSSLTQWAVGFR
Trigger: CCTGAAACCCACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 90 bp ATCTGGTGGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTaGTTGAAGGTCACGTCATCACTCACCCAGTGGGCAGTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: IWWRGGASSRACLLC*LKVTSSLTQWAVGF
Trigger: GAAACCCACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp GGGTGCTGGGAGCCACCCGGCAGAGCTGCCGCCTCCTaGCCCACCAAGGGGACAAACCAACCGTATTTCCGG +
Preference number: 3 (lower is better)
Translates to: GCWEPPGRAAAS*PTKGTNQPYFR
Trigger: CCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAGGAGGCGGCAGCTCTGCCGGGTGGCTCCCAGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp CCGGGGCTCAGCTGCGTCCACCGTGCTCCTGGCTCCTaGAGGGACTTTGGTGACACAGCAGATGCTCCATCC +
Preference number: 3 (lower is better)
Translates to: PGLSCVHRAPGS*RDFGDTADAPS
Trigger: GGATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTGAGCCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp TGGGCAGTGGGTTTCAGGCGTGGCTCACACCTGGTGTaGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCG +
Preference number: 3 (lower is better)
Translates to: WAVGFRRGSHLV*SSAPQRCSELA
Trigger: CGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp CCCAGTGGGCAGTGGGTTTCAGGCGTGGCTCACACCTaGTGTGGTCATCGGCACCCCAGCGTTGCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: PSGQWVSGVAHT*CGHRHPSVAQS
Trigger: GCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp GGCTCACACCTGGTGTGGTCATCGGCACCCCAGCGTTaGTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGC +
Preference number: 3 (lower is better)
Translates to: GSHLVWSSAPQR*SELAGSLAQRR
Trigger: GCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp GAGGAAACTACCCAGTGGGACAAGCTCTGCGTGGCATaGGGCTCCCTGAAAAGGGCCCCTCCCTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: EETTQWDKLCVA*GSLKRAPPSLA
Trigger: AGCCAGGGAGGGAGGGGCCCTTTTCAGGGAGCCGCATGCCACGCAGAGCTTGTCCCACTGGGTAGTTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp GTCATCACTCACCCAGTGGGCAGTGGGTTTCAGGCGTaGCTCACACCTGGTGTGGTCATCGGCACCCCAGCG +
Preference number: 3 (lower is better)
Translates to: VITHPVGSGFQA*LTPGVVIGTPA
Trigger: CGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR TCA 72 bp GGTGCCTTTCTGGTTGGCACAGTTGGAGGCCGCAACTaGGTCACACCCAACTGCCCGGCAGCCTGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: GAFLVGTVGGRN*VTPNCPAACPG
Trigger: TCCTGGACAGGCTGCCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp GAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTaGTCTCGCTCCTTCCAGGCCTGGCCAGTCCCACAA +
Preference number: 3 (lower is better)
Translates to: ELAGSLAQRRSL*SRSFQAWPVPQ
Trigger: TTGTGGGACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp CAGAGCTCACCCTCTGGGAGCCTCTGCATTATCATGTaGACCACAGGGACGGCCCCCATGTGTCTCCACGGG +
Preference number: 3 (lower is better)
Translates to: QSSPSGSLCIIM*TTGTAPMCLHG
Trigger: CCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGATAATGCAGAGGCTCCCAGAGGGTGAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp CTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTaGATTATCATGTGCACCACAGGGACGGCCCCCATG +
Preference number: 3 (lower is better)
Translates to: LSDGQSSPSGSL*IIMCTTGTAPM
Trigger: CATGGGGGCCGTCCCTGTGGTGCACATGATAATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp GGAAGCTTCTCTGGGTGCCTTTCTGGTTGGCACAGTTaGAGGCCGCAACTGAGTCACACCCAACTGCCCGGC +
Preference number: 3 (lower is better)
Translates to: GSFSGCLSGWHS*RPQLSHTQLPG
Trigger: GCCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CAA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGCACCACAGTCTCTGTaGCTCTCGCAGTCACAGCCG +
Preference number: 3 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAAPQSL*LSQSQP
Trigger: CGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp ACACCCGGATCAGAGATGCTGCAGGTCACCTGCCCGTaGCCTCCTGTGCACATGTGTGGTATGTACGAGCAT +
Preference number: 3 (lower is better)
Translates to: TPGSEMLQVTCP*PPVHMCGMYEH
Trigger: ATGCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp ACAGTGCACACAGCATCTCCGCCTGTGGCCTCTGACTaGCTTAGAGACACCCGGATCAGAGATGCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: TVHTASPPVASD*LRDTRIRDAAG
Trigger: ACCTGCAGCATCTCTGATCCGGGTGTCTCTAAGGCAGTCAGAGGCCACAGGCGGAGATGCTGTGTGCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp CACGGGAATAGACAGTGCACACAGCATCTCCGCCTGTaGCCTCTGACTGCCTTAGAGACACCCGGATCAGAG +
Preference number: 3 (lower is better)
Translates to: HGNRQCTQHLRL*PLTALETPGSE
Trigger: CTCTGATCCGGGTGTCTCTAAGGCAGTCAGAGGCCACAGGCGGAGATGCTGTGTGCACTGTCTATTCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp TTAGAGACACCCGGATCAGAGATGCTGCAGGTCACCTaGCCGTGCCCTCCTGTGCACATGTGTGGTATGTAC +
Preference number: 3 (lower is better)
Translates to: LETPGSEMLQVT*PCPPVHMCGMY
Trigger: GTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTGTCTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp GGAGAGGAGGAGCATCTGGTGGAGAGGAGGAGCATCTaGTGGAGAGGAGGAGCATCTTCCCGTGCTTGTTTA +
Preference number: 3 (lower is better)
Translates to: GEEEHLVERRSI*WRGGASSRACL
Trigger: TAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR GCA 72 bp GGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTaGCTTTCTGGTTGGCACAGTTGGAGGCCGCAACTG +
Preference number: 3 (lower is better)
Translates to: GQTNRISGSFSG*LSGWHSWRPQL
Trigger: CAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp TTGTGTTTGTTGAAGGTCACGTCATCACTCACCCAGTaGGCAGTGGGTTTCAGGCGTGGCTCACACCTGGTG +
Preference number: 3 (lower is better)
Translates to: LCLLKVTSSLTQ*AVGFRRGSHLV
Trigger: CACCAGGTGTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CCA 72 bp GAGGAGGAGCATCTGGTGGAGAGGAGGAGCATCTGGTaGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATTG +
Preference number: 3 (lower is better)
Translates to: EEEHLVERRSIW*RGGASSRACLL
Trigger: CAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTCTCCACCAGATGCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CAA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCTGTTTATTGTGTTTGTaGAAGGTCACGTCATCACTC +
Preference number: 3 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVCLLCL*KVTSSL
Trigger: GAGTGATGACGTGACCTTCAACAAACACAATAAACA...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CAA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTTCCCGTGCTTGTTTATaGTGTTTGTTGAAGGTCACG +
Preference number: 3 (lower is better)
Translates to: GEHVASLQGQILVPAPQSSRACL*CLLKVT
Trigger: CGTGACCTTCAACAAACACAATAAACAAGCACGGGA...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CAA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTGCTTGTTTATTGTGTTaGTTGAAGGTCACGTCATCA +
Preference number: 3 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIACLLC*LKVTSS
Trigger: TGATGACGTGACCTTCAACAAACACAATAAACAAGC...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CAA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCAGCATCTTCCCGTGCTaGTTTATTGTGTTTGTTGAA +
Preference number: 3 (lower is better)
Translates to: CCRSPARALLCTCVVCTSSIFPC*FIVFVE
Trigger: TTCAACAAACACAATAAACAAGCACGGGAAGATGCT...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR TCA 72 bp GAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTTGTTaGAGGTCACGTCATCACTCACCCAGTGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: EEHLPVLVYCVC*RSRHHSPSGQW
Trigger: CCACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR-3UTR CAA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAGCTTGTTTATTGTGTTaGTTGAAGGTCACGTCATCA +
Preference number: 3 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSACLLC*LKVTSS
Trigger: TGATGACGTGACCTTCAACAAACACAATAAACAAGC...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCTGTGGGGGAGGGTGCTaGGAGCCACCCGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPCGGGC*EPPGRA
Trigger: AGCTCTGCCGGGTGGCTCCCAGCACCCTCCCCCACA...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCTTCTTCGCCAAGCTCTaGGCACCCTCTCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPFFAKL*APSPGR
Trigger: GCGCCCCGGAGAGGGTGCTCAGAGCTTGGCGAAGAA...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGGCGTGGCTCACACCTaGTGTGGTCATCGGCACCCC +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPGVAHT*CGHRHP
Trigger: GGGGTGCCGATGACCACACCAGGTGTGAGCCACGCC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGACTCCAGCTCCTTGTaGGGCTTCCTAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPDSSSL*GFLGRL
Trigger: CAGCCGCCCTAGGAAGCCTCACAAGGAGCTGGAGTC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGTTGGAGGCCGCAACTaGGTCACACCCAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPVGGRN*VTPNCP
Trigger: CGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAAC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGGCAGAGAAGGCTCTTaGGCGGCAAGTAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPGREGS*AASRWP
Trigger: CGGCCACCTACTTGCCGCCCAAGAGCCTTCTCTGCC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCAGGGCAGGAAGGGGCTaGAGTCCTCCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPRAGRG*SPPAGG
Trigger: TCCACCAGCTGGAGGACTCCAGCCCCTTCCTGCCCT...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCAGCCGGGGCTCAGCTaGGTCCACCGTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVQPGLS*VHRAPG
Trigger: GCCAGGAGCACGGTGGACGCAGCTGAGCCCCGGCTG...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCCCTTCTTGGCATCGGTaGCCACCTCCTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPPSWHR*PPPQHG
Trigger: ACCATGCTGAGGAGGTGGTCACCGATGCCAAGAAGG...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCAGGCCCACAAAGGGCTaGGCCTCCCCTGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVRPTKG*ASPAVP
Trigger: GGGCACAGCAGGGGAGGCTCAGCCCTTTGTGGGCCT...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTGGGTCCCCCTCGGGCTaGAGGCCTCCCAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIGSPSG*RPPRLL
Trigger: CAGGAGTCTGGGAGGCCTGCAGCCCGAGGGGGACCC...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCCGTGCTCCTGGCTCCTaGAGGGACTTTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPRAPGS*RDFGDT
Trigger: TGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACG...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCTGTGGGGGAGGGTGCTaGGAGCCACCCGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVCGGGC*EPPGRA
Trigger: AGCTCTGCCGGGTGGCTCCCAGCACCCTCCCCCACA...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCTGGCCGCCTTGAGGTaGCCAAGGGCCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVLAALR*PRATPE
Trigger: CTCAGGAGTGGCCCTTGGGCACCTCAAGGCGGCCAG...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCACTCATGCCGATGTTTaGTCTGTGGGGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPTHADV*SVGEGA
Trigger: AGCACCCTCCCCCACAGAGCAAACATCGGCATGAGT...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGAGGCCCACAAAGGGCTaGGCCTCCCCTGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKRPTKG*ASPAVP
Trigger: GGGCACAGCAGGGGAGGCTCAGCCCTTTGTGGGCCT...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCGCACGTGTGCGTGTCTaGACGAGAGGGCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVARVRV*TRGLWV
Trigger: CACCCAGAGCCCTCTCGTTCAGACACGCACACGTGC...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGATGGTGCCCCACTTTaGTCAGAGGAAACTACCCAG +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPDGAPL*SEETTQ
Trigger: CTGGGTAGTTTCCTCTGATCAAAGTGGGGCACCATC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTGAGGCCGGGCCGGTaGCTCCTGTGTGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLRPGR*LLCVVP
Trigger: GGGGACCACACACAGGAGGCACCGGCCCGGCCTCAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGGGTCCCCCTCGGGCTaGAGGCCTCCCAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPGSPSG*RPPRLL
Trigger: CAGGAGTCTGGGAGGCCTGCAGCCCGAGGGGGACCC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCTGCAAGCCTCCGTCTaGGTGCTCGCCTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVLQASV*VLAFLH
Trigger: GTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAG...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCAGCCGGGGCTCAGCTaGGTCCACCGTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAQPGLS*VHRAPG
Trigger: GCCAGGAGCACGGTGGACGCAGCTGAGCCCCGGCTG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCAGAGCTGCCGCCTCCTaGCCCACCAAGGGGACAAAC +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVRAAAS*PTKGTN
Trigger: GTTTGTCCCCTTGGTGGGGCAGGAGGCGGCAGCTCT...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGTGGGCGGCAAGTAGGTaGCCGGATCGCCCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKWAASR*PDRPPS
Trigger: GGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCA...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCGGCAGAGAAGGCTCTTaGGCGGCAAGTAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVGREGS*AASRWP
Trigger: CGGCCACCTACTTGCCGCCCAAGAGCCTTCTCTGCC...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCAGCCCAGCCTCGGCTTaGGCACAAGGCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVSPASA*AQGCHP
Trigger: AGGGTGGCAGCCTTGTGCTCAAGCCGAGGCTGGGCT...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCCTCACTGGCCGCCTTaGGGTGCCCAAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCPHWPP*GAQGPL
Trigger: GAGTGGCCCTTGGGCACCTCAAGGCGGCCAGTGAGG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACTGAGGCCGGGCCGGTaGCTCCTGTGTGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSLRPGR*LLCVVP
Trigger: GGGGACCACACACAGGAGGCACCGGCCCGGCCTCAG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCGCGTGCTCGCCTTCCTaGACCTCCTGCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVACSPS*TSCMLA
Trigger: GGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGC...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGCAGCTGCGTCCACCGTaGTCCTGGCTCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVQLRPP*SWLLQG
Trigger: TCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTG...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTCCGGATCAGAGATGCTaGAGGTCACCTGCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIPDQRC*RSPARA
Trigger: GGCACGGGCAGGTGACCTGCAGCATCTCTGATCCGG...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCGGTGCCTCCTGTGTGTaGTCCCCGTGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVGASCV*SPCPSP
Trigger: TGGAGAAGGACACGGGGACCACACACAGGAGGCACC...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCTTCTTCGCCAAGCTCTaGGCACCCTCTCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCFFAKL*APSPGR
Trigger: GCGCCCCGGAGAGGGTGCTCAGAGCTTGGCGAAGAA...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGCCTCACTGGCCGCCTTaGGGTGCCCAAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWPHWPP*GAQGPL
Trigger: GAGTGGCCCTTGGGCACCTCAAGGCGGCCAGTGAGG...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCGACTCCAGCTCCTTGTaGGGCTTCCTAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVDSSSL*GFLGRL
Trigger: CAGCCGCCCTAGGAAGCCTCACAAGGAGCTGGAGTC...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCGTTGGAGGCCGCAACTaGGTCACACCCAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSVGGRN*VTPNCP
Trigger: CGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAAC...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCCATCTTCCGCGTTACTaGTTGGGTCTTTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPHLPRY*LGLSLD
Trigger: ATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATG...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTGGCCGCCTTGAGGTaGCCAAGGGCCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLAALR*PRATPE
Trigger: CTCAGGAGTGGCCCTTGGGCACCTCAAGGCGGCCAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCGGTGCTTCCAGGAGCTaGAGCTCACACGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVGASRS*SSHEAH
Trigger: GTGGGCCTCGTGTGAGCTGCAGCTCCTGGAAGCACC...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCATGCTGCAGGTCACCTaGCCGTGCCCTCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVMLQVT*PCPPVH
Trigger: GTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCAT...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCCTGTGGCCTCTGACTaGCTTAGAGACACCCGGATC +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVPVASD*LRDTRI
Trigger: GATCCGGGTGTCTCTAAGGCAGTCAGAGGCCACAGG...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGCAGTGGGACAAGCTCTaGGTGGCATGCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVQWDKL*VACGSL
Trigger: CAGGGAGCCGCATGCCACGCAGAGCTTGTCCCACTG...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCAGTGGGACAAGCTCTaGGTGGCATGCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVQWDKL*VACGSL
Trigger: CAGGGAGCCGCATGCCACGCAGAGCTTGTCCCACTG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCATGGGCGGCAAGTAGGTaGCCGGATCGCCCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSWAASR*PDRPPS
Trigger: GGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCA...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTAGGGCAGGAAGGGGCTaGAGTCCTCCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSRAGRG*SPPAGG
Trigger: TCCACCAGCTGGAGGACTCCAGCCCCTTCCTGCCCT...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCCTCTCACTCCTGCCTaGTGGGGGTGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSPLTPA*WGCFQE
Trigger: CTCCTGGAAGCACCCCCACCAGGCAGGAGTGAGAGG...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCCTCTCACTCCTGCCTaGTGGGGGTGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVPLTPA*WGCFQE
Trigger: CTCCTGGAAGCACCCCCACCAGGCAGGAGTGAGAGG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCGGGTGCCTTTCTGGTTaGCACAGTTGGAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVGCLSG*HSWRPQ
Trigger: TTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCC...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp TGGCTCACACCTGGTGTGGTCATCGGCACCCCAGCGTaGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: WLTPGVVIGTPA*LRAGGIFSPKA
Trigger: CGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp CAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTaGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QGQILVPAPQSL*LSQSQPGLSCV
Trigger: GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTCCGGGGCGCTAGGTaGTCTCCTTTGCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLRGAR*SPLPSS
Trigger: GGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCCTCCGGGGCGCTAGGTaGTCTCCTTTGCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPLRGAR*SPLPSS
Trigger: GGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAG...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGCAAAGGCGCAGTCTGTaGTCTCGCTCCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKQRRSL*SRSFQA
Trigger: GGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTG...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTGGCCTCCCAGACTCCTaGTTCGCTGAAGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIGLPDS*FAEVQR
Trigger: CCTCTGAACTTCAGCGAAGCAGGAGTCTGGGAGGCC...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCCTGCACCTCCTGCATaGTGGCCTCCAAGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVPAPPA*WPPSRS
Trigger: AGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCCTGCACCTCCTGCATaGTGGCCTCCAAGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSPAPPA*WPPSRS
Trigger: AGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGG...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGGCGTGCTCGCCTTCCTaGACCTCCTGCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWACSPS*TSCMLA
Trigger: GGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGC...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCAAGCCTCCGTCTGCGTaGTCGCCTTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPKPPSA*SPSCTS
Trigger: GGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTT...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCAAGCCTCCGTCTGCGTaGTCGCCTTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCKPPSA*SPSCTS
Trigger: GGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTT...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCCTGCAAGCCTCCGTCTaGGTGCTCGCCTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPLQASV*VLAFLH
Trigger: GTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAG...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCTGCGTCCACCGTaGTCCTGGCTCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSQLRPP*SWLLQG
Trigger: TCCCTGCAGGAGCCAGGAGCACGGTGGACGCAGCTG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTCACCACAGTCTCTGTTaGTCTCGCAGTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIHHSLC*SRSHSR
Trigger: CCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTG...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCAGGTCACCTGCCCGTaGCCTCCTGTGCACATGTGT +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVQVTCP*PPVHMC
Trigger: ACACATGTGCACAGGAGGGCACGGGCAGGTGACCTG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCAGGTCACCTGCCCGTaGCCTCCTGTGCACATGTGT +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSQVTCP*PPVHMC
Trigger: ACACATGTGCACAGGAGGGCACGGGCAGGTGACCTG...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCCCGGATCAGAGATGCTaGAGGTCACCTGCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPPDQRC*RSPARA
Trigger: GGCACGGGCAGGTGACCTGCAGCATCTCTGATCCGG...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCACCCGGATCAGAGATaGTGCAGGTCACCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVHPDQR*CRSPAR
Trigger: ACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTCCTGTGGCCTCTGACTaGCTTAGAGACACCCGGATC +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIPVASD*LRDTRI
Trigger: GATCCGGGTGTCTCTAAGGCAGTCAGAGGCCACAGG...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCAAGCTCTGCGTGGCATaGGGCTCCCTGAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSKLCVA*GSLKRA
Trigger: GGCCCTTTTCAGGGAGCCGCATGCCACGCAGAGCTT...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCAGAGCTGCCGCCTCCTaGCCCACCAAGGGGACAAAC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPRAAAS*PTKGTN
Trigger: GTTTGTCCCCTTGGTGGGGCAGGAGGCGGCAGCTCT...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGGTGCCTCCTGTGTGTaGTCCCCGTGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKGASCV*SPCPSP
Trigger: TGGAGAAGGACACGGGGACCACACACAGGAGGCACC...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCTGCCTCCTGTTCCTTaGCCTCCTGCAAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVLPPVP*PPASLR
Trigger: ACGGAGGCTTGCAGGAGGCCAAGGAACAGGAGGCAG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGCCTCCTGTTCCTTaGCCTCCTGCAAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSLPPVP*PPASLR
Trigger: ACGGAGGCTTGCAGGAGGCCAAGGAACAGGAGGCAG...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGGCTCACACCTGGTGTaGTCATCGGCACCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPGSHLV*SSAPQR
Trigger: ACGCTGGGGTGCCGATGACCACACCAGGTGTGAGCC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCTGGAGTCCTCCAGCTaGTGGAGACGAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSLESSS*WRRGAA
Trigger: AGCTGCTCCTCGTCTCCACCAGCTGGAGGACTCCAG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCCCGATGTTTGCTCTGTaGGGGAGGGTGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPPMFAL*GRVLGA
Trigger: GGCTCCCAGCACCCTCCCCCACAGAGCAAACATCGG...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp CGGAAGCTTCTCTGGGTGCCTTTCTGGTTGGCACAGTaGGAGGCCGCAACTGAGTCACACCCAACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RKLLWVPFWLAQ*EAATESHPTAR
Trigger: CCGGGCAGTTGGGTGTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAGAAGCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCCTTCTTGGCATCGGTaGCCACCTCCTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVPSWHR*PPPQHG
Trigger: ACCATGCTGAGGAGGTGGTCACCGATGCCAAGAAGG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCTGGTGGAGTACGGGATaGAGCACACCCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSWWSTG*STPSWS
Trigger: AGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCA...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGCGTGCTCCTGGCTCCTaGAGGGACTTTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKRAPGS*RDFGDT
Trigger: TGTGTCACCAAAGTCCCTGCAGGAGCCAGGAGCACG...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCACCACAGTCTCTGTTaGTCTCGCAGTCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSHHSLC*SRSHSR
Trigger: CCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCGCCCGTGCCCTCCTGTaGACATGTGTGGTATGTACG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVARALL*TCVVCT
Trigger: CGTACATACCACACATGTGCACAGGAGGGCACGGGC...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGATGCTGCAGGTCACCTaGCCGTGCCCTCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWMLQVT*PCPPVH
Trigger: GTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCAT...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCCTTTGCCCTCTTCCTaGTGGAGTACGGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSPLPSS*WSTGCS
Trigger: GCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGCCTTTGCCCTCTTCCTaGTGGAGTACGGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKPLPSS*WSTGCS
Trigger: GCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGG...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCTCACCCAGTGGGCAGTaGGTTTCAGGCGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCSPSGQ*VSGVAH
Trigger: GTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGA...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCTCACCCAGTGGGCAGTaGGTTTCAGGCGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPSPSGQ*VSGVAH
Trigger: GTGAGCCACGCCTGAAACCCACTGCCCACTGGGTGA...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCAGCATCTCCGCCTGTaGCCTCTGACTGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVQHLRL*PLTALE
Trigger: CTCTAAGGCAGTCAGAGGCCACAGGCGGAGATGCTG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCTCTCTGCAGCCTGGATaGTGCCCCACTTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVSLQPG*CPTLIR
Trigger: TCTGATCAAAGTGGGGCACCATCCAGGCTGCAGAGA...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCGGTGGGTGCTGGCTTTaGGGGGTCCCCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCGGCWL*GVPFLS
Trigger: AGAGAGAAAGGGGACCCCCCAAAGCCAGCACCCACC...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGCTCTGGGTGCCTTTCTaGTTGGCACAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVLWVPF*LAQLEA
Trigger: GGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAG...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACCGATGTTTGCTCTGTaGGGGAGGGTGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSPMFAL*GRVLGA
Trigger: GGCTCCCAGCACCCTCCCCCACAGAGCAAACATCGG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCAGACTCCTGCTTCGCTaGAGTTCAGAGGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSRLLLR*SSEASL
Trigger: CAGTGAGGCCTCTGAACTTCAGCGAAGCAGGAGTCT...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGCAGGGACTTTGGTaGCACAGCAGATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSLQGLW*HSRCSI
Trigger: GATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAG...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCAGGAGCATCTTCCCGTaGTTGTTTATTGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPRSIFP*LFIVFV
Trigger: AACAAACACAATAAACAAGCACGGGAAGATGCTCCT...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGCACCCGGATCAGAGATaGTGCAGGTCACCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWHPDQR*CRSPAR
Trigger: ACGGGCAGGTGACCTGCAGCATCTCTGATCCGGGTG...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCACGGGAATAGACAGTaGACACAGCATCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVHGNRQ*TQHLRL
Trigger: CAGGCGGAGATGCTGTGTGCACTGTCTATTCCCGTG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTCTGCATTATCATGTaGACCACAGGGACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLCIIM*TTGTAP
Trigger: GGGGGCCGTCCCTGTGGTGCACATGATAATGCAGAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCCTCTGCATTATCATGTaGACCACAGGGACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPLCIIM*TTGTAP
Trigger: GGGGGCCGTCCCTGTGGTGCACATGATAATGCAGAG...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAAAGCTCTGCGTGGCATaGGGCTCCCTGAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSKLCVA*GSLKRA
Trigger: GGCCCTTTTCAGGGAGCCGCATGCCACGCAGAGCTT...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGCTGCAGCCTGGATGGTaGCCCACTTTGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVLQPGW*PTLIRG
Trigger: TCCTCTGATCAAAGTGGGGCACCATCCAGGCTGCAG...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCTGCAGCCTGGATGGTaGCCCACTTTGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSLQPGW*PTLIRG
Trigger: TCCTCTGATCAAAGTGGGGCACCATCCAGGCTGCAG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTAGAAACCTCAGTGCCTaGCAGAGAAGGCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSRNLSA*QRRLLG
Trigger: GCCCAAGAGCCTTCTCTGCCAGGCACTGAGGTTTCT...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCAGTGGGTTTCAGGCGTaGCTCACACCTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCSGFQA*LTPGVV
Trigger: GACCACACCAGGTGTGAGCCACGCCTGAAACCCACT...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCAGTGGGTTTCAGGCGTaGCTCACACCTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPSGFQA*LTPGVV
Trigger: GACCACACCAGGTGTGAGCCACGCCTGAAACCCACT...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGTCATCACTCACCCAGTaGGCAGTGGGTTTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVSSLTQ*AVGFRR
Trigger: ACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGA...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCAGCATCTCCGCCTGTaGCCTCTGACTGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAQHLRL*PLTALE
Trigger: CTCTAAGGCAGTCAGAGGCCACAGGCGGAGATGCTG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGAGGAAACTACCCAGTaGGACAAGCTCTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKEETTQ*DKLCVA
Trigger: TGCCACGCAGAGCTTGTCCCACTGGGTAGTTTCCTC...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCGAGGAAACTACCCAGTaGGACAAGCTCTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSEETTQ*DKLCVA
Trigger: TGCCACGCAGAGCTTGTCCCACTGGGTAGTTTCCTC...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGTCTGGTTGGCACAGTTaGAGGCCGCAACTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVSGWHS*RPQLSH
Trigger: GTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGA...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGGGTGCCTTTCTGGTTaGCACAGTTGGAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPGCLSG*HSWRPQ
Trigger: TTGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCTCTGGGTGCCTTTCTaGTTGGCACAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGALWVPF*LAQLEA
Trigger: GGCCTCCAACTGTGCCAACCAGAAAGGCACCCAGAG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTTGGGTCTTTCCCTTaGTCTTCGGACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLGSFP*SSDSSS
Trigger: GGAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGGGCCTCCCAGACTCCTaGTTCGCTGAAGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWGLPDS*FAEVQR
Trigger: CCTCTGAACTTCAGCGAAGCAGGAGTCTGGGAGGCC...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAGCCCGTGCCCTCCTGTaGACATGTGTGGTATGTACG +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSARALL*TCVVCT
Trigger: CGTACATACCACACATGTGCACAGGAGGGCACGGGC...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGCCCTCTGGGAGCCTCTaGATTATCATGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVPSGSL*IIMCTT
Trigger: TGTGGTGCACATGATAATGCAGAGGCTCCCAGAGGG...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTTCTTCCACATCCATCTaGGACGGCTTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCISSTSI*DGFSSF
Trigger: GAAGGAAGAGAAGCCGTCCCAGATGGATGTGGAAGA...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTGCAGCACACCCAGCTaGTCTGCATCTCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGACSTPS*SASRLL
Trigger: CAGAAGACGAGATGCAGACCAGCTGGGTGTGCTGCA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCTCTGGTTGGCACAGTTaGAGGCCGCAACTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCSGWHS*RPQLSH
Trigger: GTGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGA...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGAGACTCCTGCTTCGCTaGAGTTCAGAGGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWRLLLR*SSEASL
Trigger: CAGTGAGGCCTCTGAACTTCAGCGAAGCAGGAGTCT...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACTTGGGTCTTTCCCTTaGTCTTCGGACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSLGSFP*SSDSSS
Trigger: GGAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCTGTGCTAGGTTTTTCTaGCAGCTGGCATCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCCARFF*QLASSA
Trigger: CGCGGAAGATGCCAGCTGTCAGAAAAACCTAGCACA...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTGTTTTCCACTCTCATaGCCCAGCTTCCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGACFPLS*PSFPRV
Trigger: CACCCTTGGGAAGCTGGGTCATGAGAGTGGAAAACA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGCTGCAGGGACTTTGGTaGCACAGCAGATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWLQGLW*HSRCSI
Trigger: GATGGAGCATCTGCTGTGTCACCAAAGTCCCTGCAG...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCTGGGTGGATTCTGGTaGAACTCGTCTTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSLGGFW*NSSYRH
Trigger: ATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGATGAATATGCACGTGTaGGTGTCTGAACGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKMNMHV*VSEREG
Trigger: GCCCTCTCGTTCAGACACGCACACGTGCATATTCAT...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCATGAATATGCACGTGTaGGTGTCTGAACGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVMNMHV*VSEREG
Trigger: GCCCTCTCGTTCAGACACGCACACGTGCATATTCAT...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGCACGGGAATAGACAGTaGACACAGCATCTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWHGNRQ*TQHLRL
Trigger: CAGGCGGAGATGCTGTGTGCACTGTCTATTCCCGTG...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAACTCATGCCGATGTTTaGTCTGTGGGGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSTHADV*SVGEGA
Trigger: AGCACCCTCCCCCACAGAGCAAACATCGGCATGAGT...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTTTCCGCGTTACTGCTTaGGTCTTTCCCTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIFRVTA*VFPLIF
Trigger: GAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAA...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGTCATCACTCACCCAGTaGGCAGTGGGTTTCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWSSLTQ*AVGFRR
Trigger: ACGCCTGAAACCCACTGCCCACTGGGTGAGTGATGA...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGCAGAGCTCACCCTCTaGGAGCCTCTGCATTATCAT +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPAELTL*EPLHYH
Trigger: ATGATAATGCAGAGGCTCCCAGAGGGTGAGCTCTGC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTTCCGGAAGCTTCTCTaGGTGCCTTTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAFRKLL*VPFWLA
Trigger: TGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGTGTGCTAGGTTTTTCTaGCAGCTGGCATCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWCARFF*QLASSA
Trigger: CGCGGAAGATGCCAGCTGTCAGAAAAACCTAGCACA...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGCTTCCCAAGGGTGCTaGAGCTTTCCTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GSGWILVKLVLQACPGAPASQGC*SFPSCL
Trigger: AAGACAAGAAGGAAAGCTTCAGCACCCTTGGGAAGC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGTGTTTTCCACTCTCATaGCCCAGCTTCCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWCFPLS*PSFPRV
Trigger: CACCCTTGGGAAGCTGGGTCATGAGAGTGGAAAACA...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTGGGTGGATTCTGGTaGAACTCGTCTTACAGGCAT +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLGGFW*NSSYRH
Trigger: ATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACCCTCTGGGAGCCTCTaGATTATCATGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSPSGSL*IIMCTT
Trigger: TGTGGTGCACATGATAATGCAGAGGCTCCCAGAGGG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGGAGCATGTGGCTTCCCTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTTTCCGCGTTACTGCTTaGGTCTTTCCCTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: GEHVASLQGQILVPAPQSFRVTA*VFPLIF
Trigger: GAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAA...AGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAGGGAAGCCACATGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTCTTCCACATCCATCTaGGACGGCTTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGASSTSI*DGFSSF
Trigger: GAAGGAAGAGAAGCCGTCCCAGATGGATGTGGAAGA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGGTTTTTCTGACAGCTaGCATCTTCCGCGTTACTGC +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAGFSDS*HLPRYC
Trigger: GCAGTAACGCGGAAGATGCCAGCTGTCAGAAAAACC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGTTCCGGAAGCTTCTCTaGGTGCCTTTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWFRKLL*VPFWLA
Trigger: TGCCAACCAGAAAGGCACCCAGAGAAGCTTCCGGAA...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp TCCCCTTTCTCTCTGCAGCCTGGATGGTGCCCCACTTaGATCAGAGGAAACTACCCAGTGGGACAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPFSLQPGWCPT*IRGNYPVGQAL
Trigger: CAGAGCTTGTCCCACTGGGTAGTTTCCTCTGATCAAAGTGGGGCACCATCCAGGCTGCAGAGAGAAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCCTGCATCTCGTCTTCTaGCAGATCTTCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: LPHQGDKPTVFPEASLGALHLVF*QIFHIH
Trigger: ATGGATGTGGAAGATCTGTCAGAAGACGAGATGCAG...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTGCATCTCGTCTTCTaGCAGATCTTCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLHLVF*QIFHIH
Trigger: ATGGATGTGGAAGATCTGTCAGAAGACGAGATGCAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAGCTTCCCAAGGGTGCTaGAGCTTTCCTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSASQGC*SFPSCL
Trigger: AAGACAAGAAGGAAAGCTTCAGCACCCTTGGGAAGC...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGGCACTTATCTTCTGTaGTGTCTTTCAGTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKGTYLL*CLSVKG
Trigger: ACCCTTGACTGAAAGACACCACAGAAGATAAGTGCC...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGGGCACTTATCTTCTGTaGTGTCTTTCAGTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVGTYLL*CLSVKG
Trigger: ACCCTTGACTGAAAGACACCACAGAAGATAAGTGCC...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACATCTTCCGCGTTACTaGTTGGGTCTTTCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSHLPRY*LGLSLD
Trigger: ATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATG...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCCTCCACAAACACAGATaGTTTCTCTTCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVLHKHR*FLFFLK
Trigger: CTTCAGGAAGAAGAGAAAGCATCTGTGTTTGTGGAG...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCGTTTATTGTGTTTGTTaGAGGTCACGTCATCACTCA +
Preference number: 4 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVVYCVC*RSRHHS
Trigger: TGAGTGATGACGTGACCTTCAACAAACACAATAAAC...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR TCA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCGTTTATTGTGTTTGTTaGAGGTCACGTCATCACTCA +
Preference number: 4 (lower is better)
Translates to: CCRSPARALLCTCVVCTSVYCVC*RSRHHS
Trigger: TGAGTGATGACGTGACCTTCAACAAACACAATAAAC...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCCTCCACAAACACAGATaGTTTCTCTTCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCLHKHR*FLFFLK
Trigger: CTTCAGGAAGAAGAGAAAGCATCTGTGTTTGTGGAG...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR GCA 90 bp ACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGCGCAGTCTGTGAGGAGCATCTTCCCGTaGTTGTTTATTGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TPALLRAGGIFSPKAQSVRSIFP*LFIVFV
Trigger: AACAAACACAATAAACAAGCACGGGAAGATGCTCCT...CACAGACTGCGCCTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp GGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTTGTaGAAGGTCACGTCATCACTCACCCAGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGASSRACLLCL*KVTSSLTQWAV
Trigger: CACTGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp AGAGGAGGAGCATCTTCCCGTGCTTGTTTATTGTGTTaGTTGAAGGTCACGTCATCACTCACCCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGGASSRACLLC*LKVTSSLTQWA
Trigger: TGCCCACTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
3UTR CAA 72 bp TGGTGGAGAGGAGGAGCATCTTCCCGTGCTTGTTTATaGTGTTTGTTGAAGGTCACGTCATCACTCACCCAG +
Preference number: 4 (lower is better)
Translates to: WWRGGASSRACL*CLLKVTSSLTQ
Trigger: CTGGGTGAGTGATGACGTGACCTTCAACAAACACAATAAACAAGCACGGGAAGATGCTCCTCCTCTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 90 bp TGCCCAAGGGCCACTCCTGAGGGCAGGGCCCTGAGGCCGGGCCGGTaGCTCCTGTGTGTGGTCCCCGTGTCCTTCTCCATCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: CPRATPEGRALRPGR*LLCVVPVSFSILQP
Trigger: GGGCTGGAGGATGGAGAAGGACACGGGGACCACACACAGGAGGCACCGGCCCGGCCTCAGGGCCCTGCCCTCAGGAGTGGCCCTTGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGCCTCACTGGCCGCCTaGAGGTGCCCAAGGGCCACT +
Preference number: 5 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPASLAA*RCPRAT
Trigger: AGTGGCCCTTGGGCACCTCAAGGCGGCCAGTGAGGC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCTCTGCCTCCTGTTCCTaGGCCTCCTGCAAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPSASCS*ASCKPP
Trigger: CGGAGGCTTGCAGGAGGCCAAGGAACAGGAGGCAGA...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 90 bp CGCCAAGCTCTGAGCACCCTCTCCGGGGCGCTAGGTGCTCTCCTTTaGCCTCTTCCTGGTGGAGTACGGGATGCAGCACACCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RQALSTLSGALGALL*PLPGGVRDAAHPAG
Trigger: ACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAGAGGGTGCTCAGAGCTTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS-3UTR CAA 90 bp TCTTGGGCGGCAAGTAGGTGGCCGGATCGCCCTCCGTCCCGCCTCCTGTGCCCCGGATGGTGCCCCACTTaGATCAGAGGAAACTACCCA +
Preference number: 5 (lower is better)
Translates to: SWAASRWPDRPPSRLLCPGWCPT*IRGNYP
Trigger: TGGGTAGTTTCCTCTGATCAAAGTGGGGCACCATCC...GGGGCACAGGAGGCGGGACGGAGGGCGATCCGGCCACCTACTTGCCGCCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 90 bp GCCTCCTGCAAGCCTCCGTCTGCGTGCTCGCCTTCCTGCACCTCCTaGATGCTGGCCTCCAAGTCGCTCTTCTCCCTCTCTGGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: ASCKPPSACSPSCTS*MLASKSLFSLSGSC
Trigger: ACAAGACCCAGAGAGGGAGAAGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CCA 90 bp GAGCACCCTCTCCGGGGCGCTAGGTGCTCTCCTTTGCCCTCTTCCTaGTGGAGTACGGGATGCAGCACACCCAGCTGGTCTGCATCTCGT +
Preference number: 5 (lower is better)
Translates to: EHPLRGARCSPLPSS*WSTGCSTPSWSASR
Trigger: ACGAGATGCAGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAGAGGGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS-3UTR CAA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTTCTGCCTCCTGTTCCTaGGCCTCCTGCAAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCISASCS*ASCKPP
Trigger: CGGAGGCTTGCAGGAGGCCAAGGAACAGGAGGCAGA...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 90 bp TGTTCCTTGGCCTCCTGCAAGCCTCCGTCTGCGTGCTCGCCTTCCTaGACCTCCTGCATGCTGGCCTCCAAGTCGCTCTTCTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: CSLASCKPPSACSPS*TSCMLASKSLFSLS
Trigger: AGAGAGGGAGAAGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAGGAGGCCAAGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CCA 90 bp CACCCTCTCCGGGGCGCTAGGTGCTCTCCTTTGCCCTCTTCCTGGTaGAGTACGGGATGCAGCACACCCAGCTGGTCTGCATCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: HPLRGARCSPLPSSW*STGCSTPSWSASRL
Trigger: AAGACGAGATGCAGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS-3UTR CAA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCATCGGCACCCCAGCGTaGCTCAGAGCTGGCGGGATC +
Preference number: 5 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCIGTPA*LRAGGI
Trigger: GATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGAT...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 90 bp CCTGCAAGCCTCCGTCTGCGTGCTCGCCTTCCTGCACCTCCTGCATaGTGGCCTCCAAGTCGCTCTTCTCCCTCTCTGGGTCTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: PASLRLRARLPAPPA*WPPSRSSPSLGLVF
Trigger: GAAAACAAGACCCAGAGAGGGAGAAGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp CTCCCTCCCTGGCTGAGTGATGGGCAGAGCTCACCCTCTGGGAGCCTCTGCATTGGCTTCTCTTCCTTCTaGGCATCGGTGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: LPPWLSDGQSSPSGSLCIGFSSF*ASVTTS
Trigger: GGAGGTGGTCACCGATGCCAAGAAGGAAGAGAAGCC...AATGCAGAGGCTCCCAGAGGGTGAGCTCTGCCCATCACTCAGCCAGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp CTCCAGGGACAGATCCTAGTGCCAGCACCACAGTCTCTGTTGCTCTCGCAGTCAATCGGCACCCCAGCGTaGCTCAGAGCTGGCGGGATC +
Preference number: 5 (lower is better)
Translates to: LQGQILVPAPQSLLLSQSIGTPA*LRAGGI
Trigger: GATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGAT...TGACTGCGAGAGCAACAGAGACTGTGGTGCTGGCACTAGGATCTGTCCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCGCTAGGTGCTCTCCTTaGCCCTCTTCCTGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: CCRSPARALLCTCVVCTSARCSP*PSSWWS
Trigger: ACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGC...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGGGCTTCTCTTCCTTCTaGGCATCGGTGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKGFSSF*ASVTTS
Trigger: GGAGGTGGTCACCGATGCCAAGAAGGAAGAGAAGCC...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCGCACCACAGTCTCTGTaGCTCTCGCAGTCACAGCCG +
Preference number: 5 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCAPQSL*LSQSQP
Trigger: CGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGC...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCTGGGTGCCTTTCTGGTaGGCACAGTTGGAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAWVPFW*AQLEAA
Trigger: TGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCA...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCTGGGTGCCTTTCTGGTaGGCACAGTTGGAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: GSGWILVKLVLQACPGAPWVPFW*AQLEAA
Trigger: TGCGGCCTCCAACTGTGCCAACCAGAAAGGCACCCA...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGACTCATGCCGATGTTaGCTCTGTGGGGGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: GSGWILVKLVLQACPGAPDSCRC*LCGGGC
Trigger: GCACCCTCCCCCACAGAGCAAACATCGGCATGAGTC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GGCTCTGGGTGGATTCTGGTGAAACTCGTCTTACAGGCATGTCCTGGAGCCCCCGCTAGGTGCTCTCCTTaGCCCTCTTCCTGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: GSGWILVKLVLQACPGAPARCSP*PSSWWS
Trigger: ACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGC...GGGGGCTCCAGGACATGCCTGTAAGACGAGTTTCACCAGAATCCACCCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCGCTTGGGTCTTTCCCTaGATCTTCGGACTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVAWVFP*IFGLQL
Trigger: GAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAGC...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TCTTTAGCCCAAAGGCGCAGTCTGTGCTCTCGCTCCTTCCAGGCCTGGCCAGTCTTCTGGTTGGCACAGTaGGAGGCCGCAACTGAGTCA +
Preference number: 5 (lower is better)
Translates to: SLAQRRSLCSRSFQAWPVFWLAQ*EAATES
Trigger: TGACTCAGTTGCGGCCTCCAACTGTGCCAACCAGAA...GACTGGCCAGGCCTGGAAGGAGCGAGAGCACAGACTGCGCCTTTGGGCTAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 90 bp TCCTTCTTGGCATCGGTGACCACCAGCTGGCATCTTCCGCGTTACTaGTTGGGTCTTTCCCTTGATCTTCGGACTCTGTGCCCATGCCCG +
Preference number: 5 (lower is better)
Translates to: SFLASVTTSWHLPRY*LGLSLDLRTLCPCP
Trigger: CGGGCATGGGCACAGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGGTGGTCACCGATGCCAAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS GCA 90 bp GGCGCTAGGTGCTCTCCTTTGCCCTCTTCCTGGTGGAGTACGGGATaGAGCACACCCAGCTGGTCTGCATCTCGTCTTCTGACAGATCTT +
Preference number: 5 (lower is better)
Translates to: GARCSPLPSSWWSTG*STPSWSASRLLTDL
Trigger: AAGATCTGTCAGAAGACGAGATGCAGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS-3UTR CAA 90 bp GTGGTCATCGGCACCCCAGCGTTGCTCAGAGCTGGCGGGATCTTTAGCCCAAAGCTTCCGCGTTACTGCTaGGGTCTTTCCCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: VVIGTPALLRAGGIFSPKLPRYC*GLSLDL
Trigger: AAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAG...CTTTGGGCTAAAGATCCCGCCAGCTCTGAGCAACGCTGGGGTGCCGATGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGGCTTGGGTCTTTCCCTaGATCTTCGGACTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWAWVFP*IFGLQL
Trigger: GAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAGC...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCTCCCGTGCTTGTTTATaGTGTTTGTTGAAGGTCACG +
Preference number: 5 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVSRACL*CLLKVT
Trigger: CGTGACCTTCAACAAACACAATAAACAAGCACGGGA...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp CTGCCCCACCAAGGGGACAAACCAACCGTATTTCCGGAAGCTTCTCTGGGTGCCGGATGGTGCCCCACTTaGATCAGAGGAAACTACCCA +
Preference number: 5 (lower is better)
Translates to: LPHQGDKPTVFPEASLGAGWCPT*IRGNYP
Trigger: TGGGTAGTTTCCTCTGATCAAAGTGGGGCACCATCC...GGCACCCAGAGAAGCTTCCGGAAATACGGTTGGTTTGTCCCCTTGGTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp CCAGCACCACAGTCTCTGTTGCTCTCGCAGTCACAGCCGGGGCTCAGCTGCGTCCTGAAGCTTTCCTTCTaGTCTTGTGCTAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PAPQSLLLSQSQPGLSCVLKLSF*SCARFF
Trigger: GAAAAACCTAGCACAAGACAAGAAGGAAAGCTTCAG...GACGCAGCTGAGCCCCGGCTGTGACTGCGAGAGCAACAGAGACTGTGGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGCTTCCGCGTTACTGCTaGGGTCTTTCCCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWLPRYC*GLSLDL
Trigger: AAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAG...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCCTGAAGCTTTCCTTCTaGTCTTGTGCTAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: CCRSPARALLCTCVVCTSLKLSF*SCARFF
Trigger: GAAAAACCTAGCACAAGACAAGAAGGAAAGCTTCAG...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCTCCCGTGCTTGTTTATaGTGTTTGTTGAAGGTCACG +
Preference number: 5 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCSRACL*CLLKVT
Trigger: CGTGACCTTCAACAAACACAATAAACAAGCACGGGA...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp TGCTGCAGGTCACCTGCCCGTGCCCTCCTGTGCACATGTGTGGTATGTACGAGCTGTTTATTGTGTTTGTaGAAGGTCACGTCATCACTC +
Preference number: 5 (lower is better)
Translates to: CCRSPARALLCTCVVCTSCLLCL*KVTSSL
Trigger: GAGTGATGACGTGACCTTCAACAAACACAATAAACA...GCTCGTACATACCACACATGTGCACAGGAGGGCACGGGCAGGTGACCTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCTGTTTATTGTGTTTGTaGAAGGTCACGTCATCACTC +
Preference number: 5 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCCLLCL*KVTSSL
Trigger: GAGTGATGACGTGACCTTCAACAAACACAATAAACA...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp ATCATGTGCACCACAGGGACGGCCCCCATGTGTCTCCACGGGAATAGACAGTGCAGCATCTTCCCGTGCTaGTTTATTGTGTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: IMCTTGTAPMCLHGNRQCSIFPC*FIVFVE
Trigger: TTCAACAAACACAATAAACAAGCACGGGAAGATGCT...GCACTGTCTATTCCCGTGGAGACACATGGGGGCCGTCCCTGTGGTGCACATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS-3UTR CAA 90 bp GGGCCGATGGGCACTTATCTTCTGTGGTGTCTTTCAGTCAAGGGTGGGTGCTGGAGCATCTTCCCGTGCTaGTTTATTGTGTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GPMGTYLLWCLSVKGGCWSIFPC*FIVFVE
Trigger: TTCAACAAACACAATAAACAAGCACGGGAAGATGCT...CCAGCACCCACCCTTGACTGAAAGACACCACAGAAGATAAGTGCCCATCGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 72 bp GCCACTCCTGAGGGCAGGGCCCTGAGGCCGGGCCGGTaGCTCCTGTGTGTGGTCCCCGTGTCCTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: ATPEGRALRPGR*LLCVVPVSFSI
Trigger: GATGGAGAAGGACACGGGGACCACACACAGGAGGCACCGGCCCGGCCTCAGGGCCCTGCCCTCAGGAGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 72 bp GCCTCCTGCAAGCCTCCGTCTGCGTGCTCGCCTTCCTaGACCTCCTGCATGCTGGCCTCCAAGTCGCTCTTC +
Preference number: 6 (lower is better)
Translates to: ASCKPPSACSPS*TSCMLASKSLF
Trigger: GAAGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAGGAGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CAA 90 bp TCGCCAAGCTCTGAGCACCCTCTCCGGGGCGCTAGGTGCTCTCCTTaGCCCTCTTCCTGGTGGAGTACGGGATGCAGCACACCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SPSSEHPLRGARCSP*PSSWWSTGCSTPSW
Trigger: CCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAGAGGGTGCTCAGAGCTTGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS GCA 72 bp CTGAGCACCCTCTCCGGGGCGCTAGGTGCTCTCCTTTaGCCTCTTCCTGGTGGAGTACGGGATGCAGCACAC +
Preference number: 6 (lower is better)
Translates to: LSTLSGALGALL*PLPGGVRDAAH
Trigger: GTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAGAGGGTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS CCA 72 bp CGGGGCGCTAGGTGCTCTCCTTTGCCCTCTTCCTGGTaGAGTACGGGATGCAGCACACCCAGCTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: RGARCSPLPSSW*STGCSTPSWSA
Trigger: TGCAGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS GCA 72 bp AAGCCTCCGTCTGCGTGCTCGCCTTCCTGCACCTCCTaGATGCTGGCCTCCAAGTCGCTCTTCTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: KPPSACSPSCTS*MLASKSLFSLS
Trigger: AGAGAGGGAGAAGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CCA 72 bp CGTCTGCGTGCTCGCCTTCCTGCACCTCCTGCATGCTaGCCTCCAAGTCGCTCTTCTCCCTCTCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: RLRARLPAPPAC*PPSRSSPSLGL
Trigger: AAGACCCAGAGAGGGAGAAGAGCGACTTGGAGGCCAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CAA 72 bp TCTGAGCACCCTCTCCGGGGCGCTAGGTGCTCTCCTTaGCCCTCTTCCTGGTGGAGTACGGGATGCAGCACA +
Preference number: 6 (lower is better)
Translates to: SEHPLRGARCSP*PSSWWSTGCST
Trigger: TGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCACCTAGCGCCCCGGAGAGGGTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS TCA 72 bp CTGGCATCTTCCGCGTTACTGCTTGGGTCTTTCCCTTaGTCTTCGGACTCTGTGCCCATGCCCGGCCCTCCG +
Preference number: 6 (lower is better)
Translates to: LASSALLLGSFP*SSDSVPMPGPP
Trigger: CGGAGGGCCGGGCATGGGCACAGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS CAA 72 bp GCTGGCATCTTCCGCGTTACTGCTTGGGTCTTTCCCTaGATCTTCGGACTCTGTGCCCATGCCCGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AGIFRVTAWVFP*IFGLCAHARPS
Trigger: GGAGGGCCGGGCATGGGCACAGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS CAA 90 bp TTCTTGGCATCGGTGACCACCAGCTGGCATCTTCCGCGTTACTGCTaGGGTCTTTCCCTTGATCTTCGGACTCTGTGCCCATGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: FLASVTTSWHLPRYC*GLSLDLRTLCPCPA
Trigger: GGCCGGGCATGGGCACAGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGGTGGTCACCGATGCCAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS GCA 72 bp TGCTCTCCTTTGCCCTCTTCCTGGTGGAGTACGGGATaGAGCACACCCAGCTGGTCTGCATCTCGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: CSPLPSSWWSTG*STPSWSASRLL
Trigger: CAGAAGACGAGATGCAGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636000.3
ENST00000636427.3
ENST00000636765.1
ENST00000637024.1
CDS GCA 72 bp GCATCGGTGACCACCAGCTGGCATCTTCCGCGTTACTaGTTGGGTCTTTCCCTTGATCTTCGGACTCTGTGC +
Preference number: 6 (lower is better)
Translates to: ASVTTSWHLPRY*LGLSLDLRTLC
Trigger: GCACAGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGGTGGTCACCGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS CAA 72 bp TCGGTGACCACCAGCTGGCATCTTCCGCGTTACTGCTaGGGTCTTTCCCTTGATCTTCGGACTCTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SVTTSWHLPRYC*GLSLDLRTLCP
Trigger: TGGGCACAGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGGTGGTCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS CAA 72 bp TCTTCCACATCCATCTGGGACGGCTTCTCTTCCTTCTaGGCATCGGTGACCACCAGCTGGCATCTTCCGCGT +
Preference number: 6 (lower is better)
Translates to: SSTSIWDGFSSF*ASVTTSWHLPR
Trigger: ACGCGGAAGATGCCAGCTGGTGGTCACCGATGCCAAGAAGGAAGAGAAGCCGTCCCAGATGGATGTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636765.1
ENST00000637024.1
CDS CAA 72 bp TCTTCCACATCCATCTGGGACGGCTTCTCTTCCTTCTaGGCATCGGTGACCACCTCCTCAGCATGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSTSIWDGFSSF*ASVTTSSAWSP
Trigger: GGGAGACCATGCTGAGGAGGTGGTCACCGATGCCAAGAAGGAAGAGAAGCCGTCCCAGATGGATGTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CAA 72 bp GCTGGCATCTTCCGCGTTACTGCTTGGGTCTTTCCCTaGATCTTCGGACTCCAGCTCCTTGTGAGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: AGIFRVTAWVFP*IFGLQLLVRLP
Trigger: AGGAAGCCTCACAAGGAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CAA 72 bp GGTTTTTCTGACAGCTGGCATCTTCCGCGTTACTGCTaGGGTCTTTCCCTTGATCTTCGGACTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GFSDSWHLPRYC*GLSLDLRTPAP
Trigger: AGGAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGTCAGAAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS GCA 72 bp CTAGGTTTTTCTGACAGCTGGCATCTTCCGCGTTACTaGTTGGGTCTTTCCCTTGATCTTCGGACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LGFSDSWHLPRY*LGLSLDLRTPA
Trigger: AGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGTCAGAAAAACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3
CDS CCA 72 bp GTTTTTCTGACAGCTGGCATCTTCCGCGTTACTGCTTaGGTCTTTCCCTTGATCTTCGGACTCCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: VFLTAGIFRVTA*VFPLIFGLQLL
Trigger: AAGGAGCTGGAGTCCGAAGATCAAGGGAAAGACCCAAGCAGTAACGCGGAAGATGCCAGCTGTCAGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636000.3
ENST00000636427.3