Pregenerated sensors for C11ORF58 (Homo sapiens)
Ensembl gene IDs: ENSG00000110696Ensembl transcript IDs: ENST00000228136.9, ENST00000524461.1, ENST00000525106.1, ENST00000527893.5, ENST00000528634.5, ENST00000531658.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTGAGGTTGCAGTTAGCTaGGATCGCGCCACTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: EVETDYALTQSRYKGGGVEVAVS*DRATAL Trigger: GAGTGCAGTGGCGCGATCTCAGCTAACTGCAACCTC...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTGTGATCTTGGCTCACTaGAACCTCCGCTTCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: EVETDYALTQSRYKGGGVVILAH*NLRFLG Trigger: ACCCAGGAAGCGGAGGTTGCAGTGAGCCAAGATCAC...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTTTGCCCAGGCTGGAGTaGAATGGGGTGATCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: EVETDYALTQSRYKGGGVLPRLE*NGVILA Trigger: AGCCAAGATCACCCCATTGCACTCCAGCCTGGGCAA...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTCAGGCTGGAGTGCAATaGGGTGATCTTGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: EVETDYALTQSRYKGGGVQAGVQ*GDLGSL Trigger: CAGTGAGCCAAGATCACCCCATTGCACTCCAGCCTG...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTCTGGTCTCAAACTCCTaGCTTCAGGTGATCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: EVETDYALTQSRYKGGGVLVSNS*LQVIQP Trigger: TGGCTGGATCACCTGAAGTCAGGAGTTTGAGACCAG...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTTTTAGGATGTGGCTGTaGTGGAAACAAGTAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: EVETDYALTQSRYKGGGVFRMWL*WKQVME Trigger: TTCCATTACTTGTTTCCACCACAGCCACATCCTAAA...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCAGGAAACCAGGCCACATaGACCAACAGACCTAAATTT | + |
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Preference number: 2 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPGNQAT*TNRPKF Trigger: AAATTTAGGTCTGTTGGTCCATGTGGCCTGGTTTCC...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAGTGAGCCACCGCACATaGCAACACGTTCTACATTTC | + |
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Preference number: 2 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKVSHRT*QHVLHF Trigger: GAAATGTAGAACGTGTTGCCATGTGCGGTGGCTCAC...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR TCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCAAATCCCACAGACATTTaGAAATCAGTGGGCAAACTA | + |
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Preference number: 2 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPNPTDI*KSVGKL Trigger: TAGTTTGCCCACTGATTTTCAAATGTCTGTGGGATT...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAGCTCACAAACAGGTGTaGCTAAAGCCTTTGAACTTG | + |
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Preference number: 2 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKAHKQV*LKPLNL Trigger: CAAGTTCAAAGGCTTTAGTCACACCTGTTTGTGAGC...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR TCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCAGATACCAAGACAGCATaGCATCAGTTGTCTAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPDTKTA*HQLSNF Trigger: AAAATTAGACAACTGATGTCATGCTGTCTTGGTATC...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAATGTGCTCTCAAACTGTaGTTCAGGCACTCCAGAATT | + |
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Preference number: 2 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKCALKL*FRHSRI Trigger: AATTCTGGAGTGCCTGAACCACAGTTTGAGAGCACA...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR GCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCAGAATACAAACAACATTaGAATCTGCATCTGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPEYKQH*NLHLQT Trigger: TGTTTGCAGATGCAGATTGCAATGTTGTTTGTATTC...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAACAAGGCAACAACTTTaGGGTCTGATACATGAAATA | + |
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Preference number: 2 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKTRQQL*GLIHEI Trigger: TATTTCATGTATCAGACCCCAAAGTTGTTGCCTTGT...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CAA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCATGCAATGGGGTGATCTaGGCTCACTGCAACCTCCGC | + |
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Preference number: 3 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPCNGVI*AHCNLR Trigger: GCGGAGGTTGCAGTGAGCCAAGATCACCCCATTGCA...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR CCA 72 bp | CTTTCTCCAGAAATAACTGGTGAGGGTAGGAGGGCTTaGATACATCTAGGGCTGGGAATTTTCCAGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LSPEITGEGRRA*IHLGLGIFQEV Trigger: GACTTCCTGGAAAATTCCCAGCCCTAGATGTATCCAAGCCCTCCTACCCTCACCAGTTATTTCTGGAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR CCA 72 bp | AGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTaGCTGTGGTGGAAACAAGTAATGGAACCAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: RSCFRIFQVFRM*LWWKQVMEPKP Trigger: GGGCTTTGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CAA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCAAATGATATGGAAAAGTaGCCACTAAACTTTCCACTG | + |
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Preference number: 3 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPNDMEK*PLNFPL Trigger: CAGTGGAAAGTTTAGTGGCAACTTTTCCATATCATT...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAATCCCACAGACATTaGAAAATCAGTGGGCAAACT | + |
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Preference number: 3 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKQSHRH*KISGQT Trigger: AGTTTGCCCACTGATTTTCAAATGTCTGTGGGATTG...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR CCA 72 bp | ATACATCTAGGGCTGGGAATTTTCCAGGAAGTCGTTTaGGTTAACAATCATGATACTGAATTGATAGATCAG | + |
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Preference number: 3 (lower is better) Translates to: IHLGLGIFQEVV*VNNHDTELIDQ Trigger: CTGATCTATCAATTCAGTATCATGATTGTTAACCCAAACGACTTCCTGGAAAATTCCCAGCCCTAGATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| 3UTR GCA 72 bp | GAGAAGAGGACTTTTGCCTATGAATACAAACAACATTaGAATCTGCATCTGCAAACATTCTTTTCAATAGAC | + |
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Preference number: 3 (lower is better) Translates to: EKRTFAYEYKQH*NLHLQTFFSID Trigger: GTCTATTGAAAAGAATGTTTGCAGATGCAGATTGCAATGTTGTTTGTATTCATAGGCAAAAGTCCTCTTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR TCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTGCTCACAAACAGGTGTaGCTAAAGCCTTTGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: EVETDYALTQSRYKGGGVAHKQV*LKPLNL Trigger: CAAGTTCAAAGGCTTTAGTCACACCTGTTTGTGAGC...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTTGTGCTCTCAAACTGTaGTTCAGGCACTCCAGAATT | + |
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Preference number: 4 (lower is better) Translates to: EVETDYALTQSRYKGGGVCALKL*FRHSRI Trigger: AATTCTGGAGTGCCTGAACCACAGTTTGAGAGCACA...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR TCA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAGAGGTTGCAGTTAGCTaGGATCGCGCCACTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKEVAVS*DRATAL Trigger: GAGTGCAGTGGCGCGATCTCAGCTAACTGCAACCTC...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR TCA 90 bp | GAGGTGGAAACAGACTACGCCCTAACACAGAGCAGGTATAAAGGAGGAGGAGTTGATACCAAGACAGCATaGCATCAGTTGTCTAATTTT | + |
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Preference number: 4 (lower is better) Translates to: EVETDYALTQSRYKGGGVDTKTA*HQLSNF Trigger: AAAATTAGACAACTGATGTCATGCTGTCTTGGTATC...AACTCCTCCTCCTTTATACCTGCTCTGTGTTAGGGCGTAGTCTGTTTCCACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR CCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCAAGGATGTGGCTGTGGTaGAAACAAGTAATGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPRMWLW*KQVMEP Trigger: TGGTTCCATTACTTGTTTCCACCACAGCCACATCCT...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR CCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCACAAGTATTTAGGATGTaGCTGTGGTGGAAACAAGTA | + |
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Preference number: 4 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPQVFRM*LWWKQV Trigger: TACTTGTTTCCACCACAGCCACATCCTAAATACTTG...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR CCA 90 bp | CGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAACAAGTAATGGAACCATTCCAGGAAGTCGTTTaGGTTAACAATCATGATACT | + |
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Preference number: 4 (lower is better) Translates to: RIFQVFRMWLWWKQVMEPFQEVV*VNNHDT Trigger: AGTATCATGATTGTTAACCCAAACGACTTCCTGGAA...TGGTTCCATTACTTGTTTCCACCACAGCCACATCCTAAATACTTGGAATATCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR GCA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAGAATACAAACAACATTaGAATCTGCATCTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKEYKQH*NLHLQT Trigger: TGTTTGCAGATGCAGATTGCAATGTTGTTTGTATTC...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS GCA 90 bp | GTAAATACTGATAAAGCTTCTCTGGCTTGCGTGCCACTCACCTCCTaGTATGTGGTCCAGTTTCTAACAGGCCAGGGATGGGTACCGGGG | + |
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Preference number: 5 (lower is better) Translates to: VNTDKASLACVPLTS*YVVQFLTGQGWVPG Trigger: CCCCGGTACCCATCCCTGGCCTGTTAGAAACTGGACCACATAGCAGGAGGTGAGTGGCACGCAAGCCAGAGAAGCTTTATCAGTATTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 90 bp | AAGCCATTGGGAGCAGCTGTAAATACTGATAAAGCTTCTCTGGCTTaGGTGCCACTCACCTCCTGCTATGTGGTCCAGTTTCTAACAGGC | + |
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Preference number: 5 (lower is better) Translates to: KPLGAAVNTDKASLA*VPLTSCYVVQFLTG Trigger: GCCTGTTAGAAACTGGACCACATAGCAGGAGGTGAGTGGCACGCAAGCCAGAGAAGCTTTATCAGTATTTACAGCTGCTCCCAATGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 90 bp | CCAATTGCTAGATCCCAGCTGAAGGCCAGTGCTTCTCTTCGCCATTaGCTTAGAGCTTTGCCACAAGTCTGTGTGTCTTTGTTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PIARSQLKASASLRH*LRALPQVCVSLFCQ Trigger: CTGGCAAAACAAAGACACACAGACTTGTGGCAAAGCTCTAAGTCAATGGCGAAGAGAAGCACTGGCCTTCAGCTGGGATCTAGCAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527893.5 |
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| CDS TCA 90 bp | CATCTAGCTATGGTGCTAGCCAGAAGAGGAACATGTGCCACCTTTTaGACTGCAGGCTCTCCTAAGAGTTCACAACAGATGTCCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: HLAMVLARRGTCATF*TAGSPKSSQQMSLA Trigger: TGCTAAGGACATCTGTTGTGAACTCTTAGGAGAGCCTGCAGTTCAAAAGGTGGCACATGTTCCTCTTCTGGCTAGCACCATAGCTAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 90 bp | ATGACACAGTACACAGACTCACATTCAGAAGCAAGCTCTTTGACCTaGGTAGTGAAAACAGAAAGCCGTCCAGTCATGGCAGCTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: MTQYTDSHSEASSLT*VVKTESRPVMAAAP Trigger: TGGAGCAGCTGCCATGACTGGACGGCTTTCTGTTTTCACTACTCAGGTCAAAGAGCTTGCTTCTGAATGTGAGTCTGTGTACTGTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 90 bp | CACCTTGTCCCAGGTGAGGCTGTTAATTCAGCCTGGAACCCAGAATaGAAAGGTACTTGGAGAACATCTGAACATGACCTCAAGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: HLVPGEAVNSAWNPE*KGTWRTSEHDLKSE Trigger: TTCAGACTTGAGGTCATGTTCAGATGTTCTCCAAGTACCTTTTCATTCTGGGTTCCAGGCTGAATTAACAGCCTCACCTGGGACAAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527893.5 |
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| CDS TCA 90 bp | CTCATTTTGGCTAGGGTTAGCTTGTGGGCTTACCAAAACTGTGACTaGGACAAATGCACAGTGCAGGAAAGAGACATGGATGGAAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LILARVSLWAYQNCD*DKCTVQERDMDGSG Trigger: ACCACTTCCATCCATGTCTCTTTCCTGCACTGTGCATTTGTCTCAGTCACAGTTTTGGTAAGCCCACAAGCTAACCCTAGCCAAAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 90 bp | TGTCACTACAGAAAACCCTGTTTCACAAAGACAGGAGGTTGGAAATaGAAGCAGGCTTTCCAGTGCTTTCGTGGCAATCTCAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: CHYRKPCFTKTGGWK*KQAFQCFRGNLRMF Trigger: GAACATCCTGAGATTGCCACGAAAGCACTGGAAAGCCTGCTTCCATTTCCAACCTCCTGTCTTTGTGAAACAGGGTTTTCTGTAGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 90 bp | CTAGATGCAGCTTGTTACTTGCCACTCACTGAGAGGGTTTTGATATaGGTCTGCAAGCAGTTGATTGATTACGGTCTCTGTGCAGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LDAACYLPLTERVLI*VCKQLIDYGLCAVK Trigger: CTTGACTGCACAGAGACCGTAATCAATCAACTGCTTGCAGACTCATATCAAAACCCTCTCAGTGAGTGGCAAGTAACAAGCTGCATCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 90 bp | TGTTTCACAAAGACAGGAGGTTGGAAATGGAAGCAGGCTTTCCAGTaGTTTCGTGGCAATCTCAGGATGTTCCACTTTGTCTTTAATCCA | + |
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Preference number: 5 (lower is better) Translates to: CFTKTGGWKWKQAFQ*FRGNLRMFHFVFNP Trigger: TGGATTAAAGACAAAGTGGAACATCCTGAGATTGCCACGAAAGCACTGGAAAGCCTGCTTCCATTTCCAACCTCCTGTCTTTGTGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 90 bp | ATGCACATCCTCCTGAAAAATGTATCACACAAAAACAAGCATTGTTaGCTTGCTGTCAACACTGGTAGACTCATTAACCTGGATTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: MHILLKNVSHKNKHC*LAVNTGRLINLDWV Trigger: TACCCAATCCAGGTTAATGAGTCTACCAGTGTTGACAGCAAGGCAACAATGCTTGTTTTTGTGTGATACATTTTTCAGGAGGATGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 90 bp | TGGTCTCCATGTGGTGAAGCACTTTTAAAGGTTTCATGGCTTTTCTaGATAGCTGGTCATCACATATTAGACAAAGCAGGTTTGGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: WSPCGEALLKVSWLF*IAGHHILDKAGLEN Trigger: ATTCTCCAAACCTGCTTTGTCTAATATGTGATGACCAGCTATCCAGAAAAGCCATGAAACCTTTAAAAGTGCTTCACCACATGGAGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 90 bp | GCTGTCAACACTGGTAGACTCATTAACCTGGATTGGGTACCACAGTaGCTCATTAATTCTAACAACTGTGCCTCATATCCTCTATTAATT | + |
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Preference number: 5 (lower is better) Translates to: AVNTGRLINLDWVPQ*LINSNNCASYPLLI Trigger: AATTAATAGAGGATATGAGGCACAGTTGTTAGAATTAATGAGTCACTGTGGTACCCAATCCAGGTTAATGAGTCTACCAGTGTTGACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 90 bp | GTGGCAATCTCAGGATGTTCCACTTTGTCTTTAATCCAGAATGTATaGAGATGTGAAGTTGTCTCAAACATACTTTTAAGGGCAACATCA | + |
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Preference number: 5 (lower is better) Translates to: VAISGCSTLSLIQNV*RCEVVSNILLRATS Trigger: TGATGTTGCCCTTAAAAGTATGTTTGAGACAACTTCACATCTCCATACATTCTGGATTAAAGACAAAGTGGAACATCCTGAGATTGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 90 bp | CTCAGGATGTTCCACTTTGTCTTTAATCCAGAATGTATGGAGATGTaGAGTTGTCTCAAACATACTTTTAAGGGCAACATCATTTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LRMFHFVFNPECMEM*SCLKHTFKGNIICD Trigger: ATCACAAATGATGTTGCCCTTAAAAGTATGTTTGAGACAACTTCACATCTCCATACATTCTGGATTAAAGACAAAGTGGAACATCCTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS-3UTR CAA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAAATGATATGGAAAAGTaGCCACTAAACTTTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKNDMEK*PLNFPL Trigger: CAGTGGAAAGTTTAGTGGCAACTTTTCCATATCATT...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS-3UTR CAA 90 bp | TTTAGAAGTTGTTTTCGGATATTCCAAGTATTTAGGATGTGGCTGTGGTGGAAAATAAAGGAGGAGGAGTaGGTTAGAAGTGAATACTTT | + |
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Preference number: 5 (lower is better) Translates to: FRSCFRIFQVFRMWLWWKIKEEE*VRSEYF Trigger: AAAGTATTCACTTCTAACCAACTCCTCCTCCTTTAT...TTTCCACCACAGCCACATCCTAAATACTTGGAATATCCGAAAACAACTTCTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228136.9 |
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| CDS GCA 72 bp | CTATCAGCGTCACCTAGAGGGCTTGTTAAAACAGACTaGAGGGCTACAGCCCCAGAGATTCAGCGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSASPRGLVKTD*RATAPEIQRVW Trigger: CCAGACCCGCTGAATCTCTGGGGCTGTAGCCCTGCAGTCTGTTTTAACAAGCCCTCTAGGTGACGCTGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525106.1 |
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| CDS GCA 72 bp | GATAAAGCTTCTCTGGCTTGCGTGCCACTCACCTCCTaGTATGTGGTCCAGTTTCTAACAGGCCAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: DKASLACVPLTS*YVVQFLTGQGW Trigger: CCATCCCTGGCCTGTTAGAAACTGGACCACATAGCAGGAGGTGAGTGGCACGCAAGCCAGAGAAGCTTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | TCCTGCTATGTGGTCCAGTTTCTAACAGGCCAGGGATaGGTACCGGGGATTGGGAGCTCCTGCTTTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SCYVVQFLTGQG*VPGIGSSCFKA Trigger: AGCTTTAAAGCAGGAGCTCCCAATCCCCGGTACCCATCCCTGGCCTGTTAGAAACTGGACCACATAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | GACTGCAGGGCTACAGCCCCAGAGATTCAGCGGGTCTaGGGTGGAGCTCTAGGATTTGAATTTCAACAAATT | + |
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Preference number: 6 (lower is better) Translates to: DCRATAPEIQRV*GGALGFEFQQI Trigger: AATTTGTTGAAATTCAAATCCTAGAGCTCCACCCCAGACCCGCTGAATCTCTGGGGCTGTAGCCCTGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525106.1 |
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| CDS TCA 72 bp | AGATCCCAGCTGAAGGCCAGTGCTTCTCTTCGCCATTaGCTTAGAGCTTTGCCACAAGTCTGTGTGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RSQLKASASLRH*LRALPQVCVSL Trigger: CAAAGACACACAGACTTGTGGCAAAGCTCTAAGTCAATGGCGAAGAGAAGCACTGGCCTTCAGCTGGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527893.5 |
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| CDS GCA 72 bp | GGAGCAGCTGTAAATACTGATAAAGCTTCTCTGGCTTaGGTGCCACTCACCTCCTGCTATGTGGTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: GAAVNTDKASLA*VPLTSCYVVQF Trigger: AAACTGGACCACATAGCAGGAGGTGAGTGGCACGCAAGCCAGAGAAGCTTTATCAGTATTTACAGCTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 90 bp | CCACATCACCTTCTCCATCATGGTCTTCTACTTGTGAGCATGTTGTaGTTCACGCCTATTAAAAATGTGCCCTGGCCGGACATGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PHHLLHHGLLLVSML*FTPIKNVPWPDMVA Trigger: AGCCACCATGTCCGGCCAGGGCACATTTTTAATAGGCGTGAACAACAACATGCTCACAAGTAGAAGACCATGATGGAGAAGGTGATGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528634.5 |
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| CDS CAA 90 bp | CAGCCACATCACCTTCTCCATCATGGTCTTCTACTTGTGAGCATGTaGTTGTTCACGCCTATTAAAAATGTGCCCTGGCCGGACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: QPHHLLHHGLLLVSM*LFTPIKNVPWPDMV Trigger: CACCATGTCCGGCCAGGGCACATTTTTAATAGGCGTGAACAACAACATGCTCACAAGTAGAAGACCATGATGGAGAAGGTGATGTGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528634.5 |
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| CDS TCA 72 bp | ATGGTGCTAGCCAGAAGAGGAACATGTGCCACCTTTTaGACTGCAGGCTCTCCTAAGAGTTCACAACAGATG | + |
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Preference number: 6 (lower is better) Translates to: MVLARRGTCATF*TAGSPKSSQQM Trigger: CATCTGTTGTGAACTCTTAGGAGAGCCTGCAGTTCAAAAGGTGGCACATGTTCCTCTTCTGGCTAGCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 90 bp | CAGAATCCTTTAGTTCTCCTACAGCCAGAGCTGAGTCTCAAAAGTTaGCCTCTATCAGCGTCACCTAGAGGGCTTGTTAAAACAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: QNPLVLLQPELSLKS*PLSASPRGLVKTDC Trigger: GCAGTCTGTTTTAACAAGCCCTCTAGGTGACGCTGATAGAGGCAAACTTTTGAGACTCAGCTCTGGCTGTAGGAGAACTAAAGGATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525106.1 |
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| CDS TCA 72 bp | GCTAGGGTTAGCTTGTGGGCTTACCAAAACTGTGACTaGGACAAATGCACAGTGCAGGAAAGAGACATGGAT | + |
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Preference number: 6 (lower is better) Translates to: ARVSLWAYQNCD*DKCTVQERDMD Trigger: ATCCATGTCTCTTTCCTGCACTGTGCATTTGTCTCAGTCACAGTTTTGGTAAGCCCACAAGCTAACCCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 72 bp | AGGCCAGTGCTTCTCTTCGCCATTGACTTAGAGCTTTaGCACAAGTCTGTGTGTCTTTGTTTTGCCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RPVLLFAIDLEL*HKSVCLCFASR Trigger: TCTACTGGCAAAACAAAGACACACAGACTTGTGGCAAAGCTCTAAGTCAATGGCGAAGAGAAGCACTGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527893.5 |
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| CDS GCA 72 bp | GATTCTCATAAGGAGGCACAACCTAGATCCCTGGCTTaGACAGTTCACAATAGGGTTCATGCTCCTATGAGA | + |
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Preference number: 6 (lower is better) Translates to: DSHKEAQPRSLA*TVHNRVHAPMR Trigger: TCTCATAGGAGCATGAACCCTATTGTGAACTGTGCAAGCCAGGGATCTAGGTTGTGCCTCCTTATGAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 72 bp | TGCAGTCAAGCCTCTCTGCTAATGTTAATCTGTTTTTaGAGCCACTCCCCATTACCACCTCAGCTCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: CSQASLLMLICF*SHSPLPPQLQF Trigger: GAATTGGAGCTGAGGTGGTAATGGGGAGTGGCTGCAAAAACAGATTAACATTAGCAGAGAGGCTTGACTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | CATGAACAAAGTCGATTCACCTGGCTTATTCACAAATaGGTTGTGAATCCATTCCTTCCCAGTTCGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HEQSRFTWLIHK*VVNPFLPSSGL Trigger: GAGCCCCGAACTGGGAAGGAATGGATTCACAACCCATTTGTGAATAAGCCAGGTGAATCGACTTTGTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | AGAAAACCCTGTTTCACAAAGACAGGAGGTTGGAAATaGAAGCAGGCTTTCCAGTGCTTTCGTGGCAATCTC | + |
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Preference number: 6 (lower is better) Translates to: RKPCFTKTGGWK*KQAFQCFRGNL Trigger: GAGATTGCCACGAAAGCACTGGAAAGCCTGCTTCCATTTCCAACCTCCTGTCTTTGTGAAACAGGGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 72 bp | CTTCTCCATCATGGTCTTCTACTTGTGAGCATGTTGTaGTTCACGCCTATTAAAAATGTGCCCTGGCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLHHGLLLVSML*FTPIKNVPWPD Trigger: GTCCGGCCAGGGCACATTTTTAATAGGCGTGAACAACAACATGCTCACAAGTAGAAGACCATGATGGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528634.5 |
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| CDS CAA 72 bp | CACCTTCTCCATCATGGTCTTCTACTTGTGAGCATGTaGTTGTTCACGCCTATTAAAAATGTGCCCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: HLLHHGLLLVSM*LFTPIKNVPWP Trigger: CGGCCAGGGCACATTTTTAATAGGCGTGAACAACAACATGCTCACAAGTAGAAGACCATGATGGAGAAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528634.5 |
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| CDS CAA 72 bp | GTGCAGTCAAGCCTCTCTGCTAATGTTAATCTGTTTTaGCAGCCACTCCCCATTACCACCTCAGCTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: VQSSLSANVNLF*QPLPITTSAPI Trigger: AATTGGAGCTGAGGTGGTAATGGGGAGTGGCTGCAAAAACAGATTAACATTAGCAGAGAGGCTTGACTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 72 bp | AGTCTGGCTTTGAATGCAGCCACTCTATCTGCCAACTaGAACACAGTTTTGTTCTCCCCTGAGGTGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: SLALNAATLSAN*NTVLFSPEVTD Trigger: ATCTGTCACCTCAGGGGAGAACAAAACTGTGTTCAAGTTGGCAGATAGAGTGGCTGCATTCAAAGCCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 72 bp | TACACAGACTCACATTCAGAAGCAAGCTCTTTGACCTaGGTAGTGAAAACAGAAAGCCGTCCAGTCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: YTDSHSEASSLT*VVKTESRPVMA Trigger: TGCCATGACTGGACGGCTTTCTGTTTTCACTACTCAGGTCAAAGAGCTTGCTTCTGAATGTGAGTCTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 72 bp | AGGTGGCATTTTCCAACTAGCCAGCATCTCTACAGATaGCACAGTACACAGACTCACATTCAGAAGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: RWHFPTSQHLYR*HSTQTHIQKQA Trigger: AGCTTGCTTCTGAATGTGAGTCTGTGTACTGTGTCATCTGTAGAGATGCTGGCTAGTTGGAAAATGCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 72 bp | CAGAAAGCCGTCCAGTCATGGCAGCTGCTCCATCCCTaGATATATCGATACAAAATGACCAATTCAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QKAVQSWQLLHP*IYRYKMTNSVF Trigger: GAAAACTGAATTGGTCATTTTGTATCGATATATGCAGGGATGGAGCAGCTGCCATGACTGGACGGCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 72 bp | GAAGCCGTCTCTCTTCTGTGTATAAGAGAAGACGTGTaGTCTGTGTCTATCTTCTCACAGAGCTACATGAAC | + |
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Preference number: 6 (lower is better) Translates to: EAVSLLCIREDV*SVSIFSQSYMN Trigger: GTTCATGTAGCTCTGTGAGAAGATAGACACAGAGCACACGTCTTCTCTTATACACAGAAGAGAGACGGCTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 72 bp | TTAGTTCTCCTACAGCCAGAGCTGAGTCTCAAAAGTTaGCCTCTATCAGCGTCACCTAGAGGGCTTGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: LVLLQPELSLKS*PLSASPRGLVK Trigger: TTTAACAAGCCCTCTAGGTGACGCTGATAGAGGCAAACTTTTGAGACTCAGCTCTGGCTGTAGGAGAACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525106.1 |
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| CDS TCA 72 bp | TGGCTTGCACAGTTCACAATAGGGTTCATGCTCCTATaGGAATTTAATGCTGCCAATGATCTGATAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: WLAQFTIGFMLL*EFNAANDLIGC Trigger: GCATCCTATCAGATCATTGGCAGCATTAAATTCTCATAGGAGCATGAACCCTATTGTGAACTGTGCAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 72 bp | TGCCACTTTCTCTTTGTTGGCAGTATTAGAGTCTTCTaGTGTCTCATCATTGGGTCTTTCCCCCTTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: CHFLFVGSIRVF*CLIIGSFPLFK Trigger: TTTGAAAAGGGGGAAAGACCCAATGATGAGACAGCAGAAGACTCTAATACTGCCAACAAAGAGAAAGTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | GTTGCCTTGCTGTCAACACTGGTAGACTCATTAACCTaGATTGGGTACCACAGTGACTCATTAATTCTAACA | + |
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Preference number: 6 (lower is better) Translates to: VALLSTLVDSLT*IGYHSDSLILT Trigger: TGTTAGAATTAATGAGTCACTGTGGTACCCAATCCAGGTTAATGAGTCTACCAGTGTTGACAGCAAGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 90 bp | TTTGTCTTGAACTCTTGTGCTTTTTCTCTCTGTCATAAAAACACCTaGTCCCAGGTGAGGCTGTTAATTCAGCCTGGAACCCAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: FVLNSCAFSLCHKNT*SQVRLLIQPGTQNE Trigger: TTCATTCTGGGTTCCAGGCTGAATTAACAGCCTCACCTGGGACAAGGTGTTTTTATGACAGAGAGAAAAAGCACAAGAGTTCAAGACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000527893.5 |
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| CDS TCA 72 bp | ACTGGTAGACTCATTAACCTGGATTGGGTACCACAGTaGCTCATTAATTCTAACAACTGTGCCTCATATCCT | + |
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Preference number: 6 (lower is better) Translates to: TGRLINLDWVPQ*LINSNNCASYP Trigger: AGGATATGAGGCACAGTTGTTAGAATTAATGAGTCACTGTGGTACCCAATCCAGGTTAATGAGTCTACCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS GCA 72 bp | TGCTTATGTCCAGTCTACTCTGTAATCTTGTTTGGCTaGTGTCACTACAGAAAACCCTGTTTCACAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: CLCPVYSVILFG*CHYRKPCFTKT Trigger: TGTCTTTGTGAAACAGGGTTTTCTGTAGTGACAGCAGCCAAACAAGATTACAGAGTAGACTGGACATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | GTGTTGCTTATGTCCAGTCTACTCTGTAATCTTGTTTaGCTGCTGTCACTACAGAAAACCCTGTTTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: VLLMSSLLCNLV*LLSLQKTLFHK Trigger: TTTGTGAAACAGGGTTTTCTGTAGTGACAGCAGCCAAACAAGATTACAGAGTAGACTGGACATAAGCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 72 bp | TCCAGTGCTTTCGTGGCAATCTCAGGATGTTCCACTTaGTCTTTAATCCAGAATGTATGGAGATGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SSAFVAISGCST*SLIQNVWRCEV Trigger: AACTTCACATCTCCATACATTCTGGATTAAAGACAAAGTGGAACATCCTGAGATTGCCACGAAAGCACTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CCA 72 bp | AGCACTTTTAAAGGTTTCATGGCTTTTCTGGATAGCTaGTCATCACATATTAGACAAAGCAGGTTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: STFKGFMAFLDS*SSHIRQSRFGE Trigger: TTCTCCAAACCTGCTTTGTCTAATATGTGATGACCAGCTATCCAGAAAAGCCATGAAACCTTTAAAAGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 90 bp | AAGGTTGAAAATGTATTAGCATTTGAGACCACTAATTTAACCTTATaGGGTATCTACTATGTGCTGAAAACTATTCTAGGCTTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KVENVLAFETTNLTL*GIYYVLKTILGFWD Trigger: GTCCCAGAAGCCTAGAATAGTTTTCAGCACATAGTAGATACCCAATAAGGTTAAATTAGTGGTCTCAAATGCTAATACATTTTCAACCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524461.1 |
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| CDS TCA 72 bp | TGTGTCTATCTTCTCACAGAGCTACATGAACAGATGTaGATTAAGGGCATGTACTTTAATGTGGTTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: CVYLLTELHEQM*IKGMYFNVVEN Trigger: ATTTTCAACCACATTAAAGTACATGCCCTTAATTCACATCTGTTCATGTAGCTCTGTGAGAAGATAGACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS TCA 72 bp | TTCCACTTTGTCTTTAATCCAGAATGTATGGAGATGTaGAGTTGTCTCAAACATACTTTTAAGGGCAACATC | + |
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Preference number: 6 (lower is better) Translates to: FHFVFNPECMEM*SCLKHTFKGNI Trigger: GATGTTGCCCTTAAAAGTATGTTTGAGACAACTTCACATCTCCATACATTCTGGATTAAAGACAAAGTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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| CDS CAA 72 bp | GTATTTAAAGACTTGAATAGTTCTGCAGCTGTGGTGTaGGTTGAAAGCAAAAGTGCACATAATATATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VFKDLNSSAAVV*VESKSAHNISS Trigger: TGAGGATATATTATGTGCACTTTTGCTTTCAACCAACACCACAGCTGCAGAACTATTCAAGTCTTTAAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531658.1 |
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