RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C12ORF43 (Homo sapiens)

Ensembl gene IDs: ENSG00000157895

Ensembl transcript IDs: ENST00000288757.7, ENST00000445832.7, ENST00000502891.6, ENST00000508193.2, ENST00000535367.1, ENST00000537817.5, ENST00000538296.5, ENST00000539736.5, ENST00000546272.5

Found 661 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTaGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA +
Preference number: 1 (lower is better)
Translates to: GQPGLLPLLGRLLRG*EVVLTPVGASQPVP
Trigger: TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CTGAAGGGGGCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATaGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCT +
Preference number: 1 (lower is better)
Translates to: LKGAAYDLGTPSLGL*RALGPLHHSGSHTS
Trigger: AGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 90 bp AGCAACCGTGGCCCTTCCTGGACAGCTGTGCCTCGCTCCCCACTCTaGTCTGATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCC +
Preference number: 1 (lower is better)
Translates to: SNRGPSWTAVPRSPL*SDASEREGSEAPQP
Trigger: GGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATCAGAGCAGAGTGGGGAGCGAGGCACAGCTGTCCAGGAAGGGCCACGGTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTaGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAG +
Preference number: 1 (lower is better)
Translates to: RPMTWAPPAWAYGEP*DRYTTLAATLLRTQ
Trigger: CTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CCCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTaGACAGCTGTGCCTCGCTCCCCACTCTGCTCTGATGCATCAGAA +
Preference number: 1 (lower is better)
Translates to: PCLEDLSLPSNRGPS*TAVPRSPLCSDASE
Trigger: TTCTGATGCATCAGAGCAGAGTGGGGAGCGAGGCACAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp TACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTaGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: YWEGYFGAGKSSLLL*EPRNPCQVQVLVGQ
Trigger: CTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 90 bp GTGGGTGTGGGTGCCTGGTGGGTGGCTAGCAGCCTTGTTTGCCTCTaGAGTGTCCTCCAGCAGCCTGGTGCTGTACCAGAGCTCAGACTC +
Preference number: 1 (lower is better)
Translates to: VGVGAWWVASSLVCL*SVLQQPGAVPELRL
Trigger: GAGTCTGAGCTCTGGTACAGCACCAGGCTGCTGGAGGACACTGCAGAGGCAAACAAGGCTGCTAGCCACCCACCAGGCACCCACACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CTGTCCTCACTGCTGGAGCTGGAGGGCTGTCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCACGGCCTCCAGGGACAGATGTGAAG +
Preference number: 1 (lower is better)
Translates to: LSSLLELEGCRFRRG*GDSSFSRPPGTDVK
Trigger: CTTCACATCTGTCCCTGGAGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 90 bp TCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCTATaGCTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTGGGACC +
Preference number: 1 (lower is better)
Translates to: SWDTVFLLGTEGGGL*LGHPQPGPMESPGT
Trigger: GGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR TCA 90 bp GGCCACTCCATGGGCGGCCGTGGACCCTGGCTGGGAGGCTCCCTTTaGAGAACCGAGGGTAGAGGTGTGACTTTGGGGTTCCTGTTATCT +
Preference number: 1 (lower is better)
Translates to: GHSMGGRGPWLGGSL*RTEGRGVTLGFLLS
Trigger: AGATAACAGGAACCCCAAAGTCACACCTCTACCCTCGGTTCTTCAAAGGGAGCCTCCCAGCCAGGGTCCACGGCCGCCCATGGAGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp GGTCATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACA +
Preference number: 1 (lower is better)
Translates to: GHEMFWNHSAPASPP*EHRGAGLDWSSHPT
Trigger: TGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR CCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATaGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTTCAGT +
Preference number: 1 (lower is better)
Translates to: ALPGGTKEPVNPGQA*SHIPGPAAENLAFS
Trigger: ACTGAAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CCAGGAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTACCTGTGTaGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: PGEERGDPRAQELPV*TGLTLRSLGAWLAE
Trigger: CTCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCACCTCTTTCTTCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp GACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTaGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC +
Preference number: 1 (lower is better)
Translates to: DTGLCSCDLLSSERP*ISVALFCHQCTHRA
Trigger: GGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp GGGGCTTCTCCAGTGTTCACACTAAGATGTACTCAGGCCACTCCATaGGCGGCCGTGGACCCTGGCTGGGAGGCTCCCTTTGAAGAACCG +
Preference number: 1 (lower is better)
Translates to: GASPVFTLRCTQATP*AAVDPGWEAPFEEP
Trigger: CGGTTCTTCAAAGGGAGCCTCCCAGCCAGGGTCCACGGCCGCCCATGGAGTGGCCTGAGTACATCTTAGTGTGAACACTGGAGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CACCTGACTTCTGCTTCTGGACTGTGGCCATGCTGGTGGGGGTGGTaGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTGGCTTTCT +
Preference number: 1 (lower is better)
Translates to: HLTSASGLWPCWWGW*QRQPSRHWPPSWLS
Trigger: AGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 90 bp TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTaGGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG +
Preference number: 1 (lower is better)
Translates to: CEPRTSMVPHPWACC*EPGLQCTASTLGFR
Trigger: CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp CAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTaGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCC +
Preference number: 1 (lower is better)
Translates to: QDKHGPTSLGLLLRT*PSVYRVYPGIQEKA
Trigger: GGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR TCA 90 bp AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTaGAGGGGGCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTAT +
Preference number: 1 (lower is better)
Translates to: RDCRCFVGYSLLTWN*RGRPMTWAPPAWAY
Trigger: ATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 90 bp ATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCCTCCTaGCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTA +
Preference number: 1 (lower is better)
Translates to: ICSQEHHASEASLAS*LYWEGYFGAGKSSL
Trigger: TAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 90 bp GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTaGCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTG +
Preference number: 1 (lower is better)
Translates to: VALFCHQCTHRATPS*PNSFQLVTHMPFVL
Trigger: CAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 90 bp TTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTaGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT +
Preference number: 1 (lower is better)
Translates to: FPVFVPKSIMPLRPA*PPASTGKATSGLGS
Trigger: ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 90 bp TGCCCATGGCTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTT +
Preference number: 1 (lower is better)
Translates to: CPWLGSVCRYSCSTL*WWEWRGLAGLLCLF
Trigger: AAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAGCCATGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CCA 90 bp CCATGGCTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTTCTT +
Preference number: 1 (lower is better)
Translates to: PWLGSVCRYSCSTLC*WEWRGLAGLLCLFL
Trigger: AAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR GCA 90 bp AGGCTCCAGCACCCACGCTCTCACACCCCACATCTCTGCTTTTCTTaGTCTGCTGAGACTCTAATGACAAAGCCAGATTTCATCTTAACC +
Preference number: 1 (lower is better)
Translates to: RLQHPRSHTPHLCFS*SAETLMTKPDFILT
Trigger: GGTTAAGATGAAATCTGGCTTTGTCATTAGAGTCTCAGCAGAGCAAGAAAAGCAGAGATGTGGGGTGTGAGAGCGTGGGTGCTGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR CCA 90 bp TGGCTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTTCTTCTT +
Preference number: 1 (lower is better)
Translates to: WLGSVCRYSCSTLCW*EWRGLAGLLCLFLL
Trigger: AAGAAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR GCA 90 bp GGCGAGTGGCACGTTTATTTAACTTTTAGTAAAGTCAAGGAGAAATaGGGTGGAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGT +
Preference number: 1 (lower is better)
Translates to: GEWHVYLTFSKVKEK*GGNFLLVHKSFRWG
Trigger: ACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTCCACCGCATTTCTCCTTGACTTTACTAAAAGTTAAATAAACGTGCCACTCGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR GCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: PPALRGSTEGQALIGLLTVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: TTAPPPALRGSTEGQALIGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp CCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTTGGGGCTCTAACGCCTaGGCCCAGGGAGGCCGAAGC +
Preference number: 2 (lower is better)
Translates to: PWDRYTTLAATLLRTQACWGSNA*AQGGRS
Trigger: GCTTCGGCCTCCCTGGGCTCAGGCGTTAGAGCCCCA...ACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR GCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PPALRGSTEGQALIGLLTGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR GCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGGGACGCCGACACAGCTaGCTCCCGGCACCGCCGCCA +
Preference number: 2 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVGRRHS*LPAPPP
Trigger: TGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCC...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: MKCSGTTAPPPALRGSTEVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGGCCAAGTCCAGGTCCTaGTGGGGCAGCTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPAKSRS*WGSSSV
Trigger: GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGC...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCT +
Preference number: 2 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGSTLCW*EWRGLA
Trigger: AGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCT...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGAGGAGTCTGAGGTCCTaGGCACTGCCAGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPRSLRS*ALPGGT
Trigger: TGTCCCTCCTGGCAGTGCTCAGGACCTCAGACTCCT...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR GCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAGCGCCCTGCAGACCCTaGCCTTGTTTGGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQAPCRP*PCLGQE
Trigger: CTCCTGCCCCAAACAAGGGCAGGGTCTGCAGGGCGC...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCACAGTTCTAGGGAGATaGAGGTTTCACCACTTGGCC +
Preference number: 2 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGTVLGR*RFHHLA
Trigger: GGCCAAGTGGTGAAACCTCCATCTCCCTAGAACTGT...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
3UTR-3UTR CCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAACTCAGGCCACTCCATaGGCGGCCGTGGACCCTGGC +
Preference number: 2 (lower is better)
Translates to: GAGRPEICCWQLWGVNSATQATP*AAVDPG
Trigger: GCCAGGGTCCACGGCCGCCCATGGAGTGGCCTGAGT...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CAA 90 bp AGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTaGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SCDLLSSERPWISVA*FCHQCTHRATPSCP
Trigger: GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: HEMFWNHSAPASPPWEHREGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: PPALRGSTEGQALIGLLTTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCTGGTCTCAAACTCCTaGCCTCAATTGATCCACCTC +
Preference number: 2 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSLVSNS*PQLIHL
Trigger: GAGGTGGATCAATTGAGGCCAGGAGTTTGAGACCAG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR CAA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTTGGAAATGCCTTGTCCCCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: QGLMGSLGLPAQSLN*EREVGLGNALSPGW
Trigger: CCACCCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR CAA 90 bp GGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCTATGACTaGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTA +
Preference number: 2 (lower is better)
Translates to: GIQSSYLELKGAAYD*GTPSLGLWRALGPL
Trigger: TAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CAA 90 bp ACTGTCCTCACTGCTGGAGCTGGAGGGCTGTCGCTTTCGGCGGGGTaGGGGAGACTCTTCCTTCTCACGGCCTCCAGGGACAGATGTGAA +
Preference number: 2 (lower is better)
Translates to: TVLTAGAGGLSLSAG*GRLFLLTASRDRCE
Trigger: TTCACATCTGTCCCTGGAGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGACTCCTGGCCTCAATTaGTCCACCTCCTTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPTPGLN*STSLAS
Trigger: AGAGGCCAAGGAGGTGGATCAATTGAGGCCAGGAGT...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAAGAGCATCATGCCTCTaGGGCCAGCCTGGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GAGRPEICCWQLWGVNSARASCL*GQPGLL
Trigger: CAGGAGGCCAGGCTGGCCTCAGAGGCATGATGCTCT...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGGAAGGGGGCGGCCTATaGCTTGGGCACCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: RPEICCWQLWGVNSAALREGGGL*LGHPQP
Trigger: AGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTC...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR GCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGGGGCAGGCCTTGATTaGTCTTCTCACCCTACAGCC +
Preference number: 2 (lower is better)
Translates to: PWDRYTTLAATLLRTQACGAGLD*SSHPTA
Trigger: GGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCC...ACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTAAGGTTCAGCATTaGCAGAGAGGCAATATCCAA +
Preference number: 2 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGLKVQH*QRGNIQ
Trigger: TTGGATATTGCCTCTCTGTCAATGCTGAACCTTAAG...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR TCA 90 bp CCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGGACAAAGGAGCCTGTaGACCCAGGACAAGCATGGT +
Preference number: 2 (lower is better)
Translates to: PWDRYTTLAATLLRTQACGQRSL*TQDKHG
Trigger: ACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCC...ACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAAGGAGAAGAAAGAGGTaGCCCCAGGGCACAGGAGCT +
Preference number: 2 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQRRRKR*PQGTGA
Trigger: AGCTCCTGTGCCCTGGGGTCACCTCTTTCTTCTCCT...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCGTGGTGAGAAGTGGGTaGACTCCAGATAGATGCACT +
Preference number: 2 (lower is better)
Translates to: PPALRGSTEGQALIGLLTVVRSG*TPDRCT
Trigger: AGTGCATCTATCTGGAGTTCACCCACTTCTCACCAC...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR GCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SGSHGQSGFASPVLELGEGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR GCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCTTGGCCTCTCAAAATaGTTGGATTACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSLGLSK*LDYRHE
Trigger: CTCATGCCTGTAATCCAAGCATTTTGAGAGGCCAAG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGPASPP*EHRGAG
Trigger: GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTATGGAGAGCCCTaGGACCGCTACACCACTCTG +
Preference number: 2 (lower is better)
Translates to: GAGRPEICCWQLWGVNSAAYGEP*DRYTTL
Trigger: CAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGC...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CAA 90 bp CGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: RASLHHHQGLMGSLG*PAQSLNLEREVGLG
Trigger: TCCAAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR TCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTAAGTCTTGGGTGGGGTaGACGCACAAATCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLKSWVG*THKSWG
Trigger: CCCCCAGGATTTGTGCGTTCACCCCACCCAAGACTT...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR TCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGGGAACTGGCCAAGCTaGGGTGCCCAGGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: GAGRPEICCWQLWGVNSAGNWPS*GAQEKK
Trigger: TTTCTTCTCCTGGGCACCTCAGCTTGGCCAGTTCCC...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp GACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCCCTCTCCCAGGCCCCATaGCCTCCAGCTTTCCTGTAT +
Preference number: 2 (lower is better)
Translates to: DFGVPVICCDPGGVALPPLSQAP*PPAFLY
Trigger: ATACAGGAAAGCTGGAGGTCATGGGGCCTGGGAGAG...GGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCACTTACGGCCTTCCACTaGTGTAGGAGGCCCACCCAT +
Preference number: 2 (lower is better)
Translates to: GAGRPEICCWQLWGVNSALTAFH*CRRPTH
Trigger: ATGGGTGGGCCTCCTACATCAGTGGAAGGCCGTAAG...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR GCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTTCACCCAGGCTGGACTaGAGTGGCATTATACAGCTC +
Preference number: 2 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPSPRLD*SGIIQL
Trigger: GAGCTGTATAATGCCACTGCAGTCCAGCCTGGGTGA...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGGTCATGAAATGTTCTaGAACCACAGCGCCCCCGCC +
Preference number: 2 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPGHEMF*NHSAPA
Trigger: GGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGTTGACAGAACATCTTTaGCTGCTGTGCAGCGTGAGA +
Preference number: 2 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGLTEHL*LLCSVR
Trigger: TCTCACGCTGCACAGCAGCCAAAGATGTTCTGTCAA...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR GCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTAGGTCTCCCTTCCCCTaGCCACCTCAGACAGTTCTA +
Preference number: 2 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLRSPFP*PPQTVL
Trigger: TAGAACTGTCTGAGGTGGGCAGGGGAAGGGAGACCT...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR GCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTGGGCGTGTGTCAACATaGTCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSGRVST*SANFCI
Trigger: AATACAAAAATTAGCTGAGCATGTTGACACACGCCC...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR GCA 90 bp CAGGTGGGGTGGGTGTGGGTGCCTGGTGGGTGGCTAGCAGCCTTGTTTGCCTCTCATTATACAGCTCACTaGAGCCTTGAACTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: QVGWVWVPGGWLAALFASHYTAH*SLELLD
Trigger: GTCCAGGAGTTCAAGGCTGCAGTGAGCTGTATAATG...AGAGGCAAACAAGGCTGCTAGCCACCCACCAGGCACCCACACCCACCCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR GCA 90 bp AGCTGTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCGTCACTGTCCTCACTaGTGGAGCTGGAGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: SCSTLCWWEWRGLAGLLCRHCPH*WSWRAV
Trigger: GACAGCCCTCCAGCTCCAGCAGTGAGGACAGTGACG...GCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CCA 90 bp TCCTTCTCCACTGTTCCAGGGCTGTGGATGGCTGACTCCTGTAGGATGTCGGACGGTCATGAAATGTTCTaGAACCACAGCGCCCCCGCC +
Preference number: 2 (lower is better)
Translates to: SFSTVPGLWMADSCRMSDGHEMF*NHSAPA
Trigger: GGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC...GTCCGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCTGCCTGAGGCTCGGTTaGGAGGTTGACAACTGGCTA +
Preference number: 2 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPCLRLG*EVDNWL
Trigger: TAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCA...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACTGCTATGACACTTCCTaGAGTCTTGGGTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHCYDTS*SLGWGE
Trigger: TTCACCCCACCCAAGACTTCAGGAAGTGTCATAGCA...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CCA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGACCAGGCTAAGGAGGTaGTGGGGAAGGTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: RPEICCWQLWGVNSAALRTRLRR*WGRSPF
Trigger: GAAGGGAGACCTTCCCCACCACCTCCTTAGCCTGGT...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAGGGTCCTCTGACAATTaGGTTTCCATAATCTGGTCG +
Preference number: 2 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQGSSDN*VSIIWS
Trigger: CGACCAGATTATGGAAACTCAATTGTCAGAGGACCC...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGCTTAAGGTTCAGCATTaGCAGAGAGGCAATATCCAA +
Preference number: 2 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPLKVQH*QRGNIQ
Trigger: TTGGATATTGCCTCTCTGTCAATGCTGAACCTTAAG...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGCAGCACCTGGGTTTTaGCAGAACATCTTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASAAPGF*QNIFGC
Trigger: GCAGCCAAAGATGTTCTGTCAAAACCCAGGTGCTGC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR GCA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCTCGCTCCCCACTCTaGTCTGATGCATCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: CDFGVPVICCDPGGVALPPRSPL*SDASER
Trigger: CCTTTCTGATGCATCAGAGCAGAGTGGGGAGCGAGG...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CAA 90 bp TACGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTTGCCATCTaGTTCATGCTCATTCACCTTATGCCTGAGGCTCGGTTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: YVGSEFRGGLKLVAI*FMLIHLMPEARLGG
Trigger: ACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp CTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTTCTTCCAGAGGGGCAGGCCTTaGTTGGTCTTCTCACCCTAC +
Preference number: 2 (lower is better)
Translates to: LFAGGNGEVSLAFFAFFFQRGRP*LVFSPY
Trigger: GTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTG...GAAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTTTTTTCCTGAGGTCATaGAATGTTCTGGAACCACAG +
Preference number: 2 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPFFLRS*NVLEPQ
Trigger: CTGTGGTTCCAGAACATTTCATGACCTCAGGAAAAA...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCTGCTATGACACTTCCTaGAGTCTTGGGTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASCYDTS*SLGWGE
Trigger: TTCACCCCACCCAAGACTTCAGGAAGTGTCATAGCA...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGAGCCTCCTGAGTAGCTaGGATTACGGGCGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLSLLSS*DYGRVS
Trigger: TGACACACGCCCGTAATCCCAGCTACTCAGGAGGCT...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGGCAACCTGCACCTCCTaGGTTCAAGCGATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLATCTS*VQAILP
Trigger: TGGGAGAATCGCTTGAACCCAGGAGGTGCAGGTTGC...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGCCATGTTGCCTAGGCTaGTCTGGAACTCGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLPCCLG*SGTRLK
Trigger: CTTGAGCCGAGTTCCAGACCAGCCTAGGCAACATGG...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACCAAGGAGAAATGCGGTaGAAACTTCTTGCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHQGEMR*KLLACP
Trigger: TGGACAAGCAAGAAGTTTCCACCGCATTTCTCCTTG...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp GTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTCAGCCGAGTCGACACTaGCCACCTTCTTGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: VALFAGGNGEVSLAFFAFQPSRH*PPSWLS
Trigger: AGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTG...AAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCTAGAAAGCCAGGGGTaGAAAAGCTCTCCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASLESQG*KSSPFS
Trigger: TGAGAAAGGAGAGCTTTTTCACCCCTGGCTTTCTAG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGGAGGTTTCACCACTTaGCCACTAGTCTCAAATAAC +
Preference number: 2 (lower is better)
Translates to: GAGRPEICCWQLWGVNSAGGFTT*PLVSNN
Trigger: GTTATTTGAGACTAGTGGCCAAGTGGTGAAACCTCC...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTACAGTTCTAGGGAGATaGAGGTTTCACCACTTGGCC +
Preference number: 2 (lower is better)
Translates to: CDFGVPVICCDPGGVALPTVLGR*RFHHLA
Trigger: GGCCAAGTGGTGAAACCTCCATCTCCCTAGAACTGT...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CCA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGGCCAGCCGGGGCGAGTaGCACGTTTATTTAACTTTT +
Preference number: 2 (lower is better)
Translates to: RPEICCWQLWGVNSAALRASRGE*HVYLTF
Trigger: AAAAGTTAAATAAACGTGCCACTCGCCCCGGCTGGC...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR TCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGAGTCCACGAGTGCTATaGCACTTCCTGAAGTCTTGG +
Preference number: 2 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLSPRVL*HFLKSW
Trigger: CCAAGACTTCAGGAAGTGTCATAGCACTCGTGGACT...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR TCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGAATGCCTTTGTCCCATaGAACCTAGTCCACGAGTGC +
Preference number: 2 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLNAFVP*NLVHEC
Trigger: GCACTCGTGGACTAGGTTTCATGGGACAAAGGCATT...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR TCA 90 bp CATGGCTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTGGTGGGAATGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGC +
Preference number: 2 (lower is better)
Translates to: HGWVQFAGIAVALFAGGNARLGG*QLAICS
Trigger: GCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGC...ATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR TCA 90 bp GTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTAATTCAGGGGTGGTCTaGAGCTCGTTGCCATCTTGT +
Preference number: 2 (lower is better)
Translates to: VALFAGGNGEVSLAFFAFNSGVV*SSLPSC
Trigger: ACAAGATGGCAACGAGCTTCAGACCACCCCTGAATT...AAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR GCA 90 bp CTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTTCTTCTGCTCATTCACCTTATaGCTGAGGCTCGGTTGGGAG +
Preference number: 2 (lower is better)
Translates to: LFAGGNGEVSLAFFAFFFCSFTL*LRLGWE
Trigger: CTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCA...GAAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCATTGATCCACCTCCTTaGCCTCTCAAAATGCTTGGA +
Preference number: 2 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASIDPPP*PLKMLG
Trigger: TCCAAGCATTTTGAGAGGCCAAGGAGGTGGATCAAT...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR CAA 90 bp TTGACAACTGGCTATTTGCAGCACCTGGGTTTTGACAGAACATCTTaGGCTGCTGTGCAGCGTGAGACTGTTGGGGCAAAGGCAGGAACA +
Preference number: 2 (lower is better)
Translates to: LTTGYLQHLGFDRTS*AAVQRETVGAKAGT
Trigger: TGTTCCTGCCTTTGCCCCAACAGTCTCACGCTGCACAGCAGCCAAAGATGTTCTGTCAAAACCCAGGTGCTGCAAATAGCCAGTTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR GCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCTACTTCTTGCAGAATaGCTTTGTCCCATGAAACCT +
Preference number: 2 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASLLLAE*LCPMKP
Trigger: AGGTTTCATGGGACAAAGGCATTCTGCAAGAAGTAG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CCA 90 bp AAGAAAAGGCGGAAACCATCATCCTCCAAAGCGACTTTCTGTACCTTAGCTTTTGATGCACTTTTAAGATaGAGTCAAGGCCGGGCGCGG +
Preference number: 2 (lower is better)
Translates to: KKRRKPSSSKATFCTLAFDALLR*SQGRAR
Trigger: CCGCGCCCGGCCTTGACTCCATCTTAAAAGTGCATC...AAAAGCTAAGGTACAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CCA 90 bp AAGAAAAGGCGGAAACCATCATCCTCCAAAGCGACTTTCTGTACCTTAGCTTTTTGGGAGGTTGACAACTaGCTATTTGCAGCACCTGGG +
Preference number: 2 (lower is better)
Translates to: KKRRKPSSSKATFCTLAFWEVDN*LFAAPG
Trigger: CCCAGGTGCTGCAAATAGCCAGTTGTCAACCTCCCA...AAAAGCTAAGGTACAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CAA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR CCA 72 bp TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTaGTGGGGCAGCTCCTCTGTCTCGAGCGCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: CGSLATRAKSRS*WGSSSVSSALQ
Trigger: CTGCAGGGCGCTCGAGACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp GCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATaGAGAGCCCTGGGACCGCTACACCACTCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: AAYDLGTPSLGL*RALGPLHHSGS
Trigger: GCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 3 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGTEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR CCA 72 bp ACTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTaGGACCGCTACACCACTCTGGCAGCCACACTTCTC +
Preference number: 3 (lower is better)
Translates to: TWAPPAWAYGEP*DRYTTLAATLL
Trigger: GAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp ACTCAGGCCACTCCATGGGCGGCCGTGGACCCTGGCTaGGAGGCTCCCTTTGAAGAACCGAGGGTAGAGGTG +
Preference number: 3 (lower is better)
Translates to: TQATPWAAVDPG*EAPFEEPRVEV
Trigger: CACCTCTACCCTCGGTTCTTCAAAGGGAGCCTCCCAGCCAGGGTCCACGGCCGCCCATGGAGTGGCCTGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp CTGGTGGGGGTGGTGGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTGGCTGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: LVGVVAATAESTLATFLAAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...AGCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CCA 72 bp ATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: MFWNHSAPASPP*EHRGAGLDWSS
Trigger: AGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR CCA 72 bp GTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTaGGGTGACCCGGCACCCCCTGCAGCTTGTAGCCAG +
Preference number: 3 (lower is better)
Translates to: VYRVYPGIQEKA*GDPAPPAACSQ
Trigger: CTGGCTACAAGCTGCAGGGGGTGCCGGGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTaGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTG +
Preference number: 3 (lower is better)
Translates to: GYFGAGKSSLLL*EPRNPCQVQVL
Trigger: CAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp CCGTGGAGGCTGCTCGGGGTGCACAGGAGGGGGTCGTaGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATG +
Preference number: 3 (lower is better)
Translates to: PWRLLGVHRRGS*RARSKACSWQM
Trigger: CATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGTGCACCCCGAGCAGCCTCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR TCA 72 bp ATGGGCGGCCGTGGACCCTGGCTGGGAGGCTCCCTTTaGAGAACCGAGGGTAGAGGTGTGACTTTGGGGTTC +
Preference number: 3 (lower is better)
Translates to: MGGRGPWLGGSL*RTEGRGVTLGF
Trigger: GAACCCCAAAGTCACACCTCTACCCTCGGTTCTTCAAAGGGAGCCTCCCAGCCAGGGTCCACGGCCGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 72 bp AAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTaGCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: KSSLLLWEPRNP*QVQVLVGQLLC
Trigger: ACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 72 bp GGTGCCTGGTGGGTGGCTAGCAGCCTTGTTTGCCTCTaGAGTGTCCTCCAGCAGCCTGGTGCTGTACCAGAG +
Preference number: 3 (lower is better)
Translates to: GAWWVASSLVCL*SVLQQPGAVPE
Trigger: CTCTGGTACAGCACCAGGCTGCTGGAGGACACTGCAGAGGCAAACAAGGCTGCTAGCCACCCACCAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp GGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTaGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAA +
Preference number: 3 (lower is better)
Translates to: GLLPLLGRLLRG*EVVLTPVGASQ
Trigger: TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR TCA 72 bp ACTGGCCAAGCTGAGGTGCCCAGGAGAAGAAAGAGGTaGCCCCAGGGCACAGGAGCTACCTGTGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: TGQAEVPRRRKR*PQGTGATCVDR
Trigger: CCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCACCTCTTTCTTCTCCTGGGCACCTCAGCTTGGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp CATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTaGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAG +
Preference number: 3 (lower is better)
Translates to: HGPTSLGLLLRT*PSVYRVYPGIQ
Trigger: CTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp CTGGTGGGGGTGGTGGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTGGCTTTTGACAGAACATCTTaGGCTGCTGTGCAGCGTGAG +
Preference number: 3 (lower is better)
Translates to: LVGVVAATAESTLATFLAFDRTS*AAVQRE
Trigger: CTCACGCTGCACAGCAGCCAAAGATGTTCTGTCAAA...AGCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 72 bp ACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCTATaGCTTGGGCACCCCCAGCCTGGGCCTATGGAGAGC +
Preference number: 3 (lower is better)
Translates to: TVFLLGTEGGGL*LGHPQPGPMES
Trigger: GCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR TCA 72 bp CGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTaGAGGGGGCGGCCTATGACTTGGGCACCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: RCFVGYSLLTWN*RGRPMTWAPPA
Trigger: GGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR GCA 72 bp TTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTaGCTCCCCATCCTGAGTACCCCTAGGGACAGGCAG +
Preference number: 3 (lower is better)
Translates to: FLLSAVIQEVWP*LPILSTPRDRQ
Trigger: CTGCCTGTCCCTAGGGGTACTCAGGATGGGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVMGSLG*PAQSLN
Trigger: GTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGACCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 3 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp GACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCCACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 3 (lower is better)
Translates to: DFGVPVICCDPGGVALPPTEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...GGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTaGGGAGTGAATTCTGCAGCCTTGAGGCAGAATTCC +
Preference number: 3 (lower is better)
Translates to: GAGRPEICCWQL*GVNSAALRQNS
Trigger: GGAATTCTGCCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp CTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTaGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC +
Preference number: 3 (lower is better)
Translates to: LCSCDLLSSERP*ISVALFCHQCT
Trigger: GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 3 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR-3UTR CAA 90 bp TCCTTCTCCACTGTTCCAGGGCTGTGGATGGCTGACTCCTGTAGGATGTCGGACCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 3 (lower is better)
Translates to: SFSTVPGLWMADSCRMSDPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...GTCCGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CAA 90 bp GTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTGCAGCGTGAGACTGTaGGGGCAAAGGCAGGAACAC +
Preference number: 3 (lower is better)
Translates to: VALFAGGNGEVSLAFFAFCSVRL*GQRQEH
Trigger: GTGTTCCTGCCTTTGCCCCAACAGTCTCACGCTGCA...AAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 72 bp TCTTCTTTTTGGTCCCAAGCGACACCTGGTCCCCGTTaGGCTCACCTGACTTCTGCTTCTGGACTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: SSFWSQATPGPR*AHLTSASGLWP
Trigger: TGGCCACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGACCAAAAAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CAA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGACACTTCCTGAAGTCTaGGGTGGGGTGAACGCACAA +
Preference number: 3 (lower is better)
Translates to: RPEICCWQLWGVNSAALRTLPEV*GGVNAQ
Trigger: TTGTGCGTTCACCCCACCCAAGACTTCAGGAAGTGT...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR-3UTR CAA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGCCTTTTTCTTCTTTTaGGTCCCAAGCGACACCTGG +
Preference number: 3 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASAFFFF*VPSDTW
Trigger: CCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR GCA 72 bp AGCACCTGGGTTTTGACAGAACATCTTTGGCTGCTGTaGAGCGTGAGACTGTTGGGGCAAAGGCAGGAACAC +
Preference number: 3 (lower is better)
Translates to: STWVLTEHLWLL*SVRLLGQRQEH
Trigger: GTGTTCCTGCCTTTGCCCCAACAGTCTCACGCTGCACAGCAGCCAAAGATGTTCTGTCAAAACCCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CCA 72 bp CCAGCTTCTTGGCTACGTGGGCTCGGAATTCAGGGGTaGTCTGAAGCTCGTTGCCATCTTGTTCATGCTCAT +
Preference number: 3 (lower is better)
Translates to: PASWLRGLGIQG*SEARCHLVHAH
Trigger: ATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 72 bp CTGTACCTTAGCTTTTGCTGGCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGTCCAGCAGGGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: LYLSFCWLLCCF*DGNEAVQQGSQ
Trigger: CTGGGAGCCCTGCTGGACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR GCA 72 bp CTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: LGSVCRYSCSTL*WWEWRGLAGLL
Trigger: AAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CCA 72 bp TTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTaGGATACAGTCTTCTTACTTGGAACTGAAGGGGGC +
Preference number: 3 (lower is better)
Translates to: FMADVGGTVAAS*DTVFLLGTEGG
Trigger: GCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp GGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: GSVCRYSCSTLC*WEWRGLAGLLC
Trigger: GCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CAA 90 bp CATGGCTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTGGTGGGAATACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 3 (lower is better)
Translates to: HGWVQFAGIAVALFAGGNTEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...ATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CAA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGCAGCTCACTGCAGCCTaGAACTCCTGGACTAAAGGG +
Preference number: 3 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGQLTAA*NSWTKG
Trigger: CCCTTTAGTCCAGGAGTTCAAGGCTGCAGTGAGCTG...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR-3UTR CAA 90 bp GTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTGCAGCACCTGGGTTTaGACAGAACATCTTTGGCTG +
Preference number: 3 (lower is better)
Translates to: VALFAGGNGEVSLAFFAFCSTWV*TEHLWL
Trigger: CAGCCAAAGATGTTCTGTCAAAACCCAGGTGCTGCA...AAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR-3UTR CAA 90 bp GACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCCGTGGAAACTTCTTGCTaGTCCACAAATCATTCAGAT +
Preference number: 3 (lower is better)
Translates to: DFGVPVICCDPGGVALPPVETSC*STNHSD
Trigger: ATCTGAATGATTTGTGGACAAGCAAGAAGTTTCCAC...GGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp TCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTT +
Preference number: 3 (lower is better)
Translates to: SVCRYSCSTLCW*EWRGLAGLLCL
Trigger: AAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CCA 72 bp AGTGAATTCTGCAGCCTTGAGGCAGAATTCCTTCTCTaGGAAACCGGTTTTTGCTCTTACGGCCTTCCACTG +
Preference number: 3 (lower is better)
Translates to: SEFCSLEAEFLL*ETGFCSYGLPL
Trigger: CAGTGGAAGGCCGTAAGAGCAAAAACCGGTTTCCCAGAGAAGGAATTCTGCCTCAAGGCTGCAGAATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CCA 72 bp TGGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTaGCTTTCTTTTTCAACTTCCTTTTCTTCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: WQRQPSRHWPPS*LSFSTSFSSLP
Trigger: AGGCAAAGAAGAAAAGGAAGTTGAAAAAGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CCA 72 bp TGCAGGTATAGCTGTAGCACTCTTTGCTGGTGGGAATaGAGAGGTCTCGCTGGCCTTCTTTGCCTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: CRYSCSTLCWWE*RGLAGLLCLFL
Trigger: AAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR GCA 72 bp CTTCTTGGCTTTCTTTTTCAACTTCCTTTTCTTCTTTaGCTCCTTCTCCACTGTTCCAGGGCTGTGGATGGC +
Preference number: 3 (lower is better)
Translates to: LLGFLFQLPFLL*LLLHCSRAVDG
Trigger: GCCATCCACAGCCCTGGAACAGTGGAGAAGGAGGCAAAGAAGAAAAGGAAGTTGAAAAAGAAAGCCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 72 bp GAGTCTGCTGCAGTAATTGATGTGGTGAGAAGTGGGTaGACTCCAGATAGATGCACTTTTAAGATGGAGTCA +
Preference number: 3 (lower is better)
Translates to: ESAAVIDVVRSG*TPDRCTFKMES
Trigger: TGACTCCATCTTAAAAGTGCATCTATCTGGAGTTCACCCACTTCTCACCACATCAATTACTGCAGCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR TCA 72 bp GAGGATGTTTACTTAAAATGTCTTAAGGTTCAGCATTaGCAGAGAGGCAATATCCAAATCACTCTAAGTTTT +
Preference number: 3 (lower is better)
Translates to: EDVYLKCLKVQH*QRGNIQITLSF
Trigger: AAAACTTAGAGTGATTTGGATATTGCCTCTCTGTCAATGCTGAACCTTAAGACATTTTAAGTAAACATCCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGCCCCAAGCCGGCATTaGCGCCTCGCGGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPAPSRH*RLAAPL
Trigger: GAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGC...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCGGACGCCGACACAGCTaGCTCCCGGCACCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAGRRHS*LPAPPP
Trigger: TGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCC...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAATCGR*SKPQAG
Trigger: GCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGC...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLPASPP*EHRGAG
Trigger: GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGGGGCTCTAACGCCTaGGCCCAGGGAGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAWGSNA*AQGGRS
Trigger: GCTTCGGCCTCCCTGGGCTCAGGCGTTAGAGCCCCA...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGGCTTCCCTGCCACGTaGGGGCGTTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPGFPAT*GRCSKP
Trigger: GGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCC...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCGGCTTCCCTGCCACGTaGGGGCGTTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAGFPAT*GRCSKP
Trigger: GGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCC...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSPASPP*EHRGAG
Trigger: GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCGGACGCCGACACAGCTaGCTCCCGGCACCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGGRRHS*LPAPPP
Trigger: TGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCC...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GCTGGTGGGGGTGGTGGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTGGCGGACGCCGACACAGCTaGCTCCCGGCACCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: AGGGGGSDSRVDTGHLLGGRRHS*LPAPPP
Trigger: TGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCC...GCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCCCCAGCCTGGGCCTATaGAGAGCCCTGGGACCGCTA +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAPSLGL*RALGPL
Trigger: TAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGG...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCGGAACTCGGCTCAAGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAGTRLK*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACTTGAGCCGAGTTCC...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTCCTGCCTCCCCATCCTaGGTACCCCTAGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIPASPS*VPLGTG
Trigger: GCCTGTCCCTAGGGGTACTCAGGATGGGGAGGCAGG...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSGSWLP*HVRALL
Trigger: GAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCC...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCGGCTCACTGCAACCTaGACCTCCTGGGTTCAAGCG +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPRLTAT*TSWVQA
Trigger: CGCTTGAACCCAGGAGGTGCAGGTTGCAGTGAGCCG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGCGCCCTGCAGACCCTaGCCTTGTTTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIAPCRP*PCLGQE
Trigger: CTCCTGCCCCAAACAAGGGCAGGGTCTGCAGGGCGC...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCCATGCTGGTGGGGGTaGTGGCAGCGACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSPCWWG*WQRQPS
Trigger: ACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCGCCTGGGGGCCTGGCTaGCTGAGGGCAGTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPALRGSTEGQALIGLLTAWGPG*LRAVRS
Trigger: GCTGCGAACTGCCCTCAGCCAGCCAGGCCCCCAGGC...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGCCAAGTCCAGGTCCTaGTGGGGCAGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLAKSRS*WGSSSV
Trigger: GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGC...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGGTGTGGGTGCCTGGTaGGTGGCTAGCAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPGVGAW*VASSLV
Trigger: AACAAGGCTGCTAGCCACCCACCAGGCACCCACACC...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCCACTGTCCTCACTGCTaGAGCTGGAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAHCPHC*SWRAVA
Trigger: AGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGTG...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCAGAGGGGCAGGCCTTaGTTGGTCTTCTCACCCTAC +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPQRGRP*LVFSPY
Trigger: GTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTCCGAATCGCTCACTGTaGCACTGGGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIPNRSL*HWAPPS
Trigger: AGATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGG...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPATCGR*SKPQAG
Trigger: GCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGC...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGACGCCGACACAGCTaGCTCCCGGCACCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTEGRRHS*LPAPPP
Trigger: TGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCC...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR GCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCAGGAGGTGTGGCCCTaGCTCCCCATCCTGAGTACC +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSQEVWP*LPILST
Trigger: GGTACTCAGGATGGGGAGGCAGGGCCACACCTCCTG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTTGTCCTCACTGGAGCTaGAGGGCTGTCGCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLCPHWS*RAVAFG
Trigger: GCCGAAAGCGACAGCCCTCCAGCTCCAGTGAGGACA...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCGGGGCAGGCCTTGATTaGTCTTCTCACCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAGAGLD*SSHPTA
Trigger: GGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCC...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCTGCTGCTGAGAACCTaGCCTTCAGTGTACCGCGTC +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPLLLRT*PSVYRV
Trigger: GACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCTGGGTGCCTGGTGGGTaGCTAGCAGCCTTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGWVPGG*LAALFA
Trigger: GGCAAACAAGGCTGCTAGCCACCCACCAGGCACCCA...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTAAGTCTTGGGTGGGGTaGACGCACAAATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLKSWVG*THKSWG
Trigger: CCCCCAGGATTTGTGCGTTCACCCCACCCAAGACTT...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCGCAATCTCGGCTCACTaGAACCTGCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGAISAH*NLHLLG
Trigger: ACCCAGGAGGTGCAGGTTGCAGTGAGCCGAGATTGC...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCAGCCGAGTCGACACTaGCCACCTTCTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPQPSRH*PPSWLS
Trigger: AGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTGTCCCAAGCGACACCTaGTCCCCGTTGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSVPSDT*SPLSSP
Trigger: AGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGAC...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQATIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQPASPP*EHRGAG
Trigger: GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGGTCATGAAATGTTCTaGAACCACAGCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLGHEMF*NHSAPA
Trigger: GGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCCATGTTGCCTAGGCTaGTCTGGAACTCGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPPCCLG*SGTRLK
Trigger: CTTGAGCCGAGTTCCAGACCAGCCTAGGCAACATGG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTAAGTCTTGGGTGGGGTaGACGCACAAATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIKSWVG*THKSWG
Trigger: CCCCCAGGATTTGTGCGTTCACCCCACCCAAGACTT...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACAGAGCATCATGCCTCTaGGGCCAGCCTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHRASCL*GQPGLL
Trigger: CAGGAGGCCAGGCTGGCCTCAGAGGCATGATGCTCT...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCCGAATCGCTCACTGTaGCACTGGGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PPALRGSTEGQALIGLLTPNRSL*HWAPPS
Trigger: AGATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGG...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TGTCCAGCAGGGCTCCCAGCTTCTTGGCTACGTGGGCTCGGAATTCAGGGGTGGGGCTTCCCTGCCACGTaGGGGCGTTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPAGLPASWLRGLGIQGWGFPAT*GRCSKP
Trigger: GGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCC...CCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCTGCTGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPGSWLP*HVRALL
Trigger: GAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCC...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGCTCATTCACCTTATaGCTGAGGCTCGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQACSFTL*LRLGWE
Trigger: CTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCA...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACGAGCCTCGCAACCCGTaGCAAGTCCAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHEPRNP*QVQVLV
Trigger: CACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTC...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTAGCTTCTTGGCTACGTaGGCTCGGAATTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLSFLAT*ARNSGV
Trigger: CACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCT...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSRFRRG*GDSSFS
Trigger: TGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCTGTCCTCACTGGAGCTaGAGGGCTGTCGCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGCPHWS*RAVAFG
Trigger: GCCGAAAGCGACAGCCCTCCAGCTCCAGTGAGGACA...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS-3UTR CCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTCTTTGCTGGTGGGAATaGAGAGGTCTCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLLCWWE*RGLAGL
Trigger: AAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAG...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQASTLCW*EWRGLA
Trigger: AGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCT...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPSTLCW*EWRGLA
Trigger: AGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCT...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCCCTGTGCCCATGGCTaGGTTCAGTTTGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPPCAHG*VQFAGI
Trigger: TATACCTGCAAACTGAACCCAGCCATGGGCACAGGG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGGGCAGGCCTTGATTaGTCTTCTCACCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIGAGLD*SSHPTA
Trigger: GGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCC...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPPASPP*EHRGAG
Trigger: GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCCATGTTGCCTAGGCTaGTCTGGAACTCGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGPCCLG*SGTRLK
Trigger: CTTGAGCCGAGTTCCAGACCAGCCTAGGCAACATGG...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACAGGCGCCCCAACCCGTaGAGGCTGCTCGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHRRPNP*RLLGVH
Trigger: GTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCT...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTACCTGAGGCTCGGTTaGGAGGTTGACAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAYLRLG*EVDNWL
Trigger: TAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGTA...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGGGGGCCTGGCTGGCTaGGGGCAGTTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASGGLAG*GQFAAT
Trigger: GGTGGCTGCGAACTGCCCTCAGCCAGCCAGGCCCCC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCAAGGCCCGAGCAGCTaGGCAGGGCCGGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPQGPSS*AGPGNW
Trigger: CCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGTGGGGCAGGAGTAGCTaGGCTCACAAGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGWGRSS*AHKAAR
Trigger: CCTTGCTGCCTTGTGAGCTCAGCTACTCCTGCCCCA...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACGAAGGGGGCGGCCTATaGCTTGGGCACCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHEGGGL*LGHPQP
Trigger: AGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTC...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTCCTGCCTGGAGGACCTaGGCCTGCCGAGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATPAWRT*ACRATV
Trigger: CACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGG...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCTGGGCGCCGCCATCTTaGACCACCGCAAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGWAPPS*TTAKDC
Trigger: ACAATCCTTTGCGGTGGTTCAAGATGGCGGCGCCCA...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR TCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTAAAGTGCATAGTACCTaGGGCTCGGTTGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLKVHST*GSVGRL
Trigger: CAACCTCCCAACCGAGCCTCAGGTACTATGCACTTT...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR GCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERATCGR*SKPQAG
Trigger: GCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGC...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGACGCCGACACAGCTaGCTCCCGGCACCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLGRRHS*LPAPPP
Trigger: TGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCC...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACCCAACCCGTGGAGGCTaGTCGGGGTGCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHPTRGG*SGCTGG
Trigger: CCCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGG...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCGTCACTGTCCTCACTaGTGGAGCTGGAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHRHCPH*WSWRAV
Trigger: GACAGCCCTCCAGCTCCAGCAGTGAGGACAGTGACG...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGTGCAGCACCGGCTCTTaGCTTCCCTGCCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTECSTGS*LPCHVR
Trigger: CCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCA...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTACTGTTCCAGGGCTGTaGATGGCTGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSTVPGL*MADSCR
Trigger: CCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGT...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPCSTLC*WEWRGL
Trigger: GAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACA...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALITIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCGGGGCAGGCCTTGATTaGTCTTCTCACCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGGAGLD*SSHPTA
Trigger: GGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCC...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCACAGTTCTAGGGAGATaGAGGTTTCACCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQATVLGR*RFHHLA
Trigger: GGCCAAGTGGTGAAACCTCCATCTCCCTAGAACTGT...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCCAGGCATTTCCTGGGTaGCTACTCTGTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGQAFPG*LLCARA
Trigger: GGCTCTGGCACAGAGTAGCCACCCAGGAAATGCCTG...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTCTAGAAAGCCAGGGGTaGAAAAGCTCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPLESQG*KSSPFS
Trigger: TGAGAAAGGAGAGCTTTTTCACCCCTGGCTTTCTAG...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGATCGR*SKPQAG
Trigger: GCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGC...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCCTGTACCTTAGCTTTTaGTGGCTCCTTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQALYLSF*WLLCCF
Trigger: GAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGCAGCACCGGCTCTTaGCTTCCCTGCCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATCSTGS*LPCHVR
Trigger: CCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCA...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCTGCCTGAGGCTCGGTTaGGAGGTTGACAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGCLRLG*EVDNWL
Trigger: TAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCA...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000546272.5
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTCTCGGAATTCAGGGGTaGTCTGAAGCTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALILGIQG*SEARCH
Trigger: ATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAG...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGCTTCTTGGCTACGTaGGCTCGGAATTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGSFLAT*ARNSGV
Trigger: CACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCT...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGGGCTCCCAGCTTCTTaGCTACGTGGGCTCGGAATT +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGGLPAS*LRGLGI
Trigger: AATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCC...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCATGGAGAGGTCTCGCTaGCCTTCTTTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAMERSR*PSLPFS
Trigger: AGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCAT...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCCTTTGCTGGTGGGAATaGAGAGGTCTCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGLCWWE*RGLAGL
Trigger: AAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAG...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTCCCTGTGCCCATGGCTaGGTTCAGTTTGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIPCAHG*VQFAGI
Trigger: TATACCTGCAAACTGAACCCAGCCATGGGCACAGGG...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGTGGGGGTGGTGGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTGGCTGGTCATGAAATGTTCTaGAACCACAGCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LVGVVAATAESTLATFLAGHEMF*NHSAPA
Trigger: GGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC...AGCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGACCAGGCTAAGGAGGTaGTGGGGAAGGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGTRLRR*WGRSPF
Trigger: GAAGGGAGACCTTCCCCACCACCTCCTTAGCCTGGT...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCACCAGGCTAAGGAGGTaGTGGGGAAGGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPALRGSTEGQALIGLLTTRLRR*WGRSPF
Trigger: GAAGGGAGACCTTCCCCACCACCTCCTTAGCCTGGT...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTATTCAGGAAAAGGCCTaGGGTGACCCGGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPIQEKA*GDPAPP
Trigger: AGGGGGTGCCGGGTCACCCCAGGCCTTTTCCTGAAT...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTGCCTCCTGCCTCTACTaGGAAGGCTACTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPASCLY*EGYFGA
Trigger: AGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGC...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCTCCATGGGCGGCCGTaGACCCTGGCTGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLLHGRP*TLAGRL
Trigger: GAGCCTCCCAGCCAGGGTCCACGGCCGCCCATGGAG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGACCTCACTGCTGGAGCTaGAGGGCTGTCGCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRPHCWS*RAVAFG
Trigger: GCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGG...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445832.7
ENST00000546272.5
CDS-3UTR TCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHARLGG*QLAICS
Trigger: GCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGC...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTCTCCAGGGACAGATGTaGAGAAAAGGCGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALILQGQM*RKGGNH
Trigger: ATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAG...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR TCA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCGGGTCCTCTGACAATTaGGTTTCCATAATCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGGSSDN*VSIIWS
Trigger: CGACCAGATTATGGAAACTCAATTGTCAGAGGACCC...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGAGGAGAAGAAAGAGGTaGCCCCAGGGCACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPRRRKR*PQGTGA
Trigger: AGCTCCTGTGCCCTGGGGTCACCTCTTTCTTCTCCT...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCCAGAAAGGGAGGGCTCTaGGGCGCCCCAACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: DFGVPVICCDPGGVALPPRKGGL*GAPTRG
Trigger: TCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCT...GGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGGCTTCCCTGCCACGTaGGGGCGTTGCTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGGFPAT*GRCSKP
Trigger: GGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCC...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPGSWLP*HVRALL
Trigger: GAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCC...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTCGGCTCACTGCAACCTaGACCTCCTGGGTTCAAGCG +
Preference number: 4 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPRLTAT*TSWVQA
Trigger: CGCTTGAACCCAGGAGGTGCAGGTTGCAGTGAGCCG...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACACTGTTCCAGGGCTGTaGATGGCTGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHTVPGL*MADSCR
Trigger: CCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGT...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGTCCCAAGCGACACCTaGTCCCCGTTGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTEVPSDT*SPLSSP
Trigger: AGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGAC...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGTCCCAAGCGACACCTaGTCCCCGTTGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRVPSDT*SPLSSP
Trigger: AGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGAC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGCTTTGCTGGTGGGAATaGAGAGGTCTCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGLCWWE*RGLAGL
Trigger: AAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAG...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSCSTLC*WEWRGL
Trigger: GAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACA...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTGGGGCAGGCCTTGATTaGTCTTCTCACCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPGAGLD*SSHPTA
Trigger: GGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCC...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TTCTCACGGCCTCCAGGGACAGATGTGAAGAAAAGGCGGAAACCATCATCCTCCCCCGCCAGCCCTCCGTaGGAGCACAGAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FSRPPGTDVKKRRKPSSSPASPP*EHRGAG
Trigger: GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG...GGAGGATGATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAGGCCGTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CCA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTGGAGGTTTCACCACTTaGCCACTAGTCTCAAATAAC +
Preference number: 4 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPGGFTT*PLVSNN
Trigger: GTTATTTGAGACTAGTGGCCAAGTGGTGAAACCTCC...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTCTGGTCTCAAACTCCTaGCCTCAATTGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALILVSNS*PQLIHL
Trigger: GAGGTGGATCAATTGAGGCCAGGAGTTTGAGACCAG...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGAGCCTCCTGAGTAGCTaGGATTACGGGCGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGSLLSS*DYGRVS
Trigger: TGACACACGCCCGTAATCCCAGCTACTCAGGAGGCT...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGCCGTGGACCCTGGCTaGGAGGCTCCCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPAVDPG*EAPFEE
Trigger: TTCTTCAAAGGGAGCCTCCCAGCCAGGGTCCACGGC...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTCCTCACTGCTGGAGCTaGAGGGCTGTCGCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATPHCWS*RAVAFG
Trigger: GCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGG...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPARLGG*QLAICS
Trigger: GCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGC...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSLLCCF*DGNEAV
Trigger: GACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTCCCGTTGAGCTCACCTaGCTTCTGCTTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPPVELT*LLLLDC
Trigger: ACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGGG...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp ATGAAGCTGTCCAGCAGGGCTCCCAGCTTCTTGGCTACGTGGGCTCGGAATTCAGTCCTTGGAGCTGGCTaGGCCCTGTGCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: MKLSSRAPSFLATWARNSVLGAG*ALCPWL
Trigger: CAGCCATGGGCACAGGGCTCAGCCAGCTCCAAGGAC...TGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCTGCTGGACAGCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGCAGAGGGGCAGGCCTTaGTTGGTCTTCTCACCCTAC +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTEQRGRP*LVFSPY
Trigger: GTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTG...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR TCA 90 bp TGTCCAGCAGGGCTCCCAGCTTCTTGGCTACGTGGGCTCGGAATTCAGGGGTGGCAGAGGGGCAGGCCTTaGTTGGTCTTCTCACCCTAC +
Preference number: 4 (lower is better)
Translates to: CPAGLPASWLRGLGIQGWQRGRP*LVFSPY
Trigger: GTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTG...CCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCTGCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTTTTCCTGAGGTCATaGAATGTTCTGGAACCACAG +
Preference number: 4 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAFFLRS*NVLEPQ
Trigger: CTGTGGTTCCAGAACATTTCATGACCTCAGGAAAAA...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR TCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGCTCTCCCAGGCCCCATaGCCTCCAGCTTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTELSQAP*PPAFLY
Trigger: ATACAGGAAAGCTGGAGGTCATGGGGCCTGGGAGAG...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGCCGAATCGCTCACTGTaGCACTGGGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERPNRSL*HWAPPS
Trigger: AGATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGG...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGGSWLP*HVRALL
Trigger: GAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCC...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCTGTACCTTAGCTTTTaGTGGCTCCTTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSLYLSF*WLLCCF
Trigger: GAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTAGGTCTCCCTTCCCCTaGCCACCTCAGACAGTTCTA +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPRSPFP*PPQTVL
Trigger: TAGAACTGTCTGAGGTGGGCAGGGGAAGGGAGACCT...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACTCACCCAGGCTGGACTaGAGTGGCATTATACAGCTC +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHSPRLD*SGIIQL
Trigger: GAGCTGTATAATGCCACTGCAGTCCAGCCTGGGTGA...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTCGTCACTGTCCTCACTaGTGGAGCTGGAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATRHCPH*WSWRAV
Trigger: GACAGCCCTCCAGCTCCAGCAGTGAGGACAGTGACG...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGATGCAGCACCGGCTCTTaGCTTCCCTGCCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGCSTGS*LPCHVR
Trigger: CCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCA...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGCCATGCTGGTGGGGGTaGTGGCAGCGACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLPCWWG*WQRQPS
Trigger: ACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGG...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCATGCTGGTGGGGGTaGTGGCAGCGACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASPCWWG*WQRQPS
Trigger: ACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTCCTGACTTCTGCTTCTaGACTGTGGCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPPDFCF*TVAMLV
Trigger: CACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGG...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHSTLCW*EWRGLA
Trigger: AGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCT...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCCTGTGCCCATGGCTaGGTTCAGTTTGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHPCAHG*VQFAGI
Trigger: TATACCTGCAAACTGAACCCAGCCATGGGCACAGGG...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTaGTCTTCTCACCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRGAGLD*SSHPTA
Trigger: GGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGACCGCTACACCACTCTaGCAGCCACACTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPTATPL*QPHFSG
Trigger: TCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGT...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTTGGGCACCCCCAGCCTaGGCCTATGGAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFWAPPA*AYGEPW
Trigger: CCAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCA...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGAGTAACCACGGCACCTaGGCCCTGGGGCCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVSNHGT*ALGPVL
Trigger: CAGTACAGGCCCCAGGGCCCAGGTGCCGTGGTTACT...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGTGGGTGTGGGTGCCTaGTGGGTGGCTAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLVGVGA*WVASSL
Trigger: AAGGCTGCTAGCCACCCACCAGGCACCCACACCCAC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTACTCAGGCCACTCCATaGGCGGCCGTGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CDFGVPVICCDPGGVALPTQATP*AAVDPG
Trigger: GCCAGGGTCCACGGCCGCCCATGGAGTGGCCTGAGT...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CAA 72 bp TCTTCTTACTTGGAACTGAAGGGGGCGGCCTATGACTaGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSYLELKGAAYD*GTPSLGLWRAL
Trigger: CAGGGCTCTCCATAGGCCCAGGCTGGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GCTGGTGGGGGTGGTGGCAGCGACAGCCGAGTCGACACTGGCCACCTTCTTGGCCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGGGGGSDSRVDTGHLLGLLCCF*DGNEAV
Trigger: GACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAG...GCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGCTCCAGGGACAGATGTaGAGAAAAGGCGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGLQGQM*RKGGNH
Trigger: ATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAG...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR TCA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTTTTTTCCTGAGGTCATaGAATGTTCTGGAACCACAG +
Preference number: 4 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLFFLRS*NVLEPQ
Trigger: CTGTGGTTCCAGAACATTTCATGACCTCAGGAAAAA...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR TCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCGGGTCCTCTGACAATTaGGTTTCCATAATCTGGTCG +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGGSSDN*VSIIWS
Trigger: CGACCAGATTATGGAAACTCAATTGTCAGAGGACCC...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTTCCTGTTATCTGCTGTaGTCCAGGAGGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPSCYLL*SRRCGP
Trigger: AGGGCCACACCTCCTGGATCACAGCAGATAACAGGA...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp AGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKPSSPSGSHGQSGFASPGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...TGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAGCAATCTCGGCTCACTaGAACCTGCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQAISAH*NLHLLG
Trigger: ACCCAGGAGGTGCAGGTTGCAGTGAGCCGAGATTGC...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGCCAGAGCCACCTGCTaGCATCCAACCACAGCGTCA +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPARATC*HPTTAS
Trigger: TGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGC...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTCCTCCAGCAGCCTGGTaGTGTACCAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATPPAAW*CTRAQT
Trigger: AGTCTGAGCTCTGGTACAGCACCAGGCTGCTGGAGG...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTCGTCACTGTCCTCACTaGTGGAGCTGGAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLRHCPH*WSWRAV
Trigger: GACAGCCCTCCAGCTCCAGCAGTGAGGACAGTGACG...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHRFRRG*GDSSFS
Trigger: TGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCG...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTCCATGCTGGTGGGGGTaGTGGCAGCGACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFPCWWG*WQRQPS
Trigger: ACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGG...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGTCCCAAGCGACACCTaGTCCCCGTTGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQVPSDT*SPLSSP
Trigger: AGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGAC...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PPALRGSTEGQALIGLLTCSTLC*WEWRGL
Trigger: GAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACA...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHCSTLC*WEWRGL
Trigger: GAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACA...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGGGACACCTTGTCCTTaGAGCTGGCTGAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLGTPCP*SWLSPV
Trigger: CACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGGGCCTTGGCCTCTTaGGGATCCCTTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPWALAS*GSLLSF
Trigger: AAATGAGAGAAGGGATCCCCAAGAGGCCAAGGCCCA...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTATTGATCCACCTCCTTaGCCTCTCAAAATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALIIDPPP*PLKMLG
Trigger: TCCAAGCATTTTGAGAGGCCAAGGAGGTGGATCAAT...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAAACCCAGGACAAGCATaGTCCCACATCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQNPGQA*SHIPGP
Trigger: AGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTT...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTAGAAGCCTGGGGGCCTaGCTGGCTGAGGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: CDFGVPVICCDPGGVALPRSLGA*LAEGSS
Trigger: CGAACTGCCCTCAGCCAGCCAGGCCCCCAGGCTTCT...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCGCCTATGGAGAGCCCTaGGACCGCTACACCACTCTG +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSAYGEP*DRYTTL
Trigger: CAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGC...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCACAGGAGGGGGTCGTaGAGAGCTAGGAGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQHRRGS*RARSKA
Trigger: GGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGTG...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGCCTGCCGAGCAACCGTaGCCCTTCCTGGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLPAEQP*PFLDSC
Trigger: ACAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGG...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCACAGAGGGGCAGGCCTTaGTTGGTCTTCTCACCCTAC +
Preference number: 4 (lower is better)
Translates to: GAGRPEICCWQLWGVNSAQRGRP*LVFSPY
Trigger: GTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTG...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCAGAGGGGCAGGCCTTaGTTGGTCTTCTCACCCTAC +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQQRGRP*LVFSPY
Trigger: GTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTG...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCACCATCCCTGGCCATaGGCTTCTACTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PPALRGSTEGQALIGLLTHHPWP*ASTSFL
Trigger: AAGAAAAGAAGTAGAAGCTCATGGCCAGGGATGGTG...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTGGAACTCGGCTCAAGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFGTRLK*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACTTGAGCCGAGTTCC...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGGGAACTGGCCAAGCTaGGGTGCCCAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPGNWPS*GAQEKK
Trigger: TTTCTTCTCCTGGGCACCTCAGCTTGGCCAGTTCCC...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGTGCTCATTCACCTTATaGCTGAGGCTCGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTECSFTL*LRLGWE
Trigger: CTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCA...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000546272.5
CDS-3UTR GCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPSCSTL*WWEWRG
Trigger: ACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCT...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGTGGCTGGGTTCAGTTTaGAGGTATAGCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGWLGSV*RYSCST
Trigger: AGTGCTACAGCTATACCTGCAAACTGAACCCAGCCA...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR GCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTAGGAGGGACTGTCGCTaGTTCGTGGGATACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPRRDCR*FVGYSL
Trigger: AAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCT...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGATGGGAGGTTGACAACTaGCTATTTGCAGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRWEVDN*LFAAPA
Trigger: AGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCA...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS-3UTR CCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGCCTGAGGCTCGGTTaGGAGGTTGACAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATCLRLG*EVDNWL
Trigger: TAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCA...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCCTCCTTCTCCACTGTTCCAGGGCTGTGGATGGCTGACTCCTGTAGGATGTCGCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ASFSTVPGLWMADSCRMSRFRRG*GDSSFS
Trigger: TGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCG...CGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTCCTGACTTCTGCTTCTaGACTGTGGCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATPDFCF*TVAMLV
Trigger: CACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGG...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGTCCCAAGCGACACCTaGTCCCCGTTGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLVPSDT*SPLSSP
Trigger: AGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGAC...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACTTTGCTGGTGGGAATaGAGAGGTCTCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQLCWWE*RGLAGL
Trigger: AAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAG...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRSTLCW*EWRGLA
Trigger: AGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCT...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGACCCTGTGCCCATGGCTaGGTTCAGTTTGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRPCAHG*VQFAGI
Trigger: TATACCTGCAAACTGAACCCAGCCATGGGCACAGGG...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAAACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRLLRGWEVVLTPVGASQTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...TTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGGTCATGAAATGTTCTaGAACCACAGCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQGHEMF*NHSAPA
Trigger: GGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCGGAGGTTTCACCACTTaGCCACTAGTCTCAAATAAC +
Preference number: 4 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGGGFTT*PLVSNN
Trigger: GTTATTTGAGACTAGTGGCCAAGTGGTGAAACCTCC...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGTTCTAGGGAGATaGAGGTTTCACCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPTVLGR*RFHHLA
Trigger: GGCCAAGTGGTGAAACCTCCATCTCCCTAGAACTGT...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR CCA 90 bp CAGGTGGGGTGGGTGTGGGTGCCTGGTGGGTGGCTAGCAGCCTTGTTTGCCTCTCTGGTCTCAAACTCCTaGCCTCAATTGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: QVGWVWVPGGWLAALFASLVSNS*PQLIHL
Trigger: GAGGTGGATCAATTGAGGCCAGGAGTTTGAGACCAG...AGAGGCAAACAAGGCTGCTAGCCACCCACCAGGCACCCACACCCACCCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACGCAACCTGCACCTCCTaGGTTCAAGCGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHATCTS*VQAILP
Trigger: TGGGAGAATCGCTTGAACCCAGGAGGTGCAGGTTGC...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTCAGGAGCTACCTGTGTaGACAGGACTAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPQELPV*TGLTLR
Trigger: TCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTG...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTAAGTCCAGGTCCTGGTaGGGCAGCTCCTCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLKSRSW*GSSSVS
Trigger: CGAGACAGAGGAGCTGCCCCACCAGGACCTGGACTT...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTGTCCTCCAGCAGCCTaGTGCTGTACCAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQCPPAA*CCTRAQ
Trigger: CTGAGCTCTGGTACAGCACCAGGCTGCTGGAGGACA...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCACTGTCCTCACTGCTaGAGCTGGAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASHCPHC*SWRAVA
Trigger: AGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGTG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGACATCTCTACGGCTCTTaGCTTCCCTGCCACGTGCGG +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGHLYGS*LPCHVR
Trigger: CCGCACGTGGCAGGGAAGCCAAGAGCCGTAGAGATG...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQARLGG*QLAICS
Trigger: GCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGC...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp AGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTAATTCAGGGGTGGTCTaGAGCTCGTTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SPGTATPLWQPHFSGHRPNSGVV*SSLPSC
Trigger: ACAAGATGGCAACGAGCTTCAGACCACCCCTGAATT...AGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGAATTCAGGGGTGGTCTaGAGCTCGTTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTENSGVV*SSLPSC
Trigger: ACAAGATGGCAACGAGCTTCAGACCACCCCTGAATT...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTCTCCAGGGACAGATGTaGAGAAAAGGCGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: PWDRYTTLAATLLRTQACLQGQM*RKGGNH
Trigger: ATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAG...ACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCCCGTTGAGCTCACCTaGCTTCTGCTTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPPVELT*LLLLDC
Trigger: ACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGGG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGAATGCCTTTGTCCCATaGAACCTAGTCCACGAGTGC +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTENAFVP*NLVHEC
Trigger: GCACTCGTGGACTAGGTTTCATGGGACAAAGGCATT...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGACTCCTGGCCTCAATTaGTCCACCTCCTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQTPGLN*STSLAS
Trigger: AGAGGCCAAGGAGGTGGATCAATTGAGGCCAGGAGT...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGGACAAAGGAGCCTGTaGACCCAGGACAAGCATGGT +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLGQRSL*TQDKHG
Trigger: ACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTAGGAGTCTGAGGTCCTaGGCACTGCCAGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: CDFGVPVICCDPGGVALPRSLRS*ALPGGT
Trigger: TGTCCCTCCTGGCAGTGCTCAGGACCTCAGACTCCT...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCTGGGAGGCTCCCTTTaGAGAACCGAGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASLGGSL*RTEGRG
Trigger: ACCTCTACCCTCGGTTCTTCAAAGGGAGCCTCCCAG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGCTTACGGCCTTCCACTaGTGTAGGAGGCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLLTAFH*CRRPTH
Trigger: ATGGGTGGGCCTCCTACATCAGTGGAAGGCCGTAAG...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGCTCATTCACCTTATaGCTGAGGCTCGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATCSFTL*LRLGWE
Trigger: CTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCA...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGAGGTCTCCCTTCCCCTaGCCACCTCAGACAGTTCTA +
Preference number: 4 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVRSPFP*PPQTVL
Trigger: TAGAACTGTCTGAGGTGGGCAGGGGAAGGGAGACCT...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGCTGGCCAAGCTGAGGTaGCCAGGAGAAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERLAKLR*PGEERG
Trigger: ACCTCTTTCTTCTCCTGGGCACCTCAGCTTGGCCAG...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGAGCTTCTTGGCTACGTaGGCTCGGAATTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERSFLAT*ARNSGV
Trigger: CACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCT...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGAGCTTCTTGGCTACGTaGGCTCGGAATTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQSFLAT*ARNSGV
Trigger: CACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCT...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGGGCTCCCAGCTTCTTaGCTACGTGGGCTCGGAATT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLGLPAS*LRGLGI
Trigger: AATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCC...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGERFRRG*GDSSFS
Trigger: TGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCG...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLRFRRG*GDSSFS
Trigger: TGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCACTGTTCCAGGGCTGTaGATGGCTGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSTVPGL*MADSCR
Trigger: CCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGT...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTCAGCCGAGTCGACACTaGCCACCTTCTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLQPSRH*PPSWLS
Trigger: AGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTG...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCCTGACTTCTGCTTCTaGACTGTGGCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQPDFCF*TVAMLV
Trigger: CACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGG...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCCTGACTTCTGCTTCTaGACTGTGGCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPPDFCF*TVAMLV
Trigger: CACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTGAGGGAGGTGGGGCTTaGAAATGCCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFEGGGA*KCLVPR
Trigger: CCTGGGGACAAGGCATTTCCAAGCCCCACCTCCCTC...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGTCTCATGGGCAGTCTaGGTTTGCCAGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGEVSWAV*VCQPSP
Trigger: AGGACTGGGCTGGCAAACCCAGACTGCCCATGAGAC...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCCTCCTTCTCCACTGTTCCAGGGCTGTGGATGGCTGACTCCTGTAGGATGTCGACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASFSTVPGLWMADSCRMSTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...CGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGGTCATGAAATGTTCTaGAACCACAGCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLGHEMF*NHSAPA
Trigger: GGCGGGGGCGCTGTGGTTCCAGAACATTTCATGACC...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGAGTTTCTCTGGGCCTTaGCCTCTTGGGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQSFSGP*PLGDPF
Trigger: GAAGGGATCCCCAAGAGGCCAAGGCCCAGAGAAACT...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGATTGATCCACCTCCTTaGCCTCTCAAAATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGIDPPP*PLKMLG
Trigger: TCCAAGCATTTTGAGAGGCCAAGGAGGTGGATCAAT...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGAGCCTCCTGAGTAGCTaGGATTACGGGCGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQSLLSS*DYGRVS
Trigger: TGACACACGCCCGTAATCCCAGCTACTCAGGAGGCT...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGCCAGCCGGGGCGAGTaGCACGTTTATTTAACTTTT +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRASRGE*HVYLTF
Trigger: AAAAGTTAAATAAACGTGCCACTCGCCCCGGCTGGC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGTACCGCGTCTACCCTaGGATTCAGGAAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPVPRLP*DSGKGL
Trigger: CAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTAC...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGAGGCTACTTCGGGGCTaGGAAGTCGTCCTTACTCCT +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQRLLRG*EVVLTP
Trigger: AGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCT...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCACACAGGCATTTCCTaGGTGGCTACTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPHTGIS*VATLCQ
Trigger: CTGGCACAGAGTAGCCACCCAGGAAATGCCTGTGTG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCGGCCCTGGATCAGCGTaGCCTTGTTCTGTCACCAAT +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSGPGSA*PCSVTN
Trigger: ATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCC...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCATGTTGCTGGCAGCTCTaGGGAGTGAATTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGRPEICCWQLWGVNSACCWQL*GVNSAA
Trigger: GGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACA...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGAGACTCTTCCTTCTCACGGCCTCCAGGGACAGATGTGAAGAAAAGGCGGAAACCTCACTGCTGGAGCTaGAGGGCTGTCGCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: GDSSFSRPPGTDVKKRRKPHCWS*RAVAFG
Trigger: GCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGG...TTTCCGCCTTTTCTTCACATCTGTCCCTGGAGGCCGTGAGAAGGAAGAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
3UTR CAA 72 bp ATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTTGGAAATGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MGSLGLPAQSLN*EREVGLGNALS
Trigger: GGACAAGGCATTTCCAAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp AGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKPSSPSGSHGQSGFASPARLGG*QLAICS
Trigger: GCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGC...TGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCGTTGAGCTCACCTaGCTTCTGCTTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASPVELT*LLLLDC
Trigger: ACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGGG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGACCCGTTGAGCTCACCTaGCTTCTGCTTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGPVELT*LLLLDC
Trigger: ACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGGG...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTTTGTTTTGGGTCCTCTaGCAATTGAGTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: TTAPPPALRGSTEGQALILFWVL*QLSFHN
Trigger: ATTATGGAAACTCAATTGTCAGAGGACCCAAAACAA...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGCTATGACACTTCCTaGAGTCTTGGGTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATCYDTS*SLGWGE
Trigger: TTCACCCCACCCAAGACTTCAGGAAGTGTCATAGCA...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGACTCCTGGCCTCAATTaGTCCACCTCCTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLTPGLN*STSLAS
Trigger: AGAGGCCAAGGAGGTGGATCAATTGAGGCCAGGAGT...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTCTTCTTACTTGGAACTaGAGGGGGCGGCCTATGACT +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLLLTWN*RGRPMT
Trigger: AGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAG...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGATGGAAATGCCAGGCGTaGAGCCTAGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGWKCQA*SLASGT
Trigger: TGTGCCAGATGCTAGGCTTCACGCCTGGCATTTCCA...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR GCA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCTTGCCATCTTGTTCATaGTCATTCACCTTATGCCTG +
Preference number: 4 (lower is better)
Translates to: PPALRGSTEGQALIGLLTLPSCS*SFTLCL
Trigger: CAGGCATAAGGTGAATGAGCATGAACAAGATGGCAA...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGACATTATACAGCTCACTaGAGCCTTGAACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRHYTAH*SLELLD
Trigger: GTCCAGGAGTTCAAGGCTGCAGTGAGCTGTATAATG...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp GACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCCTCACCCAGGCTGGACTaGAGTGGCATTATACAGCTC +
Preference number: 4 (lower is better)
Translates to: DFGVPVICCDPGGVALPPSPRLD*SGIIQL
Trigger: GAGCTGTATAATGCCACTGCAGTCCAGCCTGGGTGA...GGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCCTCGCTCCCCACTCTaGTCTGATGCATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLPRSPL*SDASER
Trigger: CCTTTCTGATGCATCAGAGCAGAGTGGGGAGCGAGG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGAGGCCTGAAATCTGTTaGTGGCAGCTCTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGERPEIC*WQLWGV
Trigger: CACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCTGCCTGAGGCTCGGTTaGGAGGTTGACAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASCLRLG*EVDNWL
Trigger: TAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCA...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCTCGGAATTCAGGGGTaGTCTGAAGCTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQLGIQG*SEARCH
Trigger: ATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAG...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGACTGTTCCAGGGCTGTaGATGGCTGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLTVPGL*MADSCR
Trigger: CCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGT...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCACAGCCGAGTCGACACTaGCCACCTTCTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKPSSPSGSHGQSGFASPQPSRH*PPSWLS
Trigger: AGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTG...TGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCTGACTTCTGCTTCTaGACTGTGGCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASPDFCF*TVAMLV
Trigger: CACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAATGGAGAGGTCTCGCTaGCCTTCTTTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRMERSR*PSLPFS
Trigger: AGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCAT...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCACTCTTTGCTGGTaGGAATGGAGAGGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPSTLCW*EWRGLA
Trigger: AGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCT...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGACCATCAGGGTCTCATaGGCAGTCTGGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLTIRVS*AVWVCQ
Trigger: CTGGCAAACCCAGACTGCCCATGAGACCCTGATGGT...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGCAACCTGCACCTCCTaGGTTCAAGCGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGEATCTS*VQAILP
Trigger: TGGGAGAATCGCTTGAACCCAGGAGGTGCAGGTTGC...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGCAGCCTTGAACTCCTaGACTAAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQAALNS*TKGILP
Trigger: TGGGAGGATCCCTTTAGTCCAGGAGTTCAAGGCTGC...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGGCAGCCTTGAACTCCTaGACTAAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVAALNS*TKGILP
Trigger: TGGGAGGATCCCTTTAGTCCAGGAGTTCAAGGCTGC...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCAGGCTGGACTGCAGTaGCATTATACAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPQAGLQ*HYTAHC
Trigger: GCAGTGAGCTGTATAATGCCACTGCAGTCCAGCCTG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTAGCTCTGAGAGGCCCTaGATCAGCGTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFSSERP*ISVALF
Trigger: GAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCTGGGAGGTTGACAACTaGCTATTTGCAGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPWEVDN*LFAAPG
Trigger: CCCAGGTGCTGCAAATAGCCAGTTGTCAACCTCCCA...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445832.7
ENST00000546272.5
3UTR CAA 72 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLG*PAQSLNLEREV
Trigger: CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR CAA 72 bp GGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTaGGAACTGAAGGGGGCGGCCTATGACTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: GLSLLRGIQSSY*ELKGAAYDLGT
Trigger: GGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGAATTCAGGGGTGGTCTaGAGCTCGTTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERNSGVV*SSLPSC
Trigger: ACAAGATGGCAACGAGCTTCAGACCACCCCTGAATT...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CTCCCAGCTTCTTGGCTACGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTCTCCAGGGACAGATGTaGAGAAAAGGCGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: LPASWLRGLGIQGWSEARLQGQM*RKGGNH
Trigger: ATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAG...ACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTCTCAGACGATTCTGTaGAGTCTATGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATSQTIL*SLCGLR
Trigger: CCTTAGCCCACATAGACTTCACAGAATCGTCTGAGA...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTGCTATGACACTTCCTaGAGTCTTGGGTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSCYDTS*SLGWGE
Trigger: TTCACCCCACCCAAGACTTCAGGAAGTGTCATAGCA...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAATGCCTTTGTCCCATaGAACCTAGTCCACGAGTGC +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPNAFVP*NLVHEC
Trigger: GCACTCGTGGACTAGGTTTCATGGGACAAAGGCATT...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGAGGGTAGAGGTGTaGCTTTGGGGTTCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASPRVEV*LWGSCY
Trigger: ATAACAGGAACCCCAAAGTCACACCTCTACCCTCGG...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CTTCTTGGCTACGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTTGCCATCGCAGCACCTGGGTTTTaGCAGAACATCTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLGYVGSEFRGGLKLVAIAAPGF*QNIFGC
Trigger: GCAGCCAAAGATGTTCTGTCAAAACCCAGGTGCTGC...GATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp TCATTCACCTTATGCCTGAGGCTCGGTTGGGAGGTTGACAACTGGCTATTTGCACCGAATCGCTCACTGTaGCACTGGGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: SFTLCLRLGWEVDNWLFAPNRSL*HWAPPS
Trigger: AGATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGG...TGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERSCSTL*WWEWRG
Trigger: ACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCT...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQSCSTL*WWEWRG
Trigger: ACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCT...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTTTCACCATGTTaGCTAGGCTGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLEREVSPC*LGWSGT
Trigger: AGTTCCAGACCAGCCTAGGCAACATGGTGAAACCTC...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGAAAGTCAAGGAGAAATaGGGTGGAAACTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGKVKEK*GGNFLL
Trigger: AAGCAAGAAGTTTCCACCGCATTTCTCCTTGACTTT...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTAACTTGAACCCAAAGTaGATAGTACCTGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATNLNPK*IVPEAR
Trigger: CCGAGCCTCAGGTACTATGCACTTTGGGTTCAAGTT...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCTCGGAATTCAGGGGTaGTCTGAAGCTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLLGIQG*SEARCH
Trigger: ATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGACTCGGAATTCAGGGGTaGTCTGAAGCTCGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGLGIQG*SEARCH
Trigger: ATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAG...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGAGCTTCTTGGCTACGTaGGCTCGGAATTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RPEICCWQLWGVNSAALRSFLAT*ARNSGV
Trigger: CACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCT...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTACTGTTCCAGGGCTGTaGATGGCTGACTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFTVPGL*MADSCR
Trigger: CCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp CCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGGAGGTTTCACCACTTaGCCACTAGTCTCAAATAAC +
Preference number: 4 (lower is better)
Translates to: PWDRYTTLAATLLRTQACGGFTT*PLVSNN
Trigger: GTTATTTGAGACTAGTGGCCAAGTGGTGAAACCTCC...ACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGTGGGCCTTGGCCTCTTaGGGATCCCTTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGEWALAS*GSLLSF
Trigger: AAATGAGAGAAGGGATCCCCAAGAGGCCAAGGCCCA...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTAGTTTCTCTGGGCCTTaGCCTCTTGGGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFSFSGP*PLGDPF
Trigger: GAAGGGATCCCCAAGAGGCCAAGGCCCAGAGAAACT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCAGGCTGGACTGCAGTaGCATTATACAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLQAGLQ*HYTAHC
Trigger: GCAGTGAGCTGTATAATGCCACTGCAGTCCAGCCTG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGCCAGCCGGGGCGAGTaGCACGTTTATTTAACTTTT +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERASRGE*HVYLTF
Trigger: AAAAGTTAAATAAACGTGCCACTCGCCCCGGCTGGC...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTTGGGAGGTTGACAACTaGCTATTTGCAGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLWEVDN*LFAAPG
Trigger: CCCAGGTGCTGCAAATAGCCAGTTGTCAACCTCCCA...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445832.7
ENST00000546272.5
CDS-3UTR TCA 90 bp GTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VALFAGGNGEVSLAFFAFARLGG*QLAICS
Trigger: GCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGC...AAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAATTCAGGGGTGGTCTaGAGCTCGTTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLNSGVV*SSLPSC
Trigger: ACAAGATGGCAACGAGCTTCAGACCACCCCTGAATT...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAAATTCAGGGGTGGTCTaGAGCTCGTTGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGNSGVV*SSLPSC
Trigger: ACAAGATGGCAACGAGCTTCAGACCACCCCTGAATT...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSLLCCF*DGNEAV
Trigger: GACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAG...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCTCAGACGATTCTGTaGAGTCTATGTGGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQSQTIL*SLCGLR
Trigger: CCTTAGCCCACATAGACTTCACAGAATCGTCTGAGA...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGAGTCCACGAGTGCTATaGCACTTCCTGAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGESPRVL*HFLKSW
Trigger: CCAAGACTTCAGGAAGTGTCATAGCACTCGTGGACT...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLSCSTL*WWEWRG
Trigger: ACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCT...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCCTTCTCCACTGTTCCAGGGCTGTGGATGGCTGACTCCTGTAGGATGTCGGACAGCTGTAGCACTCTTTaGTGGTGGGAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SFSTVPGLWMADSCRMSDSCSTL*WWEWRG
Trigger: ACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCT...GTCCGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGTGGCTGGGTTCAGTTTaGAGGTATAGCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVWLGSV*RYSCST
Trigger: AGTGCTACAGCTATACCTGCAAACTGAACCCAGCCA...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGAGGTTTCACCATGTTaGCTAGGCTGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASEVSPC*LGWSGT
Trigger: AGTTCCAGACCAGCCTAGGCAACATGGTGAAACCTC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTGGGGTTCCTGTTATCTaGTGTGATCCAGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: CDFGVPVICCDPGGVALPGVPVI*CDPGGV
Trigger: CACACCTCCTGGATCACAGCAGATAACAGGAACCCC...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTTGGGAGGTTGACAACTaGCTATTTGCAGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFWEVDN*LFAAPA
Trigger: AGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCA...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
CDS-3UTR CCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTATGGAGAGGTCTCGCTaGCCTTCTTTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLMERSR*PSLPFS
Trigger: AGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCAT...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCATGGAGAGGTCTCGCTaGCCTTCTTTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPMERSR*PSLPFS
Trigger: AGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCAT...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGCTTTGCTGGTGGGAATaGAGAGGTCTCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLLCWWE*RGLAGL
Trigger: AAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAG...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTTGTAGCACTCTTTGCTaGTGGGAATGGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLCSTLC*WEWRGL
Trigger: GAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACA...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CCA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGTCTGTGAAGTCTATGTaGGCTAAGGAGAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: MKCSGTTAPPPALRGSTESVKSM*AKERRT
Trigger: TGTTCTTCTCTCCTTAGCCCACATAGACTTCACAGA...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGTCGTCCTTACTCCTGTaGGAGCCTCGCAACCCGTGC +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGSSLLL*EPRNPC
Trigger: GCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGA...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGTTGACAGAACATCTTTaGCTGCTGTGCAGCGTGAGA +
Preference number: 4 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERLTEHL*LLCSVR
Trigger: TCTCACGCTGCACAGCAGCCAAAGATGTTCTGTCAA...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLLLCCF*DGNEAV
Trigger: GACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR TCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCTAGAAAGCCAGGGGTaGAAAAGCTCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLLESQG*KSSPFS
Trigger: TGAGAAAGGAGAGCTTTTTCACCCCTGGCTTTCTAG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGAGTCCACGAGTGCTATaGCACTTCCTGAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RPEICCWQLWGVNSAALRSPRVL*HFLKSW
Trigger: CCAAGACTTCAGGAAGTGTCATAGCACTCGTGGACT...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCACCAACAGATTTATTTaGAGGACTTGGCCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPTNRFI*RTWPVS
Trigger: AGACACGGGCCAAGTCCTTCAAATAAATCTGTTGGT...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp TGTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTGCTCATTCACCTTATaGCTGAGGCTCGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: CSTLCWWEWRGLAGLLCLCSFTL*LRLGWE
Trigger: CTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCA...AAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGCTGTACCTTAGCTTTTaGTGGCTCCTTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLLYLSF*WLLCCF
Trigger: GAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGTGGCTGGGTTCAGTTTaGAGGTATAGCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLWLGSV*RYSCST
Trigger: AGTGCTACAGCTATACCTGCAAACTGAACCCAGCCA...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGATGGCTGGGTTCAGTTTaGAGGTATAGCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGWLGSV*RYSCST
Trigger: AGTGCTACAGCTATACCTGCAAACTGAACCCAGCCA...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCACTTGGCCTCTCAAAATaGTTGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GAGRPEICCWQLWGVNSALGLSK*LDYRHE
Trigger: CTCATGCCTGTAATCCAAGCATTTTGAGAGGCCAAG...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCCTTGGCCTCTCAAAATaGTTGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSLGLSK*LDYRHE
Trigger: CTCATGCCTGTAATCCAAGCATTTTGAGAGGCCAAG...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGACATTATACAGCTCACTaGAGCCTTGAACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGHYTAH*SLELLD
Trigger: GTCCAGGAGTTCAAGGCTGCAGTGAGCTGTATAATG...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTAGACACCATCATGTGTaGTATATTCACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPRHHHV*YIHKCR
Trigger: TCTGCATTTGTGAATATACCACACATGATGGTGTCT...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCAAGGAGAAATGCGGTaGAAACTTCTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPQGEMR*KLLACP
Trigger: TGGACAAGCAAGAAGTTTCCACCGCATTTCTCCTTG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GGGGCTGGCAGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAACTGTCGCTGCTTCGTaGGATACAGTCTTCTTACTT +
Preference number: 4 (lower is better)
Translates to: GAGRPEICCWQLWGVNSATVAAS*DTVFLL
Trigger: AAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGT...TGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCTGCCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
3UTR CAA 72 bp TCGGAATTCAGGGGTGGTCTGAAGCTCGTTGCCATCTaGTTCATGCTCATTCACCTTATGCCTGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SEFRGGLKLVAI*FMLIHLMPEAR
Trigger: CCGAGCCTCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPEICCWQLWGVNSAALRLLCCF*DGNEAV
Trigger: GACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAG...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR TCA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTTTCCTGAGGTCATaGAATGTTCTGGAACCACAG +
Preference number: 4 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLFFLRS*NVLEPQ
Trigger: CTGTGGTTCCAGAACATTTCATGACCTCAGGAAAAA...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
CDS-3UTR TCA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCCTTAAGGTTCAGCATTaGCAGAGAGGCAATATCCAA +
Preference number: 4 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPLKVQH*QRGNIQ
Trigger: TTGGATATTGCCTCTCTGTCAATGCTGAACCTTAAG...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGCCATCTTGTTCATaGTCATTCACCTTATGCCTG +
Preference number: 4 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSLPSCS*SFTLCL
Trigger: CAGGCATAAGGTGAATGAGCATGAACAAGATGGCAA...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TTCTGTACCTTAGCTTTTGCTGGCTCCTTTGCTGCTTCTGAGATGGTAATGAAGGGTGGGGCTTGGAAATaGCTTGTCCCCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FCTLAFAGSFAASEMVMKGGAWK*LVPRVG
Trigger: CCCCACCCTGGGGACAAGGCATTTCCAAGCCCCACC...CTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGCCTTGTTTGCCTCTaGAGTGTCCTCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGSLVCL*SVLQQP
Trigger: AGGCTGCTGGAGGACACTGCAGAGGCAAACAAGGCT...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGCCTGAAATCTGTTGCTaGCAGCTCTGGGGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLPEICC*QLWGVN
Trigger: ATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGG...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp CATGGCTGGGTTCAGTTTGCAGGTATAGCTGTAGCACTCTTTGCTGGTGGGAATGATGCACTTTTAAGATaGAGTCAAGGCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: HGWVQFAGIAVALFAGGNDALLR*SQGRAR
Trigger: CCGCGCCCGGCCTTGACTCCATCTTAAAAGTGCATC...ATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGAACCCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCTTAAGGTTCAGCATTaGCAGAGAGGCAATATCCAA +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLLKVQH*QRGNIQ
Trigger: TTGGATATTGCCTCTCTGTCAATGCTGAACCTTAAG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGCACCATCCCTGGCCATaGGCTTCTACTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLHHPWP*ASTSFL
Trigger: AAGAAAAGAAGTAGAAGCTCATGGCCAGGGATGGTG...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCTTGCCATCTTGTTCATaGTCATTCACCTTATGCCTG +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASLPSCS*SFTLCL
Trigger: CAGGCATAAGGTGAATGAGCATGAACAAGATGGCAA...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGTTGCCATCTTGTTCATaGTCATTCACCTTATGCCTG +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGELPSCS*SFTLCL
Trigger: CAGGCATAAGGTGAATGAGCATGAACAAGATGGCAA...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGAGGCTGCTGTACCTTAGCTTTTaGTGGCTCCTTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCLSTNHSDGVWAGSGRLLYLSF*WLLCCF
Trigger: GAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG...CAGCCTCCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGACTACTTCTTGCAGAATaGCTTTGTCCCATGAAACCT +
Preference number: 4 (lower is better)
Translates to: PSGSHGQSGFASPVLELGLLLAE*LCPMKP
Trigger: AGGTTTCATGGGACAAAGGCATTCTGCAAGAAGTAG...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTCTACTTCTTGCAGAATaGCTTTGTCCCATGAAACCT +
Preference number: 4 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLLLLAE*LCPMKP
Trigger: AGGTTTCATGGGACAAAGGCATTCTGCAAGAAGTAG...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp CTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGAGGTGGGGCGTGTGTCAACATaGTCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LMGSLGLPAQSLNLEREVGRVST*SANFCI
Trigger: AATACAAAAATTAGCTGAGCATGTTGACACACGCCC...CACCTCCCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGTCTGTGAAGTCTATGTaGGCTAAGGAGAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: SGSHGQSGFASPVLELGESVKSM*AKERRT
Trigger: TGTTCTTCTCTCCTTAGCCCACATAGACTTCACAGA...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTCAAGGAGAAATGCGGTaGAAACTTCTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFQGEMR*KLLACP
Trigger: TGGACAAGCAAGAAGTTTCCACCGCATTTCTCCTTG...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR CAA 72 bp GGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAGCCTTCATCACCATCA +
Preference number: 4 (lower is better)
Translates to: GLDWSSHPTATF*AQLSSKPSSPS
Trigger: TGATGGTGATGAAGGCTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
3UTR CAA 72 bp TGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTaGAGGCAGAATTCCTTCTCTGGGAAACCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: CCWQLWGVNSAA*RQNSFSGKPVF
Trigger: AAAAACCGGTTTCCCAGAGAAGGAATTCTGCCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR GCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTTTGCCATCTTGTTCATaGTCATTCACCTTATGCCTG +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFLPSCS*SFTLCL
Trigger: CAGGCATAAGGTGAATGAGCATGAACAAGATGGCAA...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR GCA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGGGCGTGTGTCAACATaGTCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASGRVST*SANFCI
Trigger: AATACAAAAATTAGCTGAGCATGTTGACACACGCCC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGCTGGGGAGTGAATTCTaGAGCCTTGAGGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGLGSEF*SLEAEF
Trigger: GAATTCTGCCTCAAGGCTGCAGAATTCACTCCCCAG...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGACAGTTCTAGGGAGATaGAGGTTTCACCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGTVLGR*RFHHLA
Trigger: GGCCAAGTGGTGAAACCTCCATCTCCCTAGAACTGT...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp AAGAAAAGGCGGAAACCATCATCCTCCAAAGCGACTTTCTGTACCTTAGCTTTTCACTGTCCTCACTGCTaGAGCTGGAGGGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: KKRRKPSSSKATFCTLAFHCPHC*SWRAVA
Trigger: AGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGTG...AAAAGCTAAGGTACAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp GGGACAGATGTGAAGAAAAGGCGGAAACCATCATCCTCCAAAGCGACTTTCTGTGTGGTGAGAAGTGGGTaGACTCCAGATAGATGCACT +
Preference number: 4 (lower is better)
Translates to: GTDVKKRRKPSSSKATFCVVRSG*TPDRCT
Trigger: AGTGCATCTATCTGGAGTTCACCCACTTCTCACCAC...ACAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTTCACATCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR TCA 90 bp GGGACAGATGTGAAGAAAAGGCGGAAACCATCATCCTCCAAAGCGACTTTCTGTGTCTGCTGCAGTAATTaGTGTGGTGAGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTDVKKRRKPSSSKATFCVCCSN*CGEKWV
Trigger: CACCCACTTCTCACCACATCAATTACTGCAGCAGAC...ACAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTTCACATCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR GCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGTGGCTGGGTTCAGTTTaGAGGTATAGCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGWLGSV*RYSCST
Trigger: AGTGCTACAGCTATACCTGCAAACTGAACCCAGCCA...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR GCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTAAAGTCAAGGAGAAATaGGGTGGAAACTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFKVKEK*GGNFLL
Trigger: AAGCAAGAAGTTTCCACCGCATTTCTCCTTGACTTT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp TTCTGTACCTTAGCTTTTGCTGGCTCCTTTGCTGCTTCTGAGATGGTAATGAAGTGCCTGAGGCTCGGTTaGGAGGTTGACAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: FCTLAFAGSFAASEMVMKCLRLG*EVDNWL
Trigger: TAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCA...CTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGATGGAGAGGTCTCGCTaGCCTTCTTTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGMERSR*PSLPFS
Trigger: AGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCAT...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CCA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTAGACACCATCATGTGTaGTATATTCACAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFRHHHV*YIHKCR
Trigger: TCTGCATTTGTGAATATACCACACATGATGGTGTCT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR CAA 72 bp GTAAAGTCAAGGAGAAATGCGGTGGAAACTTCTTGCTaGTCCACAAATCATTCAGATGGGGTTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VKSRRNAVETSC*STNHSDGVWAG
Trigger: ACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTCCACCGCATTTCTCCTTGACTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR TCA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGTTGTTTTGGGTCCTCTaGCAATTGAGTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGLFWVL*QLSFHN
Trigger: ATTATGGAAACTCAATTGTCAGAGGACCCAAAACAA...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
3UTR CAA 72 bp TTTAGTAAAGTCAAGGAGAAATGCGGTGGAAACTTCTaGCTTGTCCACAAATCATTCAGATGGGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: FSKVKEKCGGNF*LVHKSFRWGLG
Trigger: GCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTCCACCGCATTTCTCCTTGACTTTACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTGCCACGTGCGGGCGTaGCTCCAAGCCCCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSCHVRA*LQAPSR
Trigger: CCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCA...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS GCA 90 bp CTTCCCTGCCACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGGCATTaGCGCCTCGCGGCACCGCTCCAGCTCCTCCGCATCGCTACTGCT +
Preference number: 5 (lower is better)
Translates to: LPCHVRALLQAPSRH*RLAAPLQLLRIATA
Trigger: AGCAGTAGCGATGCGGAGGAGCTGGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
ENST00000546272.5
CDS GCA 90 bp CTATTTGCAGCACCGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGGCACCGCTCC +
Preference number: 5 (lower is better)
Translates to: LFAAPALGFPATCGR*SKPQAGIAASRHRS
Trigger: GGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS GCA 90 bp AACCCCATCTCTACGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGGCACCGCTCC +
Preference number: 5 (lower is better)
Translates to: NPISTALGFPATCGR*SKPQAGIAASRHRS
Trigger: GGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGTAGAGATGGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp CTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTAGGGCTCCCAGCTTCTaGGCTACGTGGGCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: LEPQRPRQPSVGAQRGRPRAPSF*ATWARN
Trigger: ATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCT...AGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp AATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCTTGCAGCACCGGCTCTaGGCTTCCCTGCCACGTGCG +
Preference number: 5 (lower is better)
Translates to: NVLEPQRPRQPSVGAQRGLQHRL*ASLPRA
Trigger: CGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAA...GCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS GCA 90 bp GACAACTGGCTATTTGCAGCACCGGCTCTTGGCTTCCCTGCCACGTaGGGGCGTTGCTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: DNWLFAAPALGFPAT*GRCSKPQAGIAASR
Trigger: CCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS-3UTR CAA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTAGCCCCAAGCCGGCATaGCCGCCTCGCGGCACCGCT +
Preference number: 5 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATSPKPA*PPRGTA
Trigger: AGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCT...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLMGSLG*PAQSLN
Trigger: GTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp TCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCCAGCTCACTGCAGCCTaGAACTCCTGGACTAAAGGG +
Preference number: 5 (lower is better)
Translates to: SGTTAPPPALRGSTEGQAQLTAA*NSWTKG
Trigger: CCCTTTAGTCCAGGAGTTCAAGGCTGCAGTGAGCTG...GGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGAGCCCCAAGCCGGCATaGCCGCCTCGCGGCACCGCT +
Preference number: 5 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERSPKPA*PPRGTA
Trigger: AGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCT...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PPALRGSTEGQALIGLLTGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp ACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TTAPPPALRGSTEGQALIMGSLG*PAQSLN
Trigger: GTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT...AATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCAAGTTTCTCTGGGCCTaGGCCTCTTGGGGATCCCTT +
Preference number: 5 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGKFLWA*ASWGSL
Trigger: AAGGGATCCCCAAGAGGCCAAGGCCCAGAGAAACTT...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS GCA 90 bp GCATTGCCGCCTCGCGGCACCGCTCCAGCTCCTCCGCATCGCTACTaGTGTTACTACTTTCCGAATCGCTCACTGTGCCACTGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: ALPPRGTAPAPPHRY*CYYFPNRSLCHWAP
Trigger: CGGCGCCCAGTGGCACAGTGAGCGATTCGGAAAGTAGTAACAGCAGTAGCGATGCGGAGGAGCTGGAGCGGTGCCGCGAGGCGGCAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTGCCACGTGCGGGCGTaGCTCCAAGCCCCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSCHVRA*LQAPSR
Trigger: CCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCA...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS GCA 90 bp CTGGTCAACATGGTGAAACCCCATCTCTACGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGGCATTGCCGC +
Preference number: 5 (lower is better)
Translates to: LVNMVKPHLYGSWLP*HVRALLQAPSRHCR
Trigger: GCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGTAGAGATGGGGTTTCACCATGTTGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTAGCCCCAAGCCGGCATaGCCGCCTCGCGGCACCGCT +
Preference number: 5 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFSPKPA*PPRGTA
Trigger: AGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp TGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGCCTTTTTCTTCTTTTaGGTCCCAAGCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: WNHSAPASPPWEHRGAGLAFFFF*VPSDTW
Trigger: CCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGC...AAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: MKCSGTTAPPPALRGSTEGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CAA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGMGSLG*PAQSLN
Trigger: GTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CAA 90 bp AGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SAPASPPWEHRGAGLDWSPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...AGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGCTGCAGACCCTGCCCTaGTTTGGGGCAGGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPLQTLP*FGAGVA
Trigger: AGCTACTCCTGCCCCAAACAAGGGCAGGGTCTGCAG...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACGGCTCGGTTGGGAGGTaGACAACTGGCTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHGSVGR*TTGYLQ
Trigger: CTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCC...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGACACCTGGTCCCCGTaGAGCTCACCTGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRDTWSP*SSPDFC
Trigger: GCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 5 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHTEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS CCA 90 bp TCACTGTCCTCACTGGAGCTGGAGGGCTGTCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCACGGCCTCCAGGGACAGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLSSLELEGCRFRRG*GDSSFSRPPGTDVK
Trigger: CTTCACATCTGTCCCTGGAGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGTGAGGACAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS CCA 90 bp CTGTCCTCACTGCTGGAGCTGGAGGGCTGTCGCTTTCGGCGGGGTTaGGGAGACTCTTCCTTCTCACGGCCATCATCCTCCAAAGCGACT +
Preference number: 5 (lower is better)
Translates to: LSSLLELEGCRFRRG*GDSSFSRPSSSKAT
Trigger: AGTCGCTTTGGAGGATGATGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539736.5
CDS-3UTR CAA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCTTGCAGCACCGGCTCTaGGCTTCCCTGCCACGTGCG +
Preference number: 5 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASLQHRL*ASLPRA
Trigger: CGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAA...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
CDS-3UTR CAA 90 bp GAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: EMFWNHSAPASPPWEHRGPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...CCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000546272.5
CDS-3UTR CAA 90 bp TTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCACAAGCTTCTACTTCTaGCAGAATGCCTTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: FWNHSAPASPPWEHRGAGTSFYF*QNAFVP
Trigger: TGGGACAAAGGCATTCTGCAAGAAGTAGAAGCTTGT...GCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTGGGTGGCTAGCAGCCTaGTTTGCCTCTGCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATGWLAA*FASAVS
Trigger: GGACACTGCAGAGGCAAACAAGGCTGCTAGCCACCC...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCAGGGCTCCCAGCTTCTaGGCTACGTGGGCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSRAPSF*ATWARN
Trigger: ATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCT...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTAGGGCTCCCAGCTTCTaGGCTACGTGGGCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLRAPSF*ATWARN
Trigger: ATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCT...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGACACCTGGTCCCCGTaGAGCTCACCTGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLDTWSP*SSPDFC
Trigger: GCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGGGGACACCTTGTCCTaGGAGCTGGCTGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLGDTLS*ELAEPC
Trigger: ACAGGGCTCAGCCAGCTCCAAGGACAAGGTGTCCCC...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp GAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: EQAFITIRVSWAVWVCQPAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...GGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAAAGTTTCTCTGGGCCTaGGCCTCTTGGGGATCCCTT +
Preference number: 5 (lower is better)
Translates to: HEMFWNHSAPASPPWEHRKFLWA*ASWGSL
Trigger: AAGGGATCCCCAAGAGGCCAAGGCCCAGAGAAACTT...TCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTTGGATCAGCGTGGCCTaGTTCTGTCACCAATGTACC +
Preference number: 5 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPWISVA*FCHQCT
Trigger: GGTACATTGGTGACAGAACAAGGCCACGCTGATCCA...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCCTGGGCGCCGCCATCTaGAACCACCGCAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSLGAAI*NHRKGL
Trigger: CAATCCTTTGCGGTGGTTCAAGATGGCGGCGCCCAG...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR CAA 90 bp CCCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACTGCAGCACCTGGGTTTaGACAGAACATCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PASPPWEHRGAGLDWSSHCSTWV*TEHLWL
Trigger: CAGCCAAAGATGTTCTGTCAAAACCCAGGTGCTGCA...GTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGTTGACAACTGGCTATTaGCAGCACCGGCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MKCSGTTAPPPALRGSTELTTGY*QHRLLA
Trigger: AGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAA...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS-3UTR CAA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAAGGGCTCCCAGCTTCTaGGCTACGTGGGCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: PSGSHGQSGFASPVLELGRAPSF*ATWARN
Trigger: ATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCT...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGACACCTGGTCCCCGTaGAGCTCACCTGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLDTWSP*SSPDFC
Trigger: GCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTC...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp ATGAAGCTGTCCAGCAGGGCTCCCAGCTTCTTGGCTACGTGGGCTCGGAATTCAGACACCTGGTCCCCGTaGAGCTCACCTGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: MKLSSRAPSFLATWARNSDTWSP*SSPDFC
Trigger: GCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTC...TGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCTGCTGGACAGCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCGCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCTTGACAACTGGCTATTaGCAGCACCTGGGTTTTGAC +
Preference number: 5 (lower is better)
Translates to: PPALRGSTEGQALIGLLTLTTGY*QHLGFD
Trigger: GTCAAAACCCAGGTGCTGCAAATAGCCAGTTGTCAA...GGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445832.7
ENST00000546272.5
CDS-3UTR CAA 90 bp GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACTTGACAACTGGCTATTaGCAGCACCGGCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALPGGTKEPVNPGQAWSHLTTGY*QHRLLA
Trigger: AGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAA...GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTAGGGCTCCCAGCTTCTaGGCTACGTGGGCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFRAPSF*ATWARN
Trigger: ATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCT...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp AGGCCTGAAATCTGTTGCTGGCAGCTCTGGGGAGTGAATTCTGCAGCCTTGAGGGACACCTGGTCCCCGTaGAGCTCACCTGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: RPEICCWQLWGVNSAALRDTWSP*SSPDFC
Trigger: GCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTC...CCTCAAGGCTGCAGAATTCACTCCCCAGAGCTGCCAGCAACAGATTTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp GGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTTTTGCCCAGTCCTTGAACTaGGAGAGGGAGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: GSTEGQALIGLLTLQPLFAQSLN*EREVGL
Trigger: AAGCCCCACCTCCCTCTCCAAGTTCAAGGACTGGGC...AAAAAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLMGSLG*PAQSLN
Trigger: GTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGATGGGCAGTCTGGGTTaGCCAGCCCAGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LHHHQGLMGSLGLPAQSLMGSLG*PAQSLN
Trigger: GTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCAT...CAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTACACTTCCTGAAGTCTaGGGTGGGGTGAACGCACAA +
Preference number: 5 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATTLPEV*GGVNAQ
Trigger: TTGTGCGTTCACCCCACCCAAGACTTCAGGAAGTGT...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp GAAACTTCTTGCTTGTCCACAAATCATTCAGATGGGGTTTGGGCAGGTAGCGGGTTGCAGCACCGGCTCTaGGCTTCCCTGCCACGTGCG +
Preference number: 5 (lower is better)
Translates to: ETSCLSTNHSDGVWAGSGLQHRL*ASLPRA
Trigger: CGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAA...CCCGCTACCTGCCCAAACCCCATCTGAATGATTTGTGGACAAGCAAGAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTTGACAACTGGCTATTaGCAGCACCGGCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQLTTGY*QHRLLA
Trigger: AGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAA...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000537817.5
ENST00000539736.5
CDS-3UTR CAA 90 bp TCGAGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCGGCTCGGTTGGGAGGTaGACAACTGGCTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: SSKPSSPSGSHGQSGFASGSVGR*TTGYLQ
Trigger: CTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCC...GCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp AGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGGCTCGGTTGGGAGGTaGACAACTGGCTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: SKPSSPSGSHGQSGFASPGSVGR*TTGYLQ
Trigger: CTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCC...TGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGGCTCGGTTGGGAGGTaGACAACTGGCTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLGSVGR*TTGYLQ
Trigger: CTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCC...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTGCCTTTTTCTTCTTTTaGGTCCCAAGCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: PWEHRGAGLDWSSHPTATAFFFF*VPSDTW
Trigger: CCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGC...AGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp GCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGCCTACAGCCACTTTTTaGGCCCAACTCTCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: ASLHHHQGLMGSLGLPAQPTATF*AQLSSK
Trigger: CTTGCTCGAGAGTTGGGCCAAAAAAGTGGCTGTAGG...CTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp AGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 5 (lower is better)
Translates to: SKPSSPSGSHGQSGFASPTEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...TGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 5 (lower is better)
Translates to: PSSPSGSHGQSGFASPVLTEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...AAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGACAGAGGGGCAGGCCTaGATTGGTCTTCTCACCCTA +
Preference number: 5 (lower is better)
Translates to: SGSHGQSGFASPVLELGETEGQA*IGLLTL
Trigger: TAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGT...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp GACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTCCCACACTTCCTGAAGTCTaGGGTGGGGTGAACGCACAA +
Preference number: 5 (lower is better)
Translates to: DFGVPVICCDPGGVALPPTLPEV*GGVNAQ
Trigger: TTGTGCGTTCACCCCACCCAAGACTTCAGGAAGTGT...GGGAGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAAGCTTCTACTTCTaGCAGAATGCCTTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPTSFYF*QNAFVP
Trigger: TGGGACAAAGGCATTCTGCAAGAAGTAGAAGCTTGT...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGACAGCTCACTGCAGCCTaGAACTCCTGGACTAAAGGG +
Preference number: 5 (lower is better)
Translates to: PSGSHGQSGFASPVLELGQLTAA*NSWTKG
Trigger: CCCTTTAGTCCAGGAGTTCAAGGCTGCAGTGAGCTG...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp CGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTACAGCCACTTGCCTTTTTCTTCTTTTaGGTCCCAAGCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: RGSTEGQALIGLLTLQPLAFFFF*VPSDTW
Trigger: CCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGC...AAGTGGCTGTAGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp CAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGGCCTTTTTCTTCTTTTaGGTCCCAAGCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: QGLMGSLGLPAQSLNLERAFFFF*VPSDTW
Trigger: CCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGC...CCTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp ATGAAATGTTCTGGAACCACAGCGCCCCCGCCAGCCCTCCGTGGGAGCACAGAGAACCAACAGATTTATTaGAAGGACTTGGCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: MKCSGTTAPPPALRGSTENQQIY*KDLARV
Trigger: GACACGGGCCAAGTCCTTCAAATAAATCTGTTGGTT...CTCTGTGCTCCCACGGAGGGCTGGCGGGGGCGCTGTGGTTCCAGAACATTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp TCATTCACCTTATGCCTGAGGCTCGGTTGGGAGGTTGACAACTGGCTATTTGCACCATCTCTACGGCTCTaGGCTTCCCTGCCACGTGCG +
Preference number: 5 (lower is better)
Translates to: SFTLCLRLGWEVDNWLFAPSLRL*ASLPRA
Trigger: CGCACGTGGCAGGGAAGCCAAGAGCCGTAGAGATGG...TGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS TCA 90 bp AACTTGAACCCAAAGTGCATAGTACCTGAGGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGCACCGGCTCTTGGCTTCCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: NLNPKCIVPEARLGG*QLAICSTGSWLPCH
Trigger: GTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGTACTATGCACTTTGGGTTCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS-3UTR CAA 90 bp GTAGCACTCTTTGCTGGTGGGAATGGAGAGGTCTCGCTGGCCTTCTTTGCCTTTGGCTCGGTTGGGAGGTaGACAACTGGCTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: VALFAGGNGEVSLAFFAFGSVGR*TTGYLQ
Trigger: CTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCC...AAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGGCCTTTTTCTTCTTTTaGGTCCCAAGCGACACCTGG +
Preference number: 5 (lower is better)
Translates to: SGSHGQSGFASPVLELGEAFFFF*VPSDTW
Trigger: CCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGC...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000445832.7
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS-3UTR CAA 90 bp GGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGGTGGAAACTTCTTGCTaGTCCACAAATCATTCAGAT +
Preference number: 5 (lower is better)
Translates to: GYFGAGKSSLLLWEPRNPVETSC*STNHSD
Trigger: ATCTGAATGATTTGTGGACAAGCAAGAAGTTTCCAC...CGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp GCCAGCCCTCCGTGGGAGCACAGAGGGGCAGGCCTTGATTGGTCTTCTCACCCTGTGGAAACTTCTTGCTaGTCCACAAATCATTCAGAT +
Preference number: 5 (lower is better)
Translates to: ASPPWEHRGAGLDWSSHPVETSC*STNHSD
Trigger: ATCTGAATGATTTGTGGACAAGCAAGAAGTTTCCAC...AGGGTGAGAAGACCAATCAAGGCCTGCCCCTCTGTGCTCCCACGGAGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp AGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCCCAGCTTTCCTGTATTaGTTCCCAAGAGCATCATGC +
Preference number: 5 (lower is better)
Translates to: SLHHHQGLMGSLGLPAQSPAFLY*FPRASC
Trigger: GCATGATGCTCTTGGGAACAAATACAGGAAAGCTGG...GGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp GCCTCCTTCTCCACTGTTCCAGGGCTGTGGATGGCTGACTCCTGTAGGATGTCGTTGACAACTGGCTATTaGCAGCACCTGGGTTTTGAC +
Preference number: 5 (lower is better)
Translates to: ASFSTVPGLWMADSCRMSLTTGY*QHLGFD
Trigger: GTCAAAACCCAGGTGCTGCAAATAGCCAGTTGTCAA...CGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp CTTCTTGGCTACGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTTGCCATCTTTGACAGAACATCTTaGGCTGCTGTGCAGCGTGAG +
Preference number: 5 (lower is better)
Translates to: LLGYVGSEFRGGLKLVAIFDRTS*AAVQRE
Trigger: CTCACGCTGCACAGCAGCCAAAGATGTTCTGTCAAA...GATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS-3UTR CAA 90 bp TGTGACTTTGGGGTTCCTGTTATCTGCTGTGATCCAGGAGGTGTGGCCCTGCCTGGTAGAGGTGTGACTTaGGGGTTCCTGTTATCTGCT +
Preference number: 5 (lower is better)
Translates to: CDFGVPVICCDPGGVALPGRGVT*GFLLSA
Trigger: AGCAGATAACAGGAACCCCAAAGTCACACCTCTACC...AGGCAGGGCCACACCTCCTGGATCACAGCAGATAACAGGAACCCCAAAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp AGCAAGCCTTCATCACCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTGAATTCTGCAGCCTaGAGGCAGAATTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SKPSSPSGSHGQSGFASPVNSAA*RQNSFS
Trigger: AGAGAAGGAATTCTGCCTCAAGGCTGCAGAATTCAC...TGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGGTGATGAAGGCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288757.7
CDS-3UTR CAA 90 bp TCATTCACCTTATGCCTGAGGCTCGGTTGGGAGGTTGACAACTGGCTATTTGCATGCAGCGTGAGACTGTaGGGGCAAAGGCAGGAACAC +
Preference number: 5 (lower is better)
Translates to: SFTLCLRLGWEVDNWLFACSVRL*GQRQEH
Trigger: GTGTTCCTGCCTTTGCCCCAACAGTCTCACGCTGCA...TGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS GCA 90 bp TCTTGGCTACGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTTaGCATCTTGTTCATGCTCATTCACCTTATGCCTGGAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: SWLRGLGIQGWSEAR*HLVHAHSPYAWKCQ
Trigger: CTGGCATTTCCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS TCA 90 bp GCGTGCTGGCCTAGTAAGAGGGCTGATGGTCTGGTTATAACATGCTaGCCAGCCTCTGCCACGCGAACTGCAGTGCTTCATTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: ACWPSKRADGLVITC*PASATRTAVLHFFK
Trigger: TTTAAAGAAATGAAGCACTGCAGTTCGCGTGGCAGAGGCTGGTCAGCATGTTATAACCAGACCATCAGCCCTCTTACTAGGCCAGCACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502891.6
CDS-3UTR CAA 90 bp TCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAGAGACTCTAAGTTTTGTTTaGGGTCCTCTGACAATTGAG +
Preference number: 5 (lower is better)
Translates to: SGSHGQSGFASPVLELGETLSFV*GPLTIE
Trigger: CTCAATTGTCAGAGGACCCAAAACAAAACTTAGAGT...CTCTCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS-3UTR CAA 90 bp CCATCAGGGTCTCATGGGCAGTCTGGGTTTGCCAGCCCAGTCCTTGAACTTGGAACTCTAAGTTTTGTTTaGGGTCCTCTGACAATTGAG +
Preference number: 5 (lower is better)
Translates to: PSGSHGQSGFASPVLELGTLSFV*GPLTIE
Trigger: CTCAATTGTCAGAGGACCCAAAACAAAACTTAGAGT...TCCAAGTTCAAGGACTGGGCTGGCAAACCCAGACTGCCCATGAGACCCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000445832.7
CDS TCA 90 bp CATCTTGTTCATGCTCATTCACCTTATGCCTGGAAATGCCAGGCGTaGAGCCTAGCATCTGGCACACGCAGGGGATCAGTATTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: HLVHAHSPYAWKCQA*SLASGTRRGSVFVE
Trigger: TTCAACAAATACTGATCCCCTGCGTGTGCCAGATGCTAGGCTTCACGCCTGGCATTTCCAGGCATAAGGTGAATGAGCATGAACAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS GCA 72 bp CACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGGCATTaGCGCCTCGCGGCACCGCTCCAGCTCCTCCGCATC +
Preference number: 6 (lower is better)
Translates to: HVRALLQAPSRH*RLAAPLQLLRI
Trigger: GATGCGGAGGAGCTGGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
ENST00000546272.5
CDS GCA 72 bp GCACCGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: APALGFPATCGR*SKPQAGIAASR
Trigger: CCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS CAA 72 bp CCACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGGCATaGCCGCCTCGCGGCACCGCTCCAGCTCCTCCGCAT +
Preference number: 6 (lower is better)
Translates to: PRAGVAPSPKPA*PPRGTAPAPPH
Trigger: ATGCGGAGGAGCTGGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
ENST00000546272.5
CDS CAA 90 bp GCTTCCCTGCCACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGGCATaGCCGCCTCGCGGCACCGCTCCAGCTCCTCCGCATCGCTACTGC +
Preference number: 6 (lower is better)
Translates to: ASLPRAGVAPSPKPA*PPRGTAPAPPHRYC
Trigger: GCAGTAGCGATGCGGAGGAGCTGGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
ENST00000546272.5
CDS CAA 72 bp AGCACCGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTaGCTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: STGSWLPCHVRA*LQAPSRHCRLA
Trigger: CGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS CAA 90 bp GCTATTTGCAGCACCGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTaGCTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGGCACCGCTC +
Preference number: 6 (lower is better)
Translates to: AICSTGSWLPCHVRA*LQAPSRHCRLAAPL
Trigger: GAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS GCA 72 bp TCTACGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTTaGTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: STALGFPATCGR*SKPQAGIAASR
Trigger: CCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGTAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS CAA 72 bp CTCTACGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTaGCTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: LYGSWLPCHVRA*LQAPSRHCRLA
Trigger: CGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGTAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS CAA 90 bp AAACCCCATCTCTACGGCTCTTGGCTTCCCTGCCACGTGCGGGCGTaGCTCCAAGCCCCAAGCCGGCATTGCCGCCTCGCGGCACCGCTC +
Preference number: 6 (lower is better)
Translates to: KPHLYGSWLPCHVRA*LQAPSRHCRLAAPL
Trigger: GAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGTAGAGATGGGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS GCA 72 bp CTATTTGCAGCACCGGCTCTTGGCTTCCCTGCCACGTaGGGGCGTTGCTCCAAGCCCCAAGCCGGCATTGCC +
Preference number: 6 (lower is better)
Translates to: LFAAPALGFPAT*GRCSKPQAGIA
Trigger: GGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS GCA 72 bp CAACTGGCTATTTGCAGCACCGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: QLAICSTGSWLP*HVRALLQAPSR
Trigger: CCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000538296.5
ENST00000539736.5
CDS GCA 72 bp ATGGTGAAACCCCATCTCTACGGCTCTTGGCTTCCCTaGCACGTGCGGGCGTTGCTCCAAGCCCCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: MVKPHLYGSWLP*HVRALLQAPSR
Trigger: CCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGTAGAGATGGGGTTTCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS CAA 90 bp GTCACTGTCCTCACTGGAGCTGGAGGGCTGTCGCTTTCGGCGGGGTaGGGGAGACTCTTCCTTCTCACGGCCTCCAGGGACAGATGTGAA +
Preference number: 6 (lower is better)
Translates to: VTVLTGAGGLSLSAG*GRLFLLTASRDRCE
Trigger: TTCACATCTGTCCCTGGAGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGTGAGGACAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288757.7
ENST00000537817.5
CDS CAA 90 bp ACTGTCCTCACTGCTGGAGCTGGAGGGCTGTCGCTTTCGGCGGGGTaGGGGAGACTCTTCCTTCTCACGGCCATCATCCTCCAAAGCGAC +
Preference number: 6 (lower is better)
Translates to: TVLTAGAGGLSLSAG*GRLFLLTAIILQSD
Trigger: GTCGCTTTGGAGGATGATGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539736.5
CDS GCA 72 bp CCTCGCGGCACCGCTCCAGCTCCTCCGCATCGCTACTaGTGTTACTACTTTCCGAATCGCTCACTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: PRGTAPAPPHRY*CYYFPNRSLCH
Trigger: GTGGCACAGTGAGCGATTCGGAAAGTAGTAACAGCAGTAGCGATGCGGAGGAGCTGGAGCGGTGCCGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000537817.5
ENST00000539736.5
ENST00000546272.5
CDS CCA 72 bp ACCTTATGCCTGAGGCTCGGTTGGGAGGTTGACAACTaGCTATTTGCAGCACCGGCTCTTGGCTTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: TLCLRLGWEVDN*LFAAPALGFPA
Trigger: GGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000539736.5
CDS CCA 72 bp GTAATGAAGCTGAGGCTCGGTTGGGAGGTTGACAACTaGCTATTTGCAGCACCGGCTCTTGGCTTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: VMKLRLGWEVDN*LFAAPALGFPA
Trigger: GGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGCTTCATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538296.5
CDS TCA 72 bp GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTaGAACCCCATCTCTACGGCTCTTGGCTTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: EVKRSRPSWSTW*NPISTALGFPA
Trigger: GGCAGGGAAGCCAAGAGCCGTAGAGATGGGGTTTCACCATGTTGACCAGGATGGTCTCGATCTCTTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546272.5
CDS CCA 72 bp ACCTTATGCCTGAGGCTCGGTTGGGAGGTTGACAACTaGCTATTTGCAGCACCATCCATCCTCTCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: TLCLRLGWEVDN*LFAAPSILSGS
Trigger: GGAGCCTGAGAGGATGGATGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535367.1
CDS TCA 72 bp CTCATTCACCTTATGCCTGAGGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGCACCGGCTCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: LIHLMPEARLGG*QLAICSTGSWL
Trigger: AAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288757.7
ENST00000508193.2
ENST00000539736.5
CDS TCA 72 bp CCAAAGTGCATAGTACCTGAGGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGCACCGGCTCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: PKCIVPEARLGG*QLAICSTGSWL
Trigger: AAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGTACTATGCACTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS TCA 72 bp CATGCTCATTCACCTTATGCCTGGAAATGCCAGGCGTaGAGCCTAGCATCTGGCACACGCAGGGGATCAGTA +
Preference number: 6 (lower is better)
Translates to: HAHSPYAWKCQA*SLASGTRRGSV
Trigger: TACTGATCCCCTGCGTGTGCCAGATGCTAGGCTTCACGCCTGGCATTTCCAGGCATAAGGTGAATGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS GCA 72 bp CGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTTaGCATCTTGTTCATGCTCATTCACCTTATGCCTGG +
Preference number: 6 (lower is better)
Translates to: RGLGIQGWSEAR*HLVHAHSPYAW
Trigger: CCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS TCA 72 bp CCTAGTAAGAGGGCTGATGGTCTGGTTATAACATGCTaGCCAGCCTCTGCCACGCGAACTGCAGTGCTTCAT +
Preference number: 6 (lower is better)
Translates to: PSKRADGLVITC*PASATRTAVLH
Trigger: ATGAAGCACTGCAGTTCGCGTGGCAGAGGCTGGTCAGCATGTTATAACCAGACCATCAGCCCTCTTACTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502891.6
CDS TCA 72 bp CTCATTCACCTTATGCCTGAGGCTCGGTTGGGAGGTTaGCAACTGGCTATTTGCAGCACCATCCATCCTCTC +
Preference number: 6 (lower is better)
Translates to: LIHLMPEARLGG*QLAICSTIHPL
Trigger: GAGAGGATGGATGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535367.1
CDS CAA 90 bp TACGTGGGCTCGGAATTCAGGGGTGGTCTGAAGCTCGTTGCCATCTaGTTCATGCTCATTCACCTTATGCCTGGAAATGCCAGGCGTGAA +
Preference number: 6 (lower is better)
Translates to: YVGSEFRGGLKLVAI*FMLIHLMPGNARRE
Trigger: TTCACGCCTGGCATTTCCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS TCA 72 bp CTGTACCTTAGCTTTTGCTGGCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTGAGGCTCGGTTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: LYLSFCWLLCCF*DGNEAEARLGG
Trigger: ACCTCCCAACCGAGCCTCAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538296.5
CDS TCA 72 bp CTGTACCTTAGCTTTTGCTGGCTCCTTTGCTGCTTCTaGGATGGTAATGAAGCTACAGGGAGACGAGACGGT +
Preference number: 6 (lower is better)
Translates to: LYLSFCWLLCCF*DGNEATGRRDG
Trigger: ACCGTCTCGTCTCCCTGTAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502891.6
CDS CAA 72 bp TCGGAATTCAGGGGTGGTCTGAAGCTCGTTGCCATCTaGTTCATGCTCATTCACCTTATGCCTGGAAATGCC +
Preference number: 6 (lower is better)
Translates to: SEFRGGLKLVAI*FMLIHLMPGNA
Trigger: GGCATTTCCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537817.5
CDS CCA 72 bp GGGTATGTGATTGTAAATGCAAAAGCGAAAGCGTGCTaGCCTAGTAAGAGGGCTGATGGTCTGGTTATAACA +
Preference number: 6 (lower is better)
Translates to: GYVIVNAKAKAC*PSKRADGLVIT
Trigger: TGTTATAACCAGACCATCAGCCCTCTTACTAGGCCAGCACGCTTTCGCTTTTGCATTTACAATCACATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502891.6