RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF97 (Homo sapiens)

Ensembl gene IDs: ENSG00000257057

Ensembl transcript IDs: ENST00000542198.3

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CTTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAAAATCTGCACCCCAGCCCTGCTaGCGGAGGAGGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLRSSDISRKRFLLNGKSAPQPC*RRRLLL
Trigger: GAGGAGCAGCCTCCTCCGCCAGCAGGGCTGGGGTGC...AGATTTTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp ATCTTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCAGCTGGCGGAGGAGGCTaGTCCTCTTCGCGACCCGCC +
Preference number: 4 (lower is better)
Translates to: ILNPETSLSFFSVLQTSAAGGGG*SSSRPA
Trigger: GGCGGGTCGCGAAGAGGAGCAGCCTCCTCCGCCAGC...TGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp TTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAAAATCTATTCCACTGCTGGCCGTaGTCTAGGGGGCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FSVLQTSAERGSFLMENLFHCWP*SRGPRP
Trigger: CGGCCGCGGCCCCCTAGAGCACGGCCAGCAGTGGAA...TAGATTTTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp ATCTTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCACTTGGGCGCCACCACTaGGGTCACCACCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: ILNPETSLSFFSVLQTSALGRHH*GHHHRL
Trigger: GAGGCGGTGGTGGTGACCGCAGTGGTGGCGCCCAAG...TGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CCA 90 bp TTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCAGAACTTCGCGACCCGCCTTaGGCGCCACCACTGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LNPETSLSFFSVLQTSAELRDPP*APPLRS
Trigger: TGACCGCAGTGGTGGCGCCCAAGGCGGGTCGCGAAG...TTCTGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp TTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAAAATCTACCTCCTCGCCTGTCATaGCGCAGCGGTCTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: FSVLQTSAERGSFLMENLPPRLS*RSGLPR
Trigger: TCTCGGAAGACCGCTGCGGCATGACAGGCGAGGAGG...TAGATTTTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CCA 90 bp GAGTTTCTTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAGTCTTCCGAGAGCCCTaGGCACGGTTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EFLLRSSDISRKRFLLNGVFREP*ARFPSQ
Trigger: CTGAGAAGGAAACCGTGCCCAGGGCTCTCGGAAGAC...TCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAAGAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CCA 90 bp CTTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAAAATCTAATTTCTTCCACTGCTaGCCGTGCTCTAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LLRSSDISRKRFLLNGKSNFFHC*PCSRGP
Trigger: CGGCCCCCTAGAGCACGGCCAGCAGTGGAAGAAATT...AGATTTTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CCA 90 bp TTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAAAATCTATCTGCTCGGCAGTCCTaGCTTCAAGCCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FSVLQTSAERGSFLMENLSARQS*LQASHR
Trigger: CCTGTGGGAGGCTTGAAGCCAGGACTGCCGAGCAGA...TAGATTTTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp CTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATAAAAATTTCTTCCACTaGTGGCCGTGCTCTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LEFLLRSSDISRKRFLLNKNFFH*WPCSRG
Trigger: CCCCCTAGAGCACGGCCAGCAGTGGAAGAAATTTTT...ATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAAGAAACTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp ATCTTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCACCCTTCCAGGGCCACTaGAGCTGGATTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: ILNPETSLSFFSVLQTSAPFQGH*SWIFNV
Trigger: CACATTAAAAATCCAGCTGCAGTGGCCCTGGAAGGG...TGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR GCA 90 bp GCACACATCTTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACAGCAATAAACTGTTTCTaGTCGGCAGTCCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AHILNPETSLSFFSVLQTAINCF*SAVLAS
Trigger: TGAAGCCAGGACTGCCGAGCAGAAACAGTTTATTGC...TGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAAGATGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR TCA 90 bp ATCTTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCAATTCATCTTATCTTCTaGGTCCTCCGTGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ILNPETSLSFFSVLQTSAIHLIF*VLRAWS
Trigger: ACTCCAGGCACGGAGGACTCAGAAGATAAGATGAAT...TGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR TCA 90 bp GAGTTTCTTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAATCCTGAAACAAGCTTaGGTTTCTTCTCCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EFLLRSSDISRKRFLLNGILKQA*VSSPFF
Trigger: GAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGAT...TCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAAGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CCA 90 bp TTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCAGAACAGGGCCACTGCAGCTaGATTTTTAATGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LNPETSLSFFSVLQTSAEQGHCS*IFNVAF
Trigger: GAATGCCACATTAAAAATCCAGCTGCAGTGGCCCTG...TTCTGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR TCA 90 bp AGTTTCTTCTCCGTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAATCATCTCTCTTAATATaGCGTTCTTCTTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: SFFSVLQTSAERGSFLMESSLLI*RSSSST
Trigger: AGTACTGGAAGAAGAACGTCATATTAAGAGAGATGA...TTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAACGGAGAAGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CCA 90 bp GTTCTTCAGACATCAGCAGAAAGAGGTTCCTTCTTAATGGAAAATCTAATTCATGCCTGGAGTAGTACTTaGCTTGTGGCAATAAACTGT +
Preference number: 4 (lower is better)
Translates to: VLQTSAERGSFLMENLIHAWSST*LVAINC
Trigger: ACAGTTTATTGCCACAAGCCAAGTACTACTCCAGGC...ATGAATTAGATTTTCCATTAAGAAGGAACCTCTTTCTGCTGATGTCTGAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS GCA 90 bp CGGAGGAGGCTGCTCCTCTTCGCGACCCGCCTTGGGCGCCACCACTaGGGTCACCACCACCGCCTCCTCGCCTGTCATGCCGCAGCGGTC +
Preference number: 5 (lower is better)
Translates to: RRRLLLFATRLGRHH*GHHHRLLACHAAAV
Trigger: GACCGCTGCGGCATGACAGGCGAGGAGGCGGTGGTGGTGACCGCAGTGGTGGCGCCCAAGGCGGGTCGCGAAGAGGAGCAGCCTCCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS-3UTR CAA 90 bp TTAAATCCTGAAACAAGCTTGAGTTTCTTCTCCGTTCTTCAGACATCAGCAGAATCTTCGCGACCCGCCTaGGGCGCCACCACTGCGGTC +
Preference number: 5 (lower is better)
Translates to: LNPETSLSFFSVLQTSAESSRPA*GATTAV
Trigger: GACCGCAGTGGTGGCGCCCAAGGCGGGTCGCGAAGA...TTCTGCTGATGTCTGAAGAACGGAGAAGAAACTCAAGCTTGTTTCAGGATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS GCA 72 bp CGCGCCCCGCACCCCAGCCCTGCTGGCGGAGGAGGCTaGTCCTCTTCGCGACCCGCCTTGGGCGCCACCACT +
Preference number: 6 (lower is better)
Translates to: RAPHPSPAGGGG*SSSRPALGATT
Trigger: AGTGGTGGCGCCCAAGGCGGGTCGCGAAGAGGAGCAGCCTCCTCCGCCAGCAGGGCTGGGGTGCGGGGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS GCA 72 bp CTGCTCCTCTTCGCGACCCGCCTTGGGCGCCACCACTaGGGTCACCACCACCGCCTCCTCGCCTGTCATGCC +
Preference number: 6 (lower is better)
Translates to: LLLFATRLGRHH*GHHHRLLACHA
Trigger: GGCATGACAGGCGAGGAGGCGGTGGTGGTGACCGCAGTGGTGGCGCCCAAGGCGGGTCGCGAAGAGGAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS GCA 72 bp CCACTGCGGTCACCACCACCGCCTCCTCGCCTGTCATaGCGCAGCGGTCTTCCGAGAGCCCTGGGCACGGTT +
Preference number: 6 (lower is better)
Translates to: PLRSPPPPPRLS*RSGLPRALGTV
Trigger: AACCGTGCCCAGGGCTCTCGGAAGACCGCTGCGGCATGACAGGCGAGGAGGCGGTGGTGGTGACCGCAGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS CCA 72 bp CTCGCCTGTCATGCCGCAGCGGTCTTCCGAGAGCCCTaGGCACGGTTTCCTTCTCAGCTCAGTCGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LACHAAAVFREP*ARFPSQLSRRQ
Trigger: CTGCCTGCGACTGAGCTGAGAAGGAAACCGTGCCCAGGGCTCTCGGAAGACCGCTGCGGCATGACAGGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3
CDS GCA 72 bp TGGAGTAGTACTTGGCTTGTGGCAATAAACTGTTTCTaGTCGGCAGTCCTGGCTTCAAGCCTCCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: WSSTWLVAINCF*SAVLASSLPQA
Trigger: TGCCTGTGGGAGGCTTGAAGCCAGGACTGCCGAGCAGAAACAGTTTATTGCCACAAGCCAAGTACTACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542198.3