Pregenerated sensors for C12ORF29 (Homo sapiens)
Ensembl gene IDs: ENSG00000133641Ensembl transcript IDs: ENST00000356891.4, ENST00000453037.7, ENST00000547468.1, ENST00000548511.5, ENST00000549345.6, ENST00000550333.5, ENST00000552121.5, ENST00000552847.5
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTGCTAGTATTCTTTATTGGTAGGAGTGAGACTGATAGCTTGGTCTaGGAACCCTGGAGGGCTCTGCTGTTGAAGCTGAGCATCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VLVFFIGRSETDSLV*EPWRALLLKLSISC Trigger: GCAGCTGATGCTCAGCTTCAACAGCAGAGCCCTCCAGGGTTCTCAGACCAAGCTATCAGTCTCACTCCTACCAATAAAGAATACTAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547468.1 |
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| CDS TCA 90 bp | AGTACAGATGTCTACTCCTCTTGGGAGCCTCCACTAACCACAAGCTaGATGAGGAATTCCTCTTTTCTCCAGTGGCACCTGATGTATTCA | + |
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Preference number: 5 (lower is better) Translates to: STDVYSSWEPPLTTS*MRNSSFLQWHLMYS Trigger: TGAATACATCAGGTGCCACTGGAGAAAAGAGGAATTCCTCATTCAGCTTGTGGTTAGTGGAGGCTCCCAAGAGGAGTAGACATCTGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS CCA 90 bp | TGTCCTGCCAAGGCTCTAAAGCAGGGAACAATAGTAGCTTTTACTTaGCCTCTCCATACTCCTTACTGTGAGACAGTCCTTGGCTATAAT | + |
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Preference number: 5 (lower is better) Translates to: CPAKALKQGTIVAFT*PLHTPYCETVLGYN Trigger: ATTATAGCCAAGGACTGTCTCACAGTAAGGAGTATGGAGAGGCCAAGTAAAAGCTACTATTGTTCCCTGCTTTAGAGCCTTGGCAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547468.1 |
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| CDS GCA 90 bp | CTGAAAAGGAAGGGACATGCTGTGGATGTGAGTTATCCATTTCCTTaGGAGGACAAGTTTGAATCTCCTGATAAGGAAAATTCTTTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LKRKGHAVDVSYPFP*EDKFESPDKENSFA Trigger: TGCGAAAGAATTTTCCTTATCAGGAGATTCAAACTTGTCCTCGCAAGGAAATGGATAACTCACATCCACAGCATGTCCCTTCCTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS GCA 72 bp | AGACCTCCCCAGGGAAACCTACAGAGGTTCCTGGCCTaGAGGGCAGTTCTAAAGCGCCCAGCCGCCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: RPPQGNLQRFLA*RAVLKRPAALA Trigger: GGCGAGGGCGGCTGGGCGCTTTAGAACTGCCCTGCAGGCCAGGAACCTCTGTAGGTTTCCCTGGGGAGGTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS GCA 72 bp | CATGATGAGCCCAACAAGCAGTGCGAATGGAGGGCGTaGTTTCGAGCGGCGCCCGGTCCAGTCGCGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HDEPNKQCEWRA*FRAAPGPVAEK Trigger: CTTCTCCGCGACTGGACCGGGCGCCGCTCGAAAGCACGCCCTCCATTCGCACTGCTTGTTGGGCTCATCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000356891.4 ENST00000453037.7 ENST00000550333.5 ENST00000552121.5 ENST00000552847.5 |
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| CDS CCA 72 bp | ATTCCCTCCCTCACAACTAAGAAAAGTACAAGAACCTaGAGCTCAGGGCGTACGGAACTCCCACCCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: IPSLTTKKSTRT*SSGRTELPPQT Trigger: GGTCTGGGGTGGGAGTTCCGTACGCCCTGAGCTCCAGGTTCTTGTACTTTTCTTAGTTGTGAGGGAGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS CAA 90 bp | CTTCCTGGGAGTTTGCCTAAGCTGATATTCCCTCTTCCTGGGAGTTaGCCTAAGCTGATCTTCCCTCTTCCTTGTCAGCTGACTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPGSLPKLIFPLPGS*PKLIFPLPCQLTSW Trigger: CCAGGAAGTCAGCTGACAAGGAAGAGGGAAGATCAGCTTAGGCAAACTCCCAGGAAGAGGGAATATCAGCTTAGGCAAACTCCCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS TCA 72 bp | GTCTACTCCTCTTGGGAGCCTCCACTAACCACAAGCTaGATGAGGAATTCCTCTTTTCTCCAGTGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: VYSSWEPPLTTS*MRNSSFLQWHL Trigger: CAGGTGCCACTGGAGAAAAGAGGAATTCCTCATTCAGCTTGTGGTTAGTGGAGGCTCCCAAGAGGAGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS GCA 72 bp | TTGAGACAAGGTCACAGTCCAACTCTCAGGCTAGAGTaGAGTGGCACGATCATGGTTCACTGCAGTCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LRQGHSPTLRLE*SGTIMVHCSLN Trigger: GTTGAGACTGCAGTGAACCATGATCGTGCCACTGCACTCTAGCCTGAGAGTTGGACTGTGACCTTGTCTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS CAA 72 bp | AGTTTGCCTAAGCTGATATTCCCTCTTCCTGGGAGTTaGCCTAAGCTGATCTTCCCTCTTCCTTGTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLPKLIFPLPGS*PKLIFPLPCQL Trigger: CAGCTGACAAGGAAGAGGGAAGATCAGCTTAGGCAAACTCCCAGGAAGAGGGAATATCAGCTTAGGCAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS CCA 72 bp | AAGGCTCTAAAGCAGGGAACAATAGTAGCTTTTACTTaGCCTCTCCATACTCCTTACTGTGAGACAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KALKQGTIVAFT*PLHTPYCETVL Trigger: AAGGACTGTCTCACAGTAAGGAGTATGGAGAGGCCAAGTAAAAGCTACTATTGTTCCCTGCTTTAGAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547468.1 |
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| CDS CAA 72 bp | TGTGACCACTGCACCTGGCCTCAAGGCTATTCTCTTTaGACGCTTTATTGTCACAGACTACAGCTAGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: CDHCTWPQGYSL*TLYCHRLQLVK Trigger: TTTTACTAGCTGTAGTCTGTGACAATAAAGCGTCAAAAGAGAATAGCCTTGAGGCCAGGTGCAGTGGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS TCA 72 bp | GACTTTGCACATAATGGGCACTCAAGACATGCCGGTTaGGAACCTATAACCTTAATCTGGGATATCTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: DFAHNGHSRHAG*EPITLIWDIFL Trigger: TAGGAAGATATCCCAGATTAAGGTTATAGGTTCTCAACCGGCATGTCTTGAGTGCCCATTATGTGCAAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS CAA 72 bp | AGCAAAAATATAAAAATCTCCAGCTGTGAGTCCATTTaGCATTCCCTGGTTCCAAGCTGTTTGCCTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: SKNIKISSCESI*HSLVPSCLPAH Trigger: GTGTGCAGGCAAACAGCTTGGAACCAGGGAATGCAAAATGGACTCACAGCTGGAGATTTTTATATTTTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547468.1 |
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| CDS GCA 72 bp | AAGGGACATGCTGTGGATGTGAGTTATCCATTTCCTTaGGAGGACAAGTTTGAATCTCCTGATAAGGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: KGHAVDVSYPFP*EDKFESPDKEN Trigger: ATTTTCCTTATCAGGAGATTCAAACTTGTCCTCGCAAGGAAATGGATAACTCACATCCACAGCATGTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548511.5 |
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| CDS CAA 90 bp | ACCAGAAACTTTTTAGCATATTATAGTCGAGTGCCAGTGACTTCTTaGTTCTTTCAGAGGCATTCTAAAAAGCGGCGTGTTTCACGAATC | + |
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Preference number: 6 (lower is better) Translates to: TRNFLAYYSRVPVTS*FFQRHSKKRRVSRI Trigger: GATTCGTGAAACACGCCGCTTTTTAGAATGCCTCTGAAAGAACAAAGAAGTCACTGGCACTCGACTATAATATGCTAAAAAGTTTCTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000549345.6 |
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| CDS CAA 72 bp | CTTGGCCTCTCCATACTCCTTACTGTGAGACAGTCCTaGGCTATAATACACATCTTTACTTTTAATGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LGLSILLTVRQS*AIIHIFTFNAL Trigger: TAAGGCATTAAAAGTAAAGATGTGTATTATAGCCAAGGACTGTCTCACAGTAAGGAGTATGGAGAGGCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547468.1 |
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| CDS CAA 72 bp | TTTTTAGCATATTATAGTCGAGTGCCAGTGACTTCTTaGTTCTTTCAGAGGCATTCTAAAAAGCGGCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: FLAYYSRVPVTS*FFQRHSKKRRV Trigger: AACACGCCGCTTTTTAGAATGCCTCTGAAAGAACAAAGAAGTCACTGGCACTCGACTATAATATGCTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000549345.6 |
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