RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF95 (Homo sapiens)

Ensembl gene IDs: ENSG00000188070

Ensembl transcript IDs: ENST00000338498.6, ENST00000433688.2, ENST00000445014.3, ENST00000546282.3

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTaGCCCCACCCGATCCCCCGTCTCCGCCCGGCCCGGCCAGCGGGG +
Preference number: 1 (lower is better)
Translates to: APTGSGTQVAPRRRR*PHPIPRLRPARPAG
Trigger: CCCCGCTGGCCGGGCCGGGCGGAGACGGGGGATCGGGTGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 90 bp AGCGGCCTGGGAGGAGAGTGGGGCCGCCGGGCGCACGGTTCTCACTaGGCCTGCCGGGGAGGTAAGCGCAGCTGGTCCAGCCCGGGCCCC +
Preference number: 1 (lower is better)
Translates to: SGLGGEWGRRAHGSH*ACRGGKRSWSSPGP
Trigger: GGGGCCCGGGCTGGACCAGCTGCGCTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGCCCGGCGGCCCCACTCTCCTCCCAGGCCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp GGGCTCCGGGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTaGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCA +
Preference number: 1 (lower is better)
Translates to: GLRADGRVRFPQRTD*LRDPSGTAQTPVAP
Trigger: TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCCCGGAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp GAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGTaGCACCGCGCAGACGCCGGTGGCCCCACCCGATCCCCCGTCTCC +
Preference number: 1 (lower is better)
Translates to: ESALPAAHRLAQGPK*HRADAGGPTRSPVS
Trigger: GGAGACGGGGGATCGGGTGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp GCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTaGGGAGGGGAAGGACGATTGGATGGCGCCTTCCAGCTGAGGCCC +
Preference number: 1 (lower is better)
Translates to: AALGPAAAAPPLEFC*GGEGRLDGAFQLRP
Trigger: GGGCCTCAGCTGGAAGGCGCCATCCAATCGTCCTTCCCCTCCCCAGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp TGCGGGTTGAGAACGGACGCCGCATCCACCGCGGACAAAGGGGGATaGGGATGGGGCGGGAATCGAAGGCTGACTGCCGGGACCGCCTGT +
Preference number: 1 (lower is better)
Translates to: CGLRTDAASTADKGG*GWGGNRRLTAGTAC
Trigger: ACAGGCGGTCCCGGCAGTCAGCCTTCGATTCCCGCCCCATCCCCATCCCCCTTTGTCCGCGGTGGATGCGGCGTCCGTTCTCAACCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp CCCCGCCCCGGCTTTAGGACCGCGGGAACTGTTCCTGCAGCAGCCTaGCTTTGTGAAGAGCAGACAGTAGGGCCCGGAGTCTCCCAGCGG +
Preference number: 1 (lower is better)
Translates to: PRPGFRTAGTVPAAA*LCEEQTVGPGVSQR
Trigger: CCGCTGGGAGACTCCGGGCCCTACTGTCTGCTCTTCACAAAGCCAGGCTGCTGCAGGAACAGTTCCCGCGGTCCTAAAGCCGGGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp GTTCTCCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTaGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGCGGCT +
Preference number: 1 (lower is better)
Translates to: VLHRRMNLHIPLGPA*EIAGPHPCHTGPAA
Trigger: AGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 90 bp ACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTCTCGGACCTaGCTGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: TCSPQENESTHPSRT*LGDRGAPSLPHRAC
Trigger: GCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 90 bp AGTTCTGCTGGGGAGGGGAAGGACGATTGGATGGCGCCTTCCAGCTaGGGCCCTGCAGAGCTCAGTGTGCTCATCCCAAGGCAGTGTGCA +
Preference number: 1 (lower is better)
Translates to: SSAGEGKDDWMAPSS*GPAELSVLIPRQCA
Trigger: TGCACACTGCCTTGGGATGAGCACACTGAGCTCTGCAGGGCCTCAGCTGGAAGGCGCCATCCAATCGTCCTTCCCCTCCCCAGCAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 90 bp CCTGCAGAGCTCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTaGCACCTTCAGGAGTCACAGATCCACCGTGGTGGCCTGCATTGC +
Preference number: 1 (lower is better)
Translates to: PAELSVLIPRQCAGL*HLQESQIHRGGLHC
Trigger: GCAATGCAGGCCACCACGGTGGATCTGTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGAGCTCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 90 bp ACGATTGGATGGCGCCTTCCAGCTGAGGCCCTGCAGAGCTCAGTGTaGTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGT +
Preference number: 1 (lower is better)
Translates to: TIGWRLPAEALQSSV*SSQGSVQGFATFRS
Trigger: ACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGAGCTCTGCAGGGCCTCAGCTGGAAGGCGCCATCCAATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 90 bp TCACTACCGCAGCCCTTCCCTTTCACTGGTGCCCGGCACTTCAGCTaGATCAAGATCAATGGAGGGCTCATGAAAACACTGCTAGGCCCC +
Preference number: 1 (lower is better)
Translates to: SLPQPFPFTGARHFS*IKINGGLMKTLLGP
Trigger: GGGGCCTAGCAGTGTTTTCATGAGCCCTCCATTGATCTTGATGCAGCTGAAGTGCCGGGCACCAGTGAAAGGGAAGGGCTGCGGTAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 90 bp CAGGGCTTTGCCACCTTCAGGAGTCACAGATCCACCGTGGTGGCCTaGATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACAAATTTT +
Preference number: 1 (lower is better)
Translates to: QGFATFRSHRSTVVA*IAQHVNPSAGLTNF
Trigger: AAAATTTGTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGATCTGTGACTCCTGAAGGTGGCAAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp ATGCTGCTGGTCTCAGGGACACACTTTGAGAGCCACTGGTGTGTTTaGGGCTGTCTCAGTAAAGATGTCCACTCTCCTGAGGCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: MLLVSGTHFESHWCV*GCLSKDVHSPEASL
Trigger: GAGAGAGGCCTCAGGAGAGTGGACATCTTTACTGAGACAGCCCCAAACACACCAGTGGCTCTCAAAGTGTGTCCCTGAGACCAGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 90 bp CCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTaGCAAATTTTAATAACTGACCAGCGAATTGGGAAGCAGTGTGGC +
Preference number: 1 (lower is better)
Translates to: PWWPALPSMSILRQA*QILITDQRIGKQCG
Trigger: GCCACACTGCTTCCCAATTCGCTGGTCAGTTATTAAAATTTGTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 90 bp GCAGGAATCAATGGAATCACTACCGCAGCCCTTCCCTTTCACTGGTaGCCGGCACTTCAGCTGCATCAAGATCAATGGAGGGCTCATGAA +
Preference number: 1 (lower is better)
Translates to: AGINGITTAALPFHW*PALQLHQDQWRAHE
Trigger: TTCATGAGCCCTCCATTGATCTTGATGCAGCTGAAGTGCCGGGCACCAGTGAAAGGGAAGGGCTGCGGTAGTGATTCCATTGATTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp CCTAAGGTGATGCTGCTGGTCTCAGGGACACACTTTGAGAGCCACTaGTGTGTTTGGGGCTGTCTCAGTAAAGATGTCCACTCTCCTGAG +
Preference number: 1 (lower is better)
Translates to: PKVMLLVSGTHFESH*CVWGCLSKDVHSPE
Trigger: CTCAGGAGAGTGGACATCTTTACTGAGACAGCCCCAAACACACCAGTGGCTCTCAAAGTGTGTCCCTGAGACCAGCAGCATCACCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp TTTCAGTCAATTGACAACCCATTCAGGATCTTCCTGAATCCCTGGTaGCCTCCACAACAAAAAGCACAAAGCCCCCTGCCGAGGCAGCCT +
Preference number: 1 (lower is better)
Translates to: FQSIDNPFRIFLNPW*PPQQKAQSPLPRQP
Trigger: AGGCTGCCTCGGCAGGGGGCTTTGTGCTTTTTGTTGTGGAGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 90 bp AAAGCAGGAATCAATGGAATCACTACCGCAGCCCTTCCCTTTCACTaGTGCCCGGCACTTCAGCTGCATCAAGATCAATGGAGGGCTCAT +
Preference number: 1 (lower is better)
Translates to: KAGINGITTAALPFH*CPALQLHQDQWRAH
Trigger: ATGAGCCCTCCATTGATCTTGATGCAGCTGAAGTGCCGGGCACCAGTGAAAGGGAAGGGCTGCGGTAGTGATTCCATTGATTCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 90 bp CTGGGGTATGGCCCAAGAATTTTTATTTCTAGCAGATTCCTAAGGTaGTGCTGCTGGTCTCAGGGACACACTTTGAGAGCCACTGGTGTG +
Preference number: 1 (lower is better)
Translates to: LGYGPRIFISSRFLR*CCWSQGHTLRATGV
Trigger: CACACCAGTGGCTCTCAAAGTGTGTCCCTGAGACCAGCAGCATCACCTTAGGAATCTGCTAGAAATAAAAATTCTTGGGCCATACCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 90 bp AACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTaGCAACCCATTCAGGATCTTCCTGAATCCCTGGTGGCCTCCACA +
Preference number: 1 (lower is better)
Translates to: NRGGSNSLGIYFSVN*QPIQDLPESLVAST
Trigger: TGTGGAGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR TCA 90 bp GGGAATCGAAGGCTGACTGCCGGGACCGCCTGTGCCCCGGGCTCCCACGGACTTGGCCCTAATACTGACTaGCGGCGCCCCCAGTCCCGG +
Preference number: 2 (lower is better)
Translates to: GNRRLTAGTACAPGSHGLGPNTD*RRPQSR
Trigger: CCGGGACTGGGGGCGCCGTCAGTCAGTATTAGGGCC...AAGTCCGTGGGAGCCCGGGGCACAGGCGGTCCCGGCAGTCAGCCTTCGATTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CCA 90 bp GCCGGGCGCACGGTTCTCACTGAGCCTGCCGGGGAGGTAAGCGCAGCTGGTCCAGATTCTCGGAAAACGTaGGCCCTGCGCGGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: AGRTVLTEPAGEVSAAGPDSRKT*ALRGEG
Trigger: GCCCTCCCCGCGCAGGGCCCACGTTTTCCGAGAATC...TGGACCAGCTGCGCTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACTGCCGGGACCGCCTGTaGCCCGGGCTCCCACGGACT +
Preference number: 2 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDCRDRL*PGLPRT
Trigger: AGTCCGTGGGAGCCCGGGGCACAGGCGGTCCCGGCA...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR TCA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTACACGTGGAGGCCACTaGGGATTCTCGGAAAACGTG +
Preference number: 2 (lower is better)
Translates to: LPRQPWALRQPPHLWSSATRGGH*GFSENV
Trigger: CACGTTTTCCGAGAATCCTCAGTGGCCTCCACGTGT...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTTCCACCGTGGTGGCCTaGATTGCCCAGCATGTCAAT +
Preference number: 2 (lower is better)
Translates to: LPRQPWALRQPPHLWSSASTVVA*IAQHVN
Trigger: ATTGACATGCTGGGCAATGCAGGCCACCACGGTGGA...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR TCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACGCGGGAATCGAAGGCTaGCTGCCGGGACCGCCTGTG +
Preference number: 2 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDAGIEG*LPGPPV
Trigger: CACAGGCGGTCCCGGCAGTCAGCCTTCGATTCCCGC...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACGCGGGGCCCCATCCCTaGCACACAGGGCCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHAGPHP*HTGPAA
Trigger: AGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGC...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACCATCCCTCTCGGACCTaGCTGGGAGATCGCGGGGCC +
Preference number: 2 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDHPSRT*LGDRGA
Trigger: GGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATG...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTCCCGGCCCCAGGCCCTaGGGGTTGAGAACGGACGCC +
Preference number: 2 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPPGPRP*GLRTDA
Trigger: GGCGTCCGTTCTCAACCCGCAGGGCCTGGGGCCGGG...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CCA 90 bp GGCACACCTAGGCAAGAGGGCCAACTCAACTTGCAACGTCTAACCTGTGAGGCCGCTCAGGGACCCAAGTaGCACCGCGCAGACGCCGGT +
Preference number: 2 (lower is better)
Translates to: GTPRQEGQLNLQRLTCEAAQGPK*HRADAG
Trigger: ACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGC...GGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACCCGTGCCTGCCAGCGTaGAAGGCTGCAGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHPCLPA*KAAGNW
Trigger: CCAGTTCCCTGCAGCCTTGCACGCTGGCAGGCACGG...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR TCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACAGCAGCCTGGCTTTGTaGAGAGCAGACAGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHSSLAL*RADSRA
Trigger: GGCCCTACTGTCTGCTCTTCACAAAGCCAGGCTGCT...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CCA 90 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGGGCTCCCACGGACTTaGTTTAGGGGTAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: PQENESTHPSRTCLGDRGGLPRT*FRGKQR
Trigger: TCTCTGCTTACCCCTAAACCAAGTCCGTGGGAGCCC...CCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR GCA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCAGCCGGGAGCCGTGCCTaGCAGCGTGCAAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPAGSRA*QRARLQ
Trigger: CTGCAGCCTTGCACGCTGGCAGGCACGGCTCCCGGC...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CCA 90 bp GCCATCCATAATCTCCGTTCTCAAGCTTTTAATACTGTCTCAAAAACCGTGGAGCAGCCGCCCCACCTCTaGAGTTCTGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: AIHNLRSQAFNTVSKTVEQPPHL*SSAGEG
Trigger: CCCCTCCCCAGCAGAACTCCAGAGGTGGGGCGGCTG...CTCCACGGTTTTTGAGACAGTATTAAAAGCTTGAGAACGGAGATTATGGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CAA 90 bp ATCCCAAGGCAAGGAGGCACACCTAGGCAAGAGGGCCAACTCAACTaGCAACGTCTAACCTGTGAGGCCATAACTTCCATCAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: IPRQGGTPRQEGQLN*QRLTCEAITSIKAG
Trigger: TCCTGCTTTGATGGAAGTTATGGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCCTCCTTGCCTTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR TCA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCAGCGCACGGTTCTCACTaGGCCTGCCGGGGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPAHGSH*ACRGGK
Trigger: CTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGC...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CCA 90 bp ACCTTTGATAGGTCATGTCCGCACTCTGGGCCTGAGCTTCTTTGTCTGCAACGACACTGGCTAGCTGGCTaGTCTCTAAGCATCCTTCCA +
Preference number: 2 (lower is better)
Translates to: TFDRSCPHSGPELLCLQRHWLAG*SLSILP
Trigger: TGGAAGGATGCTTAGAGACCAGCCAGCTAGCCAGTG...TCGTTGCAGACAAAGAAGCTCAGGCCCAGAGTGCGGACATGACCTATCAAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
3UTR-3UTR GCA 90 bp ACTTTTCAGTCAATTGACAACCCATTCAGGATCTTCCTGAATCCCTGGTGGCCTCTCCTCTTTGCTCTCTaGCTTTCCACCCCGAGGCAG +
Preference number: 2 (lower is better)
Translates to: TFQSIDNPFRIFLNPWWPLLFAL*LSTPRQ
Trigger: CTGCCTCGGGGTGGAAAGGCAGAGAGCAAAGAGGAG...AGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CAA 90 bp CCCTGGCTTATCCGAACTTTGGCAGTGGGCTTGAGTGATTATAAATaGGTTCCCCCAATTTGCCTACTGTTTTTGAATGGGCAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: PWLIRTLAVGLSDYK*VPPICLLFLNGQSK
Trigger: TTTACTCTGCCCATTCAAAAACAGTAGGCAAATTGGGGGAACCAATTTATAATCACTCAAGCCCACTGCCAAAGTTCGGATAAGCCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp GGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTaGCCCCACCCGATCCCCCGTCTCCGCCCGGCCCGG +
Preference number: 3 (lower is better)
Translates to: GSGTQVAPRRRR*PHPIPRLRPAR
Trigger: CCGGGCCGGGCGGAGACGGGGGATCGGGTGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp AGGGCAGCCAGCAGCCCCCAAGCCGGGAGCCGTGCCTaGCAGCGTGCAAGGCTGCAGGGAACTGGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: RAASSPQAGSRA*QRARLQGTGPP
Trigger: TGGGGGCCCAGTTCCCTGCAGCCTTGCACGCTGGCAGGCACGGCTCCCGGCTTGGGGGCTGCTGGCTGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp CTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGTaGCACCGCGCAGACGCCGGTGGCCCCACCCGATCC +
Preference number: 3 (lower is better)
Translates to: LPAAHRLAQGPK*HRADAGGPTRS
Trigger: GGATCGGGTGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 72 bp GGAGGAGAGTGGGGCCGCCGGGCGCACGGTTCTCACTaGGCCTGCCGGGGAGGTAAGCGCAGCTGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: GGEWGRRAHGSH*ACRGGKRSWSS
Trigger: GCTGGACCAGCTGCGCTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGCCCGGCGGCCCCACTCTCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp GCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTaGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCG +
Preference number: 3 (lower is better)
Translates to: ADGRVRFPQRTD*LRDPSGTAQTP
Trigger: CGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp GGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTaGGGAGGGGAAGGACGATTGGATGGCGCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: GPAAAAPPLEFC*GGEGRLDGAFQ
Trigger: CTGGAAGGCGCCATCCAATCGTCCTTCCCCTCCCCAGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp GGGCGGGAATCGAAGGCTGACTGCCGGGACCGCCTGTaGCCCGGGCTCCCACGGACTTGGTTTAGGGGTAAG +
Preference number: 3 (lower is better)
Translates to: GRESKADCRDRL*PGLPRTWFRGK
Trigger: CTTACCCCTAAACCAAGTCCGTGGGAGCCCGGGGCACAGGCGGTCCCGGCAGTCAGCCTTCGATTCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp AGAACGGACGCCGCATCCACCGCGGACAAAGGGGGATaGGGATGGGGCGGGAATCGAAGGCTGACTGCCGGG +
Preference number: 3 (lower is better)
Translates to: RTDAASTADKGG*GWGGNRRLTAG
Trigger: CCCGGCAGTCAGCCTTCGATTCCCGCCCCATCCCCATCCCCCTTTGTCCGCGGTGGATGCGGCGTCCGTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp CTGCCTTTCCACCCCGAGGCAGGGGCTGGACCACGCTaGCCAGGCATCTCTTCCTCCAGACCCAACCCTCAA +
Preference number: 3 (lower is better)
Translates to: LPFHPEAGAGPR*PGISSSRPNPQ
Trigger: TTGAGGGTTGGGTCTGGAGGAAGAGATGCCTGGGCAGCGTGGTCCAGCCCCTGCCTCGGGGTGGAAAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp TGGCGCCTTCCAGCTGAGGCCCTGCAGAGCTCAGTGTaGTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACC +
Preference number: 3 (lower is better)
Translates to: WRLPAEALQSSV*SSQGSVQGFAT
Trigger: GGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGAGCTCTGCAGGGCCTCAGCTGGAAGGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp TCTTTGCTCTCTGCCTTTCCACCCCGAGGCAGGGGCTaGACCACGCTGCCCAGGCATCTCTTCCTCCAGACC +
Preference number: 3 (lower is better)
Translates to: SLLSAFPPRGRG*TTLPRHLFLQT
Trigger: GGTCTGGAGGAAGAGATGCCTGGGCAGCGTGGTCCAGCCCCTGCCTCGGGGTGGAAAGGCAGAGAGCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CAA 90 bp GGCACACCTAGGCAAGAGGGCCAACTCAACTTGCAACGTCTAACCTGTGAGGCCCCCAGGCCCTGCGGGTaGAGAACGGACGCCGCATCC +
Preference number: 3 (lower is better)
Translates to: GTPRQEGQLNLQRLTCEAPRPCG*RTDAAS
Trigger: GGATGCGGCGTCCGTTCTCAACCCGCAGGGCCTGGG...GGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTaGCTGGGAGATCGCGGGGCCCCATCCCTGCCACAC +
Preference number: 3 (lower is better)
Translates to: PQENESTHPSRT*LGDRGAPSLPH
Trigger: GTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp AGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTaGGAGATCGCGGGGCCCCATCCCTGCCACACAGGG +
Preference number: 3 (lower is better)
Translates to: RRMNLHIPLGPA*EIAGPHPCHTG
Trigger: CCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp TCTGGAGTTCTGCTGGGGAGGGGAAGGACGATTGGATaGCGCCTTCCAGCTGAGGCCCTGCAGAGCTCAGTG +
Preference number: 3 (lower is better)
Translates to: SGVLLGRGRTIG*RLPAEALQSSV
Trigger: CACTGAGCTCTGCAGGGCCTCAGCTGGAAGGCGCCATCCAATCGTCCTTCCCCTCCCCAGCAGAACTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp GCCACCTTCAGGAGTCACAGATCCACCGTGGTGGCCTaGATTGCCCAGCATGTCAATCCTTCGGCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: ATFRSHRSTVVA*IAQHVNPSAGL
Trigger: CAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGATCTGTGACTCCTGAAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp GGCTTTAGGACCGCGGGAACTGTTCCTGCAGCAGCCTaGCTTTGTGAAGAGCAGACAGTAGGGCCCGGAGTC +
Preference number: 3 (lower is better)
Translates to: GFRTAGTVPAAA*LCEEQTVGPGV
Trigger: GACTCCGGGCCCTACTGTCTGCTCTTCACAAAGCCAGGCTGCTGCAGGAACAGTTCCCGCGGTCCTAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp CTCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTaGCACCTTCAGGAGTCACAGATCCACCGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: LSVLIPRQCAGL*HLQESQIHRGG
Trigger: GCCACCACGGTGGATCTGTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CAA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACCCGTGGTGGCCTGCATaGCCCAGCATGTCAATCCTT +
Preference number: 3 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHPWWPA*PSMSIL
Trigger: AAGGATTGACATGCTGGGCAATGCAGGCCACCACGG...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp GCTTTGCCACCTTCAGGAGTCACAGATCCACCGTGGTaGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAG +
Preference number: 3 (lower is better)
Translates to: ALPPSGVTDPPW*PALPSMSILRQ
Trigger: CTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGATCTGTGACTCCTGAAGGTGGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR GCA 72 bp CTTCAGGAGTCACAGATCCACCGTGGTGGCCTGCATTaGCCAGCATGTCAATCCTTCGGCAGGCCTGACAAA +
Preference number: 3 (lower is better)
Translates to: LQESQIHRGGLH*PACQSFGRPDK
Trigger: TTTGTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGATCTGTGACTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp CACTCTGGGCCTGAGCTTCTTTGTCTGCAACGACACTaGCTAGCTGGCTGGTCTCTAAGCATCCTTCCAGCG +
Preference number: 3 (lower is better)
Translates to: HSGPELLCLQRH*LAGWSLSILPA
Trigger: CGCTGGAAGGATGCTTAGAGACCAGCCAGCTAGCCAGTGTCGTTGCAGACAAAGAAGCTCAGGCCCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
3UTR GCA 72 bp AATGGAATCACTACCGCAGCCCTTCCCTTTCACTGGTaGCCGGCACTTCAGCTGCATCAAGATCAATGGAGG +
Preference number: 3 (lower is better)
Translates to: NGITTAALPFHW*PALQLHQDQWR
Trigger: CCTCCATTGATCTTGATGCAGCTGAAGTGCCGGGCACCAGTGAAAGGGAAGGGCTGCGGTAGTGATTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp ACTGTCCCTACCTGGCTGTGTGATCATCTCGGTTCCTaGGCTCCAATTTACCTATCTGTGAAGGTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TVPTWLCDHLGS*APIYLSVKVRR
Trigger: CCTCCTCACCTTCACAGATAGGTAAATTGGAGCCCAGGAACCGAGATGATCACACAGCCAGGTAGGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp GTCTCAGGGACACACTTTGAGAGCCACTGGTGTGTTTaGGGCTGTCTCAGTAAAGATGTCCACTCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: VSGTHFESHWCV*GCLSKDVHSPE
Trigger: CTCAGGAGAGTGGACATCTTTACTGAGACAGCCCCAAACACACCAGTGGCTCTCAAAGTGTGTCCCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp ATGCTGCTGGTCTCAGGGACACACTTTGAGAGCCACTaGTGTGTTTGGGGCTGTCTCAGTAAAGATGTCCAC +
Preference number: 3 (lower is better)
Translates to: MLLVSGTHFESH*CVWGCLSKDVH
Trigger: GTGGACATCTTTACTGAGACAGCCCCAAACACACCAGTGGCTCTCAAAGTGTGTCCCTGAGACCAGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CCA 72 bp ATCAATGGAATCACTACCGCAGCCCTTCCCTTTCACTaGTGCCCGGCACTTCAGCTGCATCAAGATCAATGG +
Preference number: 3 (lower is better)
Translates to: INGITTAALPFH*CPALQLHQDQW
Trigger: CCATTGATCTTGATGCAGCTGAAGTGCCGGGCACCAGTGAAAGGGAAGGGCTGCGGTAGTGATTCCATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR-3UTR CAA 90 bp GGCACACCTAGGCAAGAGGGCCAACTCAACTTGCAACGTCTAACCTGTGAGGCCACTTTGGCAGTGGGCTaGAGTGATTATAAATTGGTT +
Preference number: 3 (lower is better)
Translates to: GTPRQEGQLNLQRLTCEATLAVG*SDYKLV
Trigger: AACCAATTTATAATCACTCAAGCCCACTGCCAAAGT...GGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 72 bp GTCAATCCTTCGGCAGGCCTGACAAATTTTAATAACTaGCCAGCGAATTGGGAAGCAGTGTGGCATCGTGCA +
Preference number: 3 (lower is better)
Translates to: VNPSAGLTNFNN*PANWEAVWHRA
Trigger: TGCACGATGCCACACTGCTTCCCAATTCGCTGGTCAGTTATTAAAATTTGTCAGGCCTGCCGAAGGATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 72 bp CCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTaGCAAATTTTAATAACTGACCAGCGAATTGGGAAG +
Preference number: 3 (lower is better)
Translates to: PALPSMSILRQA*QILITDQRIGK
Trigger: CTTCCCAATTCGCTGGTCAGTTATTAAAATTTGTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 72 bp GCAAGAGGGCCAACTCAACTTGCAACGTCTAACCTGTaGGGCCATAACTTCCATCAAAGCAGGAATCAATGG +
Preference number: 3 (lower is better)
Translates to: ARGPTQLATSNL*GHNFHQSRNQW
Trigger: CCATTGATTCCTGCTTTGATGGAAGTTATGGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 72 bp CTTTTCAGTCAATTGACAACCCATTCAGGATCTTCCTaGATCCCTGGTGGCCTCCACAACAAAAAGCACAAA +
Preference number: 3 (lower is better)
Translates to: LFSQLTTHSGSS*IPGGLHNKKHK
Trigger: TTTGTGCTTTTTGTTGTGGAGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR TCA 72 bp GGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTaGCAACCCATTCAGGATCTTCCTGAATCCCTGGTG +
Preference number: 3 (lower is better)
Translates to: GSNSLGIYFSVN*QPIQDLPESLV
Trigger: CACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGCCCAGGGCCAGCAGGTaGGCGGCCTTCTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRPRASR*AAFSLH
Trigger: GTGGAGCGAGAAGGCCGCCCACCTGCTGGCCCTGGG...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGACACAGCGCCAGACTTaGGGTCCGCGCCGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRTQRQT*GPRRRH
Trigger: GTGACGGCGGCGCGGACCTCAAGTCTGGCGCTGTGT...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR GCA 90 bp CGGTCCAACGCGCCTTCCCACCCCGGGAAGGCTCCCGAGCCCTGCGGCCCAGCCCTCCTCCTCCTCCTCTaGGGGCCCGGGCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSNAPSHPGKAPEPCGPALLLLL*GPGPLR
Trigger: CCTGAGAGGCCCGGGCCCGCAGAGGAGGAGGAGGAG...GGCTGGGCCGCAGGGCTCGGGAGCCTTCCCGGGGTGGGAAGGCGCGTTGGACCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGGCAGCCCCCACCAGCTaGGGCTTTGCCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRAAPTS*GFAWAL
Trigger: AAGGGCCCAGGCAAAGCCCCAGCTGGTGGGGGCTGC...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGCGGGAATCGAAGGCTaGCTGCCGGGACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TPDARVSQPKGRASTGRGAGIEG*LPGPPV
Trigger: CACAGGCGGTCCCGGCAGTCAGCCTTCGATTCCCGC...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCCCAGGCCGCGCCGGCTaGCGTCGTAGTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TPDARVSQPKGRASTGRGPGRAG*RRSPSG
Trigger: ACCTGATGGACTACGACGGCAGCCGGCGCGGCCTGG...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR GCA 90 bp CGGTCCAACGCGCCTTCCCACCCCGGGAAGGCTCCCGAGCCCTGCGGCCCAGCCCCAAGCCGGGAGCCGTaGCTGCCAGCGTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RSNAPSHPGKAPEPCGPAPSREP*LPACKA
Trigger: AGCCTTGCACGCTGGCAGGCACGGCTCCCGGCTTGG...GGCTGGGCCGCAGGGCTCGGGAGCCTTCCCGGGGTGGGAAGGCGCGTTGGACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGTGCCGGGACCGCCTGTaGCCCGGGCTCCCACGGACT +
Preference number: 4 (lower is better)
Translates to: ANTGREGLPAEGPGEHRACRDRL*PGLPRT
Trigger: AGTCCGTGGGAGCCCGGGGCACAGGCGGTCCCGGCA...CGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp AACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCAGCGGAACGTCGCCTaGGCCCTTGGGCGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: NTGREGLPAEGPGEHRAGQRNVA*ALGRAS
Trigger: GCTTGCCCGCCCAAGGGCCCAGGCGACGTTCCGCTG...CCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338498.6
CDS-3UTR CCA 90 bp CGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCGGAGGTAAGCGCAGCTaGTCCAGCCCGGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: REALTPDARVSQPKGRASGGKRS*SSPGPG
Trigger: CCCGGGGCCCGGGCTGGACCAGCTGCGCTTACCTCC...GCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCCAGCCGCCCCACCTCTaGAGTTCTGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TPDARVSQPKGRASTGRGQPPHL*SSAGEG
Trigger: CCCCTCCCCAGCAGAACTCCAGAGGTGGGGCGGCTG...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGCACCAGCTGGGGCTTTaGCTGGGCCCTTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LTPDARVSQPKGRASTGRHQLGL*LGPWAG
Trigger: GCCCGCCCAAGGGCCCAGGCAAAGCCCCAGCTGGTG...CCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTGCGGGGCCCCATCCCTaGCACACAGGGCCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LPRQPWALRQPPHLWSSAAGPHP*HTGPAA
Trigger: AGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGC...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCCTTGGGCGGGCAAGCTaGGACACCGGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: REALTPDARVSQPKGRASLGRAS*DTGPLL
Trigger: GAGGAGGGGGCCGGTGTCCCAGCTTGCCCGCCCAAG...GCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR CCA 90 bp GCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGTCGCCTGGGCCCTTaGGCGGGCAAGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: ALTPDARVSQPKGRASTGRRLGP*AGKLGH
Trigger: GTGTCCCAGCTTGCCCGCCCAAGGGCCCAGGCGACG...CCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338498.6
CDS-3UTR CCA 90 bp AAGCCCCCTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGGCTCAGGGACCCAAGTaGCACCGCGCAGACGCCGGT +
Preference number: 4 (lower is better)
Translates to: KPPAEAALGPAAAAPPLEAQGPK*HRADAG
Trigger: ACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGC...CTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAGGGGGCTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCCTCCGGGAGGCTaGGAGGCGCAGACGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TSLSDLPGRSRGPIPATQGPPGG*EAQTPS
Trigger: GCTCGGCGTCTGCGCCTCTCAGCCTCCCGGAGGGCC...CTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCACCAGGCCCTGCGGGTTaGGAACGGACGCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPPGPAG*ERTPHP
Trigger: TGGATGCGGCGTCCGTTCTCAACCCGCAGGGCCTGG...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGCCAGGCCGCGCCGGCTaGCGTCGTAGTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LTPDARVSQPKGRASTGRPGRAG*RRSPSG
Trigger: ACCTGATGGACTACGACGGCAGCCGGCGCGGCCTGG...CCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR GCA 90 bp CGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCCACAGGGCCTGCGGCTaGCACGGGGAAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: REALTPDARVSQPKGRASHRACG*HGEKRP
Trigger: CGGCCTCTTTTCCCCGTGGCAGCCGCAGGCCCTGTG...GCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp AAGCCCCCTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGGGGGCTGGACCACGCTaGCCAGGCATCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPPAEAALGPAAAAPPLEGAGPR*PGISSS
Trigger: GGAGGAAGAGATGCCTGGGCAGCGTGGTCCAGCCCC...CTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAGGGGGCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GGGAATCGAAGGCTGACTGCCGGGACCGCCTGTGCCCCGGGCTCCCACGGACTTCTGCTCCGGCTCCGGTaGTCCCCGCCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GNRRLTAGTACAPGSHGLLLRLR*SPPGSM
Trigger: CATGGAGCCCGGCGGGGACCACCGGAGCCGGAGCAG...AAGTCCGTGGGAGCCCGGGGCACAGGCGGTCCCGGCAGTCAGCCTTCGATTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTCGTCCAGGTGCAGGCTaGGCAGTGCCCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPRQPWALRQPPHLWSSARPGAG*AVPGHR
Trigger: CCTGTGGCCGGGCACTGCCCAGCCTGCACCTGGACG...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGAGGGCTCCGGGCCGATaGGAGAGTGCGCTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ANTGREGLPAEGPGEHRARAPGR*ESALPA
Trigger: TGCGGGAAGCGCACTCTCCCATCGGCCCGGAGCCCT...CGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp TGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGCGGCTGCCACGGGGGCACCCCCTTCCAGCTaGAGATCTTGCCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: WEIAGPHPCHTGPAAATGAPPSS*RSCPPS
Trigger: CGAAGGCGGGCAAGATCTTCAGCTGGAAGGGGGTGC...CCCCGTGGCAGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACGGCCCTAATACTGACTaGCGGCGCCCCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSANTGREGLPAEGPGEHGPNTD*RRPQSR
Trigger: CCGGGACTGGGGGCGCCGTCAGTCAGTATTAGGGCC...GTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCTGCCACACAGGGCCTaGGGCTGCCACGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ALTPDARVSQPKGRASTGLPHRA*GCHGEK
Trigger: CTTTTCCCCGTGGCAGCCGCAGGCCCTGTGTGGCAG...CCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCATCGCCTGGTGGGGACTaGGTGAGCTCAGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPSPGGD*VSSDSA
Trigger: GGCGCTGTCTGAGCTCACCCAGTCCCCACCAGGCGA...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCGCCTTCGTCTTCCTCTaGCTCCGCGCTGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: REALTPDARVSQPKGRASAFVFL*LRAAAR
Trigger: TCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGC...GCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCAGATTCTCGGAAAACGTaGGCCCTGCGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPDSRKT*ALRGEG
Trigger: GCCCTCCCCGCGCAGGGCCCACGTTTTCCGAGAATC...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGTCACAGATCCACCGTaGTGGCCTGCATTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TPDARVSQPKGRASTGRGVTDPP*WPALPS
Trigger: GCTGGGCAATGCAGGCCACCACGGTGGATCTGTGAC...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGGTGACCTTAGAAGAATaGGGAGGGGTCAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRVTLEE*GGVRGS
Trigger: AGACCCCCTGACCCCTCCTCATTCTTCTAAGGTCAC...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp ACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGGCCGATGGGAGAGTaGGCTTCCCGCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: TSLSDLPGRSRGPIPATQGPMGE*ASRSAP
Trigger: CGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCCC...CTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGGCCAGCGTGCAAGGCTaGAGGGAACTGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKASVQG*RELGPQ
Trigger: CTGGGGGCCCAGTTCCCTGCAGCCTTGCACGCTGGC...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp TGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGCGGCTGCCACGGGGCCACCTCTGGAGTTCTaGTGGGGAGGGGAAGGACGA +
Preference number: 4 (lower is better)
Translates to: WEIAGPHPCHTGPAAATGPPLEF*WGGEGR
Trigger: TCGTCCTTCCCCTCCCCAGCAGAACTCCAGAGGTGG...CCCCGTGGCAGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCTGCACCTGCAGGATGTaGCGCTTGATGGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: TPDARVSQPKGRASTGRGCTCRM*RLMVLT
Trigger: GGTGAGCACCATCAAGCGCCACATCCTGCAGGTGCA...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR CCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGCCGCAGCGCACCGACTaGCTCAGGGACCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKPQRTD*LRDPSG
Trigger: GCCACTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGG...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGCCCCATCCCTGCCACACAGCCCCGAGGCAGGGGCTaGACCACGCTGCCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TSLSDLPGRSRGPIPATQPRGRG*TTLPRH
Trigger: ATGCCTGGGCAGCGTGGTCCAGCCCCTGCCTCGGGG...CTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCACAGATCCACCGTGGTaGCCTGCATTGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TPDARVSQPKGRASTGRGTDPPW*PALPSM
Trigger: CATGCTGGGCAATGCAGGCCACCACGGTGGATCTGT...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACGGCGCTCCTCAGGCGTaGAGTCCATGGAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GSANTGREGLPAEGPGEHGAPQA*SPWRRG
Trigger: ACCCCTTCTCCATGGACTTCACGCCTGAGGAGCGCC...GTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR GCA 90 bp GCGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCCCCAGCCCCAGGTGTaGATCCCAGCTGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: AGSANTGREGLPAEGPGEPQPQV*IPAVAD
Trigger: ATCAGCAACAGCTGGGATGCACACCTGGGGCTGGGG...CTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR GCA 90 bp GCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGTCCATGGAGAAGGGGTaGACCTGCAGGATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ALTPDARVSQPKGRASTGSMEKG*TCRMWR
Trigger: GCGCCACATCCTGCAGGTGCACCCCTTCTCCATGGA...CCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGGGTCACGGCCAGGGATaGGGCTCTTTCCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKGHGQG*GSFQAS
Trigger: CGAGGCCTGGAAAGAGCCGCATCCCTGGCCGTGACC...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGGGGTGGCCAGGGAGCTaGCGCACACCATGCACACCA +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKGWPGS*RTPCTP
Trigger: TGGTGTGCATGGTGTGCGGCAGCTCCCTGGCCACCC...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACACCGTGCCTGCCAGCGTaGAAGGCTGCAGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: EALTPDARVSQPKGRASTPCLPA*KAAGNW
Trigger: CCAGTTCCCTGCAGCCTTGCACGCTGGCAGGCACGG...TGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGGAATCGAAGGCTGACTaGCGGGACCGCCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKESKAD*RDRLCP
Trigger: GGGGCACAGGCGGTCCCGGCAGTCAGCCTTCGATTC...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGCCTCCAGGATAGTCTaGCGCTCCTCAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LTPDARVSQPKGRASTGRASRIV*RSSGVK
Trigger: CTTCACGCCTGAGGAGCGCCAGACTATCCTGGAGGC...CCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR CCA 90 bp CCTTTACAAGAGCTTTCCTGGAGGGCGTGGCAGCGGCCTGGGAGGAGAGTGGGGGGCCCAGCCTCCCGCTaGAAGCCCCAGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLQELSWRAWQRPGRRVGGPASR*KPQSAA
Trigger: GGCTGCGGACTGGGGCTTCCAGCGGGAGGCTGGGCC...CCCCACTCTCCTCCCAGGCCGCTGCCACGCCCTCCAGGAAAGCTCTTGTAAAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGCACTTTGAGAGCCACTaGTGTGTTTGGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRHFESH*CVWGCL
Trigger: GAGACAGCCCCAAACACACCAGTGGCTCTCAAAGTG...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp CTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGAGCAGCCTGGCTTTGTaGAGAGCAGACAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTPDARVSQPKGRASTGRSSLAL*RADSRA
Trigger: GGCCCTACTGTCTGCTCTTCACAAAGCCAGGCTGCT...CCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp TGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGCGGCTGCCACGGGGCATTCAGGATCTTCCTaGATCCCTGGTGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: WEIAGPHPCHTGPAAATGHSGSS*IPGGLH
Trigger: GTGGAGGCCACCAGGGATTCAGGAAGATCCTGAATG...CCCCGTGGCAGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GCGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCTCCTCTTTGCTCTCTaGCTTTCCACCCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSANTGREGLPAEGPGELLFAL*LSTPRQ
Trigger: CTGCCTCGGGGTGGAAAGGCAGAGAGCAAAGAGGAG...CTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CGGTCCAACGCGCCTTCCCACCCCGGGAAGGCTCCCGAGCCCTGCGGCCCAGCCCTCTTCCTTTACGTCTaGGGGGCTGAGATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RSNAPSHPGKAPEPCGPALFLYV*GAEILR
Trigger: TCTCAGGATCTCAGCCCCCCAGACGTAAAGGAAGAG...GGCTGGGCCGCAGGGCTCGGGAGCCTTCCCGGGGTGGGAAGGCGCGTTGGACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCGCTCCTCAGGCGTaGAGTCCATGGAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: TSLSDLPGRSRGPIPATQGAPQA*SPWRRG
Trigger: ACCCCTTCTCCATGGACTTCACGCCTGAGGAGCGCC...CTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GCCGGGCGCACGGTTCTCACTGAGCCTGCCGGGGAGGTAAGCGCAGCTGGTCCAGCCCGGAACCAGTTCTaGAGGGACTCCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AGRTVLTEPAGEVSAAGPARNQF*RDSFSL
Trigger: GAGGCTGAAGGAGTCCCTGCAGAACTGGTTCCGGGC...TGGACCAGCTGCGCTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCATCCACCGTGGTGGCCTaGATTGCCCAGCATGTCAAT +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPSTVVA*IAQHVN
Trigger: ATTGACATGCTGGGCAATGCAGGCCACCACGGTGGA...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GCGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCTGCAGAGCTCAGTGTaGTCATCCCAAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AGSANTGREGLPAEGPGELQSSV*SSQGSV
Trigger: CACACTGCCTTGGGATGAGCACACTGAGCTCTGCAG...CTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CCTTTACAAGAGCTTTCCTGGAGGGCGTGGCAGCGGCCTGGGAGGAGAGTGGGGCCTCTCGGACCTGCCTaGGAGATCGCGGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PLQELSWRAWQRPGRRVGPLGPA*EIAGPH
Trigger: ATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGG...CCCCACTCTCCTCCCAGGCCGCTGCCACGCCCTCCAGGAAAGCTCTTGTAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCACTCAGGGACACACTTTaGGAGCCACTGGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPLRDTL*EPLVCL
Trigger: CAAACACACCAGTGGCTCTCAAAGTGTGTCCCTGAG...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp AACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCCCCAACCAAGTTTCTaGTTCAGTAACCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: NTGREGLPAEGPGEHRAGPQPSF*FSNPGV
Trigger: TACCCCAGGGTTACTGAATCAGAAACTTGGTTGGGG...CCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGTTGAGTGGTCACCTGTaGTTAGCTCTTCTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRLSGHL*LALLLN
Trigger: GTTTAGGAGAAGAGCTAATCACAGGTGACCACTCAA...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACCCCGGCCACAGGCCATaGACACCAGCCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDPGHRP*TPAGSP
Trigger: GGGGGAACCGGCTGGTGTGCATGGCCTGTGGCCGGG...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACCTTGGGCGGGCAAGCTaGGACACCGGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDLGRAS*DTGPLL
Trigger: GAGGAGGGGGCCGGTGTCCCAGCTTGCCCGCCCAAG...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CCTTTACAAGAGCTTTCCTGGAGGGCGTGGCAGCGGCCTGGGAGGAGAGTGGGGTGGCGCCGGCGGATGTaGCGCTCGATGGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: PLQELSWRAWQRPGRRVGWRRRM*RSMVLI
Trigger: GATGAGCACCATCGAGCGCCACATCCGCCGGCGCCA...CCCCACTCTCCTCCCAGGCCGCTGCCACGCCCTCCAGGAAAGCTCTTGTAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp AGCACAGCTAGTTGGGGTCCTCCCGTCCCCGCCTCTGCCCTCGCTCCTCCTTCCAAAGGGGGATGGGGATaGGGCGGGAATCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: STASWGPPVPASALAPPSKGGWG*GGNRRL
Trigger: CAGCCTTCGATTCCCGCCCCATCCCCATCCCCCTTT...GGAAGGAGGAGCGAGGGCAGAGGCGGGGACGGGAGGACCCCAACTAGCTGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGACACGTGGAGGCCACTaGGGATTCTCGGAAAACGTG +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKTRGGH*GFSENV
Trigger: CACGTTTTCCGAGAATCCTCAGTGGCCTCCACGTGT...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp AGCACAGCTAGTTGGGGTCCTCCCGTCCCCGCCTCTGCCCTCGCTCCTCCTTCCAGATGTCCACTCTCCTaGGGCCTCTCTCTGCCTACG +
Preference number: 4 (lower is better)
Translates to: STASWGPPVPASALAPPSRCPLS*GLSLPT
Trigger: CGTAGGCAGAGAGAGGCCTCAGGAGAGTGGACATCT...GGAAGGAGGAGCGAGGGCAGAGGCGGGGACGGGAGGACCCCAACTAGCTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACCCCGGCCCCAGGCCCTaGGGGTTGAGAACGGACGCC +
Preference number: 4 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHPGPRP*GLRTDA
Trigger: GGCGTCCGTTCTCAACCCGCAGGGCCTGGGGCCGGG...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCAGGAGATTTTCCCACCTaGAACGCAAAGCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPGDFPT*NAKQPV
Trigger: TACAGGCTGCTTTGCGTTGCAGGTGGGAAAATCTCC...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGCCCGGGCCTCACAGTaGTCTGAATATTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EALTPDARVSQPKGRASTARASQ*SEYFLP
Trigger: AGGCAGGAAATATTCAGACCACTGTGAGGCCCGGGC...TGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGCTGCATCAAGATCAATaGAGGGCTCATGAAAACACT +
Preference number: 4 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRLHQDQ*RAHENT
Trigger: AGTGTTTTCATGAGCCCTCCATTGATCTTGATGCAG...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GCGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGGCAACGTCTAACCTGTaGGGCCATAACTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: AGSANTGREGLPAEGPGEATSNL*GHNFHQ
Trigger: TTGATGGAAGTTATGGCCTCACAGGTTAGACGTTGC...CTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp AGCACAGCTAGTTGGGGTCCTCCCGTCCCCGCCTCTGCCCTCGCTCCTCCTTCCCGTGGTGGCCTGCATTaGCCAGCATGTCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: STASWGPPVPASALAPPSRGGLH*PACQSF
Trigger: GAAGGATTGACATGCTGGGCAATGCAGGCCACCACG...GGAAGGAGGAGCGAGGGCAGAGGCGGGGACGGGAGGACCCCAACTAGCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp AGCACAGCTAGTTGGGGTCCTCCCGTCCCCGCCTCTGCCCTCGCTCCTCCTTCCTGCTTTTGGCGGATGTaGCGCTTGATGGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: STASWGPPVPASALAPPSCFWRM*RLMVLS
Trigger: GCTCAGCACCATCAAGCGCCACATCCGCCAAAAGCA...GGAAGGAGGAGCGAGGGCAGAGGCGGGGACGGGAGGACCCCAACTAGCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp AGCACAGCTAGTTGGGGTCCTCCCGTCCCCGCCTCTGCCCTCGCTCCTCCTTCCGGGCTCCCACGGACTTaGTTTAGGGGTAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: STASWGPPVPASALAPPSGLPRT*FRGKQR
Trigger: TCTCTGCTTACCCCTAAACCAAGTCCGTGGGAGCCC...GGAAGGAGGAGCGAGGGCAGAGGCGGGGACGGGAGGACCCCAACTAGCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGCTAACCCCTCTGCCCTaGCTTATCCGAACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKLTPLP*LIRTLA
Trigger: TGCCAAAGTTCGGATAAGCCAGGGCAGAGGGGTTAG...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACACACAGCGCCAGACTTaGGGTCCGCGCCGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHTQRQT*GPRRRH
Trigger: GTGACGGCGGCGCGGACCTCAAGTCTGGCGCTGTGT...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGCGCCGTCCAACTCCATaGGGTACTCCAGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQENESTHPSRTCLGDRGRRPTP*GTPAAS
Trigger: GCTGGCGGCTGGAGTACCTCATGGAGTTGGACGGCG...CCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACGTGCAGGCTGGGCAGTaGCCGGCCACAGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHVQAGQ*PATGHA
Trigger: TGCATGGCCTGTGGCCGGGCACTGCCCAGCCTGCAC...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTGCCGGGAGCCGTGCCTaGCAGCGTGCAAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPAGSRA*QRARLQ
Trigger: CTGCAGCCTTGCACGCTGGCAGGCACGGCTCCCGGC...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCACACCTAGGCAAGAGGGCCAACTCAACTTGCAACGTCTAACCTGTGAGGCCCATCCCTCTCGGACCTaGCTGGGAGATCGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTPRQEGQLNLQRLTCEAHPSRT*LGDRGA
Trigger: GGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATG...GGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGCCACTGGTGTGTTTaGGGCTGTCTCAGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: GSANTGREGLPAEGPGEHSHWCV*GCLSKD
Trigger: ATCTTTACTGAGACAGCCCCAAACACACCAGTGGCT...GTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTCAAAGCAGGAATCAATaGAATCACTACCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPRQPWALRQPPHLWSSAQSRNQ*NHYRSP
Trigger: AGGGCTGCGGTAGTGATTCCATTGATTCCTGCTTTG...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACCCCTACCTGGCTGTGTaGTCATCTCGGTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDPYLAV*SSRFLG
Trigger: GCCCAGGAACCGAGATGATCACACAGCCAGGTAGGG...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp TGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGCGGCTGCCACGGGGGGGGACTTTAAAAAGTaGCTAATAGTTGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: WEIAGPHPCHTGPAAATGGDFKK*LIVGTR
Trigger: ACGAGTACCAACTATTAGTCACTTTTTAAAGTCCCC...CCCCGTGGCAGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCA
61% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCATTGGTTCCCCCAATTTaGCTACTGTTTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPLVPPI*LLFLNG
Trigger: CCCATTCAAAAACAGTAGGCAAATTGGGGGAACCAA...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ATCCACCGTGGTGGCCTGCATTGCCCAGCATGTCAATCCTTCGGCAGGCCTGACGCCTCCAGGATAGTCTaGCGCTCCTCAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: IHRGGLHCPACQSFGRPDASRIV*RSSGVK
Trigger: CTTCACGCCTGAGGAGCGCCAGACTATCCTGGAGGC...GTCAGGCCTGCCGAAGGATTGACATGCTGGGCAATGCAGGCCACCACGGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACCTTTGCCTGGGCCCTTaGGCGGGCAAGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHLCLGP*AGKLGH
Trigger: GTGTCCCAGCTTGCCCGCCCAAGGGCCCAGGCAAAG...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp TTTGATAGGTCATGTCCGCACTCTGGGCCTGAGCTTCTTTGTCTGCAACGACACCTGCTCCGGCTCCGGTaGTCCCCGCCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: FDRSCPHSGPELLCLQRHLLRLR*SPPGSM
Trigger: CATGGAGCCCGGCGGGGACCACCGGAGCCGGAGCAG...GTGTCGTTGCAGACAAAGAAGCTCAGGCCCAGAGTGCGGACATGACCTATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS-3UTR CCA 90 bp GGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACATCTTCCTGAATCCCTaGTGGCCTCCACAACAAAAA +
Preference number: 4 (lower is better)
Translates to: GSANTGREGLPAEGPGEHIFLNP*WPPQQK
Trigger: TTTTTGTTGTGGAGGCCACCAGGGATTCAGGAAGAT...GTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGCTGTCTCAAAAACCGTaGAGGTTCAAACTCACTGGG +
Preference number: 4 (lower is better)
Translates to: GRWESALPAAHRLAQGPKLSQKP*RFKLTG
Trigger: CCCAGTGAGTTTGAACCTCCACGGTTTTTGAGACAG...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp TGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGGCCTGCGGCTGCCACGGGGTTGAAAGAACTTGAGTaGTCACCTGTGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: WEIAGPHPCHTGPAAATGLKELE*SPVISS
Trigger: AGAGCTAATCACAGGTGACCACTCAAGTTCTTTCAA...CCCCGTGGCAGCCGCAGGCCCTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GGCACACCTAGGCAAGAGGGCCAACTCAACTTGCAACGTCTAACCTGTGAGGCCGCGGGTCATAGTCCATaGGACACTCGGCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: GTPRQEGQLNLQRLTCEAAGHSP*DTRPGT
Trigger: GGTTCCGGGCCGAGTGTCTCATGGACTATGACCCGC...GGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp AACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGTACTTTTCAGTCAATTaGCAACCCATTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: NTGREGLPAEGPGEHRAGYFSVN*QPIQDL
Trigger: AAGATCCTGAATGGGTTGTCAATTGACTGAAAAGTA...CCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTTCCCGTCCCCGCCTCTaGCCTCGCTCCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPSRPRL*PRSSFL
Trigger: AAGGAAGGAGGAGCGAGGGCAGAGGCGGGGACGGGA...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp CGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAAATTTTAATAACTaGCCAGCGAATTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: REALTPDARVSQPKGRASTNFNN*PANWEA
Trigger: TGCTTCCCAATTCGCTGGTCAGTTATTAAAATTTGT...GCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTATGGCGCCTTCCAGCTaGGGCCCTGCAGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPMAPSS*GPAELS
Trigger: ACTGAGCTCTGCAGGGCCTCAGCTGGAAGGCGCCAT...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACACTTTGGCAGTGGGCTTaGGTGATTATAAATTGGTTC +
Preference number: 4 (lower is better)
Translates to: EALTPDARVSQPKGRASTLWQWA*VIINWF
Trigger: GAACCAATTTATAATCACTCAAGCCCACTGCCAAAG...TGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CCTTTGATAGGTCATGTCCGCACTCTGGGCCTGAGCTTCTTTGTCTGCAACGACGCCTTCGTCTTCCTCTaGCTCCGCGCTGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: PLIGHVRTLGLSFFVCNDAFVFL*LRAAAR
Trigger: TCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGC...GTCGTTGCAGACAAAGAAGCTCAGGCCCAGAGTGCGGACATGACCTATCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS-3UTR CCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTGCGGACAAAGGGGGATaGGGATGGGGCGGGAATCGA +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPADKGG*GWGGNR
Trigger: TCGATTCCCGCCCCATCCCCATCCCCCTTTGTCCGC...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACGCACATAAGGGTGACTaGGTCAGCTCTGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHAHKGD*VSSVPA
Trigger: GGCGGGGACAGAGCTGACCCAGTCACCCTTATGTGC...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACGGAAGGACGATTGGATaGCGCCTTCCAGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHGRTIG*RLPAEA
Trigger: GGCCTCAGCTGGAAGGCGCCATCCAATCGTCCTTCC...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGCCTCTGGAGTTCTGCTaGGGAGGGGAAGGACGATTG +
Preference number: 4 (lower is better)
Translates to: PQENESTHPSRTCLGDRGPLEFC*GGEGRL
Trigger: CAATCGTCCTTCCCCTCCCCAGCAGAACTCCAGAGG...CCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACTTTTCAGTCAATTGACAACCCATTCAGGATCTTCCTGAATCCCTGGTGGCCTTCCACTCCCGGGCGATaGGGGCCTGGACAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TFQSIDNPFRIFLNPWWPSTPGR*GPGQAR
Trigger: GCGGGCCTGTCCAGGCCCTCATCGCCCGGGAGTGGA...AGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTCCCCAGCCCCAGGTGTaGATCCCAGCTGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPPQPQV*IPAVAD
Trigger: ATCAGCAACAGCTGGGATGCACACCTGGGGCTGGGG...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTATGCACACCATGCCGTaGCGGGCAGGGTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPMHTMP*RAGLKS
Trigger: GGACTTCAACCCTGCCCGGCACGGCATGGTGTGCAT...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp GCCGGGCGCACGGTTCTCACTGAGCCTGCCGGGGAGGTAAGCGCAGCTGGTCCAAGTAACCCTGGGGTATaGCCCAAGAATTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: AGRTVLTEPAGEVSAAGPSNPGV*PKNFYF
Trigger: GAAATAAAAATTCTTGGGCCATACCCCAGGGTTACT...TGGACCAGCTGCGCTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGGTCTGAATATTTCCTaGCTGAAGATGCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PQENESTHPSRTCLGDRGGLNIS*LKMLVP
Trigger: GGGGACCAGCATCTTCAGGCAGGAAATATTCAGACC...CCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTCAGTGTGCAGGGCTTTaGCACCTTCAGGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPQCAGL*HLQESQ
Trigger: CTGTGACTCCTGAAGGTGGCAAAGCCCTGCACACTG...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGAAACTAAGGCTGCTGTaGCCCTTAAGCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PQENESTHPSRTCLGDRGKLRLL*PLSWLL
Trigger: TAAAAGCCAGCTTAAGGGTCACAGCAGCCTTAGTTT...CCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp AGTAGATCCATAGAATCCACTGGCTTCGGAGTCATAGGCCTGGGTTCAAGTCCTTCCGCACTCTGGGCCTaGGCTTCTTTGTCTGCAACG +
Preference number: 4 (lower is better)
Translates to: SRSIESTGFGVIGLGSSPSALWA*ASLSAT
Trigger: CGTTGCAGACAAAGAAGCTCAGGCCCAGAGTGCGGA...AGGACTTGAACCCAGGCCTATGACTCCGAAGCCAGTGGATTCTATGGATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS-3UTR CCA 90 bp ACTTTTCAGTCAATTGACAACCCATTCAGGATCTTCCTGAATCCCTGGTGGCCTTGCACCTCCAGCACGTaGGCACGGATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFQSIDNPFRIFLNPWWPCTSST*ARMSSR
Trigger: CCTGGACGACATCCGTGCCCACGTGCTGGAGGTGCA...AGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CCTTTGATAGGTCATGTCCGCACTCTGGGCCTGAGCTTCTTTGTCTGCAACGACCACTGGCTAGCTGGCTaGTCTCTAAGCATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLIGHVRTLGLSFFVCNDHWLAG*SLSILP
Trigger: TGGAAGGATGCTTAGAGACCAGCCAGCTAGCCAGTG...GTCGTTGCAGACAAAGAAGCTCAGGCCCAGAGTGCGGACATGACCTATCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
3UTR CAA 72 bp CAAGGAGGCACACCTAGGCAAGAGGGCCAACTCAACTaGCAACGTCTAACCTGTGAGGCCATAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: QGGTPRQEGQLN*QRLTCEAITSI
Trigger: GATGGAAGTTATGGCCTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTCTTGCCTAGGTGTGCCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp GCCATCCATAATCTCCGTTCTCAAGCTTTTAATACTGTCTCAAAAACCGTGGAGGCGCACGGTTCTCACTaGGCCTGCCGGGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: AIHNLRSQAFNTVSKTVEAHGSH*ACRGGK
Trigger: CTTACCTCCCCGGCAGGCTCAGTGAGAACCGTGCGC...CTCCACGGTTTTTGAGACAGTATTAAAAGCTTGAGAACGGAGATTATGGATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR GCA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCAAAGCACAAAGCCCCCTaGCGAGGCAGCCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPKHKAP*RGSLGP
Trigger: GGGCCCAAGGCTGCCTCGGCAGGGGGCTTTGTGCTT...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCATTTCCGGTCAGGTCCTaGGGGGCGAGGTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPFPVRS*GARSSP
Trigger: AGGCGATGACCTCGCCCCCCAGGACCTGACCGGAAA...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACTTTTCAGTCAATTGACAACCCATTCAGGATCTTCCTGAATCCCTGGTGGCCTCTCGGCGCTAACACGTaGAGGCCACTGAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: TFQSIDNPFRIFLNPWWPLGANT*RPLRIL
Trigger: GAGAATCCTCAGTGGCCTCCACGTGTTAGCGCCGAG...AGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACTTTTCAGTCAATTGACAACCCATTCAGGATCTTCCTGAATCCCTGGTGGCCTTTACAAGAGCTTTCCTaGAGGGCGTGGCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: TFQSIDNPFRIFLNPWWPLQELS*RAWQRP
Trigger: AGGCCGCTGCCACGCCCTCCAGGAAAGCTCTTGTAA...AGGCCACCAGGGATTCAGGAAGATCCTGAATGGGTTGTCAATTGACTGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CAA 72 bp GGGAATCTAACCCCTCTGCCCTGGCTTATCCGAACTTaGGCAGTGGGCTTGAGTGATTATAAATTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GNLTPLPWLIRT*AVGLSDYKLVP
Trigger: GGGAACCAATTTATAATCACTCAAGCCCACTGCCAAAGTTCGGATAAGCCAGGGCAGAGGGGTTAGATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp CCACAGGAGAATGAATCTACACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGAATCACCGTGGAAAATaGGAACTAAATACATCATCA +
Preference number: 4 (lower is better)
Translates to: PQENESTHPSRTCLGDRGNHRGK*ELNTSS
Trigger: TGATGATGTATTTAGTTCCCATTTTCCACGGTGATT...CCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGTGTAGATTCATTCTCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CAA 72 bp CCTCTGCCCTGGCTTATCCGAACTTTGGCAGTGGGCTaGAGTGATTATAAATTGGTTCCCCCAATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PLPWLIRTLAVG*SDYKLVPPICL
Trigger: TAGGCAAATTGGGGGAACCAATTTATAATCACTCAAGCCCACTGCCAAAGTTCGGATAAGCCAGGGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CCA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCAGTTCCTGCAGCAGCCTaGCTTTGTGAAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPVPAAA*LCEEQT
Trigger: TGTCTGCTCTTCACAAAGCCAGGCTGCTGCAGGAAC...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
3UTR CAA 72 bp ATCCGAACTTTGGCAGTGGGCTTGAGTGATTATAAATaGGTTCCCCCAATTTGCCTACTGTTTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: IRTLAVGLSDYK*VPPICLLFLNG
Trigger: CCCATTCAAAAACAGTAGGCAAATTGGGGGAACCAATTTATAATCACTCAAGCCCACTGCCAAAGTTCGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR TCA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCAATCCTTCGGCAGGCCTaGCAAATTTTAATAACTGAC +
Preference number: 4 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPILRQA*QILITD
Trigger: GTCAGTTATTAAAATTTGTCAGGCCTGCCGAAGGAT...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CCA 90 bp AGCAGGTGGGCGGCCTTCTCGCTCCACTCCCGGGCGATGAGGGCCTaGACAGGCCCGCCGAGGCGCGTGGAGCCCGGGTGGCGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SRWAAFSLHSRAMRA*TGPPRRVEPGWRRR
Trigger: CCGCCGGCGCCACCCGGGCTCCACGCGCCTCGGCGGGCCTGTCCAGGCCCTCATCGCCCGGGAGTGGAGCGAGAAGGCCGCCCACCTGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCACGTCGCCTGGGCCCTaGGGCGGGCAAGCTGGGACA +
Preference number: 5 (lower is better)
Translates to: TPDARVSQPKGRASTGRGTSPGP*GGQAGT
Trigger: TGTCCCAGCTTGCCCGCCCAAGGGCCCAGGCGACGT...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338498.6
CDS GCA 90 bp CGCTGGATCCAGGCTAGTCGCCTTCGTCTTCCTCTGGCTCCGCGCTaGCGCTCGATCCGGCGGGCGGCAGCCGTCGGCCCCGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RWIQASRLRLPLAPR*RSIRRAAAVGPVPR
Trigger: CCTCGGCACGGGGCCGACGGCTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGACTAGCCTGGATCCAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS-3UTR CAA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCCACACAGCGCCAGACTaGAGGTCCGCGCCGCCGTCA +
Preference number: 5 (lower is better)
Translates to: TPDARVSQPKGRASTGRGHTAPD*RSAPPS
Trigger: TGACGGCGGCGCGGACCTCAAGTCTGGCGCTGTGTG...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS GCA 90 bp CCAGCTGAAGATCTTGCCCGCCTTCGTCTTCCTCTGGCTCCGCGCTaGCGCTCGATCCGGCGGGCGGCAGCCGTCGGCCCCGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PAEDLARLRLPLAPR*RSIRRAAAVGPVPR
Trigger: CCTCGGCACGGGGCCGACGGCTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGGGCAAGATCTTCAGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp AAGCCCCCTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGGCTTTGCCTGGGCCCTaGGGCGGGCAAGCTGGGACA +
Preference number: 5 (lower is better)
Translates to: KPPAEAALGPAAAAPPLEALPGP*GGQAGT
Trigger: TGTCCCAGCTTGCCCGCCCAAGGGCCCAGGCAAAGC...CTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAGGGGGCTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp GCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCCCAGGCCCTGCGGGTaGAGAACGGACGCCGCATCC +
Preference number: 5 (lower is better)
Translates to: ALTPDARVSQPKGRASTGPRPCG*RTDAAS
Trigger: GGATGCGGCGTCCGTTCTCAACCCGCAGGGCCTGGG...CCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS GCA 90 bp CTCCAGCACGTGGGCACGGATGTCGTCCAGGTGCAGGCTGGGCAGTaGCCGGCCACAGGCCATGCACACCAGCCGGTTCCCCCGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LQHVGTDVVQVQAGQ*PATGHAHQPVPPRV
Trigger: GACCCGCGGGGGAACCGGCTGGTGTGCATGGCCTGTGGCCGGGCACTGCCCAGCCTGCACCTGGACGACATCCGTGCCCACGTGCTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CGGGAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCCACACAGCGCCAGACTaGAGGTCCGCGCCGCCGTCA +
Preference number: 5 (lower is better)
Translates to: REALTPDARVSQPKGRASHTAPD*RSAPPS
Trigger: TGACGGCGGCGCGGACCTCAAGTCTGGCGCTGTGTG...GCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS-3UTR CAA 90 bp GGCCGATGGGAGAGTGCGCTTCCCGCAGCGCACCGACTGGCTCAGGGACCCAAGCCACCAGCTGGGGCTTaGCCTGGGCCCTTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GRWESALPAAHRLAQGPKPPAGA*PGPLGG
Trigger: CCCGCCCAAGGGCCCAGGCAAAGCCCCAGCTGGTGG...CTTGGGTCCCTGAGCCAGTCGGTGCGCTGCGGGAAGCGCACTCTCCCATCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp ACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCCCGTGCCGGGCAGGGTaGAAGTCCATCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: TPDARVSQPKGRASTGRGPCRAG*KSIRYS
Trigger: GGAGTACCTGATGGACTTCAACCCTGCCCGGCACGG...GCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CCA 90 bp CATCCTTCCAGCGCTGGATCCAGGCTAGTCGCCTTCGTCTTCCTCTaGCTCCGCGCTGCCGCTCGATCCGGCGGGCGGCAGCCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: HPSSAGSRLVAFVFL*LRAAARSGGRQPSA
Trigger: GGCCGACGGCTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGACTAGCCTGGATCCAGCGCTGGAAGGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS-3UTR CAA 90 bp AACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGGGAGGGGAAGGACGATaGGATGGCGCCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: NTGREGLPAEGPGEHRAGGGEGR*DGAFQL
Trigger: CAGCTGGAAGGCGCCATCCAATCGTCCTTCCCCTCC...CCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS GCA 90 bp GCCGCCAGTGGTCGTGGTAGTAGCGCCGGTGGTCACGGCCAGGGATaGGGCTCTTTCCAGGCCTCGAGGCCCGGGCCTCACAGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: AASGRGSSAGGHGQG*GSFQASRPGPHSGL
Trigger: CAGACCACTGTGAGGCCCGGGCCTCGAGGCCTGGAAAGAGCCGCATCCCTGGCCGTGACCACCGGCGCTACTACCACGACCACTGGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CGGTCCAACGCGCCTTCCCACCCCGGGAAGGCTCCCGAGCCCTGCGGCCCAGCCGGAGTAGGGGTGCTTTaGGCGGATGTGGCGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RSNAPSHPGKAPEPCGPAGVGVL*ADVALD
Trigger: ATCAAGCGCCACATCCGCCAAAAGCACCCCTACTCC...GGCTGGGCCGCAGGGCTCGGGAGCCTTCCCGGGGTGGGAAGGCGCGTTGGACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTCTGGGCCTGAGGCACTaGAACCTTAGGCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LPRQPWALRQPPHLWSSALGLRH*NLRLWP
Trigger: AGGCCAGAGCCTAAGGTTCAAGTGCCTCAGGCCCAG...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp ACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGGGCGGTCTCAGGGACACACTTaGAGAGCCACTGGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: TGREGLPAEGPGEHRAGRSQGHT*RATGVF
Trigger: AAACACACCAGTGGCTCTCAAAGTGTGTCCCTGAGA...CCGCCCCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAGGGCGGTGTGCATCCCAGCTGTaGCTGATGACTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LTPDARVSQPKGRASTGRCASQL*LMTSFS
Trigger: GGAGAAGGAAGTCATCAGCAACAGCTGGGATGCACA...CCGCCCTGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS TCA 90 bp CACAGGCCATGCACACCAGCCGGTTCCCCCGCGGGTCATAGTCCATaGGACACTCGGCCCGGAACCAGTTCTGCAGGGACTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HRPCTPAGSPAGHSP*DTRPGTSSAGTPSA
Trigger: GGCTGAAGGAGTCCCTGCAGAACTGGTTCCGGGCCGAGTGTCTCATGGACTATGACCCGCGGGGGAACCGGCTGGTGTGCATGGCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CCA 90 bp CCAGGGATGCGGCTCTTTCCAGGCCTCGAGGCCCGGGCCTCACAGTaGTCTGAATATTTCCTGCCTGAAGATGCTGGTCCCCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PGMRLFPGLEARASQ*SEYFLPEDAGPLAL
Trigger: CAGGGCCAGGGGACCAGCATCTTCAGGCAGGAAATATTCAGACCACTGTGAGGCCCGGGCCTCGAGGCCTGGAAAGAGCCGCATCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CTGCCGAGGCAGCCTTGGGCCCTGCGGCAGCCGCCCCACCTCTGGAGTTCTGCTTGGCTTATCCGAACTTaGGCAGTGGGCTTGAGTGAT +
Preference number: 5 (lower is better)
Translates to: LPRQPWALRQPPHLWSSAWLIRT*AVGLSD
Trigger: ATCACTCAAGCCCACTGCCAAAGTTCGGATAAGCCA...AGCAGAACTCCAGAGGTGGGGCGGCTGCCGCAGGGCCCAAGGCTGCCTCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CCTTTACAAGAGCTTTCCTGGAGGGCGTGGCAGCGGCCTGGGAGGAGAGTGGGGCCGTGGTGGCCTGCATaGCCCAGCATGTCAATCCTT +
Preference number: 5 (lower is better)
Translates to: PLQELSWRAWQRPGRRVGPWWPA*PSMSIL
Trigger: AAGGATTGACATGCTGGGCAATGCAGGCCACCACGG...CCCCACTCTCCTCCCAGGCCGCTGCCACGCCCTCCAGGAAAGCTCTTGTAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp ACATCCCTCTCGGACCTGCCTGGGAGATCGCGGGGCCCCATCCCTGCCACACAGGAGGGCCAACTCAACTaGCAACGTCTAACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: TSLSDLPGRSRGPIPATQEGQLN*QRLTCE
Trigger: CTCACAGGTTAGACGTTGCAAGTTGAGTTGGCCCTC...CTGTGTGGCAGGGATGGGGCCCCGCGATCTCCCAGGCAGGTCCGAGAGGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp CGCACCGACTGGCTCAGGGACCCAAGTGGCACCGCGCAGACGCCGGTGGCCCCATTACTTTTCAGTCAATaGACAACCCATTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: RTDWLRDPSGTAQTPVAPLLFSQ*TTHSGS
Trigger: AGATCCTGAATGGGTTGTCAATTGACTGAAAAGTAA...TGGGGCCACCGGCGTCTGCGCGGTGCCACTTGGGTCCCTGAGCCAGTCGGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp GAAGCGCTAACACCGGACGCGAGGGTCTCCCAGCCGAAGGGCCGGGCGAGCACAATTGGTTCCCCCAATTaGCCTACTGTTTTTGAATGG +
Preference number: 5 (lower is better)
Translates to: EALTPDARVSQPKGRASTIGSPN*PTVFEW
Trigger: CCATTCAAAAACAGTAGGCAAATTGGGGGAACCAAT...TGTGCTCGCCCGGCCCTTCGGCTGGGAGACCCTCGCGTCCGGTGTTAGCGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp TCAGTGTGCTCATCCCAAGGCAGTGTGCAGGGCTTTGCCACCTTCAGGAGTCACACTTTGGCAGTGGGCTaGAGTGATTATAAATTGGTT +
Preference number: 5 (lower is better)
Translates to: SVCSSQGSVQGFATFRSHTLAVG*SDYKLV
Trigger: AACCAATTTATAATCACTCAAGCCCACTGCCAAAGT...GTGACTCCTGAAGGTGGCAAAGCCCTGCACACTGCCTTGGGATGAGCACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp GGCCTGATCTCGGGGCCACCTGTTCTCCACAGGAGAATGAATCTACACATCCCTATCATCAGGTCTTCATaGAAAGAACTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: GLISGPPVLHRRMNLHIPIIRSS*KELEWS
Trigger: TGACCACTCAAGTTCTTTCAATGAAGACCTGATGAT...AGGGATGTGTAGATTCATTCTCCTGTGGAGAACAGGTGGCCCCGAGATCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS-3UTR CAA 90 bp ACCGTGGAGGTTCAAACTCACTGGGAATTTACTTTTCAGTCAATTGACAACCCATTGAGTGATTATAAATaGGTTCCCCCAATTTGCCTA +
Preference number: 5 (lower is better)
Translates to: TVEVQTHWEFTFQSIDNPLSDYK*VPPICL
Trigger: TAGGCAAATTGGGGGAACCAATTTATAATCACTCAA...TGGGTTGTCAATTGACTGAAAAGTAAATTCCCAGTGAGTTTGAACCTCCACGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CCA 72 bp GCGGCCTTCTCGCTCCACTCCCGGGCGATGAGGGCCTaGACAGGCCCGCCGAGGCGCGTGGAGCCCGGGTGG +
Preference number: 6 (lower is better)
Translates to: AAFSLHSRAMRA*TGPPRRVEPGW
Trigger: CCACCCGGGCTCCACGCGCCTCGGCGGGCCTGTCCAGGCCCTCATCGCCCGGGAGTGGAGCGAGAAGGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CAA 72 bp CCGCTAGGCCGCTACGCCCGACACACAGCGCCAGACTaGAGGTCCGCGCCGCCGTCACGCGGCGCCGGGGCG +
Preference number: 6 (lower is better)
Translates to: PLGRYARHTAPD*RSAPPSRGAGA
Trigger: CGCCCCGGCGCCGCGTGACGGCGGCGCGGACCTCAAGTCTGGCGCTGTGTGTCGGGCGTAGCGGCCTAGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338498.6
ENST00000433688.2
CDS TCA 72 bp GCAGGTGGGCGGCCTTCTCGCTCCACTCCCGGGCGATaGGGGCCTGGACAGGCCCGCCGAGGCGCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: AGGRPSRSTPGR*GPGQARRGAWS
Trigger: GCTCCACGCGCCTCGGCGGGCCTGTCCAGGCCCTCATCGCCCGGGAGTGGAGCGAGAAGGCCGCCCACCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS GCA 72 bp GATCTTGCCCGCCTTCGTCTTCCTCTGGCTCCGCGCTaGCGCTCGATCCGGCGGGCGGCAGCCGTCGGCCCC +
Preference number: 6 (lower is better)
Translates to: DLARLRLPLAPR*RSIRRAAAVGP
Trigger: GGGGCCGACGGCTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGGGCAAGATC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS GCA 72 bp CAGGCTAGTCGCCTTCGTCTTCCTCTGGCTCCGCGCTaGCGCTCGATCCGGCGGGCGGCAGCCGTCGGCCCC +
Preference number: 6 (lower is better)
Translates to: QASRLRLPLAPR*RSIRRAAAVGP
Trigger: GGGGCCGACGGCTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGACTAGCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS CCA 72 bp GCGGAGGCCGAGTCCCGGCTCTTTCCGGTCAGGTCCTaGGGGGCGAGGTCATCGCCTGGTGGGGACTGGGTG +
Preference number: 6 (lower is better)
Translates to: AEAESRLFPVRS*GARSSPGGDWV
Trigger: CACCCAGTCCCCACCAGGCGATGACCTCGCCCCCCAGGACCTGACCGGAAAGAGCCGGGACTCGGCCTCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433688.2
ENST00000445014.3
CDS GCA 72 bp GGTCGTGGTAGTAGCGCCGGTGGTCACGGCCAGGGATaGGGCTCTTTCCAGGCCTCGAGGCCCGGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: GRGSSAGGHGQG*GSFQASRPGPH
Trigger: GTGAGGCCCGGGCCTCGAGGCCTGGAAAGAGCCGCATCCCTGGCCGTGACCACCGGCGCTACTACCACGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CCA 72 bp AGCGCTGGATCCAGGCTAGTCGCCTTCGTCTTCCTCTaGCTCCGCGCTGCCGCTCGATCCGGCGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SAGSRLVAFVFL*LRAAARSGGRQ
Trigger: CTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGACTAGCCTGGATCCAGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546282.3
CDS CCA 72 bp TTCCAGCTGAAGATCTTGCCCGCCTTCGTCTTCCTCTaGCTCCGCGCTGCCGCTCGATCCGGCGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: FQLKILPAFVFL*LRAAARSGGRQ
Trigger: CTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGGGCAAGATCTTCAGCTGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS TCA 72 bp CCCAGGCCAGCCGGTTCCCCCGCGGGTCATAGTCCATaGGACACTCGGCCCGGAACCAGTTCTGCAGGGACT +
Preference number: 6 (lower is better)
Translates to: PRPAGSPAGHSP*DTRPGTSSAGT
Trigger: AGTCCCTGCAGAACTGGTTCCGGGCCGAGTGTCTCATGGACTATGACCCGCGGGGGAACCGGCTGGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445014.3
CDS TCA 72 bp TGCACACCAGCCGGTTCCCCCGCGGGTCATAGTCCATaGGACACTCGGCCCGGAACCAGTTCTGCAGGGACT +
Preference number: 6 (lower is better)
Translates to: CTPAGSPAGHSP*DTRPGTSSAGT
Trigger: AGTCCCTGCAGAACTGGTTCCGGGCCGAGTGTCTCATGGACTATGACCCGCGGGGGAACCGGCTGGTGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS GCA 72 bp TCGAGGCCCGGGCCTCACAGTGGTCTGAATATTTCCTaGCTGAAGATGCTGGTCCCCTGGCCCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SRPGPHSGLNIS*LKMLVPWPWRR
Trigger: CCTCCTCCAGGGCCAGGGGACCAGCATCTTCAGGCAGGAAATATTCAGACCACTGTGAGGCCCGGGCCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433688.2
CDS CCA 72 bp CGGCTCTTTCCAGGCCTCGAGGCCCGGGCCTCACAGTaGTCTGAATATTTCCTGCCTGAAGATGCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: RLFPGLEARASQ*SEYFLPEDAGP
Trigger: GGGACCAGCATCTTCAGGCAGGAAATATTCAGACCACTGTGAGGCCCGGGCCTCGAGGCCTGGAAAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433688.2