Pregenerated sensors for C12ORF60 (Homo sapiens)
Ensembl gene IDs: ENSG00000182993Ensembl transcript IDs: ENST00000330828.3, ENST00000527783.1, ENST00000533472.1, ENST00000543822.1, ENST00000648334.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTTCTGATCGTCAAGGTACTGAAGTATATAGAAATTGGTATATaGGTGACAAAAATGGAGTTTATTTTGTTTCCCAGGCCTAGATTT | + |
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Preference number: 1 (lower is better) Translates to: WLLIVKVLKYIEIGI*VTKMEFILFPRPRF Trigger: AAATCTAGGCCTGGGAAACAAAATAAACTCCATTTTTGTCACTCATATACCAATTTCTATATACTTCAGTACCTTGACGATCAGAAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| 3UTR-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGATTCTTCTTAGTGACTaGCATTTCAAACAGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: HLRYPTSASVFLVKVFSLILLSD*HFKQAF Trigger: GAAAGCCTGTTTGAAATGTCAGTCACTAAGAAGAAT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| 3UTR-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGAACATAGCACATGTTTaGCACCAAAAGATCTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: HLRYPTSASVFLVKVFSLNIAHV*HQKILE Trigger: TTCTAAGATCTTTTGGTGCCAAACATGTGCTATGTT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR GCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGCAACTAAGTCAAGATaGCTCCAACTCGAGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLATKSR*LQLERQ Trigger: CTGTCTCTCGAGTTGGAGGCATCTTGACTTAGTTGC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGGTTTTGGAAGAACCTaGAGGACTTCTGGTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLGFGRT*RTSGSL Trigger: GAGAGAACCAGAAGTCCTCCAGGTTCTTCCAAAACC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGAGATGTGGTGACATCTaGTTGCTCTTTGGTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLRCGDI*LLFGVF Trigger: GAAGACACCAAAGAGCAATCAGATGTCACCACATCT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGTTCTCTCAGATGTGGTaGCATCTGATTGCTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLFSQMW*HLIALW Trigger: CCAAAGAGCAATCAGATGTCACCACATCTGAGAGAA...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGCAACTCCTCTACATTaGTACTCTTCTGAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLATPLH*YSSEPQ Trigger: CTGTGGTTCAGAAGAGTACCAATGTAGAGGAGTTGC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCACAGAGATGATGACTaGCGTATGGGCACTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLHRDDD*RMGTFE Trigger: TTCAAAAGTGCCCATACGCCAGTCATCATCTCTGTG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCTGCTGCTGACTTTGTaGGATTTTTGGAATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLLLLTL*DFWNPQ Trigger: CTGAGGATTCCAAAAATCCCACAAAGTCAGCAGCAG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGCCATCAAAAGGATTTaGGTATTCATACTGCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLAIKRI*VFILRL Trigger: TAGCCGCAGTATGAATACTCAAATCCTTTTGATGGC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGACTTCTTTAGCTGACTaGTGCAACTCCTCTACATTG | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLTSLAD*CNSSTL Trigger: CAATGTAGAGGAGTTGCATCAGTCAGCTAAAGAAGT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGAATACTTCTTTAGCTaGCTGATGCAACTCCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLEYFFS*LMQLLY Trigger: GTAGAGGAGTTGCATCAGTCAGCTAAAGAAGTATTC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCAACAAATCTGCTGCTaGCTTTGTGGGATTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLQQICC*LCGIFG Trigger: TCCAAAAATCCCACAAAGTCAGCAGCAGATTTGTTG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR GCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGTGGTGACATCTGATTaGTCTTTGGTGTCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLVVTSD*SLVSSV Trigger: TACAGAAGACACCAAAGAGCAATCAGATGTCACCAC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCAGTCAGTGTGTTTATaGCAGAAGCAAGATCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLQSVCL*QKQDLV Trigger: TACAAGATCTTGCTTCTGTCATAAACACACTGACTG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGTGGCCATTGCAACCTTaGAACATAAAGACTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLWPLQP*NIKTPF Trigger: AAAAGGAGTCTTTATGTTCCAAGGTTGCAATGGCCA...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGATGATGACTGGCGTATaGGCACTTTTGAATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLMMTGV*ALLNTS Trigger: AGAAGTATTCAAAAGTGCCCATACGCCAGTCATCAT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR TCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGAAAGTCTTTTCTTTGTaGAAGGCTAGAGTACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLKVFSL*KARVLP Trigger: TGGAAGTACTCTAGCCTTTCACAAAGAAAAGACTTT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR GCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCAGATATCCTACTTCTaGAAGTGTTTTCCTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLQISYF*KCFPCE Trigger: TTCACAAGGAAAACACTTGCAGAAGTAGGATATCTG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGTCTTTATCGCTTTTTaGAGGATCTCTAAGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLVFIAF*RISKIG Trigger: ACCAATCTTAGAGATCCTCCAAAAAGCGATAAAGAC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR GCA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGAATTTTGTCATGTCTTaGATCCACTACAGATTGCAT | + |
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Preference number: 4 (lower is better) Translates to: HLRYPTSASVFLVKVFSLNFVMS*IHYRLH Trigger: ATGCAATCTGTAGTGGATGCAAGACATGACAAAATT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS GCA 90 bp | GTCCCGTCGAAACAGGAAAAGTTCCCTTGTCCCCCTCGCAGGGTGTaGGATGCAGATGTGGCTCGCTTCTTCATTGTCCCGCTGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VPSKQEKFPCPPRRV*DADVARFFIVPLLR Trigger: TCTGAGCAGCGGGACAATGAAGAAGCGAGCCACATCTGCATCGCACACCCTGCGAGGGGGACAAGGGAACTTTTCCTGTTTCGACGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS GCA 90 bp | AGCCTGGACTCTCCTCTAACTGTCCCTACCAAATTTGTGTCGTTCTaGTTCTGCCGGTCGGTGGCCTGCAGGTGTGCCAGTGTCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLDSPLTVPTKFVSF*FCRSVACRCASVSV Trigger: CACACTGACACTGGCACACCTGCAGGCCACCGACCGGCAGAAGCAGAACGACACAAATTTGGTAGGGACAGTTAGAGGAGAGTCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 90 bp | GTCGAAACAGGAAAAGTTCCCTTGTCCCCCTCGCAGGGTGTGCGATaGAGATGTGGCTCGCTTCTTCATTGTCCCGCTGCTCAGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: VETGKVPLSPSQGVR*RCGSLLHCPAAQTS Trigger: AGAGGTCTGAGCAGCGGGACAATGAAGAAGCGAGCCACATCTGCATCGCACACCCTGCGAGGGGGACAAGGGAACTTTTCCTGTTTCGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS GCA 90 bp | GACTCTCCTCTAACTGTCCCTACCAAATTTGTGTCGTTCTGCTTCTaGCGGTCGGTGGCCTGCAGGTGTGCCAGTGTCAGTGTGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DSPLTVPTKFVSFCF*RSVACRCASVSVFL Trigger: GAGGAACACACTGACACTGGCACACCTGCAGGCCACCGACCGGCAGAAGCAGAACGACACAAATTTGGTAGGGACAGTTAGAGGAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CCA 90 bp | GTTTTTATAGGCACAAGATGGGGGCATGGCAGGCCAGGGTGGTCTTaGGAAATGCAACAGTTGGGCAGGAAATGCCTGTCCTCACCTAGG | + |
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Preference number: 5 (lower is better) Translates to: VFIGTRWGHGRPGWS*EMQQLGRKCLSSPR Trigger: CCTAGGTGAGGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCTTGTGCCTATAAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CCA 90 bp | TTGGGAGTTTTTATAGGCACAAGATGGGGGCATGGCAGGCCAGGGTaGTCTTGGGAAATGCAACAGTTGGGCAGGAAATGCCTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LGVFIGTRWGHGRPG*SWEMQQLGRKCLSS Trigger: TGAGGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCTTGTGCCTATAAAAACTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 90 bp | CTTTATCTTCTGCAAAGACGGAGGGCTTTCTGTACCCTGGGTTCTTaGCTTGATGTACCAGAAGAATCAGATCACACCGAGGCTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LYLLQRRRAFCTLGS*LDVPEESDHTEAWR Trigger: TCTCCAAGCCTCGGTGTGATCTGATTCTTCTGGTACATCAAGGCAAGAACCCAGGGTACAGAAAGCCCTCCGTCTTTGCAGAAGATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS CCA 90 bp | GTTAGACCCTTTATCTTCTGCAAAGACGGAGGGCTTTCTGTACCCTaGGTTCTTGCCTTGATGTACCAGAAGAATCAGATCACACCGAGG | + |
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Preference number: 5 (lower is better) Translates to: VRPFIFCKDGGLSVP*VLALMYQKNQITPR Trigger: CCTCGGTGTGATCTGATTCTTCTGGTACATCAAGGCAAGAACCCAGGGTACAGAAAGCCCTCCGTCTTTGCAGAAGATAAAGGGTCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS TCA 90 bp | GGGACTCCAACATGCAATGATTGCCCCAGATCTCTGTACTACACCTaGCCACTTTCTGAAATATTTGAAGCCGAGGATACAGGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GTPTCNDCPRSLYYT*PLSEIFEAEDTGSS Trigger: AGAACTTCCTGTATCCTCGGCTTCAAATATTTCAGAAAGTGGTCAGGTGTAGTACAGAGATCTGGGGCAATCATTGCATGTTGGAGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS TCA 90 bp | AGAGATGATGACTGGCGTATGGGCACTTTTGAATACTTCTTTAGCTaGCTGATGCAACTCCTCTACATTGGTACTCTTCTGAACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: RDDDWRMGTFEYFFS*LMQLLYIGTLLNHR Trigger: TCTGTGGTTCAGAAGAGTACCAATGTAGAGGAGTTGCATCAGTCAGCTAAAGAAGTATTCAAAAGTGCCCATACGCCAGTCATCATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CCA 90 bp | AATAACTTCAGTTCAGTTAAGGCCAGTGCAGCCTTAATCTACTGCTaGTTTGTAAATCAATCACTCACCCCAACTCAAGAGCAGCCGATT | + |
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Preference number: 5 (lower is better) Translates to: NNFSSVKASAALIYC*FVNQSLTPTQEQPI Trigger: AATCGGCTGCTCTTGAGTTGGGGTGAGTGATTGATTTACAAACCAGCAGTAGATTAAGGCTGCACTGGCCTTAACTGAACTGAAGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCAGAGCACATGGCCATaGCAACCTTGGAACATAAAG | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLQSTWP*QPWNIK Trigger: CTTTATGTTCCAAGGTTGCAATGGCCATGTGCTCTG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS GCA 90 bp | GAGTTGGCTGTGAATCTATGCTCAACTGTGTGCAAATTGAATTGTTaGCACATTTATGTTCCCAACCGACAGAAGCCAAAATTAAATCTC | + |
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Preference number: 5 (lower is better) Translates to: ELAVNLCSTVCKLNC*HIYVPNRQKPKLNL Trigger: GAGATTTAATTTTGGCTTCTGTCGGTTGGGAACATAAATGTGGCAACAATTCAATTTGCACACAGTTGAGCATAGATTCACAGCCAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGGCGTATGGGCACTTTaGAATACTTCTTTAGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLGVWAL*NTSLAD Trigger: GTCAGCTAAAGAAGTATTCAAAAGTGCCCATACGCC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGAGCCATCAAAAGGATTaGAGTATTCATACTGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLSHQKD*SIHTAA Trigger: AGCCGCAGTATGAATACTCAAATCCTTTTGATGGCT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGATGGCCATTGCAACCTaGGAACATAAAGACTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLMAIAT*EHKDSF Trigger: AAAGGAGTCTTTATGTTCCAAGGTTGCAATGGCCAT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGTCTATCATAGTGGTTTaGGAAGAACCTGGAGGACTT | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLSIIVV*EEPGGL Trigger: AAGTCCTCCAGGTTCTTCCAAAACCACTATGATAGA...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGAATCTGCTGCTGACTTaGTGGGATTTTTGGAATCCT | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLNLLLT*WDFWNP Trigger: AGGATTCCAAAAATCCCACAAAGTCAGCAGCAGATT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGCATAGCCTTGACAATTaGTTCCAACAAATCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLHSLDN*FQQICC Trigger: GCAGCAGATTTGTTGGAACAAATTGTCAAGGCTATG...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGAACATTTTGGCAGCTaGAATCAGTCTCTCTTTATC | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLEHFGS*NQSLFI Trigger: GATAAAGAGAGACTGATTCAAGCTGCCAAAATGTTC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGAATTTTGTCATGTCTaGCATCCACTACAGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLEFCHV*HPLQIA Trigger: TGCAATCTGTAGTGGATGCAAGACATGACAAAATTC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGATTGGTCCCATAGCCTaGACAATTTGTTCCAACAAA | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLIGPIA*TICSNK Trigger: TTTGTTGGAACAAATTGTCAAGGCTATGGGACCAAT...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS TCA 90 bp | GTACTGTCTGGTAATTTAGTGATACATTGCTTTAATCTATGGCTGTaGATGCAGAGGCAAAAACATCTAACTTCTCTGAGACTCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: VLSGNLVIHCFNLWL*MQRQKHLTSLRLSF Trigger: AAAACTGAGTCTCAGAGAAGTTAGATGTTTTTGCCTCTGCATTCACAGCCATAGATTAAAGCAATGTATCACTAAATTACCAGACAGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS-3UTR CAA 90 bp | CATCTCAGATATCCTACTTCTGCAAGTGTTTTCCTTGTGAAAGTCTTTTCTTTGGACTTTGTGGGATTTTaGGAATCCTCAGTTTTTAGT | + |
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Preference number: 5 (lower is better) Translates to: HLRYPTSASVFLVKVFSLDFVGF*ESSVFS Trigger: ACTAAAAACTGAGGATTCCAAAAATCCCACAAAGTC...CAAAGAAAAGACTTTCACAAGGAAAACACTTGCAGAAGTAGGATATCTGAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CCA 72 bp | GCAGGAAATGCCTGTCCTCACCTAGGTCTGTGGGAGTaGAGCCCTAGGGAGGGACCACGCCCTCCTCTACCC | + |
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Preference number: 6 (lower is better) Translates to: AGNACPHLGLWE*SPREGPRPPLP Trigger: GGGTAGAGGAGGGCGTGGTCCCTCCCTAGGGCTCCACTCCCACAGACCTAGGTGAGGACAGGCATTTCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 72 bp | GTCGTTCTGCTTCTGCCGGTCGGTGGCCTGCAGGTGTaGCAGTGTCAGTGTGTTCCTCTCGACGTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: VVLLLPVGGLQV*QCQCVPLDVQL Trigger: GAGCTGGACGTCGAGAGGAACACACTGACACTGGCACACCTGCAGGCCACCGACCGGCAGAAGCAGAACGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CCA 72 bp | GGCACAAGATGGGGGCATGGCAGGCCAGGGTGGTCTTaGGAAATGCAACAGTTGGGCAGGAAATGCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GTRWGHGRPGWS*EMQQLGRKCLS Trigger: GGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCTTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CAA 90 bp | AGATGGGGGCATGGCAGGCCAGGGTGGTCTTGGGAAATGCAACAGTaGGGCAGGAAATGCCTGTCCTCACCTAGGTCTGTGGGAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RWGHGRPGWSWEMQQ*GRKCLSSPRSVGVE Trigger: CTCCACTCCCACAGACCTAGGTGAGGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 72 bp | GGGTGGTCTTGGGAAATGCAACAGTTGGGCAGGAAATaGCTGTCCTCACCTAGGTCTGTGGGAGTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GWSWEMQQLGRK*LSSPRSVGVEP Trigger: GGGCTCCACTCCCACAGACCTAGGTGAGGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 72 bp | GATGGGGGCATGGCAGGCCAGGGTGGTCTTGGGAAATaGAACAGTTGGGCAGGAAATGCCTGTCCTCACCTA | + |
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Preference number: 6 (lower is better) Translates to: DGGMAGQGGLGK*NSWAGNACPHL Trigger: TAGGTGAGGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CAA 72 bp | AGGCACAAGATGGGGGCATGGCAGGCCAGGGTGGTCTaGGGAAATGCAACAGTTGGGCAGGAAATGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RHKMGAWQARVV*GNATVGQEMPV Trigger: GACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCTTGTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CAA 90 bp | GTGGCCTGTAACACTTCCTGTCCCGTCGAAACAGGAAAAGTTCCCTaGTCCCCCTCGCAGGGTGTGCGATGCAGATGTGGCTCGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VACNTSCPVETGKVP*SPSQGVRCRCGSLL Trigger: AAGAAGCGAGCCACATCTGCATCGCACACCCTGCGAGGGGGACAAGGGAACTTTTCCTGTTTCGACGGGACAGGAAGTGTTACAGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS GCA 72 bp | ACACAAGTGGCCAGGCTCCCAGCAACTAAGTCAAGATaGCTCCAACTCGAGAGACAGGACCGTCAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: TQVARLPATKSR*LQLERQDRQPL Trigger: GAGTGGCTGACGGTCCTGTCTCTCGAGTTGGAGGCATCTTGACTTAGTTGCTGGGAGCCTGGCCACTTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533472.1 |
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| CDS CCA 72 bp | ATGGCAGGCCAGGGTGGTCTTGGGAAATGCAACAGTTaGGCAGGAAATGCCTGTCCTCACCTAGGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: MAGQGGLGKCNS*AGNACPHLGLW Trigger: CCACAGACCTAGGTGAGGACAGGCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 72 bp | TCTCCTCTAACTGTCCCTACCAAATTTGTGTCGTTCTaGTTCTGCCGGTCGGTGGCCTGCAGGTGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPLTVPTKFVSF*FCRSVACRCAS Trigger: ACTGGCACACCTGCAGGCCACCGACCGGCAGAAGCAGAACGACACAAATTTGGTAGGGACAGTTAGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 72 bp | CAGCTCCTGAAGCCCCAGTGGGTGTGTGTTACAGGGTaGTCTTTTAGTTTAGCCATCCGTAGTCGGCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: QLLKPQWVCVTG*SFSLAIRSRLA Trigger: CGCAAGCCGACTACGGATGGCTAAACTAAAAGAGCACCCTGTAACACACACCCACTGGGGCTTCAGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS GCA 72 bp | AAACAGGAAAAGTTCCCTTGTCCCCCTCGCAGGGTGTaGGATGCAGATGTGGCTCGCTTCTTCATTGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: KQEKFPCPPRRV*DADVARFFIVP Trigger: CGGGACAATGAAGAAGCGAGCCACATCTGCATCGCACACCCTGCGAGGGGGACAAGGGAACTTTTCCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS CCA 72 bp | CTACCAAATTTGTGTCGTTCTGCTTCTGCCGGTCGGTaGCCTGCAGGTGTGCCAGTGTCAGTGTGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPNLCRSASAGR*PAGVPVSVCSS Trigger: AGAGGAACACACTGACACTGGCACACCTGCAGGCCACCGACCGGCAGAAGCAGAACGACACAAATTTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS TCA 72 bp | CACACCGAGGCTTGGAGAATGAGTGCAAGGTTTTACTaGATGGGAGTAGCTCTCAGCAGATGGGGGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HTEAWRMSARFY*MGVALSRWGSQ Trigger: CTGGCTCCCCCATCTGCTGAGAGCTACTCCCATTCAGTAAAACCTTGCACTCATTCTCCAAGCCTCGGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS GCA 72 bp | AAGTTCCAACACAGGCTCCCAGCAACTAAGTCAAGATaGCTCCAACTCGAGAGACAGGACCGTCAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: KFQHRLPATKSR*LQLERQDRQPL Trigger: GAGTGGCTGACGGTCCTGTCTCTCGAGTTGGAGGCATCTTGACTTAGTTGCTGGGAGCCTGTGTTGGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS GCA 72 bp | CCTGCAGGACGAAACCATGAAGAGCCTGATCCTTCTTaGCATCCTGGCCGCCTTAGCGGTAGTAACTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: PAGRNHEEPDPS*HPGRLSGSNFV Trigger: CACAAAGTTACTACCGCTAAGGCGGCCAGGATGGCAAGAAGGATCAGGCTCTTCATGGTTTCGTCCTGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543822.1 |
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| CDS CCA 72 bp | TTTATAGGCACAAGATGGGGGCATGGCAGGCCAGGGTaGTCTTGGGAAATGCAACAGTTGGGCAGGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: FIGTRWGHGRPG*SWEMQQLGRKC Trigger: GCATTTCCTGCCCAACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCTTGTGCCTATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS CCA 72 bp | GGAGGATCCCCTGAGGCCAGGAGTGCAAAGCTGCAGTaGGCTATGATCACATCATTGTACTCTAGCCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GGSPEARSAKLQ*AMITSLYSSLE Trigger: TTCTAGGCTAGAGTACAATGATGTGATCATAGCCCACTGCAGCTTTGCACTCCTGGCCTCAGGGGATCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CCA 72 bp | GGTCTTGGGAGTTTTTATAGGCACAAGATGGGGGCATaGCAGGCCAGGGTGGTCTTGGGAAATGCAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: GLGSFYRHKMGA*QARVVLGNATV Trigger: AACTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCTTGTGCCTATAAAAACTCCCAAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000527783.1 ENST00000533472.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS TCA 72 bp | CCAAAAGCCCTTGGAATCCGGGACTCCAACATGCAATaGTTGCCCCAGATCTCTGTACTACACCTGACCACT | + |
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Preference number: 6 (lower is better) Translates to: PKALGIRDSNMQ*LPQISVLHLTT Trigger: AGTGGTCAGGTGTAGTACAGAGATCTGGGGCAATCATTGCATGTTGGAGTCCCGGATTCCAAGGGCTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS GCA 72 bp | TCGGCTTGCGTAAGCTCAGTTAGACCCTTTATCTTCTaGAAAGACGGAGGGCTTTCTGTACCCTGGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SACVSSVRPFIF*KDGGLSVPWVL Trigger: AAGAACCCAGGGTACAGAAAGCCCTCCGTCTTTGCAGAAGATAAAGGGTCTAACTGAGCTTACGCAAGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS CAA 72 bp | TTCACTCTTTTCTCACAAATCTGTTCCCAAAAGCCCTaGGAATCCGGGACTCCAACATGCAATGATTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: FTLFSQICSQKP*ESGTPTCNDCP Trigger: GGGGCAATCATTGCATGTTGGAGTCCCGGATTCCAAGGGCTTTTGGGAACAGATTTGTGAGAAAAGAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS CCA 72 bp | TTTATCTTCTGCAAAGACGGAGGGCTTTCTGTACCCTaGGTTCTTGCCTTGATGTACCAGAAGAATCAGATC | + |
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Preference number: 6 (lower is better) Translates to: FIFCKDGGLSVP*VLALMYQKNQI Trigger: GATCTGATTCTTCTGGTACATCAAGGCAAGAACCCAGGGTACAGAAAGCCCTCCGTCTTTGCAGAAGATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527783.1 ENST00000543822.1 ENST00000648334.1 |
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| CDS TCA 72 bp | GACTGGCGTATGGGCACTTTTGAATACTTCTTTAGCTaGCTGATGCAACTCCTCTACATTGGTACTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DWRMGTFEYFFS*LMQLLYIGTLL Trigger: CAGAAGAGTACCAATGTAGAGGAGTTGCATCAGTCAGCTAAAGAAGTATTCAAAAGTGCCCATACGCCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CCA 72 bp | CCTCTACATTGGTACTCTTCTGAACCACAGAGCACATaGCCATTGCAACCTTGGAACATAAAGACTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PLHWYSSEPQST*PLQPWNIKTPF Trigger: AAAAGGAGTCTTTATGTTCCAAGGTTGCAATGGCCATGTGCTCTGTGGTTCAGAAGAGTACCAATGTAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CCA 72 bp | AGTTCAGTTAAGGCCAGTGCAGCCTTAATCTACTGCTaGTTTGTAAATCAATCACTCACCCCAACTCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSVKASAALIYC*FVNQSLTPTQE Trigger: CTCTTGAGTTGGGGTGAGTGATTGATTTACAAACCAGCAGTAGATTAAGGCTGCACTGGCCTTAACTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CAA 72 bp | GGCTGTGAATCTATGCTCAACTGTGTGCAAATTGAATaGTTGCCACATTTATGTTCCCAACCGACAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCESMLNCVQIE*LPHLCSQPTEA Trigger: GGCTTCTGTCGGTTGGGAACATAAATGTGGCAACAATTCAATTTGCACACAGTTGAGCATAGATTCACAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS GCA 72 bp | TTCAGTTCAGTTAAGGCCAGTGCAGCCTTAATCTACTaGTGGTTTGTAAATCAATCACTCACCCCAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: FSSVKASAALIY*WFVNQSLTPTQ Trigger: TTGAGTTGGGGTGAGTGATTGATTTACAAACCAGCAGTAGATTAAGGCTGCACTGGCCTTAACTGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CAA 90 bp | GTCTTTATCGCTTTTTGGAGGATCTCTAAGATTGGTCCCATAGCCTaGACAATTTGTTCCAACAAATCTGCTGCTGACTTTGTGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: VFIAFWRISKIGPIA*TICSNKSAADFVGF Trigger: AAATCCCACAAAGTCAGCAGCAGATTTGTTGGAACAAATTGTCAAGGCTATGGGACCAATCTTAGAGATCCTCCAAAAAGCGATAAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CAA 90 bp | ATTGCCCCAGATCTCTGTACTACACCTGACCACTTTCTGAAATATTaGAAGCCGAGGATACAGGAAGTTCTTAAAGGTAACAATACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IAPDLCTTPDHFLKY*KPRIQEVLKGNNTG Trigger: ACCTGTATTGTTACCTTTAAGAACTTCCTGTATCCTCGGCTTCAAATATTTCAGAAAGTGGTCAGGTGTAGTACAGAGATCTGGGGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527783.1 ENST00000648334.1 |
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| CDS CAA 90 bp | GCGGCTAAACAATTCAGTCAGTGTGTTTATGACAGAAGCAAGATCTaGTACATGAAAGAAGAACATTTTGGCAGCTTGAATCAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AAKQFSQCVYDRSKI*YMKEEHFGSLNQSL Trigger: GAGAGACTGATTCAAGCTGCCAAAATGTTCTTCTTTCATGTACAAGATCTTGCTTCTGTCATAAACACACTGACTGAATTGTTTAGCCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS GCA 72 bp | GTGAATCTATGCTCAACTGTGTGCAAATTGAATTGTTaGCACATTTATGTTCCCAACCGACAGAAGCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VNLCSTVCKLNC*HIYVPNRQKPK Trigger: TTTTGGCTTCTGTCGGTTGGGAACATAAATGTGGCAACAATTCAATTTGCACACAGTTGAGCATAGATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CAA 72 bp | TGTGAATCTATGCTCAACTGTGTGCAAATTGAATTGTaGCCACATTTATGTTCCCAACCGACAGAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: CESMLNCVQIEL*PHLCSQPTEAK Trigger: TTTGGCTTCTGTCGGTTGGGAACATAAATGTGGCAACAATTCAATTTGCACACAGTTGAGCATAGATTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CAA 90 bp | AGAGTTGGCTGTGAATCTATGCTCAACTGTGTGCAAATTGAATTGTaGCCACATTTATGTTCCCAACCGACAGAAGCCAAAATTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: RVGCESMLNCVQIEL*PHLCSQPTEAKIKS Trigger: AGATTTAATTTTGGCTTCTGTCGGTTGGGAACATAAATGTGGCAACAATTCAATTTGCACACAGTTGAGCATAGATTCACAGCCAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CCA 72 bp | GTTCCAACAAATCTGCTGCTGACTTTGTGGGATTTTTaGAATCCTCAGTTTTTAGTACATCCTGCAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VPTNLLLTLWDF*NPQFLVHPAVF Trigger: AAAAACTGCAGGATGTACTAAAAACTGAGGATTCCAAAAATCCCACAAAGTCAGCAGCAGATTTGTTGGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CAA 72 bp | TGTTCCAACAAATCTGCTGCTGACTTTGTGGGATTTTaGGAATCCTCAGTTTTTAGTACATCCTGCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSNKSAADFVGF*ESSVFSTSCSF Trigger: AAAACTGCAGGATGTACTAAAAACTGAGGATTCCAAAAATCCCACAAAGTCAGCAGCAGATTTGTTGGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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| CDS CAA 90 bp | AAAAGAGTTGGCTGTGAATCTATGCTCAACTGTGTGCAAATTGAATaGTTGCCACATTTATGTTCCCAACCGACAGAAGCCAAAATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KRVGCESMLNCVQIE*LPHLCSQPTEAKIK Trigger: TTTAATTTTGGCTTCTGTCGGTTGGGAACATAAATGTGGCAACAATTCAATTTGCACACAGTTGAGCATAGATTCACAGCCAACTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527783.1 |
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| CDS CAA 72 bp | AATGTAACTATTGTTTTTCACAGCCATCAAAAGGATTaGAGTATTCATACTGCGGCTAAACAATTCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: NVTIVFHSHQKD*SIHTAAKQFSQ Trigger: CTGACTGAATTGTTTAGCCGCAGTATGAATACTCAAATCCTTTTGATGGCTGTGAAAAACAATAGTTACATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330828.3 |
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