Pregenerated sensors for C11ORF72 (Homo sapiens)
Ensembl gene IDs: ENSG00000184224Ensembl transcript IDs: ENST00000333139.3, ENST00000446232.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGGGCCAGTGGGACAGGGAGGAGCCCTTGATACCTCTTGGCTTGTaGCCTGGAGGCTGGCTGGGGAGGCTGATATACAGAGTGACACAG | + |
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Preference number: 5 (lower is better) Translates to: WGQWDREEPLIPLGL*PGGWLGRLIYRVTQ Trigger: CTGTGTCACTCTGTATATCAGCCTCCCCAGCCAGCCTCCAGGCCACAAGCCAAGAGGTATCAAGGGCTCCTCCCTGTCCCACTGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 90 bp | CCAGTGGGACAGGGAGGAGCCCTTGATACCTCTTGGCTTGTGGCCTaGAGGCTGGCTGGGGAGGCTGATATACAGAGTGACACAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: PVGQGGALDTSWLVA*RLAGEADIQSDTGW Trigger: CCATCCTGTGTCACTCTGTATATCAGCCTCCCCAGCCAGCCTCCAGGCCACAAGCCAAGAGGTATCAAGGGCTCCTCCCTGTCCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 90 bp | CCTCCAGGACCCAGCAGAAGGCGACATGCGAGGTTTGTTTACTTGTaGCATCAAAGGCTGGGAGCCGGCGAGCTAAGGAGGGAGCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PPGPSRRRHARFVYL*HQRLGAGELRRERK Trigger: CTTTCGCTCCCTCCTTAGCTCGCCGGCTCCCAGCCTTTGATGCCACAAGTAAACAAACCTCGCATGTCGCCTTCTGCTGGGTCCTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CCA 90 bp | GACAGGGAGGAGCCCTTGATACCTCTTGGCTTGTGGCCTGGAGGCTaGCTGGGGAGGCTGATATACAGAGTGACACAGGATGGGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: DREEPLIPLGLWPGG*LGRLIYRVTQDGMG Trigger: ACCCATCCCATCCTGTGTCACTCTGTATATCAGCCTCCCCAGCCAGCCTCCAGGCCACAAGCCAAGAGGTATCAAGGGCTCCTCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 90 bp | CTCCTTCTTCGCTTGAGAAGCCTGGCAAGTAGGTGCTCCAGTGGGTaGGGACCAGTGGGGGATTTGTTGTTAGGAGACCTCAGGCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: LLLRLRSLASRCSSG*GPVGDLLLGDLRPS Trigger: ACTCGGCCTGAGGTCTCCTAACAACAAATCCCCCACTGGTCCCCACCCACTGGAGCACCTACTTGCCAGGCTTCTCAAGCGAAGAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 90 bp | CAAGTTGGGAGGAAGACAGATCCTCTGGTGCAGATCCAGCTTGTATaGGCAAAGCCAAAGGAGCTGGAACTGGGGAGGTTGACAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: QVGRKTDPLVQIQLV*AKPKELELGRLTGG Trigger: GCCACCTGTCAACCTCCCCAGTTCCAGCTCCTTTGGCTTTGCCCATACAAGCTGGATCTGCACCAGAGGATCTGTCTTCCTCCCAACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS GCA 90 bp | ATCAGAGTGGATCTCCTTCTTCGCTTGAGAAGCCTGGCAAGTAGGTaGTCCAGTGGGTGGGGACCAGTGGGGGATTTGTTGTTAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: IRVDLLLRLRSLASR*SSGWGPVGDLLLGD Trigger: GTCTCCTAACAACAAATCCCCCACTGGTCCCCACCCACTGGAGCACCTACTTGCCAGGCTTCTCAAGCGAAGAAGGAGATCCACTCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 90 bp | CTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTaGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LPTRPYFRLSHGEKP*TIPGFPRQRSLRPS Trigger: GGAAGGCCGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTGAAATATGGCCTCGTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 90 bp | AGATGTGAGGGTGGGAGGCCCCAAGGATACATTGTTAATTTCAGGTaGGAGATGACAGGGCCACAGCCATCTATCACTGTGCAGGGAATG | + |
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Preference number: 5 (lower is better) Translates to: RCEGGRPQGYIVNFR*EMTGPQPSITVQGM Trigger: CATTCCCTGCACAGTGATAGATGGCTGTGGCCCTGTCATCTCTCACCTGAAATTAACAATGTATCCTTGGGGCCTCCCACCCTCACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS TCA 90 bp | GCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTaGTCATCTGTGGGTGTTTCTCGAAGAGGGGGATGTGTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AYGGSRQPLSSLSIY*SSVGVSRRGGCVRV Trigger: GACCCTGACACATCCCCCTCTTCGAGAAACACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 90 bp | ACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTaGGTTCCCTTAGTATTTATTGATCATCTGTGGGTGTTTCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: TRGTSVQHMEDPASL*VPLVFIDHLWVFLE Trigger: TTCGAGAAACACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGCTGAACGCTGGTTCCCCGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 90 bp | AGGGTGGGAGGCCCCAAGGATACATTGTTAATTTCAGGTGAGAGATaGCAGGGCCACAGCCATCTATCACTGTGCAGGGAATGTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RVGGPKDTLLISGER*QGHSHLSLCRECLE Trigger: TTCCAAACATTCCCTGCACAGTGATAGATGGCTGTGGCCCTGTCATCTCTCACCTGAAATTAACAATGTATCCTTGGGGCCTCCCACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS TCA 90 bp | AACAAAGCACATCTTGCACCGCCCTTAATCCATTCAACTCTGAGTTaGCACAGCACATGTTTCAGAGAGCACGGGGTTGGGGGTAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: NKAHLAPPLIHSTLS*HSTCFREHGVGGKV Trigger: GACCTTACCCCCAACCCCGTGCTCTCTGAAACATGTGCTGTGTCAACTCAGAGTTGAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS GCA 90 bp | TTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATaGCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: FIPRHSIAQGQAGDR*LPLVSTARGIPSSF Trigger: AAAAGAGGAAGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS GCA 90 bp | AGGAGATTGTGGAGGGCAAGGGGCTGGAAATTTGGGATTGTTGATTaGCTAAGCAAGGGGCATGAAATAATTGGGATTGGAAACCGCATT | + |
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Preference number: 5 (lower is better) Translates to: RRLWRARGWKFGIVD*LSKGHEIIGIGNRI Trigger: AATGCGGTTTCCAATCCCAATTATTTCATGCCCCTTGCTTAGGCAATCAACAATCCCAAATTTCCAGCCCCTTGCCCTCCACAATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 90 bp | AGACCTCCAGGACCCAGCAGAAGGCGACATGCGAGGTTTGTTTACTaGTGGCATCAAAGGCTGGGAGCCGGCGAGCTAAGGAGGGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: RPPGPSRRRHARFVY*WHQRLGAGELRRER Trigger: TCGCTCCCTCCTTAGCTCGCCGGCTCCCAGCCTTTGATGCCACAAGTAAACAAACCTCGCATGTCGCCTTCTGCTGGGTCCTGGAGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 90 bp | GGGGGAGGTGACGTCCAAAGGGCTCCTAGGAGGACTAGGGCCAAGTaGGGAGGAAGACAGATCCTCTGGTGCAGATCCAGCTTGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: GGGDVQRAPRRTRAK*GGRQILWCRSSLYG Trigger: CCCATACAAGCTGGATCTGCACCAGAGGATCTGTCTTCCTCCCAACTTGGCCCTAGTCCTCCTAGGAGCCCTTTGGACGTCACCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 72 bp | GAGACCTCAGGCCGAGTTCTGGCAGTTGTGTCATCCTaGGCAGGCCACTCAGCAATGCTGATACCCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: ETSGRVLAVVSS*AGHSAMLIPCM Trigger: CATGCAGGGTATCAGCATTGCTGAGTGGCCTGCCCAGGATGACACAACTGCCAGAACTCGGCCTGAGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CCA 72 bp | GAGACCTCAGGCCGAGTTCTGGCAGTTGTGTCATCCTaGGCAGGCCACTCAGCAATGCTGATACCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ETSGRVLAVVSS*AGHSAMLIPCF Trigger: GAAGCAGGGTATCAGCATTGCTGAGTGGCCTGCCCAGGATGACACAACTGCCAGAACTCGGCCTGAGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446232.1 |
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| CDS CAA 72 bp | GGACCCAGCAGAAGGCGACATGCGAGGTTTGTTTACTaGTGGCATCAAAGGCTGGGAGCCGGCGAGCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPSRRRHARFVY*WHQRLGAGELR Trigger: CCTTAGCTCGCCGGCTCCCAGCCTTTGATGCCACAAGTAAACAAACCTCGCATGTCGCCTTCTGCTGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS GCA 72 bp | GATCTCCTTCTTCGCTTGAGAAGCCTGGCAAGTAGGTaGTCCAGTGGGTGGGGACCAGTGGGGGATTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: DLLLRLRSLASR*SSGWGPVGDLL Trigger: CAACAAATCCCCCACTGGTCCCCACCCACTGGAGCACCTACTTGCCAGGCTTCTCAAGCGAAGAAGGAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 72 bp | GAGCCCTTGATACCTCTTGGCTTGTGGCCTGGAGGCTaGCTGGGGAGGCTGATATACAGAGTGACACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EPLIPLGLWPGG*LGRLIYRVTQD Trigger: ATCCTGTGTCACTCTGTATATCAGCCTCCCCAGCCAGCCTCCAGGCCACAAGCCAAGAGGTATCAAGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS TCA 72 bp | TGGGAGATGACATCAGAGTGGATCTCCTTCTTCGCTTaGGAAGCCTGGCAAGTAGGTGCTCCAGTGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WEMTSEWISFFA*EAWQVGAPVGG Trigger: CCCACCCACTGGAGCACCTACTTGCCAGGCTTCTCAAGCGAAGAAGGAGATCCACTCTGATGTCATCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS GCA 72 bp | GCTTCCAAGACCTCCAGGACCCAGCAGAAGGCGACATaGGAGGTTTGTTTACTTGTGGCATCAAAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASKTSRTQQKAT*EVCLLVASKAG Trigger: CCCAGCCTTTGATGCCACAAGTAAACAAACCTCGCATGTCGCCTTCTGCTGGGTCCTGGAGGTCTTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 72 bp | CTGGGAGATGACATCAGAGTGGATCTCCTTCTTCGCTaGAGAAGCCTGGCAAGTAGGTGCTCCAGTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGDDIRVDLLLR*RSLASRCSSGW Trigger: CCACCCACTGGAGCACCTACTTGCCAGGCTTCTCAAGCGAAGAAGGAGATCCACTCTGATGTCATCTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS GCA 72 bp | ACTAGGGCCAAGTTGGGAGGAAGACAGATCCTCTGGTaGAGATCCAGCTTGTATGGGCAAAGCCAAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TRAKLGGRQILW*RSSLYGQSQRS Trigger: GCTCCTTTGGCTTTGCCCATACAAGCTGGATCTGCACCAGAGGATCTGTCTTCCTCCCAACTTGGCCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 72 bp | AGGAAGACAGATCCTCTGGTGCAGATCCAGCTTGTATaGGCAAAGCCAAAGGAGCTGGAACTGGGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RKTDPLVQIQLV*AKPKELELGRL Trigger: CAACCTCCCCAGTTCCAGCTCCTTTGGCTTTGCCCATACAAGCTGGATCTGCACCAGAGGATCTGTCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CCA 72 bp | AGGACTAGGGCCAAGTTGGGAGGAAGACAGATCCTCTaGTGCAGATCCAGCTTGTATGGGCAAAGCCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: RTRAKLGGRQIL*CRSSLYGQSQR Trigger: CCTTTGGCTTTGCCCATACAAGCTGGATCTGCACCAGAGGATCTGTCTTCCTCCCAACTTGGCCCTAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CAA 72 bp | GGAGCATACAATCGGGTTTTATACCGAGACATTCCATaGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAYNRVLYRDIP*PRDRQETDAFL Trigger: GAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 72 bp | GGTGGGAGGCCCCAAGGATACATTGTTAATTTCAGGTaGGAGATGACAGGGCCACAGCCATCTATCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: GGRPQGYIVNFR*EMTGPQPSITV Trigger: CACAGTGATAGATGGCTGTGGCCCTGTCATCTCTCACCTGAAATTAACAATGTATCCTTGGGGCCTCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS GCA 72 bp | GAGCATACAATCGGGTTTTATACCGAGACATTCCATTaGCCAGGGACAGGCAGGAGACAGATGCCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EHTIGFYTETFH*PGTGRRQMPSS Trigger: AGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 90 bp | GACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTaGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: DIPLPRDRQETDAFL*SQLQEAFLPLLLIL Trigger: GAGGATTAGTAAAAGAGGAAGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 72 bp | GGCCCCAAGGATACATTGTTAATTTCAGGTGAGAGATaGCAGGGCCACAGCCATCTATCACTGTGCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GPKDTLLISGER*QGHSHLSLCRE Trigger: TTCCCTGCACAGTGATAGATGGCTGTGGCCCTGTCATCTCTCACCTGAAATTAACAATGTATCCTTGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS TCA 72 bp | GGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTaGTCATCTGTGGGTGTTTCTCGAAGAGGGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: GSRQPLSSLSIY*SSVGVSRRGGC Trigger: ACATCCCCCTCTTCGAGAAACACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 72 bp | ACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTaGGTTCCCTTAGTATTTATTGATCATCTGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TSVQHMEDPASL*VPLVFIDHLWV Trigger: CACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGCTGAACGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 72 bp | ACATCTTGCACCGCCCTTAATCCATTCAACTCTGAGTaGACACAGCACATGTTTCAGAGAGCACGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: TSCTALNPFNSE*TQHMFQRARGW Trigger: CCAACCCCGTGCTCTCTGAAACATGTGCTGTGTCAACTCAGAGTTGAATGGATTAAGGGCGGTGCAAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS CAA 72 bp | ATACACATAAACATCTCAATGCTTTACAAAGCAGTATaGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: IHINISMLYKAV*LPAGPTSSPKA Trigger: CGCCTTAGGGCTGGAGGTGGGACCTGCGGGCAGCAATACTGCTTTGTAAAGCATTGAGATGTTTATGTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 90 bp | TCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATaGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SVDGAYNRVLYRDIP*PRDRQETDAFLLSQ Trigger: TTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTCCATCTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 72 bp | CATTCTTTGGTGAGCCAGCTCCTCATGGGGACCAGTTaGGTCAGTAGTTTTATCAGCATGCAGGATCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HSLVSQLLMGTS*VSSFISMQDLK Trigger: CTTCAGATCCTGCATGCTGATAAAACTACTGACTCAACTGGTCCCCATGAGGAGCTGGCTCACCAAAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 72 bp | CAGGGCCACAGCCATCTATCACTGTGCAGGGAATGTTaGGAAGGTAAAGTTGACCAGATAGACACAGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: QGHSHLSLCREC*EGKVDQIDTVD Trigger: ATCCACTGTGTCTATCTGGTCAACTTTACCTTCCAAACATTCCCTGCACAGTGATAGATGGCTGTGGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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| CDS TCA 72 bp | CATGAAATAATTGGGATTGGAAACCGCATTCTTTGGTaGGCCAGCTCCTCATGGGGACCAGTTGAGTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: HEIIGIGNRILW*ASSSWGPVESV Trigger: TACTGACTCAACTGGTCCCCATGAGGAGCTGGCTCACCAAAGAATGCGGTTTCCAATCCCAATTATTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS GCA 72 bp | TGGAGGGCAAGGGGCTGGAAATTTGGGATTGTTGATTaGCTAAGCAAGGGGCATGAAATAATTGGGATTGGA | + |
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Preference number: 6 (lower is better) Translates to: WRARGWKFGIVD*LSKGHEIIGIG Trigger: TCCAATCCCAATTATTTCATGCCCCTTGCTTAGGCAATCAACAATCCCAAATTTCCAGCCCCTTGCCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CCA 72 bp | AAGAGTTTAATGATTGCAGGGCACCAAGTTTGGAGATaGGAGGAGACCTTCAAATCCATCTCCCCAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KSLMIAGHQVWR*EETFKSISPRS Trigger: ACTCCTTGGGGAGATGGATTTGAAGGTCTCCTCCCATCTCCAAACTTGGTGCCCTGCAATCATTAAACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CCA 72 bp | CAGAGAAAGAGTTTAATGATTGCAGGGCACCAAGTTTaGAGATGGGAGGAGACCTTCAAATCCATCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: QRKSLMIAGHQV*RWEETFKSISP Trigger: TGGGGAGATGGATTTGAAGGTCTCCTCCCATCTCCAAACTTGGTGCCCTGCAATCATTAAACTCTTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS CAA 72 bp | AAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTaGCATCATAGACAATGTAAAGGATTAAGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KRVSRQTREQRS*HHRQCKGLSAV Trigger: CACAGCACTTAATCCTTTACATTGTCTATGATGCAAAGACCTTTGTTCACGTGTTTGTCTGCTGACCCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333139.3 |
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| CDS TCA 72 bp | ATGTCTACTTCTTTCTACACAGACACAGTAACAATCTaGTCTCTCTTGCTTTTCCCCACACTAATTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: MSTSFYTDTVTI*SLLLFPTLIGF Trigger: AAAACCAATTAGTGTGGGGAAAAGCAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333139.3 ENST00000446232.1 |
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