Pregenerated sensors for C11ORF71 (Homo sapiens)
Ensembl gene IDs: ENSG00000180425Ensembl transcript IDs: ENST00000325636.8, ENST00000623205.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATTGTTGACCTCTGGGGAGGGTGCTCCCATCAGCTCAGCTTTGTaGCGACCTAAGAATATCCCTTCCACACCTTTCCTGATCCAATCG | + |
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Preference number: 1 (lower is better) Translates to: GLLTSGEGAPISSAL*RPKNIPSTPFLIQS Trigger: CGATTGGATCAGGAAAGGTGTGGAAGGGATATTCTTAGGTCGTCACAAAGCTGAGCTGATGGGAGCACCCTCCCCAGAGGTCAACAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR TCA 90 bp | GCTCAGCTTTGTGACGACCTAAGAATATCCCTTCCACACCTTTCCTaGTCCAATCGTTCTGGCTGCATAAAACCACCTAAATCAATCAAC | + |
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Preference number: 1 (lower is better) Translates to: AQLCDDLRISLPHLS*SNRSGCIKPPKSIN Trigger: GTTGATTGATTTAGGTGGTTTTATGCAGCCAGAACGATTGGATCAGGAAAGGTGTGGAAGGGATATTCTTAGGTCGTCACAAAGCTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR GCA 90 bp | TATTTGAAGATAATTATTTTAAGGAAGTCTAAACAGACAAGCGTCTaGTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: YLKIIILRKSKQTSV*WEKASLPAYIKSWH Trigger: GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGTCTGTTTAGACTTCCTTAAAATAATTATCTTCAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR CCA 90 bp | TTGAAGATAATTATTTTAAGGAAGTCTAAACAGACAAGCGTCTGCTaGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACTTA | + |
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Preference number: 1 (lower is better) Translates to: LKIIILRKSKQTSVC*EKASLPAYIKSWHL Trigger: TAAGTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGTCTGTTTAGACTTCCTTAAAATAATTATCTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGTGGATTGTTGACCTCTaGGGAGGGTGCTCCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: HLVASPSRIYSVIFLDGQWIVDL*GGCSHQ Trigger: CTGATGGGAGCACCCTCCCCAGAGGTCAACAATCCA...CTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR TCA 90 bp | GTACCTAATAAACAGCCCAGCGTGGTGATTCCTATTCACTTAGTAGCCTCCCCATGTTCACAAGCTAAGTaGGGGCCAGAGGAAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VPNKQPSVVIPIHLVASPCSQAK*GPEERC Trigger: ACACCTTTCCTCTGGCCCTCACTTAGCTTGTGAACA...TGGGGAGGCTACTAAGTGAATAGGAATCACCACGCTGGGCTGTTTATTAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACCTTCCACACCTTTCCTaGTCCAATCGTTCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TSVCWEKASLPAYIKSWHLPHLS*SNRSGC Trigger: GCAGCCAGAACGATTGGATCAGGAAAGGTGTGGAAG...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCGACCTCTGGGGAGGGTaGTCCCATCAGCTCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLMARLCKIHTVFTTGIPDLWGG*SHQLSF Trigger: AAAGCTGAGCTGATGGGAGCACCCTCCCCAGAGGTC...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR TCA 90 bp | GTACCTAATAAACAGCCCAGCGTGGTGATTCCTATTCACTTAGTAGCCTCCCCACTAGAATATACTCCGTaGTCTTTCTTGATGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VPNKQPSVVIPIHLVASPLEYTP*SFLMAR Trigger: TCTGGCCATCAAGAAAGATCACGGAGTATATTCTAG...TGGGGAGGCTACTAAGTGAATAGGAATCACCACGCTGGGCTGTTTATTAGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCATCAGCTCAGCTTTGTaGCGACCTAAGAATATCCCT | + |
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Preference number: 2 (lower is better) Translates to: FLMARLCKIHTVFTTGIPISSAL*RPKNIP Trigger: AGGGATATTCTTAGGTCGTCACAAAGCTGAGCTGAT...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATTCACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATAGGAGGGCACTACAGTaGGTAGATGAACAGTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PIHLVASPSRIYSVIFLDRRALQ*VDEQFS Trigger: AGAAAACTGTTCATCTACTCACTGTAGTGCCCTCCT...ATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTGAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGATAAAACAACACGATTaGTGCTACACCAAGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: HLVASPSRIYSVIFLDGQIKQHD*CYTKKG Trigger: TCCTTTCTTGGTGTAGCAGCAATCGTGTTGTTTTAT...CTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCTCCAATCGTTCTGGCTaGATAAAACCACCTAAATCA | + |
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Preference number: 2 (lower is better) Translates to: FLMARLCKIHTVFTTGIPSNRSG*IKPPKS Trigger: TGATTTAGGTGGTTTTATGCAGCCAGAACGATTGGA...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCAAACAACACGATTGCTaGTACACCAAGAAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: FLMARLCKIHTVFTTGIPKQHDC*YTKKGF Trigger: AAATCCTTTCTTGGTGTAGCAGCAATCGTGTTGTTT...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR TCA 72 bp | ACCTCTGGGGAGGGTGCTCCCATCAGCTCAGCTTTGTaGCGACCTAAGAATATCCCTTCCACACCTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TSGEGAPISSAL*RPKNIPSTPFL Trigger: CAGGAAAGGTGTGGAAGGGATATTCTTAGGTCGTCACAAAGCTGAGCTGATGGGAGCACCCTCCCCAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGGAGTTAACGAATGGATaGTTGACCTCTGGGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: HLVASPSRIYSVIFLDGQELTNG*LTSGEG Trigger: ACCCTCCCCAGAGGTCAACAATCCATTCGTTAACTC...CTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR TCA 72 bp | TGTGACGACCTAAGAATATCCCTTCCACACCTTTCCTaGTCCAATCGTTCTGGCTGCATAAAACCACCTAAA | + |
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Preference number: 3 (lower is better) Translates to: CDDLRISLPHLS*SNRSGCIKPPK Trigger: TTTAGGTGGTTTTATGCAGCCAGAACGATTGGATCAGGAAAGGTGTGGAAGGGATATTCTTAGGTCGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCTTAGTGCGACTGAGATaGGAGTCTGTTTGTAGACAT | + |
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Preference number: 3 (lower is better) Translates to: FLMARLCKIHTVFTTGIPLVRLR*ESVCRH Trigger: ATGTCTACAAACAGACTCCAATCTCAGTCGCACTAA...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR TCA 72 bp | AATGAACAAACACACATTTCAAGGAGGGCACTACAGTaGGTAGATGAACAGTTTTCTGATAGGAGATTGTAC | + |
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Preference number: 3 (lower is better) Translates to: NEQTHISRRALQ*VDEQFSDRRLY Trigger: GTACAATCTCCTATCAGAAAACTGTTCATCTACTCACTGTAGTGCCCTCCTTGAAATGTGTGTTTGTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR CCA 72 bp | ATTATTTTAAGGAAGTCTAAACAGACAAGCGTCTGCTaGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: IILRKSKQTSVC*EKASLPAYIKS Trigger: GCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGTCTGTTTAGACTTCCTTAAAATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR-3UTR CAA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCAATAAAACAACACGATaGCTGCTACACCAAGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: KSINCYTSLSARTYSYNSNKTTR*LLHQER Trigger: CCTTTCTTGGTGTAGCAGCAATCGTGTTGTTTTATT...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| 3UTR GCA 72 bp | ATAATTATTTTAAGGAAGTCTAAACAGACAAGCGTCTaGTGGGAAAAAGCTAGTCTACCTGCTTATATAAAG | + |
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Preference number: 3 (lower is better) Translates to: IIILRKSKQTSV*WEKASLPAYIK Trigger: CTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGTCTGTTTAGACTTCCTTAAAATAATTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | GTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGACTGTGCTCGGCCCGAACGCTTaGTCGCACCGCCTGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: VASPSRIYSVIFLDGQTVLGPNA*SHRLPR Trigger: CCTCGGCAGGCGGTGCGACCAAGCGTTCGGGCCGAG...CACAGTCTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACCTGACGCCCGCGGTCTaGGGTCGCCATGGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSVCWEKASLPAYIKSWHLTPAV*GRHGKS Trigger: GCTCTTCCCATGGCGACCTCAGACCGCGGGCGTCAG...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACGACCATCGCCAACGCTaGCGCCCGCGGTCTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TSVCWEKASLPAYIKSWHDHRQR*RPRSEV Trigger: GACCTCAGACCGCGGGCGTCAGCGTTGGCGATGGTC...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | GTACCTAATAAACAGCCCAGCGTGGTGATTCCTATTCACTTAGTAGCCTCCCCATGCCGAGGTCCTAGATaGATCGCTTCAGGCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VPNKQPSVVIPIHLVASPCRGPR*IASGLE Trigger: TTCCAGGCCTGAAGCGATTCATCTAGGACCTCGGCA...TGGGGAGGCTACTAAGTGAATAGGAATCACCACGCTGGGCTGTTTATTAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTGCCATCTGGTTCCCTTaGGCTCCGGCCGCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSAIWFP*APAATI Trigger: GATGGTGGCGGCCGGAGCCCAAGGGAACCAGATGGC...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTCGTTACGTCCCTTTGTaGAGGCAGGCCCTTCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSRYVPL*RQALRG Trigger: GCCGCGAAGGGCCTGCCTTCACAAAGGGACGTAACG...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTAGCGGTAGGCCACCCTaGTCCTCTGATCACCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSSGRPP*SSDHRR Trigger: CCTCCGGTGATCAGAGGAGCAGGGTGGCCTACCGCT...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACGAATCGCTTCAGGCCTaGAAACGAGGAAGCCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TSVCWEKASLPAYIKSWHESLQA*KRGSRL Trigger: GAGACGGCTTCCTCGTTTCCAGGCCTGAAGCGATTC...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGCTACACCAAGAAAGGATTTTAAAAAGGCCTGTTCACAAGCTAAGTGAGGGTAAGGTGAGAATCTaGCTTGGCGGCTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LLLHQERILKRPVHKLSEGKVRI*LGGSGP Trigger: GGGGCCGGAGCCGCCAAGCCAGATTCTCACCTTACC...CTCACTTAGCTTGTGAACAGGCCTTTTTAAAATCCTTTCTTGGTGTAGCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | CACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGCTTCCACACCTTTCCTaGTCCAATCGTTCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLVASPSRIYSVIFLDGQLPHLS*SNRSGC Trigger: GCAGCCAGAACGATTGGATCAGGAAAGGTGTGGAAG...CTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCGGTGAGAATCTGGCTTaGCGGCTCCGGCCCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSGENLA*RLRPRP Trigger: TGGCCGGGGCCGGAGCCGCCAAGCCAGATTCTCACC...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | CCTATTCACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATCTGTGTCGGACCCGATaGCTAAGCACACAGGAACCC | + |
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Preference number: 4 (lower is better) Translates to: PIHLVASPSRIYSVIFLDLCRTR*LSTQEP Trigger: GGGTTCCTGTGTGCTTAGTCATCGGGTCCGACACAG...ATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTGAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | CACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGGAAGTCCTAGCACACTaGCTTGCACATAGCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: HLVASPSRIYSVIFLDGQEVLAH*LAHSTQ Trigger: TTGAGTGCTATGTGCAAGTCAGTGTGCTAGGACTTC...CTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTTGGATTGTTGACCTCTaGGGAGGGTGCTCCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSWIVDL*GGCSHQ Trigger: CTGATGGGAGCACCCTCCCCAGAGGTCAACAATCCA...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | CCTATTCACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATTGTTCACAAGCTAAGTaGGGGCCAGAGGAAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PIHLVASPSRIYSVIFLDCSQAK*GPEERC Trigger: ACACCTTTCCTCTGGCCCTCACTTAGCTTGTGAACA...ATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTGAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | CCTATTCACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATACTGCCCGCAGTACTTaGGTTACGTCCCTTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PIHLVASPSRIYSVIFLDTARST*VTSLCE Trigger: TTCACAAAGGGACGTAACGCAAGTACTGCGGGCAGT...ATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTGAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCGCCATATTCAAACACTaGCCGCAGTACTTGCGTTAC | + |
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Preference number: 4 (lower is better) Translates to: FLMARLCKIHTVFTTGIPAIFKH*PQYLRY Trigger: GTAACGCAAGTACTGCGGGCAGTGTTTGAATATGGC...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCGACCTCTGGGGAGGGTaGTCCCATCAGCTCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSDLWGG*SHQLSF Trigger: AAAGCTGAGCTGATGGGAGCACCCTCCCCAGAGGTC...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCAGGGATTGGGTAAGGTaGGAATCTGGCTTGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSRDWVR*ESGLAA Trigger: AGCCGCCAAGCCAGATTCTCACCTTACCCAATCCCT...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCACAGGAACCCATAACTaGGCCTGCGGAAGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSTGTHN*ACGRAR Trigger: TCTGGCTCTTCCGCAGGCTCAGTTATGGGTTCCTGT...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | GTACCTAATAAACAGCCCAGCGTGGTGATTCCTATTCACTTAGTAGCCTCCCCAAAACAACACGATTGCTaGTACACCAAGAAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: VPNKQPSVVIPIHLVASPKQHDC*YTKKGF Trigger: AAATCCTTTCTTGGTGTAGCAGCAATCGTGTTGTTT...TGGGGAGGCTACTAAGTGAATAGGAATCACCACGCTGGGCTGTTTATTAGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | GTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGACTGTGATAAAACAACACGATTaGTGCTACACCAAGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: VASPSRIYSVIFLDGQTVIKQHD*CYTKKG Trigger: TCCTTTCTTGGTGTAGCAGCAATCGTGTTGTTTTAT...CACAGTCTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACATGGAAGATGGTAAATaGCAAGGAAAAGATGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TSVCWEKASLPAYIKSWHMEDGK*QGKDGR Trigger: CCTTCCATCTTTTCCTTGGCATTTACCATCTTCCAT...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGCTACACCAAGAAAGGATTTTAAAAAGGCCTGTTCACAAGCTAAGTGAGATCAGCTCAGCTTTGTaGCGACCTAAGAATATCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLLHQERILKRPVHKLSEISSAL*RPKNIP Trigger: AGGGATATTCTTAGGTCGTCACAAAGCTGAGCTGAT...CTCACTTAGCTTGTGAACAGGCCTTTTTAAAATCCTTTCTTGGTGTAGCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | TTGCTGCTACACCAAGAAAGGATTTTAAAAAGGCCTGTTCACAAGCTAAGTGAGGCAATCAAACGCTGTTaGAGCACACTTCTTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLHQERILKRPVHKLSEAIKRC*STLLRR Trigger: TCTCCTAAGAAGTGTGCTGCAACAGCGTTTGATTGC...CTCACTTAGCTTGTGAACAGGCCTTTTTAAAATCCTTTCTTGGTGTAGCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTGGTGTTCGTTTAAACTaGAATTCGAGCTGCGATAAC | + |
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Preference number: 4 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSGVRLN*NSSCDN Trigger: GTTATCGCAGCTCGAATTTCAGTTTAAACGAACACC...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGCTACACCAAGAAAGGATTTTAAAAAGGCCTGTTCACAAGCTAAGTGAGCTAGAATATACTCCGTaGTCTTTCTTGATGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLHQERILKRPVHKLSELEYTP*SFLMAR Trigger: TCTGGCCATCAAGAAAGATCACGGAGTATATTCTAG...CTCACTTAGCTTGTGAACAGGCCTTTTTAAAATCCTTTCTTGGTGTAGCAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTAAACAGACAAGCGTCTaGTGGGAAAAAGCTAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSKQTSV*WEKASL Trigger: TAGACTAGCTTTTTCCCAGCAGACGCTTGTCTGTTT...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | CACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGGCTTATATAAAGAGCTaGCACTTACAAAACCCATTA | + |
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Preference number: 4 (lower is better) Translates to: HLVASPSRIYSVIFLDGQAYIKS*HLQNPL Trigger: TAATGGGTTTTGTAAGTGCCAGCTCTTTATATAAGC...CTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCCAGACAAGCGTCTGCTaGGAAAAAGCTAGTCTACCT | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSQTSVC*EKASLP Trigger: AGGTAGACTAGCTTTTTCCCAGCAGACGCTTGTCTG...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCAGGAGGGCACTACAGTaGGTAGATGAACAGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSRRALQ*VDEQFS Trigger: AGAAAACTGTTCATCTACTCACTGTAGTGCCCTCCT...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR TCA 90 bp | AAATCAATCAACTGTTACACTTCCCTTAGTGCTAGGACATATTCATATAACTCCCTCCGTGATCTTTCTTaGTGGCCAGACTGTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: KSINCYTSLSARTYSYNSLRDLS*WPDCVK Trigger: TTTTACACAGTCTGGCCATCAAGAAAGATCACGGAG...GGAGTTATATGAATATGTCCTAGCACTAAGGGAAGTGTAACAGTTGATTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS TCA 90 bp | GGAAGCCGTCTCCGGAGACCATCGCCAACGCTGACGCCCGCGGTCTaGGGTCGCCATGGGAAGAGCGGTAGGCCACCCTGCTCCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: GSRLRRPSPTLTPAV*GRHGKSGRPPCSSD Trigger: ATCAGAGGAGCAGGGTGGCCTACCGCTCTTCCCATGGCGACCTCAGACCGCGGGCGTCAGCGTTGGCGATGGTCTCCGGAGACGGCTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 90 bp | AGGCCTGGAAACGAGGAAGCCGTCTCCGGAGACCATCGCCAACGCTaGCGCCCGCGGTCTGAGGTCGCCATGGGAAGAGCGGTAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RPGNEEAVSGDHRQR*RPRSEVAMGRAVGH Trigger: GTGGCCTACCGCTCTTCCCATGGCGACCTCAGACCGCGGGCGTCAGCGTTGGCGATGGTCTCCGGAGACGGCTTCCTCGTTTCCAGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 90 bp | CTCTCGGCCCGAACGCTTGGTCGCACCGCCTGCCGAGGTCCTAGATaGATCGCTTCAGGCCTGGAAACGAGGAAGCCGTCTCCGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: LSARTLGRTACRGPR*IASGLETRKPSPET Trigger: GGTCTCCGGAGACGGCTTCCTCGTTTCCAGGCCTGAAGCGATTCATCTAGGACCTCGGCAGGCGGTGCGACCAAGCGTTCGGGCCGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 90 bp | GCCCTTCGCGGCTCCCCAGATCAGTCCAGCCTGTGTCGGACCCGATaGCTAAGCACACAGGAACCCATAACTGAGCCTGCGGAAGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ALRGSPDQSSLCRTR*LSTQEPITEPAEEP Trigger: TGGCTCTTCCGCAGGCTCAGTTATGGGTTCCTGTGTGCTTAGTCATCGGGTCCGACACAGGCTGGACTGATCTGGGGAGCCGCGAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS TCA 90 bp | CAGCCTGTGTCGGACCCGATGACTAAGCACACAGGAACCCATAACTaGGCCTGCGGAAGAGCCAGAAGCCGCCTTGCCTTTAACGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QPVSDPMTKHTGTHN*ACGRARSRLAFNEG Trigger: CCCCTCGTTAAAGGCAAGGCGGCTTCTGGCTCTTCCGCAGGCTCAGTTATGGGTTCCTGTGTGCTTAGTCATCGGGTCCGACACAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS TCA 90 bp | GCCATATTCAAACACTGCCCGCAGTACTTGCGTTACGTCCCTTTGTaGAGGCAGGCCCTTCGCGGCTCCCCAGATCAGTCCAGCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: AIFKHCPQYLRYVPL*RQALRGSPDQSSLC Trigger: ACACAGGCTGGACTGATCTGGGGAGCCGCGAAGGGCCTGCCTTCACAAAGGGACGTAACGCAAGTACTGCGGGCAGTGTTTGAATATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS GCA 90 bp | GGGACACATTGTTCAGGGCCATATTCAAACACTGCCCGCAGTACTTaGGTTACGTCCCTTTGTGAAGGCAGGCCCTTCGCGGCTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GTHCSGPYSNTARST*VTSLCEGRPFAAPQ Trigger: CTGGGGAGCCGCGAAGGGCCTGCCTTCACAAAGGGACGTAACGCAAGTACTGCGGGCAGTGTTTGAATATGGCCCTGAACAATGTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | GTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGGCCAGACTGTGGGCCATCTGGTTCCCTaGGGCTCCGGCCGCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VASPSRIYSVIFLDGQTVGHLVP*GSGRHH Trigger: ATGGTGGCGGCCGGAGCCCAAGGGAACCAGATGGCC...CACAGTCTGGCCATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGCTACACCAAGAAAGGATTTTAAAAAGGCCTGTTCACAAGCTAAGTGAGTCTCGGCCCGAACGCTaGGTCGCACCGCCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLHQERILKRPVHKLSESRPER*VAPPAE Trigger: CTCGGCAGGCGGTGCGACCAAGCGTTCGGGCCGAGA...CTCACTTAGCTTGTGAACAGGCCTTTTTAAAATCCTTTCTTGGTGTAGCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS GCA 90 bp | AGCTTCAGGGTCCAGGTAGTAACTCCTAATGCAATCAAACGCTGTTaGAGCACACTTCTTAGGAGATCGGGTTCAACGGCAGGGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFRVQVVTPNAIKRC*STLLRRSGSTAGIG Trigger: CCCAATCCCTGCCGTTGAACCCGATCTCCTAAGAAGTGTGCTGCAACAGCGTTTGATTGCATTAGGAGTTACTACCTGGACCCTGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325636.8 |
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| CDS-3UTR CAA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACGAGCCAGAAGCCGCCTaGCCTTTAACGAGGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: TSVCWEKASLPAYIKSWHEPEAA*PLTRGI Trigger: GATACCCCTCGTTAAAGGCAAGGCGGCTTCTGGCTC...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS GCA 90 bp | GAAATTCGAGCTGCGATAACACCTCCTAATGCAATCAAACGCTGTTaGAGCACACTTCTTAGGAGATCGGGTTCAACGGCAGGGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EIRAAITPPNAIKRC*STLLRRSGSTAGIG Trigger: CCCAATCCCTGCCGTTGAACCCGATCTCCTAAGAAGTGTGCTGCAACAGCGTTTGATTGCATTAGGAGGTGTTATCGCAGCTCGAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACGAGGACAGGGACACATaGTTCAGGGCCATATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSVCWEKASLPAYIKSWHEDRDT*FRAIFK Trigger: TTTGAATATGGCCCTGAACAATGTGTCCCTGTCCTC...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTGTTCAACGGCAGGGATaGGGTAAGGTGAGAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSVQRQG*GKVRIW Trigger: CCAGATTCTCACCTTACCCAATCCCTGCCGTTGAAC...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | TTCTTGATGGCCAGACTGTGTAAAATTCATACAGTGTTTACTACAGGGATCCCCTTAACGAATGGATTGTaGACCTCTGGGGAGGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: FLMARLCKIHTVFTTGIPLTNGL*TSGEGA Trigger: AGCACCCTCCCCAGAGGTCAACAATCCATTCGTTAA...GGGGATCCCTGTAGTAAACACTGTATGAATTTTACACAGTCTGGCCATCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | CCTATTCACTTAGTAGCCTCCCCATCTAGAATATACTCCGTGATCTTTCTTGATGAGTTAACGAATGGATaGTTGACCTCTGGGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PIHLVASPSRIYSVIFLDELTNG*LTSGEG Trigger: ACCCTCCCCAGAGGTCAACAATCCATTCGTTAACTC...ATCAAGAAAGATCACGGAGTATATTCTAGATGGGGAGGCTACTAAGTGAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | ACAAGCGTCTGCTGGGAAAAAGCTAGTCTACCTGCTTATATAAAGAGCTGGCACTTAGTGCGACTGAGATaGGAGTCTGTTTGTAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TSVCWEKASLPAYIKSWHLVRLR*ESVCRH Trigger: ATGTCTACAAACAGACTCCAATCTCAGTCGCACTAA...GTGCCAGCTCTTTATATAAGCAGGTAGACTAGCTTTTTCCCAGCAGACGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCACTTCTTTTTCGCCAACAGAAGTAAAGGTAAAGGTTAAGTGTCTGAGTAATAAAACAACACGATaGCTGCTACACCAAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSTSFSPTEVKVKVKCLSNKTTR*LLHQER Trigger: CCTTTCTTGGTGTAGCAGCAATCGTGTTGTTTTATT...ACTCAGACACTTAACCTTTACCTTTACTTCTGTTGGCGAAAAAGAAGTGCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS CCA 72 bp | GGCTTGGCGGCTCCGGCCCCGGCCATCTGGTTCCCTTaGGCTCCGGCCGCCACCATCCACTCGACGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLAAPAPAIWFP*APAATIHSTAL Trigger: GAGAGCCGTCGAGTGGATGGTGGCGGCCGGAGCCCAAGGGAACCAGATGGCCGGGGCCGGAGCCGCCAAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CAA 72 bp | TGGCTTGGCGGCTCCGGCCCCGGCCATCTGGTTCCCTaGGGCTCCGGCCGCCACCATCCACTCGACGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WLGGSGPGHLVP*GSGRHHPLDGS Trigger: AGAGCCGTCGAGTGGATGGTGGCGGCCGGAGCCCAAGGGAACCAGATGGCCGGGGCCGGAGCCGCCAAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CAA 90 bp | GTGAGAATCTGGCTTGGCGGCTCCGGCCCCGGCCATCTGGTTCCCTaGGGCTCCGGCCGCCACCATCCACTCGACGGCTCTCGGCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VRIWLGGSGPGHLVP*GSGRHHPLDGSRPE Trigger: TTCGGGCCGAGAGCCGTCGAGTGGATGGTGGCGGCCGGAGCCCAAGGGAACCAGATGGCCGGGGCCGGAGCCGCCAAGCCAGATTCTCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CAA 90 bp | GGCTCCGGCCGCCACCATCCACTCGACGGCTCTCGGCCCGAACGCTaGGTCGCACCGCCTGCCGAGGTCCTAGATGAATCGCTTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSGRHHPLDGSRPER*VAPPAEVLDESLQA Trigger: GGCCTGAAGCGATTCATCTAGGACCTCGGCAGGCGGTGCGACCAAGCGTTCGGGCCGAGAGCCGTCGAGTGGATGGTGGCGGCCGGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 72 bp | CTCCGGAGACCATCGCCAACGCTGACGCCCGCGGTCTaGGGTCGCCATGGGAAGAGCGGTAGGCCACCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRRPSPTLTPAV*GRHGKSGRPPC Trigger: GCAGGGTGGCCTACCGCTCTTCCCATGGCGACCTCAGACCGCGGGCGTCAGCGTTGGCGATGGTCTCCGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 72 bp | AACGAGGAAGCCGTCTCCGGAGACCATCGCCAACGCTaGCGCCCGCGGTCTGAGGTCGCCATGGGAAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NEEAVSGDHRQR*RPRSEVAMGRA Trigger: CGCTCTTCCCATGGCGACCTCAGACCGCGGGCGTCAGCGTTGGCGATGGTCTCCGGAGACGGCTTCCTCGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CAA 72 bp | CGCCACCATCCACTCGACGGCTCTCGGCCCGAACGCTaGGTCGCACCGCCTGCCGAGGTCCTAGATGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: RHHPLDGSRPER*VAPPAEVLDES Trigger: CGATTCATCTAGGACCTCGGCAGGCGGTGCGACCAAGCGTTCGGGCCGAGAGCCGTCGAGTGGATGGTGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CCA 72 bp | CGGGTTCAACGGCAGGGATTGGGTAAGGTGAGAATCTaGCTTGGCGGCTCCGGCCCCGGCCATCTGGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RVQRQGLGKVRI*LGGSGPGHLVP Trigger: GGGAACCAGATGGCCGGGGCCGGAGCCGCCAAGCCAGATTCTCACCTTACCCAATCCCTGCCGTTGAACCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CCA 72 bp | CCGCCTGCCGAGGTCCTAGATGAATCGCTTCAGGCCTaGAAACGAGGAAGCCGTCTCCGGAGACCATCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPAEVLDESLQA*KRGSRLRRPSP Trigger: TGGCGATGGTCTCCGGAGACGGCTTCCTCGTTTCCAGGCCTGAAGCGATTCATCTAGGACCTCGGCAGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 72 bp | CGAACGCTTGGTCGCACCGCCTGCCGAGGTCCTAGATaGATCGCTTCAGGCCTGGAAACGAGGAAGCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RTLGRTACRGPR*IASGLETRKPS Trigger: AGACGGCTTCCTCGTTTCCAGGCCTGAAGCGATTCATCTAGGACCTCGGCAGGCGGTGCGACCAAGCGTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS CAA 90 bp | GCTGTTGCAGCACACTTCTTAGGAGATCGGGTTCAACGGCAGGGATaGGGTAAGGTGAGAATCTGGCTTGGCGGCTCCGGCCCCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVAAHFLGDRVQRQG*GKVRIWLGGSGPGH Trigger: ATGGCCGGGGCCGGAGCCGCCAAGCCAGATTCTCACCTTACCCAATCCCTGCCGTTGAACCCGATCTCCTAAGAAGTGTGCTGCAACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 72 bp | AAACACTGCCCGCAGTACTTGCGTTACGTCCCTTTGTaGAGGCAGGCCCTTCGCGGCTCCCCAGATCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KHCPQYLRYVPL*RQALRGSPDQS Trigger: GGACTGATCTGGGGAGCCGCGAAGGGCCTGCCTTCACAAAGGGACGTAACGCAAGTACTGCGGGCAGTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 72 bp | GGCTCCCCAGATCAGTCCAGCCTGTGTCGGACCCGATaGCTAAGCACACAGGAACCCATAACTGAGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSPDQSSLCRTR*LSTQEPITEPA Trigger: CGCAGGCTCAGTTATGGGTTCCTGTGTGCTTAGTCATCGGGTCCGACACAGGCTGGACTGATCTGGGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS CAA 72 bp | GCACACTTCTTAGGAGATCGGGTTCAACGGCAGGGATaGGGTAAGGTGAGAATCTGGCTTGGCGGCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AHFLGDRVQRQG*GKVRIWLGGSG Trigger: GCCGGAGCCGCCAAGCCAGATTCTCACCTTACCCAATCCCTGCCGTTGAACCCGATCTCCTAAGAAGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS TCA 72 bp | TCGGACCCGATGACTAAGCACACAGGAACCCATAACTaGGCCTGCGGAAGAGCCAGAAGCCGCCTTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SDPMTKHTGTHN*ACGRARSRLAF Trigger: AAAGGCAAGGCGGCTTCTGGCTCTTCCGCAGGCTCAGTTATGGGTTCCTGTGTGCTTAGTCATCGGGTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS GCA 72 bp | TGTTCAGGGCCATATTCAAACACTGCCCGCAGTACTTaGGTTACGTCCCTTTGTGAAGGCAGGCCCTTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSGPYSNTARST*VTSLCEGRPFA Trigger: CGCGAAGGGCCTGCCTTCACAAAGGGACGTAACGCAAGTACTGCGGGCAGTGTTTGAATATGGCCCTGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325636.8 ENST00000623205.2 |
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| CDS GCA 72 bp | GCTGCGATAACACCTCCTAATGCAATCAAACGCTGTTaGAGCACACTTCTTAGGAGATCGGGTTCAACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAITPPNAIKRC*STLLRRSGSTA Trigger: TGCCGTTGAACCCGATCTCCTAAGAAGTGTGCTGCAACAGCGTTTGATTGCATTAGGAGGTGTTATCGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623205.2 |
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| CDS GCA 72 bp | GTCCAGGTAGTAACTCCTAATGCAATCAAACGCTGTTaGAGCACACTTCTTAGGAGATCGGGTTCAACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VQVVTPNAIKRC*STLLRRSGSTA Trigger: TGCCGTTGAACCCGATCTCCTAAGAAGTGTGCTGCAACAGCGTTTGATTGCATTAGGAGTTACTACCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325636.8 |
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