Pregenerated sensors for C12ORF50 (Homo sapiens)
Ensembl gene IDs: ENSG00000165805Ensembl transcript IDs: ENST00000298699.7, ENST00000546547.1, ENST00000550553.5, ENST00000551163.2, ENST00000551944.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTGTAGGACCCATGCGTaGGCCTGCTGCGGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYCRTHA*ACCGKV Trigger: CACCTTCCCGCAGCAGGCCCACGCATGGGTCCTACA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTCATGCGTGGGCCTGCTaGGGGAAGGTGCATTCAACG | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFHAWAC*GKVHST Trigger: CGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATG...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTACCCATGCGTGGGCCTaGTGCGGGAAGGTGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFTHAWA*CGKVHS Trigger: TGAATGCACCTTCCCGCAGCAGGCCCACGCATGGGT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATCCTGCTGCGGGAAGGTaGATTCAACGCGACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYPAAGR*IQRDSP Trigger: AGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGG...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATGGTTTCAGAGGTTCTTaGCTCTGGGACTGGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYGFRGS*LWDWSG Trigger: TCCACTCCAGTCCCAGAGTCAAGAACCTCTGAAACC...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTAGCACACAGTGTCACTaGCAAGGGCCTCTTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFSTQCH*QGPLHS Trigger: ACTGTGAAGAGGCCCTTGGCAGTGACACTGTGTGCT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTCAACGCGACAGTCCTaGCAGCATCTCTTTGAACGT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYSTRQS*QHLFER Trigger: ACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTCTTGGGGCCTGTACTaGTCTCTGCATTCCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYSWGLY*SLHSRV Trigger: AACTCTGGAATGCAGAGAGCAGTACAGGCCCCAAGA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTGTCGGAATCGGCACTaGGAACCCTTCTCTAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYCRNRH*EPFSSF Trigger: AAAGCTAGAGAAGGGTTCCCAGTGCCGATTCCGACA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTGCTTTGCAGAAACGCTaGAAGTGGTTGCTAGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFALQKR*KWLLVS Trigger: GCTTACTAGCAACCACTTTCAGCGTTTCTGCAAAGC...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTACACAACCAAGAGGCTaGGTTTCCCAGAAGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFTQPRG*VSQKHE Trigger: TTCATGCTTCTGGGAAACTCAGCCTCTTGGTTGTGT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATATTTGTCTGGACTaGGGTTGGGTTTGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFYICLD*GWVWVP Trigger: GGGAACCCAAACCCAACCTCAGTCCAGACAAATATA...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATGCCTGTACTGCTCTCTaGATTCCAGAGTTAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYACTAL*IPELGK Trigger: CTTTCCTAACTCTGGAATGCAGAGAGCAGTACAGGC...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTTTATTTTGGGGTCTTaGGGCCTGTACTGCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYFILGS*GLYCSL Trigger: CAGAGAGCAGTACAGGCCCCAAGACCCCAAAATAAA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATAGTTTCCCAGAAGCATaGAATGCTGCAGTTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYSFPEA*NAAVLL Trigger: CAGCAAAACTGCAGCATTTCATGCTTCTGGGAAACT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTAGGGAATGCTTTGGATaGGGACTGTCCTTGTTATCT | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFRECFG*GLSLLS Trigger: AGATAACAAGGACAGTCCTCATCCAAAGCATTCCCT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTACCTCCAGGTTTACTTaGTCCCATTTCTTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFTSRFT*SHFFLA Trigger: AGCCAAGAAGAAATGGGAGCAAGTAAACCTGGAGGT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTACTCTGGGACTGGAGTaGAATTCCTTCCTGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFTLGLE*NSFLNF Trigger: GAAATTCAGGAAGGAATTCCACTCCAGTCCCAGAGT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATGGCTTCTTCACTGGCTaGACATCATTCATTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYGFFTG*TSFIEE Trigger: CTCTTCAATGAATGATGTCCAGCCAGTGAAGAAGCC...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATATGGTGGATGGGTCGTaGTATATTTTCCTGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYMVDGS*YIFLRF Trigger: AAACCTCAGGAAAATATATCACGACCCATCCACCAT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTCCCAGAAGCATGAAATaGTGCAGTTTTGCTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFPRSMK*CSFAAF Trigger: AAATGCAGCAAAACTGCAGCATTTCATGCTTCTGGG...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTAAATATGACCCTCTGTaGAACATAACAGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFKYDPL*NITVTS Trigger: GGAGGTGACTGTTATGTTCCACAGAGGGTCATATTT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTTTCTTTCTGTAGTGTaGTATTGCTACTTGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYFLSVV*YCYLVA Trigger: TGCCACCAAGTAGCAATATCACACTACAGAAAGAAA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATAGTGGAATTCCTTCCTaGATTTCTTTCTGTAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYSGIPS*ISFCSV Trigger: CACACTACAGAAAGAAATTCAGGAAGGAATTCCACT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTGAAATGCTGCAGTTTTaGTGCATTTCCATGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFEMLQF*CISMCL Trigger: TAGACACATGGAAATGCAGCAAAACTGCAGCATTTC...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATAACGTGGATATAGGATaGATTCTCCGCATTTCGATT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYNVDIG*ILRISI Trigger: AATCGAAATGCGGAGAATGCATCCTATATCCACGTT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATCTAAAGGATGGTGGATaGGTCGTGATATATTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYLKDGG*VVIYFP Trigger: AGGAAAATATATCACGACCCATCCACCATCCTTTAG...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATGCTCCCATTTCTTCTTaGCTCTGGATATATCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYAPISS*LWIYLF Trigger: GAAAAGATATATCCAGAGCCAAGAAGAAATGGGAGC...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR TCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTGGTTTCCCATGCAATaGTGTTTTTATTTCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYWFPMQ*CFYFTL Trigger: CAAGGTGAAATAAAAACATCATTGCATGGGAAACCA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTATGCTGCAGTTTTGCTaGATTTCCATGTGTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: NEFQTYINTLAAVGNLHFMLQFC*ISMCLN Trigger: ATTTAGACACATGGAAATGCAGCAAAACTGCAGCAT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR GCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATCTTCTTGCAATTCACTaGCATTTTCCAAAGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYLLAIH*HFPKAF Trigger: AAAAGCCTTTGGAAAATGGCAGTGAATTGCAAGAAG...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATAAAACTAAAGGATGGTaGATGGGTCGTGATATATTT | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYKTKGW*MGRDIF Trigger: AAATATATCACGACCCATCCACCATCCTTTAGTTTT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CCA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATTTTAAAACTAAAGGATaGTGGATGGGTCGTGATATA | + |
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Preference number: 4 (lower is better) Translates to: EFQTYINTLAAVGNLHFYFKTKG*WMGRDI Trigger: TATATCACGACCCATCCACCATCCTTTAGTTTTAAA...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS TCA 90 bp | CATGCGTGGGCCTGCTGCGGGAAGGTGCATTCAACGCGACAGTCCTaGCAGCATCTCTTTGAACGTGGATATAGGATGCATTCTCCGCAT | + |
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Preference number: 5 (lower is better) Translates to: HAWACCGKVHSTRQS*QHLFERGYRMHSPH Trigger: ATGCGGAGAATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS CCA 90 bp | TCTTCACAGTGTCGGAATCGGCACTGGGAACCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGGCACTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: SSQCRNRHWEPVPHG*GGLRIMAGGERHFL Trigger: TAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGGTTCCCAGTGCCGATTCCGACACTGTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS GCA 90 bp | ATGGACTTTATTGTAGGACCCATGCGTGGGCCTGCTGCGGGAAGGTaGATTCAACGCGACAGTCCTGACAGCATCTCTTTGAACGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: MDFIVGPMRGPAAGR*IQRDSPDSISLNVD Trigger: ATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATGGGTCCTACAATAAAGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS TCA 90 bp | TGGCTGCTACCCGTCAGAGCAGGAGTCCAGTTTATAACCGTGAGTTaGTCCTGTGCCTCTCCCCTGATGAGGATTTGTGTTTCTGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: WLLPVRAGVQFITVS*SCASPLMRICVSAR Trigger: TCTGGCAGAAACACAAATCCTCATCAGGGGAGAGGCACAGGATCAACTCACGGTTATAAACTGGACTCCTGCTCTGACGGGTAGCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS GCA 90 bp | GATCTAAACATTTCCTCTCTCTCCATAATGAGCACACAGTGTCACTaGCAAGGGCCTCTTCACAGTGTCGGAATCGGCACTGGGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: DLNISSLSIMSTQCH*QGPLHSVGIGTGNP Trigger: AGGGTTCCCAGTGCCGATTCCGACACTGTGAAGAGGCCCTTGGCAGTGACACTGTGTGCTCATTATGGAGAGAGAGGAAATGTTTAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS GCA 90 bp | GATCTAAACATTTCCTCTCTCTCCATAATGAGCACACAGTGTCACTaGCAAGGGCCTCTTCACAGTGTCGGAATCGGCACTGGGAACCAT | + |
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Preference number: 5 (lower is better) Translates to: DLNISSLSIMSTQCH*QGPLHSVGIGTGNH Trigger: ATGGTTCCCAGTGCCGATTCCGACACTGTGAAGAGGCCCTTGGCAGTGACACTGTGTGCTCATTATGGAGAGAGAGGAAATGTTTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551163.2 |
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| CDS TCA 90 bp | GTCGGAATCGGCACTGGGAACCCTTCTCTAGCTTTGCAGAAACGCTaGAAGTGGTTGCTAGTAAGCACACAAACTCAAACTTCTAGAATT | + |
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Preference number: 5 (lower is better) Translates to: VGIGTGNPSLALQKR*KWLLVSTQTQTSRI Trigger: AATTCTAGAAGTTTGAGTTTGTGTGCTTACTAGCAACCACTTTCAGCGTTTCTGCAAAGCTAGAGAAGGGTTCCCAGTGCCGATTCCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550553.5 |
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| CDS TCA 90 bp | AGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: SSRSLRNRHTDFHNG*TSLQSHQQCKSVPI Trigger: AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS-3UTR CAA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATGGACTGAGGTTGGGTTaGGGTTCCCTGTTAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: EFQTYINTLAAVGNLHFYGLRLG*GSLLAW Trigger: CCATGCTAACAGGGAACCCAAACCCAACCTCAGTCC...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS CCA 90 bp | ACCGACCTCACTGCCCCAGATAGCCGAAGCATTTATATCCTCACCTaGTCCTTAAATACTTATTTTTCTCTGACATATCTACATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: TDLTAPDSRSIYILT*SLNTYFSLTYLHFC Trigger: GCAGAAATGTAGATATGTCAGAGAAAAATAAGTATTTAAGGACCAGGTGAGGATATAAATGCTTCGGCTATCTGGGGCAGTGAGGTCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS-3UTR CAA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATAGGTTTCAGAGGTTCTaGACTCTGGGACTGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: EFQTYINTLAAVGNLHFYRFQRF*TLGLEW Trigger: CCACTCCAGTCCCAGAGTCAAGAACCTCTGAAACCT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTGCTGGACATCATTCATaGAAGAGGGGTCCTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFAGHHS*KRGPLC Trigger: GCAGAGAGGACCCCTCTTCAATGAATGATGTCCAGC...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTTGTCTGGACTGAGGTaGGGTTTGGGTTCCCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFLSGLR*GLGSLL Trigger: TAACAGGGAACCCAAACCCAACCTCAGTCCAGACAA...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTCCTGACAGCATCTCTTaGAACGTGGATATAGGATGC | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFPDSIS*NVDIGC Trigger: GCATCCTATATCCACGTTCAAAGAGATGCTGTCAGG...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTAACCTCCAGGTTTACTaGCTCCCATTTCTTCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFNLQVY*LPFLLG Trigger: GCCAAGAAGAAATGGGAGCAAGTAAACCTGGAGGTT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS CCA 90 bp | GAAGAGAGGTGGATAACATTCTTCCCTCTTTTGACACATGTTCCATaGTTGTTCTTTATCTTTTATCTCTCTCCTACTTCCATCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: EERWITFFPLLTHVP*LFFIFYLSPTSIFT Trigger: AGTGAAGATGGAAGTAGGAGAGAGATAAAAGATAAAGAACAACCATGGAACATGTGTCAAAAGAGGGAAGAATGTTATCCACCTCTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551163.2 |
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| CDS-3UTR CAA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATCAGCAATGTCAGTCTTaGGTTTCCCATGCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: EFQTYINTLAAVGNLHFYQQCQS*VSHAMM Trigger: CATCATTGCATGGGAAACCAAAGACTGACATTGCTG...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTGATGTTGACGTATATTaGTCTGGACTGAGGTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFDVDVY*SGLRLG Trigger: ACCCAACCTCAGTCCAGACAAATATACGTCAACATC...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTACCTTGCCTTTCATATaGGCTAAGTTTTGTCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFTLPFI*AKFCRN Trigger: GTTCCGACAAAACTTAGCCAATATGAAAGGCAAGGT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTAAGACTATCTCCTTCTaGCAATTCACTGCCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFKTISF*QFTAIF Trigger: GAAAATGGCAGTGAATTGCAAGAAGGAGATAGTCTT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTTCTGTAGTGTGATATaGCTACTTGGTGGCAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFFCSVI*LLGGKN Trigger: ATTTTTGCCACCAAGTAGCAATATCACACTACAGAA...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | GAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTTATACTAGAAGCATCATTTaGTTCATCTACTTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: EFQTYINTLAAVGNLHFYTRSII*FIYFLF Trigger: GAAGAGGAAGTAGATGAACAAAATGATGCTTCTAGT...ATAAAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS-3UTR CAA 90 bp | AATGAATTCCAGACCTACATAAATACACTGGCAGCTGTTGGTAATTTGCATTTTATACACTGGCAGCTGTaGGTAATTTGCATTTTTATC | + |
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Preference number: 5 (lower is better) Translates to: NEFQTYINTLAAVGNLHFIHWQL*VICIFI Trigger: GATAAAAATGCAAATTACCAACAGCTGCCAGTGTAT...AAAATGCAAATTACCAACAGCTGCCAGTGTATTTATGTAGGTCTGGAATTCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298699.7 |
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| CDS CCA 72 bp | CTGCCAAGGGCCTCTTCACAGTGTCGGAATCGGCACTaGGAACCAGTTCCACATGGCTGGGGAGGCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LPRASSQCRNRH*EPVPHGWGGLR Trigger: TCTGAGGCCTCCCCAGCCATGTGGAACTGGTTCCCAGTGCCGATTCCGACACTGTGAAGAGGCCCTTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS CCA 72 bp | TGTCGGAATCGGCACTGGGAACCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: CRNRHWEPVPHG*GGLRIMAGGER Trigger: CCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGGTTCCCAGTGCCGATTCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS GCA 72 bp | ATTGTAGGACCCATGCGTGGGCCTGCTGCGGGAAGGTaGATTCAACGCGACAGTCCTGACAGCATCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: IVGPMRGPAAGR*IQRDSPDSISL Trigger: CAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATGGGTCCTACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS TCA 72 bp | GCCTGCTGCGGGAAGGTGCATTCAACGCGACAGTCCTaGCAGCATCTCTTTGAACGTGGATATAGGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: ACCGKVHSTRQS*QHLFERGYRMH Trigger: ATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS CAA 90 bp | ATGGCTGCTACCCGTCAGAGCAGGAGTCCAGTTTATAACCGTGAGTaGATCCTGTGCCTCTCCCCTGATGAGGATTTGTGTTTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MAATRQSRSPVYNRE*ILCLSPDEDLCFCQ Trigger: CTGGCAGAAACACAAATCCTCATCAGGGGAGAGGCACAGGATCAACTCACGGTTATAAACTGGACTCCTGCTCTGACGGGTAGCAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS TCA 72 bp | CCCGTCAGAGCAGGAGTCCAGTTTATAACCGTGAGTTaGTCCTGTGCCTCTCCCCTGATGAGGATTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PVRAGVQFITVS*SCASPLMRICV Trigger: AACACAAATCCTCATCAGGGGAGAGGCACAGGATCAACTCACGGTTATAAACTGGACTCCTGCTCTGACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS GCA 72 bp | ATTTCCTCTCTCTCCATAATGAGCACACAGTGTCACTaGCAAGGGCCTCTTCACAGTGTCGGAATCGGCACT | + |
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Preference number: 6 (lower is better) Translates to: ISSLSIMSTQCH*QGPLHSVGIGT Trigger: AGTGCCGATTCCGACACTGTGAAGAGGCCCTTGGCAGTGACACTGTGTGCTCATTATGGAGAGAGAGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551163.2 ENST00000551944.1 |
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| CDS CAA 72 bp | GCTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATaGGGATATCTCCTAATGCTATCCCTCCCCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: AGVLHPLTRHLA*GYLLMLSLPLP Trigger: GGGAAGGGGGAGGGATAGCATTAGGAGATATCCCAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS CAA 72 bp | ACCCGTCAGAGCAGGAGTCCAGTTTATAACCGTGAGTaGATCCTGTGCCTCTCCCCTGATGAGGATTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TRQSRSPVYNRE*ILCLSPDEDLC Trigger: ACACAAATCCTCATCAGGGGAGAGGCACAGGATCAACTCACGGTTATAAACTGGACTCCTGCTCTGACGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS GCA 72 bp | AGCAGGAGTCCAGTTTATAACCGTGAGTTGATCCTGTaGCTCTCCCCTGATGAGGATTTGTGTTTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRSPVYNRELIL*LSPDEDLCFCQ Trigger: CTGGCAGAAACACAAATCCTCATCAGGGGAGAGGCACAGGATCAACTCACGGTTATAAACTGGACTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS CAA 72 bp | TTGGTGACCCTTCAGAATTATGAGAATCGGGCAAAGTaGATGGCTGCTACCCGTCAGAGCAGGAGTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LVTLQNYENRAK*MAATRQSRSPV Trigger: AACTGGACTCCTGCTCTGACGGGTAGCAGCCATCAACTTTGCCCGATTCTCATAATTCTGAAGGGTCACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS CAA 90 bp | AGCAACTCCTTGGTGACCCTTCAGAATTATGAGAATCGGGCAAAGTaGATGGCTGCTACCCGTCAGAGCAGGAGTCCAGTTTATAACCGT | + |
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Preference number: 6 (lower is better) Translates to: SNSLVTLQNYENRAK*MAATRQSRSPVYNR Trigger: ACGGTTATAAACTGGACTCCTGCTCTGACGGGTAGCAGCCATCAACTTTGCCCGATTCTCATAATTCTGAAGGGTCACCAAGGAGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS CAA 72 bp | AGGTGCATTCAACGCGACAGTCCTGACAGCATCTCTTaGAACGTGGATATAGGATGCATTCTCCGCATTTCG | + |
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Preference number: 6 (lower is better) Translates to: RCIQRDSPDSIS*NVDIGCILRIS Trigger: CGAAATGCGGAGAATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS CAA 90 bp | GCTGCGGGAAGGTGCATTCAACGCGACAGTCCTGACAGCATCTCTTaGAACGTGGATATAGGATGCATTCTCCGCATTTCGATTTTTATT | + |
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Preference number: 6 (lower is better) Translates to: AAGRCIQRDSPDSIS*NVDIGCILRISIFI Trigger: AATAAAAATCGAAATGCGGAGAATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS TCA 72 bp | GGCACTGGGAACCCTTCTCTAGCTTTGCAGAAACGCTaGAAGTGGTTGCTAGTAAGCACACAAACTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: GTGNPSLALQKR*KWLLVSTQTQT Trigger: AGTTTGAGTTTGTGTGCTTACTAGCAACCACTTTCAGCGTTTCTGCAAAGCTAGAGAAGGGTTCCCAGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298699.7 ENST00000550553.5 |
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| CDS TCA 72 bp | ACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGTaGAAGGCACTTCTTACACTTCTCTACCTTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TWLGRPQNHGRR*KALLTLLYLFK Trigger: TTTAAAAAGGTAGAGAAGTGTAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS CAA 72 bp | AAACCACATCAACAAAGGACCTCACCTGGACTGAGGTaGGGTTTGGGTTCCCTGTTAGCATGGACTTTATTG | + |
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Preference number: 6 (lower is better) Translates to: KPHQQRTSPGLR*GLGSLLAWTLL Trigger: CAATAAAGTCCATGCTAACAGGGAACCCAAACCCAACCTCAGTCCAGGTGAGGTCCTTTGTTGATGTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS CAA 72 bp | GACACCACTTTAAGTACAGTGGCTGGTAGCAACTCCTaGGTGACCCTTCAGAATTATGAGAATCGGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DTTLSTVAGSNS*VTLQNYENRAK Trigger: CTTTGCCCGATTCTCATAATTCTGAAGGGTCACCAAGGAGTTGCTACCAGCCACTGTACTTAAAGTGGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546547.1 |
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| CDS TCA 72 bp | AACTATGAGGTACAGCCCAAGTCCCATGTCCTTCCATaGAGTGACTTCCATGTTCGCAGTAATTGGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: NYEVQPKSHVLP*SDFHVRSNWCD Trigger: ATCACACCAATTACTGCGAACATGGAAGTCACTTCATGGAAGGACATGGGACTTGGGCTGTACCTCATAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS GCA 72 bp | ACTGGTGTGAGATGGTATCTCGTTGTGGTTTTGATTTaGATTTCTCTGATGGCCAGTGATGATGAGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: TGVRWYLVVVLI*ISLMASDDEHF Trigger: AAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAACGAGATACCATCTCACACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS CCA 72 bp | TTCACTTTCATCGACTCCAAGAAATATGACCCTCTGTaGAACATAACAGTCACCTCCTCCATTTTCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FTFIDSKKYDPL*NITVTSSIFKS Trigger: GCTTTTGAAAATGGAGGAGGTGACTGTTATGTTCCACAGAGGGTCATATTTCTTGGAGTCGATGAAAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298699.7 ENST00000550553.5 ENST00000551944.1 |
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| CDS CCA 72 bp | ACTGCCCCAGATAGCCGAAGCATTTATATCCTCACCTaGTCCTTAAATACTTATTTTTCTCTGACATATCTA | + |
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Preference number: 6 (lower is better) Translates to: TAPDSRSIYILT*SLNTYFSLTYL Trigger: TAGATATGTCAGAGAAAAATAAGTATTTAAGGACCAGGTGAGGATATAAATGCTTCGGCTATCTGGGGCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551944.1 |
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| CDS CAA 72 bp | TTTCTCATTTTTCTCTCTCTCAACCTCCAGGTTTACTaGCTCCCATTTCTTCTTGGCTCTGGATATATCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLIFLSLNLQVY*LPFLLGSGYIF Trigger: AAAGATATATCCAGAGCCAAGAAGAAATGGGAGCAAGTAAACCTGGAGGTTGAGAGAGAGAAAAATGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298699.7 ENST00000550553.5 |
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