RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF96 (Homo sapiens)

Ensembl gene IDs: ENSG00000187479

Ensembl transcript IDs: ENST00000339446.3, ENST00000617612.3

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCGGTGTGCAAAATCGGAGTTGCAAACCATCGGACAAGGGCATaGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCG +
Preference number: 1 (lower is better)
Translates to: GAVCKIGVANHRTRA*SGYPPPTQRGRASP
Trigger: CGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTTGTCCGATGGTTTGCAACTCCGATTTTGCACACCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR CCA 90 bp GGTGTGCAAAATCGGAGTTGCAAACCATCGGACAAGGGCATGGAGTaGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCGCACAC +
Preference number: 1 (lower is better)
Translates to: GVQNRSCKPSDKGME*LPAADSARARLPAH
Trigger: GTGTGCGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTTGTCCGATGGTTTGCAACTCCGATTTTGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR-3UTR GCA 90 bp GTCCCAACGGCCACGCCTAACAATTATAAAAGTGTTCAGCGAGAGTGTTGGCGTCACGGTGGAGCGGTGTaGAAAATCGGAGTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: VPTATPNNYKSVQRECWRHGGAV*KIGVAN
Trigger: GTTTGCAACTCCGATTTTGCACACCGCTCCACCGTG...ACGCCAACACTCTCGCTGAACACTTTTATAATTGTTAGGCGTGGCCGTTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR GCA 72 bp AGTCCGAGCGCGCGAGGAGCGGCGGTCCCGGGTCCTTaGGGGTCCCCCGGGAGCAGGGCGCGGGCACTCTCG +
Preference number: 3 (lower is better)
Translates to: SPSARGAAVPGP*GSPGSRARALS
Trigger: CGAGAGTGCCCGCGCCCTGCTCCCGGGGGACCCGCAAGGACCCGGGACCGCCGCTCCTCGCGCGCTCGGACT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR CCA 72 bp AATCGGAGTTGCAAACCATCGGACAAGGGCATGGAGTaGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTC +
Preference number: 3 (lower is better)
Translates to: NRSCKPSDKGME*LPAADSARARL
Trigger: GAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTTGTCCGATGGTTTGCAACTCCGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR CCA 72 bp TGCAAAATCGGAGTTGCAAACCATCGGACAAGGGCATaGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGC +
Preference number: 3 (lower is better)
Translates to: CKIGVANHRTRA*SGYPPPTQRGR
Trigger: GCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTTGTCCGATGGTTTGCAACTCCGATTTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR-3UTR CAA 90 bp GTCCCAACGGCCACGCCTAACAATTATAAAAGTGTTCAGCGAGAGTGTTGGCGTTGTGCAAAATCGGAGTaGCAAACCATCGGACAAGGG +
Preference number: 3 (lower is better)
Translates to: VPTATPNNYKSVQRECWRCAKSE*QTIGQG
Trigger: CCCTTGTCCGATGGTTTGCAACTCCGATTTTGCACA...ACGCCAACACTCTCGCTGAACACTTTTATAATTGTTAGGCGTGGCCGTTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
3UTR CAA 72 bp GAGTCCGAGCGCGCGAGGAGCGGCGGTCCCGGGTCCTaGCGGGTCCCCCGGGAGCAGGGCGCGGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: ESERARSGGPGS*RVPREQGAGTL
Trigger: GAGAGTGCCCGCGCCCTGCTCCCGGGGGACCCGCAAGGACCCGGGACCGCCGCTCCTCGCGCGCTCGGACTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GGGAGCAGGGCGCGGGCACTCTCGGGGTTCACACGCCGGTCCCCGCGCGGACCGTCAGCTCGCCGGGCTTaGCGGCCATGGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GSRARALSGFTRRSPRGPSARRA*RPWRLR
Trigger: CCGGAGGCGCCATGGCCGCCAAGCCCGGCGAGCTGA...CGGTCCGCGCGGGGACCGGCGTGTGAACCCCGAGAGTGCCCGCGCCCTGCTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GTCCCGGGTCCTTGCGGGTCCCCCGGGAGCAGGGCGCGGGCACTCTCGGGGTTCAAATCTGCTGCGGGGTaGCGGCGGCCCTCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VPGPCGSPGSRARALSGFKSAAG*RRPSRA
Trigger: GGCCCGCGAGGGCCGCCGCCACCCCGCAGCAGATTT...GAACCCCGAGAGTGCCCGCGCCCTGCTCCCGGGGGACCCGCAAGGACCCGGGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp GGCATGGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCGCACACGGGATCCAAATCTGCTaGGGGGTGGCGGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GMEWLPAADSARARLPAHGIQIC*GVAAAL
Trigger: GAGGGCCGCCGCCACCCCGCAGCAGATTTGGATCCC...GTGTGCGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp TCCGAGCGCGCGAGGAGCGGCGGTCCCGGGTCCTTGCGGGTCCCCCGGGAGCAGTCGAAGGTCACCGGCTaGGTCTTGAAGCGAGACTGG +
Preference number: 4 (lower is better)
Translates to: SERARSGGPGSLRVPREQSKVTG*VLKRDW
Trigger: CCAGTCTCGCTTCAAGACGCAGCCGGTGACCTTCGA...CTGCTCCCGGGGGACCCGCAAGGACCCGGGACCGCCGCTCCTCGCGCGCTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp TCCGAGCGCGCGAGGAGCGGCGGTCCCGGGTCCTTGCGGGTCCCCCGGGAGCAGTCCTCCTCCACCTCCTaGATCTCGTCGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SERARSGGPGSLRVPREQSSSTS*ISSKVT
Trigger: GGTGACCTTCGACGAGATCCAGGAGGTGGAGGAGGA...CTGCTCCCGGGGGACCCGCAAGGACCCGGGACCGCCGCTCCTCGCGCGCTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GGCATGGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCGCACACCCGAGTCGGAGTCGCTaGAGTCCAGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GMEWLPAADSARARLPAHPSRSR*SPGCSS
Trigger: TGAGGAACAGCCTGGACTCCAGCGACTCCGACTCGG...GTGTGCGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GGTCCTTGCGGGTCCCCCGGGAGCAGGGCGCGGGCACTCTCGGGGTTCACACGCGACAAGGGCATGGAGTaGCTACCCGCCGCCGACTCA +
Preference number: 4 (lower is better)
Translates to: GPCGSPGSRARALSGFTRDKGME*LPAADS
Trigger: TGAGTCGGCGGCGGGTAGCCACTCCATGCCCTTGTC...GCGTGTGAACCCCGAGAGTGCCCGCGCCCTGCTCCCGGGGGACCCGCAAGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GCGGGCGCGCCTCCCCGCACACACTCACAGCAGAGTTCGCACTGGGAAGAGTTAGTCTTGAAGCGAGACTaGCGCGGCCGCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: AGAPPRTHSQQSSHWEELVLKRD*RGRRSR
Trigger: CCGGCTGCGGCGGCCGCGCCAGTCTCGCTTCAAGAC...TAACTCTTCCCAGTGCGAACTCTGCTGTGAGTGTGTGCGGGGAGGCGCGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GCCGACTCAGCGCGGGCGCGCCTCCCCGCACACACTCACAGCAGAGTTCGCACTCCTTCTCCTCCTCCATaGGGGACACCCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ADSARARLPAHTHSRVRTPSPPP*GTPPPP
Trigger: AGGAGGAGGGGGTGTCCCCCATGGAGGAGGAGAAGG...AGTGCGAACTCTGCTGTGAGTGTGTGCGGGGAGGCGCGCCCGCGCTGAGTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp CCGACTCAGCGCGGGCGCGCCTCCCCGCACACACTCACAGCAGAGTTCGCACTGCACGGTGGAGCGGTGTaGAAAATCGGAGTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PTQRGRASPHTLTAEFALHGGAV*KIGVAN
Trigger: GTTTGCAACTCCGATTTTGCACACCGCTCCACCGTG...CAGTGCGAACTCTGCTGTGAGTGTGTGCGGGGAGGCGCGCCCGCGCTGAGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp GCGCGGGCGCGCCTCCCCGCACACACTCACAGCAGAGTTCGCACTGGGAAGAGTGTGCAAAATCGGAGTTaGAAACCATCGGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARARLPAHTHSRVRTGKSVQNRS*KPSDKG
Trigger: GCCCTTGTCCGATGGTTTGCAACTCCGATTTTGCAC...ACTCTTCCCAGTGCGAACTCTGCTGTGAGTGTGTGCGGGGAGGCGCGCCCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp TGGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCGCACACACTCAGATCGTTAAATAAATaGCTTCAGCCATCGCAATGC +
Preference number: 4 (lower is better)
Translates to: WSGYPPPTQRGRASPHTLRSLNK*LQPSQC
Trigger: GCATTGCGATGGCTGAAGGCATTTATTTAACGATCT...GAGTGTGTGCGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp GCTGCGCCCAAAGTCCCAACGGCCACGCCTAACAATTATAAAAGTGTTCAGCGACGGGGGATCCAAATCTaGTGCGGGGTGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AAPKVPTATPNNYKSVQRRGIQI*CGVAAA
Trigger: GGCCGCCGCCACCCCGCAGCAGATTTGGATCCCCCG...TCGCTGAACACTTTTATAATTGTTAGGCGTGGCCGTTGGGACTTTGGGCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp TGGAGCGGTGTGCAAAATCGGAGTTGCAAACCATCGGACAAGGGCATGGAGTGGCATCGGACAAGGGCATaGAGTGGCTACCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: WSGVQNRSCKPSDKGMEWHRTRA*SGYPPP
Trigger: CGGCGGCGGGTAGCCACTCCATGCCCTTGTCCGATG...CCACTCCATGCCCTTGTCCGATGGTTTGCAACTCCGATTTTGCACACCGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR TCA 90 bp GTGTGCAAAATCGGAGTTGCAAACCATCGGACAAGGGCATGGAGTGGCTACCCGTCAGTTTGCAGCTGCTaGGCTGCTCCCGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: VCKIGVANHRTRAWSGYPSVCSC*AAPAAA
Trigger: CGCTGCAGCGGGAGCAGCTCAGCAGCTGCAAACTGA...CGGGTAGCCACTCCATGCCCTTGTCCGATGGTTTGCAACTCCGATTTTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp GCAGTAGCAGCCGCGCTGCGCCCAAAGTCCCAACGGCCACGCCTAACAATTATAAGGCACTCCAGGCTCTaGAGGAACGACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AVAAALRPKSQRPRLTIIRHSRL*RNDFLA
Trigger: GGCCAAGAAGTCGTTCCTGCAGAGCCTGGAGTGCCT...TATAATTGTTAGGCGTGGCCGTTGGGACTTTGGGCGCAGCGCGGCTGCTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR TCA 90 bp TGCAAAAATAAATATCAATCCTCCAGACGCAGTAGCAGCCGCGCTGCGCCCAAATCACCGGCTGCGTCTTaGAGCGAGACTGGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: CKNKYQSSRRSSSRAAPKSPAAS*SETGAA
Trigger: GGCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGA...TTTGGGCGCAGCGCGGCTGCTACTGCGTCTGGAGGATTGATATTTATTTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR GCA 90 bp TGCAAAAATAAATATCAATCCTCCAGACGCAGTAGCAGCCGCGCTGCGCCCAAAGGTAACTGGAGCAGATaGCCATCAGCTCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: CKNKYQSSRRSSSRAAPKGNWSR*PSARRA
Trigger: AGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACC...TTTGGGCGCAGCGCGGCTGCTACTGCGTCTGGAGGATTGATATTTATTTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GTCCCAACGGCCACGCCTAACAATTATAAAAGTGTTCAGCGAGAGTGTTGGCGTGCAGGAACGACTTCTTaGCCTTCTCCTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VPTATPNNYKSVQRECWRAGTTS*PSPPPW
Trigger: CCATGGAGGAGGAGAAGGCCAAGAAGTCGTTCCTGC...ACGCCAACACTCTCGCTGAACACTTTTATAATTGTTAGGCGTGGCCGTTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CCA 90 bp GTCCCAACGGCCACGCCTAACAATTATAAAAGTGTTCAGCGAGAGTGTTGGCGTGTTCAGCGAGAGTGTTaGCGTGAGTGTGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: VPTATPNNYKSVQRECWRVQREC*RECEWV
Trigger: CACCCATTCACACTCACGCCAACACTCTCGCTGAAC...ACGCCAACACTCTCGCTGAACACTTTTATAATTGTTAGGCGTGGCCGTTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS CCA 90 bp GAGACTGGCGCGGCCGCCGCAGCCGGCCCCGGCCCTTGGGCAGCTTaGCGGGCCGCACGGGCTGCGGGAACTCGTCGGCCAGGCACACGA +
Preference number: 5 (lower is better)
Translates to: ETGAAAAAGPGPWAA*RAARAAGTRRPGTR
Trigger: TCGTGTGCCTGGCCGACGAGTTCCCGCAGCCCGTGCGGCCCGCCAAGCTGCCCAAGGGCCGGGGCCGGCTGCGGCGGCCGCGCCAGTCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 90 bp GTTCCGCCGCGCTCCGAGGCGCTCGCCGCCGCTGCTGTCGCCGTCTaGCCCGCGGCGGCCAGGCTCGCGGCTTATATAGCCCGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: VPPRSEALAAAAVAV*PAAARLAAYIARGC
Trigger: GCAGCCGCGGGCTATATAAGCCGCGAGCCTGGCCGCCGCGGGGCAGACGGCGACAGCAGCGGCGGCGAGCGCCTCGGAGCGCGGCGGAAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 90 bp GTTCCGGGAGAAGCCGCGGCCCCGGAGCACGCGGCTGGCCCGAGCTaGGCCCGGACAGGGACCCTCAATCGCCGCGACTGGGCGGGCACT +
Preference number: 5 (lower is better)
Translates to: VPGEAAAPEHAAGPS*ARTGTLNRRDWAGT
Trigger: AGTGCCCGCCCAGTCGCGGCGATTGAGGGTCCCTGTCCGGGCGCAGCTCGGGCCAGCCGCGTGCTCCGGGGCCGCGGCTTCTCCCGGAAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 90 bp CGCAGCCGGCCCCGGCCCTTGGGCAGCTTGGCGGGCCGCACGGGCTaGGGGAACTCGTCGGCCAGGCACACGAAGTGCGGCATCACCGCC +
Preference number: 5 (lower is better)
Translates to: RSRPRPLGSLAGRTG*GNSSARHTKCGITA
Trigger: GGCGGTGATGCCGCACTTCGTGTGCCTGGCCGACGAGTTCCCGCAGCCCGTGCGGCCCGCCAAGCTGCCCAAGGGCCGGGGCCGGCTGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CCA 90 bp TCACCGCCTGGTAACTGGAGCAGATGCCCATCAGCTCGCCGGGCTTaGCGGCCATGGCGCCTCCGGCGTCTGCGGGGCCGGGCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPPGNWSRCPSARRA*RPWRLRRLRGRAAG
Trigger: CCCCGCCGCCCGGCCCCGCAGACGCCGGAGGCGCCATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACCAGGCGGTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS-3UTR CAA 90 bp AAGGGCATGGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCGCAGTCACCGGCTGCGTCTaGAAGCGAGACTGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: KGMEWLPAADSARARLPAVTGCV*KRDWRG
Trigger: GCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGAC...TGCGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS-3UTR CAA 90 bp AAACCATCGGACAAGGGCATGGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGATCAGCTCGCCGGGCTaGGCGGCCATGGCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: KPSDKGMEWLPAADSARAISSPG*AAMAPP
Trigger: CGGAGGCGCCATGGCCGCCAAGCCCGGCGAGCTGAT...CGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTTGTCCGATGGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS CCA 90 bp GACAGGGACCCTCAATCGCCGCGACTGGGCGGGCACTGTCCCTTCTaGGATCCCCAAGTCTGCACCAACCGGGTTGGCCGCGGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: DRDPQSPRLGGHCPF*DPQVCTNRVGRGAA
Trigger: TGCGGCCCCGCGGCCAACCCGGTTGGTGCAGACTTGGGGATCCCAGAAGGGACAGTGCCCGCCCAGTCGCGGCGATTGAGGGTCCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CCA 90 bp GCTGGCCCGAGCTGCGCCCGGACAGGGACCCTCAATCGCCGCGACTaGGCGGGCACTGTCCCTTCTGGGATCCCCAAGTCTGCACCAACC +
Preference number: 5 (lower is better)
Translates to: AGPSCARTGTLNRRD*AGTVPSGIPKSAPT
Trigger: GGTTGGTGCAGACTTGGGGATCCCAGAAGGGACAGTGCCCGCCCAGTCGCGGCGATTGAGGGTCCCTGTCCGGGCGCAGCTCGGGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 90 bp CCAGGCACACGAAGTGCGGCATCACCGCCTGGTAACTGGAGCAGATaGCCATCAGCTCGCCGGGCTTGGCGGCCATGGCGCCTCCGGCGT +
Preference number: 5 (lower is better)
Translates to: PGTRSAASPPGNWSR*PSARRAWRPWRLRR
Trigger: ACGCCGGAGGCGCCATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACCAGGCGGTGATGCCGCACTTCGTGTGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CCA 90 bp ACTCGTCGGCCAGGCACACGAAGTGCGGCATCACCGCCTGGTAACTaGAGCAGATGCCCATCAGCTCGCCGGGCTTGGCGGCCATGGCGC +
Preference number: 5 (lower is better)
Translates to: TRRPGTRSAASPPGN*SRCPSARRAWRPWR
Trigger: GCGCCATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACCAGGCGGTGATGCCGCACTTCGTGTGCCTGGCCGACGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 90 bp GAGTCCAGGCTGTTCCTCAGTTTGCAGCTGCTGAGCTGCTCCCGCTaGAGCGACAGGCTCTGCGTGCTGCGGCGCAGGCACTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ESRLFLSLQLLSCSR*SDRLCVLRRRHSRL
Trigger: GAGCCTGGAGTGCCTGCGCCGCAGCACGCAGAGCCTGTCGCTGCAGCGGGAGCAGCTCAGCAGCTGCAAACTGAGGAACAGCCTGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS TCA 90 bp GCGGCTTATATAGCCCGCGGCTGCCCACACGGCTCTGAGCTCGGATaGCAGCGAATGCCATTTAAAGCGTGCGCGCCCCGCGCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: AAYIARGCPHGSELG*QRMPFKACAPRALP
Trigger: CGGAAGGGCGCGGGGCGCGCACGCTTTAAATGGCATTCGCTGTCATCCGAGCTCAGAGCCGTGTGGGCAGCCGCGGGCTATATAAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS TCA 90 bp AGTCGGAGTCGCTGGAGTCCAGGCTGTTCCTCAGTTTGCAGCTGCTaGGCTGCTCCCGCTGCAGCGACAGGCTCTGCGTGCTGCGGCGCA +
Preference number: 5 (lower is better)
Translates to: SRSRWSPGCSSVCSC*AAPAAATGSACCGA
Trigger: TGCGCCGCAGCACGCAGAGCCTGTCGCTGCAGCGGGAGCAGCTCAGCAGCTGCAAACTGAGGAACAGCCTGGACTCCAGCGACTCCGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 90 bp TGCAGCGACAGGCTCTGCGTGCTGCGGCGCAGGCACTCCAGGCTCTaGAGGAACGACTTCTTGGCCTTCTCCTCCTCCATGGGGGACACC +
Preference number: 5 (lower is better)
Translates to: CSDRLCVLRRRHSRL*RNDFLAFSSSMGDT
Trigger: GGTGTCCCCCATGGAGGAGGAGAAGGCCAAGAAGTCGTTCCTGCAGAGCCTGGAGTGCCTGCGCCGCAGCACGCAGAGCCTGTCGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS-3UTR CAA 90 bp AAGGGCATGGAGTGGCTACCCGCCGCCGACTCAGCGCGGGCGCGCCTCCCCGCATGTGCAAAATCGGAGTaGCAAACCATCGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: KGMEWLPAADSARARLPACAKSE*QTIGQG
Trigger: CCCTTGTCCGATGGTTTGCAACTCCGATTTTGCACA...TGCGGGGAGGCGCGCCCGCGCTGAGTCGGCGGCGGGTAGCCACTCCATGCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617612.3
CDS CCA 90 bp TGGCCTCAAGCTGCAGCAGGGATCCTTGCCACATATCCAGCCACCTaGCTGGTGCAGCGTGGAGACGATCAATACCACTCCTTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: WPQAAAGILATYPAT*LVQRGDDQYHSLEG
Trigger: GCCCTCCAAGGAGTGGTATTGATCGTCTCCACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGGATCCCTGCTGCAGCTTGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 90 bp AAGCTGCAGCAGGGATCCTTGCCACATATCCAGCCACCTGGCTGGTaGAGCGTGGAGACGATCAATACCACTCCTTGGAGGGCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: KLQQGSLPHIQPPGW*SVETINTTPWRAVP
Trigger: TGGGACAGCCCTCCAAGGAGTGGTATTGATCGTCTCCACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGGATCCCTGCTGCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CAA 90 bp CGAGACTGGCGCGGCCGCCGCAGCCGGCCCCGGCCCTTGGGCAGCTaGGCGGGCCGCACGGGCTGCGGGAACTCGTCGGCCAGGCACACG +
Preference number: 6 (lower is better)
Translates to: RDWRGRRSRPRPLGS*AGRTGCGNSSARHT
Trigger: CGTGTGCCTGGCCGACGAGTTCCCGCAGCCCGTGCGGCCCGCCAAGCTGCCCAAGGGCCGGGGCCGGCTGCGGCGGCCGCGCCAGTCTCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CCA 72 bp AGCAGATGCCCATCAGCTCGCCGGGCTTGGCGGCCATaGCGCCTCCGGCGTCTGCGGGGCCGGGCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: SRCPSARRAWRP*RLRRLRGRAAG
Trigger: CCCCGCCGCCCGGCCCCGCAGACGCCGGAGGCGCCATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CAA 90 bp GTCTTGAAGCGAGACTGGCGCGGCCGCCGCAGCCGGCCCCGGCCCTaGGGCAGCTTGGCGGGCCGCACGGGCTGCGGGAACTCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: VLKRDWRGRRSRPRP*GSLAGRTGCGNSSA
Trigger: GGCCGACGAGTTCCCGCAGCCCGTGCGGCCCGCCAAGCTGCCCAAGGGCCGGGGCCGGCTGCGGCGGCCGCGCCAGTCTCGCTTCAAGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 72 bp CGCTCCGAGGCGCTCGCCGCCGCTGCTGTCGCCGTCTaGCCCGCGGCGGCCAGGCTCGCGGCTTATATAGCC +
Preference number: 6 (lower is better)
Translates to: RSEALAAAAVAV*PAAARLAAYIA
Trigger: GGCTATATAAGCCGCGAGCCTGGCCGCCGCGGGGCAGACGGCGACAGCAGCGGCGGCGAGCGCCTCGGAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 72 bp CCCCGGCCCTTGGGCAGCTTGGCGGGCCGCACGGGCTaGGGGAACTCGTCGGCCAGGCACACGAAGTGCGGC +
Preference number: 6 (lower is better)
Translates to: PRPLGSLAGRTG*GNSSARHTKCG
Trigger: GCCGCACTTCGTGTGCCTGGCCGACGAGTTCCCGCAGCCCGTGCGGCCCGCCAAGCTGCCCAAGGGCCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CCA 72 bp GGTAACTGGAGCAGATGCCCATCAGCTCGCCGGGCTTaGCGGCCATGGCGCCTCCGGCGTCTGCGGGGCCGG +
Preference number: 6 (lower is better)
Translates to: GNWSRCPSARRA*RPWRLRRLRGR
Trigger: CCGGCCCCGCAGACGCCGGAGGCGCCATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS TCA 72 bp CCTCCTGGATCTCGTCGAAGGTCACCGGCTGCGTCTTaGAGCGAGACTGGCGCGGCCGCCGCAGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: PPGSRRRSPAAS*SETGAAAAAGP
Trigger: GGGGCCGGCTGCGGCGGCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGACCTTCGACGAGATCCAGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 72 bp CTGGGCGGGCACTGTCCCTTCTGGGATCCCCAAGTCTaGACCAACCGGGTTGGCCGCGGGGCCGCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: LGGHCPFWDPQV*TNRVGRGAAGP
Trigger: GGGACCTGCGGCCCCGCGGCCAACCCGGTTGGTGCAGACTTGGGGATCCCAGAAGGGACAGTGCCCGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CAA 90 bp TCCTCCTCCACCTCCTGGATCTCGTCGAAGGTCACCGGCTGCGTCTaGAAGCGAGACTGGCGCGGCCGCCGCAGCCGGCCCCGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: SSSTSWISSKVTGCV*KRDWRGRRSRPRPL
Trigger: CAAGGGCCGGGGCCGGCTGCGGCGGCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGACCTTCGACGAGATCCAGGAGGTGGAGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 72 bp CAGCTGCTGAGCTGCTCCCGCTGCAGCGACAGGCTCTaGGTGCTGCGGCGCAGGCACTCCAGGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: QLLSCSRCSDRL*VLRRRHSRLCR
Trigger: CCTGCAGAGCCTGGAGTGCCTGCGCCGCAGCACGCAGAGCCTGTCGCTGCAGCGGGAGCAGCTCAGCAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CAA 72 bp ACCTCCTGGATCTCGTCGAAGGTCACCGGCTGCGTCTaGAAGCGAGACTGGCGCGGCCGCCGCAGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: TSWISSKVTGCV*KRDWRGRRSRP
Trigger: GGGCCGGCTGCGGCGGCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGACCTTCGACGAGATCCAGGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 72 bp CGAAGTGCGGCATCACCGCCTGGTAACTGGAGCAGATaGCCATCAGCTCGCCGGGCTTGGCGGCCATGGCGC +
Preference number: 6 (lower is better)
Translates to: RSAASPPGNWSR*PSARRAWRPWR
Trigger: GCGCCATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACCAGGCGGTGATGCCGCACTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 72 bp TCCTCCACCTCCTGGATCTCGTCGAAGGTCACCGGCTaGGTCTTGAAGCGAGACTGGCGCGGCCGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SSTSWISSKVTG*VLKRDWRGRRS
Trigger: GCTGCGGCGGCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGACCTTCGACGAGATCCAGGAGGTGGAGGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CCA 72 bp CCTCAATCGCCGCGACTGGGCGGGCACTGTCCCTTCTaGGATCCCCAAGTCTGCACCAACCGGGTTGGCCGC +
Preference number: 6 (lower is better)
Translates to: PQSPRLGGHCPF*DPQVCTNRVGR
Trigger: GCGGCCAACCCGGTTGGTGCAGACTTGGGGATCCCAGAAGGGACAGTGCCCGCCCAGTCGCGGCGATTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CCA 72 bp AGCTGCGCCCGGACAGGGACCCTCAATCGCCGCGACTaGGCGGGCACTGTCCCTTCTGGGATCCCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: SCARTGTLNRRD*AGTVPSGIPKS
Trigger: AGACTTGGGGATCCCAGAAGGGACAGTGCCCGCCCAGTCGCGGCGATTGAGGGTCCCTGTCCGGGCGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 72 bp GCTGCCCACACGGCTCTGAGCTCGGATGACAGCGAATaGCATTTAAAGCGTGCGCGCCCCGCGCCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: AAHTALSSDDSE*HLKRARPAPFR
Trigger: GCGGAAGGGCGCGGGGCGCGCACGCTTTAAATGGCATTCGCTGTCATCCGAGCTCAGAGCCGTGTGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS TCA 72 bp CGCTGGAGTCCAGGCTGTTCCTCAGTTTGCAGCTGCTaGGCTGCTCCCGCTGCAGCGACAGGCTCTGCGTGC +
Preference number: 6 (lower is better)
Translates to: RWSPGCSSVCSC*AAPAAATGSAC
Trigger: GCACGCAGAGCCTGTCGCTGCAGCGGGAGCAGCTCAGCAGCTGCAAACTGAGGAACAGCCTGGACTCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS GCA 72 bp GAGTCCAGGCTGTTCCTCAGTTTGCAGCTGCTGAGCTaGTCCCGCTGCAGCGACAGGCTCTGCGTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: ESRLFLSLQLLS*SRCSDRLCVLR
Trigger: CCGCAGCACGCAGAGCCTGTCGCTGCAGCGGGAGCAGCTCAGCAGCTGCAAACTGAGGAACAGCCTGGACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CCA 72 bp GGCGCAGGCACTCCAGGCTCTGCAGGAACGACTTCTTaGCCTTCTCCTCCTCCATGGGGGACACCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: GAGTPGSAGTTS*PSPPPWGTPPP
Trigger: AGGAGGGGGTGTCCCCCATGGAGGAGGAGAAGGCCAAGAAGTCGTTCCTGCAGAGCCTGGAGTGCCTGCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339446.3
ENST00000617612.3
CDS CAA 90 bp CCAGCCACCTGGCTGGTGCAGCGTGGAGACGATCAATACCACTCCTaGGAGGGCTGTCCCAGTAGGCACCGTGACCTTCTGGGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: PATWLVQRGDDQYHS*EGCPSRHRDLLGLL
Trigger: AAGCAGCCCCAGAAGGTCACGGTGCCTACTGGGACAGCCCTCCAAGGAGTGGTATTGATCGTCTCCACGCTGCACCAGCCAGGTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CCA 72 bp CCTTGCCACATATCCAGCCACCTGGCTGGTGCAGCGTaGAGACGATCAATACCACTCCTTGGAGGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: PCHISSHLAGAA*RRSIPLLGGLS
Trigger: GGACAGCCCTCCAAGGAGTGGTATTGATCGTCTCCACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CCA 72 bp GCTGCAGCAGGGATCCTTGCCACATATCCAGCCACCTaGCTGGTGCAGCGTGGAGACGATCAATACCACTCC +
Preference number: 6 (lower is better)
Translates to: AAAGILATYPAT*LVQRGDDQYHS
Trigger: GGAGTGGTATTGATCGTCTCCACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGGATCCCTGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 72 bp CAGGGATCCTTGCCACATATCCAGCCACCTGGCTGGTaGAGCGTGGAGACGATCAATACCACTCCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: QGSLPHIQPPGW*SVETINTTPWR
Trigger: CCTCCAAGGAGTGGTATTGATCGTCTCCACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGGATCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS GCA 72 bp AGTTTGAAAGTGGCCTCAAGCTGCAGCAGGGATCCTTaGCACATATCCAGCCACCTGGCTGGTGCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: SLKVASSCSRDP*HISSHLAGAAW
Trigger: CCACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGGATCCCTGCTGCAGCTTGAGGCCACTTTCAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3
CDS CAA 72 bp GAGTTTGAAAGTGGCCTCAAGCTGCAGCAGGGATCCTaGCCACATATCCAGCCACCTGGCTGGTGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: EFESGLKLQQGS*PHIQPPGWCSV
Trigger: CACGCTGCACCAGCCAGGTGGCTGGATATGTGGCAAGGATCCCTGCTGCAGCTTGAGGCCACTTTCAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339446.3