RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF49 (Homo sapiens)

Ensembl gene IDs: ENSG00000149179

Ensembl transcript IDs: ENST00000278460.12, ENST00000378615.7, ENST00000378618.6, ENST00000395460.6, ENST00000522712.6, ENST00000525279.5, ENST00000525895.5, ENST00000525953.5, ENST00000526424.5, ENST00000526827.1, ENST00000527234.5, ENST00000527268.5, ENST00000527667.5, ENST00000527784.5, ENST00000528488.5, ENST00000529980.5, ENST00000531648.5, ENST00000532633.5, ENST00000532840.5, ENST00000533124.5, ENST00000534249.5, ENST00000624693.1

Found 941 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACGCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTC +
Preference number: 1 (lower is better)
Translates to: TPSSVPAPPKAGRWR*CPLDDVGTITVLGF
Trigger: GAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR GCA 90 bp TTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTaGCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGG +
Preference number: 1 (lower is better)
Translates to: FPDTGRTATPPRPPA*RPRPRQVVGGAAHW
Trigger: CCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 90 bp AGAGCCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: RANPGRGPGRQATGL*TGCDRVDQAWDLGQ
Trigger: CTGGCCCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR GCA 90 bp CCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTG +
Preference number: 1 (lower is better)
Translates to: PSSVPAPPKAGRWRC*PLDDVGTITVLGFL
Trigger: CAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 90 bp GCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACA +
Preference number: 1 (lower is better)
Translates to: ACRPRPRQVVGGAAH*TTSAQSLCWGSCLT
Trigger: TGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTaGGACCTGGGCCAGCCTGAAGAAGGGAAGAAGCCTGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: QATGLWTGCDRVDQA*DLGQPEEGKKPGGQ
Trigger: CTGCCCTCCAGGCTTCTTCCCTTCTTCAGGCTGGCCCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR CCA 90 bp GGGTGGGCACACCAAGGGCTGGGTGGGAGCAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCT +
Preference number: 1 (lower is better)
Translates to: GWAHQGLGGSRYRAL*AGPFGLLKSPTRLS
Trigger: AGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR TCA 90 bp GTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTaGAGCAGTGTCCTCTGGATCCTGCCTCCCTGCCCAGTGCCGGCC +
Preference number: 1 (lower is better)
Translates to: VKIKPLQGLAPCWSE*SSVLWILPPCPVPA
Trigger: GGCCGGCACTGGGCAGGGAGGCAGGATCCAGAGGACACTGCTTCACTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
3UTR GCA 90 bp CAGGCCTGGGACCTGGGCCAGCAGCCGTTCCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAG +
Preference number: 1 (lower is better)
Translates to: QAWDLGQQPFQLFIH*WVVHQIPLVRQSSE
Trigger: CTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGCTGGCCCAGGTCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR CCA 90 bp GAGAGCAGGGCCTCCATGCCCACTCTTAACACTAGGGTAAACCCCTaGGCTGCAGCCCCCAAAGGACTCAGAGGGAGGGACACCTCAGGC +
Preference number: 1 (lower is better)
Translates to: ESRASMPTLNTRVNP*AAAPKGLRGRDTSG
Trigger: GCCTGAGGTGTCCCTCCCTCTGAGTCCTTTGGGGGCTGCAGCCCAGGGGTTTACCCTAGTGTTAAGAGTGGGCATGGAGGCCCTGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR GCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCT +
Preference number: 1 (lower is better)
Translates to: WLFSNRPQRLCPPGT*VAGVTLDGARPCVA
Trigger: AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCAGGTCCTCATAGATGGCAGCCACAC +
Preference number: 1 (lower is better)
Translates to: VGGAAHWTTSAQSLC*GSCLTAGPHRWQPH
Trigger: GTGTGGCTGCCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR TCA 90 bp GGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: GPAWLFGFSPLMELL*GDEPYWGTRRGWLR
Trigger: TCTGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR GCA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: PGTCVAGVTLDGARP*VAIRVLPLNGVAVR
Trigger: CCTCACAGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR GCA 90 bp GCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTaGCTGACAGCAGGTCCTCATAGATGGCAGCCACACTGTCCAGGA +
Preference number: 1 (lower is better)
Translates to: AAHWTTSAQSLCWGS*LTAGPHRWQPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 90 bp ACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCACAGGCTGATAGGGCCAGGGAGAGCA +
Preference number: 1 (lower is better)
Translates to: TGYGVTRWPQHSLSA*GLSEVHRLIGPGRA
Trigger: TGCTCTCCCTGGCCCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCAGCTTGGGGCCTAAGTGAAGTTCAC +
Preference number: 1 (lower is better)
Translates to: ALKRLGGLTGYGVTR*PQHSLSAWGLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CCA 90 bp GGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGAG +
Preference number: 1 (lower is better)
Translates to: GPFGLLKSPTRLSLQ*SHHSLHPLFGNDGE
Trigger: CTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR GCA 90 bp GCACCACTTTACTCCAGCCTAGGCAAGAGTGAGACCCGCCATTTTTaGCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATA +
Preference number: 1 (lower is better)
Translates to: APLYSSLGKSETRHF*PQFGSISRRPVKMI
Trigger: TATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGGGTCTCACTCTTGCCTAGGCTGGAGTAAAGTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526424.5
3UTR TCA 90 bp CTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCCATAGAAGGTCAGTCTCTGAACATT +
Preference number: 1 (lower is better)
Translates to: LVRQSSEGLVDSTVL*ESHEESIEGQSLNI
Trigger: AATGTTCAGAGACTGACCTTCTATGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 90 bp GTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGT +
Preference number: 1 (lower is better)
Translates to: VRKHLQKARKNDTLL*GVAWTKLNSRKRMC
Trigger: ACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCACCCCCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
3UTR TCA 90 bp GTGAGCTCCAGCGGGAAATCAGGACACAGTAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTT +
Preference number: 1 (lower is better)
Translates to: VSSSGKSGHSNCSKQ*YSFMVSKSPFLPTV
Trigger: AACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGCTGGAGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR TCA 90 bp GTGAGCTCCAGCGGGAAATCAGGACACAGTAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGCAAATCTGGTCTTGGTAGAGCTGTT +
Preference number: 1 (lower is better)
Translates to: VSSSGKSGHSNCSKQ*YSFMVSKSGLGRAV
Trigger: AACAGCTCTACCAAGACCAGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGCTGGAGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR CCA 90 bp AAGGGGTCAAGACTTGAAGCAGTTTTTGCAAGTGAAATCATCTTCTaGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACA +
Preference number: 1 (lower is better)
Translates to: KGSRLEAVFASEIIF*PTLHITKATGCSPT
Trigger: TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCTTCAAGTCTTGACCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CCA 90 bp GTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTaGCATACACTGTTAAAACCCCAGAAGAGTCATATTTCACTTGGC +
Preference number: 1 (lower is better)
Translates to: VAWTKLNSRKRMCVP*HTLLKPQKSHISLG
Trigger: GCCAAGTGAAATATGACTCTTCTGGGGTTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR CCA 90 bp TATTTCACTTGGCAAGGAGCCTCAAGAGTGCTGGTACAGATTAAATaGTATAGAAACTTGACCCGTAGGCTTGTCAGTTCACTTGTCTGT +
Preference number: 1 (lower is better)
Translates to: YFTWQGASRVLVQIK*YRNLTRRLVSSLVC
Trigger: ACAGACAAGTGAACTGACAAGCCTACGGGTCAAGTTTCTATACCATTTAATCTGTACCAGCACTCTTGAGGCTCCTTGCCAAGTGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR CCA 90 bp GTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 2 (lower is better)
Translates to: VPAPPKAGRWRCCPLDDVGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp ACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGACCGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 2 (lower is better)
Translates to: TRGGVREGRQLASGLAVTGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...GGTCACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp TGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 2 (lower is better)
Translates to: CRPRPRQVVGGAAHWTTSGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...CGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR TCA 90 bp CCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGCGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 2 (lower is better)
Translates to: PTRGGVREGRQLASGLAVRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...CACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR GCA 90 bp CCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PAPPKAGRWRCCPLDDVGEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTGCCGGCCCCGCTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 2 (lower is better)
Translates to: PDTGRTATPPRPPACRPRWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...GCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp CAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 2 (lower is better)
Translates to: QVQGAVGRTLWTPQVSDSGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...CGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 2 (lower is better)
Translates to: IGPGRAGHSPSGATGWADAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp TGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 2 (lower is better)
Translates to: CRPRPRQVVGGAAHWTTSLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...CGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR TCA 90 bp CTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LLVLASQVSPLMVQGPAWGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...CCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATGGACCTGGGCCAGCCTaGAGAAGGGAAGAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: IGPGRAGHSPSGATGWADGPGPA*RREEAW
Trigger: CCAGGCTTCTTCCCTTCTTCAGGCTGGCCCAGGTCC...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: PGRAGHSPSGATGWADHQTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp GAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: EQVQGAVGRTLWTPQVSDSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: HSPSGATGWADHQSPSGWVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GGTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 2 (lower is better)
Translates to: GGSRYRALWAGPFGLLKSPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...AGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR GCA 90 bp CACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 2 (lower is better)
Translates to: HTGFPDTGRTATPPRPPAAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...CGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CCA 90 bp GAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: EQVQGAVGRTLWTPQVSDVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTGCCGGCCCCGCGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: PDTGRTATPPRPPACRPRAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...GCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CCA 90 bp GCCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 2 (lower is better)
Translates to: ANPGRGPGRQATGLWTGCLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...ACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LDDVGTITVLGFLPDSRSGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...GGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 2 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 2 (lower is better)
Translates to: LLVLASQVSPLMVQGPAWRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...CCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 2 (lower is better)
Translates to: AGTGRCGQDPLDSSSLRLGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...GAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGCAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 2 (lower is better)
Translates to: HSPSGATGWADHQSPSGWQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 2 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIISLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 2 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: PGRAGHSPSGATGWADHQSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 2 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACGTGTCCGACCCGTCTaGCCCCCACAAGGGGGCAGT +
Preference number: 2 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVRVRPV*PPQGGS
Trigger: ACTGCCCCCTTGTGGGGGCCAGACGGGTCGGACACG...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTGGTGTTGGCCCCAGATaGGGCACAGCCGTGTCCGAC +
Preference number: 2 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCGVGPR*GTAVSD
Trigger: GTCGGACACGGCTGTGCCCCATCTGGGGCCAACACC...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTACCAGGCCTGGGACCTaGGCCAGCCTGAAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPTRPGT*ASLKKG
Trigger: TCCCTTCTTCAGGCTGGCCCAGGTCCCAGGCCTGGT...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp CTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 2 (lower is better)
Translates to: LWAGPFGLLKSPTRLSLQPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...CTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp GGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GLLKSPTRLSLQWSHHSLGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...GAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 2 (lower is better)
Translates to: PGTCVAGVTLDGARPCVAVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp CCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: PTRGGVREGRQLASGLAVSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...CACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR GCA 90 bp CAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTT +
Preference number: 2 (lower is better)
Translates to: QVSPLMVQGPAWLFGFSPCPPGT*VAGVTL
Trigger: AAGGGTGACACCTGCGACGCAAGTACCAGGAGGACA...GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 2 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 2 (lower is better)
Translates to: GVGSCTCADHTGFPDTGRGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...TCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: LLVLASQVSPLMVQGPAWSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...CCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 2 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 2 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CAA 90 bp CACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTA +
Preference number: 2 (lower is better)
Translates to: HSGYVLLVLASQVSP*MVQGPAWLFGFSPL
Trigger: TAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp TCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SSLRLVCLFSGAITLSIHGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...GTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 2 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 2 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR GCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCGGTAAACCCCTGGGCTaGAGCCCCCAAAGGACTCAG +
Preference number: 2 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPGKPLG*SPQRTQ
Trigger: CTGAGTCCTTTGGGGGCTGCAGCCCAGGGGTTTACC...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp TCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCAAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 2 (lower is better)
Translates to: SPTGHSGYVLLVLASQVSRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...TGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 2 (lower is better)
Translates to: LWAGPFGLLKSPTRLSLQRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...CTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTAACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: GLLKSPTRLSLQWSHHSLTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...GAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 2 (lower is better)
Translates to: LWTPQVSDSSVSSVEPSLGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...GAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 2 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: HSPSGATGWADHQSPSGWHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTGGAGATGAACCTTATTaGGGGACCCGCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPGDEPY*GTRRGW
Trigger: CCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCC...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCAGAAGGGAAGAAGCCTaGAGGGCAGCGAGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: AGPFGLLKSPTRLSLQWSRREEA*RAARGL
Trigger: GAGGCCTCTCGCTGCCCTCCAGGCTTCTTCCCTTCT...GCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: HSPSGATGWADHQSPSGWAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 2 (lower is better)
Translates to: HTGFPDTGRTATPPRPPASLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...CGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp ACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGACCAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: TRGGVREGRQLASGLAVTNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...GGTCACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVDGARP*VAIRVL
Trigger: GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR GCA 90 bp CCGTTCCAGCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: PFQLFIHCWVVHQIPLVRGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...CCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CCA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 2 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp AGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 2 (lower is better)
Translates to: SLRLVCLFSGAITLSIHFGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...AAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp AAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGAATTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: KAPRAWLIPRCFERAMRNSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...ATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: HCWVVHQIPLVRQSSEGLYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...CAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525895.5
3UTR-3UTR CCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGAGATGAACCTTATTaGGGGACCCGCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVAGDEPY*GTRRGW
Trigger: CCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCC...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: SGPPFILPRLLAVLQQATVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...TGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCA +
Preference number: 2 (lower is better)
Translates to: HSPSGATGWADHQSPSGWYYQGY*LFSNRP
Trigger: TGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATA...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAACCCGGGGAGCCCCAGACCCTTCCCTaGCAGATGTGGGATGTTACA +
Preference number: 2 (lower is better)
Translates to: HPLFGNDGEVSRESQPGEPQTLP*QMWDVT
Trigger: TGTAACATCCCACATCTGCCAGGGAAGGGTCTGGGG...CTCCCCGGGTTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGAC +
Preference number: 2 (lower is better)
Translates to: DGARPCVAIRVLPLNGVAVGRTL*TPQVSD
Trigger: GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCAC...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: PGRAGHSPSGATGWADHQSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 2 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525895.5
3UTR-3UTR TCA 90 bp CTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 2 (lower is better)
Translates to: LGVGSCTCADHTGFPDTGWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...ACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAACCCGGGGAGGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 2 (lower is better)
Translates to: HPLFGNDGEVSRESQPGEVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...CTCCCCGGGTTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGTGTCCTCTGGATCCTaGCTCCCTGCCCAGTGCCGG +
Preference number: 2 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCVSSGS*LPAQCR
Trigger: CCGGCACTGGGCAGGGAGGCAGGATCCAGAGGACAC...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
3UTR-3UTR GCA 90 bp TCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 2 (lower is better)
Translates to: SEKDIKQSMASSMSTILAGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...AGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCAAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 2 (lower is better)
Translates to: LKSPTRLSLQWSHHSLHPRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...TGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp GCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 2 (lower is better)
Translates to: ALWAGPFGLLKSPTRLSLPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...AAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: PTGHSGYVLLVLASQVSPHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...GGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 2 (lower is better)
Translates to: AGSEETALKRLGGLTGYGGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTAGGGTAAACCCCTaGGCTGCAGCCCCCAAAGGA +
Preference number: 2 (lower is better)
Translates to: YQGYWLFSNRPQRLCPPGTRVNP*AAAPKG
Trigger: TCCTTTGGGGGCTGCAGCCCAGGGGTTTACCCTAGT...ACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp CCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGCGAGTTGACCAGGCCTaGGACCTGGGCCAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: PFILPRLLAVLQQATAVMRVDQA*DLGQPE
Trigger: TTCAGGCTGGCCCAGGTCCCAGGCCTGGTCAACTCG...CATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp GGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: GRTLWTPQVSDSSVSSVEAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...CTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 2 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 2 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp CTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 2 (lower is better)
Translates to: LAHPSYYQGYWLFSNRPQVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...CTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 2 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp CCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 2 (lower is better)
Translates to: PQVSDSSVSSVEPSLSPSVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...GGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 2 (lower is better)
Translates to: HSPSGATGWADHQSPSGWLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp AAGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACAATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 2 (lower is better)
Translates to: KCWGWAAVLVPITQVFQTILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...TGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp CTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LWAGPFGLLKSPTRLSLQEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...CTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCACCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 2 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp AAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: KRHQAVHGIVHEHNPGCFSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...AAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACGGAGATGAACCTTATTaGGGGACCCGCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FWPTLHITKATGCSPTGHGDEPY*GTRRGW
Trigger: CCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCC...GTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCACAGACAAGTGGTGTTaGCCCCAGATGGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: AGSEETALKRLGGLTGYGTDKWC*PQMGHS
Trigger: GCTGTGCCCCATCTGGGGCCAACACCACTTGTCTGT...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp TCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACACAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 2 (lower is better)
Translates to: SGPPFILPRLLAVLQQATQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...TGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp GTCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 2 (lower is better)
Translates to: VSKSPFLPTVRKHLQKARILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...ACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR TCA 90 bp GGTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: GGSRYRALWAGPFGLLKSGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...AGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 2 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR GCA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGAGAGCAGGGCCTCCATaGCCACTCTTAACACTAGGG +
Preference number: 2 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRRAGPP*PLLTLG
Trigger: CCCTAGTGTTAAGAGTGGGCATGGAGGCCCTGCTCT...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR GCA 90 bp TCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SGKAPRAWLIPRCFERAMEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...CATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTAGTGAAATCATCTTCTaGCCCACCCTTCATATTACC +
Preference number: 2 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGSEIIF*PTLHIT
Trigger: GGTAATATGAAGGGTGGGCCAGAAGATGATTTCACT...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTGATGTTACAGACAAGTaGTGTTGGCCCCAGATGGGG +
Preference number: 2 (lower is better)
Translates to: YQGYWLFSNRPQRLCPPGDVTDK*CWPQMG
Trigger: CCCCATCTGGGGCCAACACCACTTGTCTGTAACATC...ACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp GTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATCTTCCCTGGCAGATGTaGGATGTTACAGACAAGTGG +
Preference number: 2 (lower is better)
Translates to: VTLDGARPCVAIRVLPLNLPWQM*DVTDKW
Trigger: CCACTTGTCTGTAACATCCCACATCTGCCAGGGAAG...ATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CCA 90 bp GCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCCACTGGTATGAAAATTaGTCGGGTGAAGAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: AVLPTGRRRHNHCVGVLAHWYEN*SGEESK
Trigger: TTTGCTCTCTTCACCCGACCAATTTTCATACCAGTG...GGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR-3UTR TCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 2 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp AGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTGTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 2 (lower is better)
Translates to: RHQAVHGIVHEHNPGCFLWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...CAGAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp AGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 2 (lower is better)
Translates to: SLRLVCLFSGAITLSIHFILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...AAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR GCA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGTGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTT +
Preference number: 2 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRCPPGT*VAGVTL
Trigger: AAGGGTGACACCTGCGACGCAAGTACCAGGAGGACA...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR GCA 90 bp TCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 2 (lower is better)
Translates to: SSLRLVCLFSGAITLSIHGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...GTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: LSGKAPRAWLIPRCFERAHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...GGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTTATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCA +
Preference number: 2 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSYYQGY*LFSNRP
Trigger: TGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATA...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQRLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp GCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: ALHPLLGRASDPPCQAKLRLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...GAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp TCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCAGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: SCIRSPLSGKAPRAWLIPAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...TGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CCA 90 bp GCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACACCAAAGGAGCTTCACTaGTATGAAAATTGGTCGGGT +
Preference number: 2 (lower is better)
Translates to: AAHWTTSAQSLCWGSCLTPKELH*YENWSG
Trigger: ACCCGACCAATTTTCATACCAGTGAAGCTCCTTTGG...TGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR-3UTR TCA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp GAGCACAATCCTGGCTGCTTTCTGAGTGAGCTCCAGCGGGAAATCAGGACACAGAACCTGAGGTACCACTaGAGTAGGTCACACAGTTCA +
Preference number: 2 (lower is better)
Translates to: EHNPGCFLSELQREIRTQNLRYH*SRSHSS
Trigger: TGAACTGTGTGACCTACTTCAGTGGTACCTCAGGTT...CTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525279.5
3UTR-3UTR GCA 90 bp AGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTGGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: RHQAVHGIVHEHNPGCFLEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...CAGAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 2 (lower is better)
Translates to: LVCLFSGAITLSIHFSGMPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...CATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp ACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: TCADHTGFPDTGRTATPPHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...TGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp CACTCTCTCCATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAAAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: HSLHPLFGNDGEVSRESQKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...TTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp GTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: VCLFSGAITLSIHFSGMMSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...CATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp AGCTTTTCCAGGGTGGGAGGCATCCAGTTACACCATTTTGACCAAAGGAGCTTCGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 2 (lower is better)
Translates to: SFSRVGGIQLHHFDQRSFVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...GAAGCTCCTTTGGTCAAAATGGTGTAACTGGATGCCTCCCACCCTGGAAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR-3UTR TCA 90 bp CTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACCAGTTACACCATTTTaGCCAAAGGAGCTTCACTGG +
Preference number: 2 (lower is better)
Translates to: LKSPTRLSLQWSHHSLHPPVTPF*PKELHW
Trigger: CCAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGG...TGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR-3UTR GCA 90 bp CCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGGGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PQFGSISRRPVKMIPYCGEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...CCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR CCA 90 bp GTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 2 (lower is better)
Translates to: VCLFSGAITLSIHFSGMMPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...CATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CCA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACATCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: IIFWPTLHITKATGCSPTSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 2 (lower is better)
Translates to: SANRHFCPQFGSISRRPVNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...TACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR TCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: AGSEETALKRLGGLTGYGSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CCA 90 bp TTTCCAGGGTGGGAGGCATCCAGTTACACCATTTTGACCAAAGGAGCTTCACTGAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 2 (lower is better)
Translates to: FPGWEASSYTILTKGASLNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...CAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGGATGCCTCCCACCCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532633.5
3UTR-3UTR TCA 90 bp CAGCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: QLFIHCWVVHQIPLVRQSNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...GCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp TCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: SPTRLSLQWSHHSLHPLFGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...GAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR TCA 90 bp CCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 2 (lower is better)
Translates to: PTVRKHLQKARKNDTLLWWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...CCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
3UTR-3UTR TCA 90 bp GCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAATGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 2 (lower is better)
Translates to: ANRHFCPQFGSISRRPVKWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...TTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR TCA 90 bp TCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATCCAGTTACACCATTTTaGCCAAAGGAGCTTCACTGG +
Preference number: 2 (lower is better)
Translates to: SPFLPTVRKHLQKARKNDPVTPF*PKELHW
Trigger: CCAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGG...ATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532633.5
3UTR-3UTR GCA 90 bp TCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAGGAGCCTCAAGAGTaGTGGTACAGATTAAATGGT +
Preference number: 2 (lower is better)
Translates to: SANRHFCPQFGSISRRPVKEPQE*WYRLNG
Trigger: ACCATTTAATCTGTACCAGCACTCTTGAGGCTCCTT...TACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR TCA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 2 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR TCA 90 bp TCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 2 (lower is better)
Translates to: SPFLPTVRKHLQKARKNDWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...ATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000525279.5
ENST00000527667.5
ENST00000532633.5
3UTR-3UTR TCA 90 bp GCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAAATGGTATAGAAACTTaGCCCGTAGGCTTGTCAGTT +
Preference number: 2 (lower is better)
Translates to: ANRHFCPQFGSISRRPVKNGIET*PVGLSV
Trigger: AACTGACAAGCCTACGGGTCAAGTTTCTATACCATT...TTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR CCA 90 bp TTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGCCAAAGGAGCTTCACTaGTATGAAAATTGGTCGGGT +
Preference number: 2 (lower is better)
Translates to: LPTVRKHLQKARKNDTLLPKELH*YENWSG
Trigger: ACCCGACCAATTTTCATACCAGTGAAGCTCCTTTGG...CAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532633.5
3UTR-3UTR CCA 90 bp CCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCGAGTCATATTTCACTTaGCAAGGAGCCTCAAGAGTG +
Preference number: 2 (lower is better)
Translates to: PFLPTVRKHLQKARKNDTESYFT*QGASRV
Trigger: CACTCTTGAGGCTCCTTGCCAAGTGAAATATGACTC...GGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR CCA 90 bp CCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGGGAGCCTCAAGAGTGCTaGTACAGATTAAATGGTATA +
Preference number: 2 (lower is better)
Translates to: PQFGSISRRPVKMIPYCGEPQEC*YRLNGI
Trigger: TATACCATTTAATCTGTACCAGCACTCTTGAGGCTC...CCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR TCA 90 bp TCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: SFMVSKSPFLPTVRKHLQNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...CTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR GCA 90 bp AAGGAGCTTCACTGGTATGAAAATTGGTCGGGTGAAGAGAGCAAACAAGAGAGGAAAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 2 (lower is better)
Translates to: KELHWYENWSGEESKQERKNRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTTT...CCTCTCTTGTTTGCTCTCTTCACCCGACCAATTTTCATACCAGTGAAGCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532633.5
3UTR-3UTR TCA 90 bp CTACAAAGCTTTTCCAGGGTGGGAGGCATCCAGTTACACCATTTTGACCAAAGGTCTAACCTCCAGGTGTaGGATTTTAAGATCAGTATT +
Preference number: 2 (lower is better)
Translates to: LQSFSRVGGIQLHHFDQRSNLQV*DFKISI
Trigger: AATACTGATCTTAAAATCTCACACCTGGAGGTTAGA...CCTTTGGTCAAAATGGTGTAACTGGATGCCTCCCACCCTGGAAAAGCTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528488.5
ENST00000532633.5
3UTR-3UTR CCA 90 bp GGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTCTGGTACAGATTAAATaGTATAGAAACTTGACCCGT +
Preference number: 2 (lower is better)
Translates to: GLDEAEFSKENVCSLAYTLVQIK*YRNLTR
Trigger: ACGGGTCAAGTTTCTATACCATTTAATCTGTACCAG...AGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR CCA 90 bp TTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTAAGAATGTGTGTTCCCTaGCATACACTGTTAAAACAT +
Preference number: 2 (lower is better)
Translates to: FLPTVRKHLQKARKNDTLRMCVP*HTLLKH
Trigger: ATGTTTTAACAGTGTATGCCAGGGAACACACATTCT...TAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525279.5
3UTR-3UTR CCA 90 bp TCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 2 (lower is better)
Translates to: SEKDIKQSMASSMSTILASDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...AGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525279.5
3UTR-3UTR TCA 90 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAAAAAACATGTAGAACCTaGGGTACCACTGAAGTAGGT +
Preference number: 2 (lower is better)
Translates to: TKLNSRKRMCVPWHTLLKKTCRT*GTTEVG
Trigger: ACCTACTTCAGTGGTACCTCAGGTTCTACATGTTTT...TTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525279.5
3UTR-3UTR GCA 90 bp AATCAGGACACAGTAATTGCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATGCAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 2 (lower is better)
Translates to: NQDTVIAANSDILSWSANANRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC...ATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR CCA 90 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAACACTGGTATGAAAATTaGTCGGGTGAAGAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: TKLNSRKRMCVPWHTLLKHWYEN*SGEESK
Trigger: TTTGCTCTCTTCACCCGACCAATTTTCATACCAGTG...TTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532633.5
3UTR-3UTR TCA 90 bp ATGTGTGTTCCCTGGCATACACTGTTAAAACCCCAGAAGAGTCATATTTCACTTAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: MCVPWHTLLKPQKSHISLNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...AAGTGAAATATGACTCTTCTGGGGTTTTAACAGTGTATGCCAGGGAACACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR-3UTR CCA 90 bp GCGGGAAATCAGGACACAGTAATTGCAGCAAACAGTGATATTCTTTCATGGTCAAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 2 (lower is better)
Translates to: AGNQDTVIAANSDILSWSSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...TGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR CAA 90 bp CCACGCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 3 (lower is better)
Translates to: PRPPACRPRPRQVVGGAALAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...GGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR CCA 72 bp CCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGACGACGTCGGCACAATC +
Preference number: 3 (lower is better)
Translates to: PSSVPAPPKAGR*RCCPLDDVGTI
Trigger: GATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR GCA 72 bp ACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTaGCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCT +
Preference number: 3 (lower is better)
Translates to: TGRTATPPRPPA*RPRPRQVVGGA
Trigger: AGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR GCA 72 bp AGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTCGGCACAATCACTGTG +
Preference number: 3 (lower is better)
Translates to: SVPAPPKAGRWR*CPLDDVGTITV
Trigger: CACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR GCA 72 bp GTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGCACAATCACTGTGTTG +
Preference number: 3 (lower is better)
Translates to: VPAPPKAGRWRC*PLDDVGTITVL
Trigger: CAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 72 bp GGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCCTCTGGCTGGTCTTGG +
Preference number: 3 (lower is better)
Translates to: GRAGHSPSGATG*ADHQSPSGWSW
Trigger: CCAAGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR CCA 72 bp CCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCACTGTGTTGGGGTTCT +
Preference number: 3 (lower is better)
Translates to: PRPRQVVGGAAH*TTSAQSLCWGS
Trigger: AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CAA 90 bp GCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 3 (lower is better)
Translates to: AGTGRCGQDPLDSSSLRLLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...GAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp CCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 3 (lower is better)
Translates to: PTRGGVREGRQLASGLAVGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...CACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR TCA 72 bp AAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTaGAGCAGTGTCCTCTGGATCCTGCCTCCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: KPLQGLAPCWSE*SSVLWILPPCP
Trigger: TGGGCAGGGAGGCAGGATCCAGAGGACACTGCTTCACTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378618.6
3UTR CCA 72 bp CACCAAGGGCTGGGTGGGAGCAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACT +
Preference number: 3 (lower is better)
Translates to: HQGLGGSRYRAL*AGPFGLLKSPT
Trigger: AGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp GCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 3 (lower is better)
Translates to: ALWAGPFGLLKSPTRLSLAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...AAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp TGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 3 (lower is better)
Translates to: CWVVHQIPLVRQSSEGLVAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...AACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CAA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 3 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: HSPSGATGWADHQSPSGWAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 3 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp GTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 3 (lower is better)
Translates to: VTLDGARPCVAIRVLPLNLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...ATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp GCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 3 (lower is better)
Translates to: AGTGRCGQDPLDSSSLRLCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...GAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 3 (lower is better)
Translates to: HSPSGATGWADHQSPSGWQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
3UTR CCA 72 bp GCCTCCATGCCCACTCTTAACACTAGGGTAAACCCCTaGGCTGCAGCCCCCAAAGGACTCAGAGGGAGGGAC +
Preference number: 3 (lower is better)
Translates to: ASMPTLNTRVNP*AAAPKGLRGRD
Trigger: GTCCCTCCCTCTGAGTCCTTTGGGGGCTGCAGCCCAGGGGTTTACCCTAGTGTTAAGAGTGGGCATGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR-3UTR CAA 90 bp CACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 3 (lower is better)
Translates to: HTGFPDTGRTATPPRPPAPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...CGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp CAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: QVSPLMVQGPAWLFGFSPTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525895.5
3UTR-3UTR CAA 90 bp ACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 3 (lower is better)
Translates to: TGRCGQDPLDSSSLRLVCCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...ACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR GCA 72 bp TCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: SNRPQRLCPPGT*VAGVTLDGARP
Trigger: GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR GCA 72 bp GACCTGGGCCAGCAGCCGTTCCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAA +
Preference number: 3 (lower is better)
Translates to: DLGQQPFQLFIH*WVVHQIPLVRQ
Trigger: TTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGCTGGCCCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR CCA 72 bp ACCCTTCCCTGGCAGATGTGGGATGTTACAGACAAGTaGTGTTGGCCCCAGATGGGGCACAGCCGTGTCCGA +
Preference number: 3 (lower is better)
Translates to: TLPWQMWDVTDK*CWPQMGHSRVR
Trigger: TCGGACACGGCTGTGCCCCATCTGGGGCCAACACCACTTGTCTGTAACATCCCACATCTGCCAGGGAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR CCA 72 bp TGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCA +
Preference number: 3 (lower is better)
Translates to: WEQVQGAVGRTL*TPQVSDSSVSS
Trigger: TGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp ACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 3 (lower is better)
Translates to: TGRCGQDPLDSSSLRLVCGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...ACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 3 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR TCA 72 bp ATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCT +
Preference number: 3 (lower is better)
Translates to: MSSWYLRRRCHP*WCKALRGYSGS
Trigger: AGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR TCA 72 bp GTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGAGAGCCAACCCGGGGA +
Preference number: 3 (lower is better)
Translates to: VEPSLSPSTFRE*WRGLQGEPTRG
Trigger: TCCCCGGGTTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR GCA 72 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTT +
Preference number: 3 (lower is better)
Translates to: CVAGVTLDGARP*VAIRVLPLNGV
Trigger: AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CCA 72 bp GGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCACAGGCTGATAGGGCCA +
Preference number: 3 (lower is better)
Translates to: GVTRWPQHSLSA*GLSEVHRLIGP
Trigger: TGGCCCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
3UTR CCA 72 bp TCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTG +
Preference number: 3 (lower is better)
Translates to: SQVSPLMVQGPA*LFGFSPLMELL
Trigger: CAGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CCA 72 bp GCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCAGGTCCTCATAGATGG +
Preference number: 3 (lower is better)
Translates to: AAHWTTSAQSLC*GSCLTAGPHRW
Trigger: CCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CAA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRSQVSP*MVQGPA
Trigger: CGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 3 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTATGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 3 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp GTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: VHQIPLVRQSSEGLVDSTTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...CGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 72 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCAGCTTGGGGCCTAAGT +
Preference number: 3 (lower is better)
Translates to: RLGGLTGYGVTR*PQHSLSAWGLS
Trigger: ACTTAGGCCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp TCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACATGTCCTCCTGGTACTaGCGTCGCAGGTGTCACCCT +
Preference number: 3 (lower is better)
Translates to: SSLRLVCLFSGAITLSIHMSSWY*RRRCHP
Trigger: AGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT...GTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp GGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 3 (lower is better)
Translates to: GVGSCTCADHTGFPDTGRGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...TCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR-3UTR CAA 90 bp CTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 3 (lower is better)
Translates to: LRLVCLFSGAITLSIHFSCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...CGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR TCA 72 bp TGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGGGGGACCCGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: WLFGFSPLMELL*GDEPYWGTRRG
Trigger: GCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCATTAAGGGGGAGAACCCGAATAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR GCA 72 bp TACTCCAGCCTAGGCAAGAGTGAGACCCGCCATTTTTaGCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTA +
Preference number: 3 (lower is better)
Translates to: YSSLGKSETRHF*PQFGSISRRPV
Trigger: TACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGGGTCTCACTCTTGCCTAGGCTGGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526424.5
3UTR-3UTR CAA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACATCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: IIFWPTLHITKATGCSPTSQVSP*MVQGPA
Trigger: CGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGATGTCCTCCTGGTACTaGCGTCGCAGGTGTCACCCT +
Preference number: 3 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRMSSWY*RRRCHP
Trigger: AGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp CACTCTCTCCATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAAGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 3 (lower is better)
Translates to: HSLHPLFGNDGEVSRESQGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...TTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 3 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp AAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGAATGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: KAPRAWLIPRCFERAMRNAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...ATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 72 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCT +
Preference number: 3 (lower is better)
Translates to: HLLAHPSYYQGY*LFSNRPQRLCP
Trigger: AGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp GTGAAATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 3 (lower is better)
Translates to: VKSSSGPPFILPRLLAVLPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...GAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp AAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 3 (lower is better)
Translates to: KRHQAVHGIVHEHNPGCFPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...AAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGCAAAGGGGTCAAGACTaGAAGCAGTTTTTGCAAGTG +
Preference number: 3 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVQRGQD*KQFLQV
Trigger: CACTTGCAAAAACTGCTTCAAGTCTTGACCCCTTTG...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTCAAAGGGGTCAAGACTaGAAGCAGTTTTTGCAAGTG +
Preference number: 3 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVQRGQD*KQFLQV
Trigger: CACTTGCAAAAACTGCTTCAAGTCTTGACCCCTTTG...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR-3UTR CAA 90 bp TCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: SEKDIKQSMASSMSTILATVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...AGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR-3UTR CAA 90 bp TTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCTCCAGTTACACCATTTaGACCAAAGGAGCTTCACTG +
Preference number: 3 (lower is better)
Translates to: LSGKAPRAWLIPRCFERASSYTI*TKGASL
Trigger: CAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGGA...GGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR TCA 72 bp CAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCCATAGAAGGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: QSSEGLVDSTVL*ESHEESIEGQS
Trigger: AGACTGACCTTCTATGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
3UTR CCA 72 bp CATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAGCTGAATTCTCGAAAG +
Preference number: 3 (lower is better)
Translates to: HLQKARKNDTLL*GVAWTKLNSRK
Trigger: CTTTCGAGAATTCAGCTTCGTCCAAGCCACCCCCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
3UTR-3UTR CAA 90 bp TTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGGAGTTCAAGACCAGTTaGAGCAATAAAATGAGACCC +
Preference number: 3 (lower is better)
Translates to: LPTVRKHLQKARKNDTLLEFKTS*SNKMRP
Trigger: GGGTCTCATTTTATTGCTCAAACTGGTCTTGAACTC...CAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532633.5
3UTR CCA 72 bp AGACTTGAAGCAGTTTTTGCAAGTGAAATCATCTTCTaGCCCACCCTTCATATTACCAAGGCTACTGGCTGT +
Preference number: 3 (lower is better)
Translates to: RLEAVFASEIIF*PTLHITKATGC
Trigger: ACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCTTCAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR TCA 72 bp AGCGGGAAATCAGGACACAGTAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGCAAATCTGGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: SGKSGHSNCSKQ*YSFMVSKSGLG
Trigger: ACCAAGACCAGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR CCA 72 bp GACACAGTAATTGCAGCAAACAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTTTGCCCACAGTTCGGA +
Preference number: 3 (lower is better)
Translates to: DTVIAANSDILS*SANRHFCPQFG
Trigger: TCCGAACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR-3UTR CAA 90 bp GAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAACCAAATGGTATAGAAACTaGACCCGTAGGCTTGTCAGT +
Preference number: 3 (lower is better)
Translates to: EAEFSKENVCSLAYTVKTKWYRN*TRRLVS
Trigger: ACTGACAAGCCTACGGGTCAAGTTTCTATACCATTT...GGTTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR TCA 72 bp AGCGGGAAATCAGGACACAGTAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGCAAATCGCCATTTTTG +
Preference number: 3 (lower is better)
Translates to: SGKSGHSNCSKQ*YSFMVSKSPFL
Trigger: CAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
3UTR CCA 72 bp TACACTGTTAAAACCCCAGAAGAGTCATATTTCACTTaGCAAGGAGCCTCAAGAGTGCTGGTACAGATTAAA +
Preference number: 3 (lower is better)
Translates to: YTVKTPEESYFT*QGASRVLVQIK
Trigger: TTTAATCTGTACCAGCACTCTTGAGGCTCCTTGCCAAGTGAAATATGACTCTTCTGGGGTTTTAACAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR CCA 72 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTaGCATACACTGTTAAAACCCCAGAAGAGTCATATT +
Preference number: 3 (lower is better)
Translates to: TKLNSRKRMCVP*HTLLKPQKSHI
Trigger: AATATGACTCTTCTGGGGTTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527667.5
3UTR CCA 72 bp GACACAGTAATTGCAGCAAACAGTGATATTCTTTCATaGTCAGCAAATCTGGTCTTGGTAGAGCTGTTCTTT +
Preference number: 3 (lower is better)
Translates to: DTVIAANSDILS*SANLVLVELFF
Trigger: AAAGAACAGCTCTACCAAGACCAGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
3UTR CAA 72 bp GCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGACGACGTCGGCACAAT +
Preference number: 4 (lower is better)
Translates to: ALQRAGPAQGRS*AVLPTGRRRHN
Trigger: ATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp GGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: GPAQGRSLAVLPTGRRRHAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...GTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp CCACGCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCGGAGATGAACCTTATTaGGGGACCCGCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRPPACRPRPRQVVGGAAGDEPY*GTRRGW
Trigger: CCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCC...GGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525895.5
CDS-3UTR GCA 90 bp CCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGTTCCGGAACCCAGGTTaGCGTCTCTCTCCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PSSVPAPPKAGRWRCCPLFRNPG*RLSPLP
Trigger: TGGCAACGGAGAGAGACGGCAACCTGGGTTCCGGAA...CAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR TCA 90 bp CCACGCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PRPPACRPRPRQVVGGAADSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...GGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp CCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PAPPKAGRWRCCPLDDVGLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VPAPPKAGRWRCCPLDDVILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: PAPPKAGRWRCCPLDDVGVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: GPAQGRSLAVLPTGRRRHDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...GTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp GTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCAATCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VPAPPKAGRWRCCPLDDVNLAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGATT...GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534249.5
CDS-3UTR GCA 90 bp ACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGACCGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TRGGVREGRQLASGLAVTGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...GGTCACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCTCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: SPSGATGWADHQSPSGWSPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...AGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCTGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: SPSGATGWADHQSPSGWSGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...AGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTGCCGGCCCCGCTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PDTGRTATPPRPPACRPRSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...GCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HSPSGATGWADHQSPSGWSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGAAGCAGTGTCCTCTGGATCCTGCCCCAGTGCCGGCCCCTaGCCTCACTCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CRAWLPVGLSEAVSSGSCPSAGP*PHSLGS
Trigger: GGAGCCCAGAGAGTGAGGCCAGGGGCCGGCACTGGG...GCAGGATCCAGAGGACACTGCTTCACTCAGACCAACAGGGAGCCAGGCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATGGTGTTGGCCCCAGATaGGGCACAGCCGTGTCCGAC +
Preference number: 4 (lower is better)
Translates to: IGPGRAGHSPSGATGWADGVGPR*GTAVSD
Trigger: GTCGGACACGGCTGTGCCCCATCTGGGGCCAACACC...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR GCA 90 bp ACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTGCGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: TGFPDTGRTATPPRPPACGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...GCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: VGGAAHWTTSAQSLCWGSGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp CAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: QVQGAVGRTLWTPQVSDSPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...CGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTACCAGGCCTGGGACCTaGGCCAGCAGCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RCCPLDDVGTITVLGFLPTRPGT*ASSRSS
Trigger: GCTGGAACGGCTGCTGGCCCAGGTCCCAGGCCTGGT...AGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGTGCACCAGGCCTGGGACCTaGGCCAGCAGCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGFPDTGRTATPPRPPACTRPGT*ASSRSS
Trigger: GCTGGAACGGCTGCTGGCCCAGGTCCCAGGCCTGGT...GCACGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: IGPGRAGHSPSGATGWADTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: AGTGRCGQDPLDSSSLRLGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...GAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGRWRCCPLDDVGTITVLSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...CAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGCGAGTTGACCAGGCCTaGGACCTGGGCCAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: HSPSGATGWADHQSPSGWRVDQA*DLGQPE
Trigger: TTCAGGCTGGCCCAGGTCCCAGGCCTGGTCAACTCG...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp GCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCCTCTCTCCGTTGCCATaGCACCCACGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AVLPTGRRRHNHCVGVLALSPLP*HPRGGR
Trigger: CCTTCCGCCGCGTGGGTGCCATGGCAACGGAGAGAG...GGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR TCA 90 bp CCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: PTRGGVREGRQLASGLAVVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...CACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp TGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: CWVVHQIPLVRQSSEGLVGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...AACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: AGVTLDGARPCVAIRVLPGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...GGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: QVVGGAAHWTTSAQSLCWGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...CCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGACCAGGCCTGGGACCTaGGCCAGCAGCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGTRPGT*ASSRSS
Trigger: GCTGGAACGGCTGCTGGCCCAGGTCCCAGGCCTGGT...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278460.12
ENST00000525895.5
CDS-3UTR CCA 90 bp GTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VVGGAAHWTTSAQSLCWGTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...ACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACGCCCTCCAGCGGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: HTGFPDTGRTATPPRPPAGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...CGCTGGAGGGCGTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGACCCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: TRGGVREGRQLASGLAVTPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...GGTCACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGRCGQDPLDSSSLRLVCSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...ACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTCGAGTTGACCAGGCCTaGGACCTGGGCCAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGTCVAGVTLDGARPCVARVDQA*DLGQPE
Trigger: TTCAGGCTGGCCCAGGTCCCAGGCCTGGTCAACTCG...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378615.7
ENST00000395460.6
CDS-3UTR TCA 90 bp TGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CCPLDDVGTITVLGFLPDGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...GTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLGRASDPPCQAKLRGLGGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...ACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCCGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PTGHSGYVLLVLASQVSPRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...GGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: AHWTTSAQSLCWGSCLTAAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp TGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGAAGCAGTGTCCTCTGGATCCTGCTGCCGTGAGGTCCGGTaGAGCTTCGACCTCACCACC +
Preference number: 4 (lower is better)
Translates to: CRAWLPVGLSEAVSSGSCCREVR*SFDLTT
Trigger: GGTGGTGAGGTCGAAGCTGCACCGGACCTCACGGCA...GCAGGATCCAGAGGACACTGCTTCACTCAGACCAACAGGGAGCCAGGCCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGCCTCCCTGCCCAGTaGCGGCCCCTGGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSECLPAQ*RPLASL
Trigger: GAGTGAGGCCAGGGGCCGGCACTGGGCAGGGAGGCA...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GCCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: ANPGRGPGRQATGLWTGCNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...ACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGACCAGGCCTGGGACCTaGGCCAGCAGCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRTLWTPQVSDSSVSSVETRPGT*ASSRSS
Trigger: GCTGGAACGGCTGCTGGCCCAGGTCCCAGGCCTGGT...CTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: IGPGRAGHSPSGATGWADQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PTRGGVREGRQLASGLAVRLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...CACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp AGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RQLASGLAVTELTRPGTWVGRTL*TPQVSD
Trigger: GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCAC...CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GGTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: GGSRYRALWAGPFGLLKSRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...AGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HCWVVHQIPLVRQSSEGLSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...CAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GVTLDGARPCVAIRVLPLVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...AAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGGGACTCAGCATCCTTTaGCCGGGGTGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LLVLASQVSPLMVQGPAWGLSIL*PGWLQS
Trigger: GCTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCC...CCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGRAGHSPSGATGWADHQLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGARPCVAIRVLPLNGVAGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKAPRAWLIPRCFERAMRGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...CCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: QATGLWTGCDRVDQAWDLVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...CAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GCCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGCAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: ANPGRGPGRQATGLWTGCANRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC...ACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: DGARPCVAIRVLPLNGVAAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp CTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: LWAGPFGLLKSPTRLSLQAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...CTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp GGTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: GGSRYRALWAGPFGLLKSDGARP*VAIRVL
Trigger: GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC...AGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGTGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: QATGLWTGCDRVDQAWDLCPPGT*VAGVTL
Trigger: AAGGGTGACACCTGCGACGCAAGTACCAGGAGGACA...CAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATAGAGCAGGGCCTCCATaGCCACTCTTAACACTAGGG +
Preference number: 4 (lower is better)
Translates to: IGPGRAGHSPSGATGWADRAGPP*PLLTLG
Trigger: CCCTAGTGTTAAGAGTGGGCATGGAGGCCCTGCTCT...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR CCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HSPSGATGWADHQSPSGWAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QATGLWTGCDRVDQAWDLAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...CAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: ALWAGPFGLLKSPTRLSLGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...AAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: GSCIRSPLSGKAPRAWLIPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...AATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCATCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
3UTR CAA 72 bp GAGCCCCTCTGGCTGGTCTTGGGGCTGTTATTCACCTaGTCAGCAGCAGAGGGCAGCACAGCAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EPLWLVLGLLFT*SAAEGSTARCW
Trigger: CCAGCACCTTGCTGTGCTGCCCTCTGCTGCTGACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR CAA 72 bp GTGGGAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VGAGTGRCGQDP*DSSSLRLVCLF
Trigger: GAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
3UTR CAA 72 bp GGACCTGGGCCAGCAGCCGTTCCAGCTCTTCATCCATaGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGPAAVPALHP*LGRASDPPCQA
Trigger: TGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGCTGGCCCAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTGGACTCAGCATCCTTTaGCCGGGGTGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVGLSIL*PGWLQS
Trigger: GCTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCC...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: AGVTLDGARPCVAIRVLPWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...GGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: PGRAGHSPSGATGWADHQVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCTGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: SPSGATGWADHQSPSGWSDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...AGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QVSPLMVQGPAWLFGFSPLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGTCVAGVTLDGARPCVALRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGCGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGGGCTCTGTGCTGCCGTaGGGTCCGGTGCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSEGSVLP*GPVQLR
Trigger: TCGAAGCTGCACCGGACCTCACGGCAGCACAGAGCC...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: IGPGRAGHSPSGATGWADGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR GCA 90 bp AGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RQLASGLAVTELTRPGTWGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: EQVQGAVGRTLWTPQVSDCPPGT*VAGVTL
Trigger: AAGGGTGACACCTGCGACGCAAGTACCAGGAGGACA...GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVAGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp AGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: RQLASGLAVTELTRPGTWLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: QATGLWTGCDRVDQAWDLLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...CAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTCAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: VGGAAHWTTSAQSLCWGSQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GVTLDGARPCVAIRVLPLVGRTL*TPQVSD
Trigger: GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCAC...AAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: VGGAAHWTTSAQSLCWGSVGRTL*TPQVSD
Trigger: GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCAC...AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LGVGSCTCADHTGFPDTGTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...ACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp AGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RQLASGLAVTELTRPGTWPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTTCCGGGGCCACTGGCTaGGCTGATCATCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVSGATG*ADHQSP
Trigger: GGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGA...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCCGTGTCCGACCCGTCTaGCCCCCACAAGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGRVRPV*PPQGGS
Trigger: ACTGCCCCCTTGTGGGGGCCAGACGGGTCGGACACG...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR TCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGGGACTCAGCATCCTTTaGCCGGGGTGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGGLSIL*PGWLQS
Trigger: GCTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCC...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR TCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: VGGAAHWTTSAQSLCWGSWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp GCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: AGVTLDGARPCVAIRVLPVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...GGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EQVQGAVGRTLWTPQVSDSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp AGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAACGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SGYVLLVLASQVSPLMVQRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...TTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGACGCAGGTGTCACCCTTaGTGGTGCAAGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GVGSCTCADHTGFPDTGRRRCHP*WCKALR
Trigger: ACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCG...TCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525895.5
CDS-3UTR TCA 90 bp TACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTGGACCTGGGCCAGCCTaGAGAAGGGAAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YQGYWLFSNRPQRLCPPGGPGPA*RREEAW
Trigger: CCAGGCTTCTTCCCTTCTTCAGGCTGGCCCAGGTCC...ACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR GCA 90 bp CTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLVLASQVSPLMVQGPAWEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...CCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EQVQGAVGRTLWTPQVSDEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp ACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCAGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: TCADHTGFPDTGRTATPPAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...TGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp TGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CCPLDDVGTITVLGFLPDGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...GTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp GCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGTCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGRWRCCPLDDVGTITVLSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...CAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPDGARP*VAIRVL
Trigger: GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTTGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVCPPGT*VAGVTL
Trigger: AAGGGTGACACCTGCGACGCAAGTACCAGGAGGACA...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGGGTAAACCCCTGGGCTaGAGCCCCCAAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLGKPLG*SPQRTQ
Trigger: CTGAGTCCTTTGGGGGCTGCAGCCCAGGGGTTTACC...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR CCA 90 bp CTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LKSPTRLSLQWSHHSLHPPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...TGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: AGPFGLLKSPTRLSLQWSDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...GCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: VVGGAAHWTTSAQSLCWGLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...ACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp CCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTCAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: PLLGRASDPPCQAKLRGLQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...AAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GAGCACAATCCTGGCTGCTTTCTGAGTGAGCTCCAGCGGGAAATCAGGACACAGACACCAAGGGCTGGGTaGGAGCAGGTACAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: EHNPGCFLSELQREIRTQTPRAG*EQVQGA
Trigger: AGCGCCCTGTACCTGCTCCCACCCAGCCCTTGGTGT...CTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: TGRCGQDPLDSSSLRLVCSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...ACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GVTLDGARPCVAIRVLPLYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...AAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GAGCACAATCCTGGCTGCTTTCTGAGTGAGCTCCAGCGGGAAATCAGGACACAGGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: EHNPGCFLSELQREIRTQVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...CTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525895.5
CDS-3UTR CCA 90 bp GAGCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACGATGTTACAGACAAGTaGTGTTGGCCCCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: EQVQGAVGRTLWTPQVSDDVTDK*CWPQMG
Trigger: CCCCATCTGGGGCCAACACCACTTGTCTGTAACATC...GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR TCA 90 bp CCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTCATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLLGRASDPPCQAKLRGLHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...AAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCACATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AHWTTSAQSLCWGSCLTAHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PLLGRASDPPCQAKLRGLLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...AAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp CCTGAAGAAGGGAAGAAGCCTGGAGGGCAGCGAGAGGCCTCCTGTACAGAGAGCAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: PEEGKKPGGQREASCTESSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...GCTCTCTGTACAGGAGGCCTCTCGCTGCCCTCCAGGCTTCTTCCCTTCTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR GCA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGGCAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: HSPSGATGWADHQSPSGWANRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVTLDGARPCVAIRVLPLEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...AAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGTCGTTGGCGGTGCTaGCCACTGGACGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLGRWRC*PLDDVG
Trigger: GCCGACGTCGTCCAGTGGGCAGCACCGCCAACGACC...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VGGAAHWTTSAQSLCWGSSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPDGARP*VAIRVL
Trigger: GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGGCTCCTTGGCTCTGTaGTGCCGTGAGGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWGSLAL*CREVRC
Trigger: GCACCGGACCTCACGGCAGCACAGAGCCAAGGAGCC...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGTGTCCTCTGGATCCTaGCTCCCTGCCCAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWVSSGS*LPAQCR
Trigger: CCGGCACTGGGCAGGGAGGCAGGATCCAGAGGACAC...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTCTGTTTTCTAGCAGCTaGCACACTGCATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PGTCVAGVTLDGARPCVALFSSS*HTASSM
Trigger: CATGGAGGATGCAGTGTGCCAGCTGCTAGAAAACAG...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CPLDDVGTITVLGFLPDSAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAHWTTSAQSLCWGSCLTAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...TGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: AGVTLDGARPCVAIRVLPAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...GGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: IFWPTLHITKATGCSPTGPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...GCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: SGKAPRAWLIPRCFERAMDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...CATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CCTGAAGAAGGGAAGAAGCCTGGAGGGCAGCGAGAGGCCTCCTGTACAGAGAGCCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: PEEGKKPGGQREASCTESLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...GCTCTCTGTACAGGAGGCCTCTCGCTGCCCTCCAGGCTTCTTCCCTTCTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR CCA 90 bp CGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: RCCPLDDVGTITVLGFLPLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...AGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCCAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVAVGRTL*TPQVSD
Trigger: GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCAC...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp AGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGYVLLVLASQVSPLMVQGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...TTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PQVSDSSVSSVEPSLSPSGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...GGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGGAGATGAACCTTATTaGGGGACCCGCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSGDEPY*GTRRGW
Trigger: CCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCC...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTGGAGATGAACCTTATTaGGGGACCCGCAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGARPCVAIRVLPLNGVAGDEPY*GTRRGW
Trigger: CCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCC...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FWPTLHITKATGCSPTGHVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...GTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGTGCAAGGCCCTGCGTaGCTATTCGGGTTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRVQGPA*LFGFSP
Trigger: GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCAC...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGAGGCCCCTGGCTCCTTaGCTCTGTGCTGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWRPLAP*LCAAVR
Trigger: CCTCACGGCAGCACAGAGCCAAGGAGCCAGGGGCCT...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCACCAGGCCTGGGACCTaGGCCAGCCTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGTRPGT*ASLKKG
Trigger: TCCCTTCTTCAGGCTGGCCCAGGTCCCAGGCCTGGT...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGACCAGGCCTGGGACCTaGGCCAGCCTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRTRPGT*ASLKKG
Trigger: TCCCTTCTTCAGGCTGGCCCAGGTCCCAGGCCTGGT...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR CCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTAGAAGGGAAGAAGCCTaGAGGGCAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRRREEA*RAARGL
Trigger: GAGGCCTCTCGCTGCCCTCCAGGCTTCTTCCCTTCT...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
3UTR CAA 72 bp TATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: YVLLVLASQVSP*MVQGPAWLFGF
Trigger: GAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR TCA 90 bp GCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: AGPFGLLKSPTRLSLQWSWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...GCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp AGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: SAGGGQLYLCRSHRFSRHILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...GTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: CCPLDDVGTITVLGFLPDDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...GTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGGGCCACTGGCTGGGCTaGTCATCAGAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CLFSGAITLSIHFSGMMEGHWLG*SSEPLW
Trigger: CCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCC...CTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGGGCTCCCTGTTGGTCTaGGTGAAGCAGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSEGSLLV*VKQCPL
Trigger: CAGAGGACACTGCTTCACTCAGACCAACAGGGAGCC...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGGCAGGTCGTTGGCGGTaGTGCCCACTGGACGACGTC +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLAGRWR*CPLDDV
Trigger: GACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGC...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp CATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HCWVVHQIPLVRQSSEGLGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...CAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp TCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SGKAPRAWLIPRCFERAMGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...CATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp TGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGAAGCAGTGTCCTCTGGATCCTGCCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: CRAWLPVGLSEAVSSGSCQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...GCAGGATCCAGAGGACACTGCTTCACTCAGACCAACAGGGAGCCAGGCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp GCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: AGSCIRSPLSGKAPRAWLQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...CAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: FWPTLHITKATGCSPTGHDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...GTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: LLGRASDPPCQAKLRGLGLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...ACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVRLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CACTCTCTCCATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAAAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: HSLHPLFGNDGEVSRESQRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...TTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: VGGAAHWTTSAQSLCWGSHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...AGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGGGACCCGCAGAGGCTaGCTCAGAAGAGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGPPFILPRLLAVLQQATGTRRG*LRRDCS
Trigger: AGAGCAGTCTCTTCTGAGCCAGCCTCTGCGGGTCCC...TGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCGCGGTTATGTCCTCCTaGTACTTGCGTCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVAVMSS*YLRRRC
Trigger: ACACCTGCGACGCAAGTACCAGGAGGACATAACCGC...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGAGCCCCTGCAGGGCCTaGCTCCCTGTTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWSPCRA*LPVGLS
Trigger: ACTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCT...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATACAGACAAGTGGTGTTaGCCCCAGATGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKSPTRLSLQWSHTDKWC*PQMGHS
Trigger: GCTGTGCCCCATCTGGGGCCAACACCACTTGTCTGT...ATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR TCA 90 bp TACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTCATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YQGYWLFSNRPQRLCPPGHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...ACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR TCA 90 bp CTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: LAHPSYYQGYWLFSNRPQWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...CTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSEILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: GKAPRAWLIPRCFERAMRSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...CCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGCGTCGGTACCGAAGCTaGGGACACTCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLRRYRS*GHSLQG
Trigger: GCCCTGGAGAGAGTGTCCTCAGCTTCGGTACCGACG...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VHQIPLVRQSSEGLVDSTGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...CGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp GGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRTLWTPQVSDSSVSSVEGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...CTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp GTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCTCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VRRTNRLRRDKVASAQSVSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...GACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp CATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAACCCGGGGAGCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: HPLFGNDGEVSRESQPGEQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...CTCCCCGGGTTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTCCTTGGCTCTGTGCTaGCGTGAGGTCCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCSLALC*REVRCS
Trigger: GCTGCACCGGACCTCACGGCAGCACAGAGCCAAGGA...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GCSPTGHSGYVLLVLASQAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...CTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGGCGGTGCTGCCCACTaGACGACGTCGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCGGAAH*TTSAQS
Trigger: TGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCC...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp CTACAAAGCTTTTCCAGGGTGGGAGGCATCCAGTTACACCATTTTGACCAAAGGCCCAAGGCAGGTCGTTaGCGGTGCTGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LQSFSRVGGIQLHHFDQRPKAGR*RCCPLD
Trigger: GTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGG...CCTTTGGTCAAAATGGTGTAACTGGATGCCTCCCACCCTGGAAAAGCTTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: GKAPRAWLIPRCFERAMRLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...CCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: AAHWTTSAQSLCWGSCLTKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...TGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CPLDDVGTITVLGFLPDSRLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACGTGGGCAGGACCCTTTaGACTCCTCAAGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SSLRLVCLFSGAITLSIHVGRTL*TPQVSD
Trigger: GTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCAC...GTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTGAAATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCGGGCACACCAAGGGCTaGGTGGGAGCAGGTACAGGG +
Preference number: 4 (lower is better)
Translates to: VKSSSGPPFILPRLLAVLGHTKG*VGAGTG
Trigger: CCCTGTACCTGCTCCCACCCAGCCCTTGGTGTGCCC...GAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTATCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: GLLKSPTRLSLQWSHHSLSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...GAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGTACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTGCGGTTATGTCCTCCTaGTACTTGCGTCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRAVMSS*YLRRRC
Trigger: ACACCTGCGACGCAAGTACCAGGAGGACATAACCGC...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCTATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLYYQGY*LFSNRP
Trigger: TGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATA...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGCTTCCCTGGCAGATGTaGGATGTTACAGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGLPWQM*DVTDKW
Trigger: CCACTTGTCTGTAACATCCCACATCTGCCAGGGAAG...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR TCA 90 bp GCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: AGSCIRSPLSGKAPRAWLWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...CAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PGRAGHSPSGATGWADHQNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATAGATGGTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: SAQSLCWGSCLTAGPHRWWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...CCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp CTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LWTPQVSDSSVSSVEPSLILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...GAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSEDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp CCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PQVSDSSVSSVEPSLSPSDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...GGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGATCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GVGSCTCADHTGFPDTGRSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...TCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GCAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 4 (lower is better)
Translates to: AGTGRCGQDPLDSSSLRLLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...GAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTAGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp ATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IFWPTLHITKATGCSPTGGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...GCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTTCCAGCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCATCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VPALHPLLGRASDPPCQASIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...TGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp AGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTGATGGTGCAAGGCCCTaGGTGGCTATTCGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLRLVCLFSGAITLSIHFDGARP*VAIRVL
Trigger: GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC...AAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCTGTCCTCCTGGTACTTaGGTCGCAGGTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGCPPGT*VAGVTL
Trigger: AAGGGTGACACCTGCGACGCAAGTACCAGGAGGACA...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACTGTTTTCTAGCAGCTaGCACACTGCATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SPTGHSGYVLLVLASQVSLFSSS*HTASSM
Trigger: CATGGAGGATGCAGTGTGCCAGCTGCTAGAAAACAG...TGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTCTGTTTTCTAGCAGCTaGCACACTGCATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: DGARPCVAIRVLPLNGVALFSSS*HTASSM
Trigger: CATGGAGGATGCAGTGTGCCAGCTGCTAGAAAACAG...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp GTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: VHQIPLVRQSSEGLVDSTNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...CGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRLVCLFSGAITLSIHFSAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...CGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVAKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKSPTRLSLQWSHLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...ATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACACAGGCAACTGGCCTCTaGACTGGCTGTGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: VGSCTCADHTGFPDTGRTQATGL*TGCDRV
Trigger: AACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG...TGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp AGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SAGGGQLYLCRSHRFSRHRLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...GTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CACTCTCTCCATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAAGCGGTTATGTCCTCCTaGTACTTGCGTCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HSLHPLFGNDGEVSRESQAVMSS*YLRRRC
Trigger: ACACCTGCGACGCAAGTACCAGGAGGACATAACCGC...TTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTCCTGGCCTCACTCTCTaGGCTCCCACCGGTAATGGT +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCPGLTL*APTGNG
Trigger: ACCATTACCGGTGGGAGCCCAGAGAGTGAGGCCAGG...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
3UTR CAA 72 bp TCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCA +
Preference number: 4 (lower is better)
Translates to: SSSIAGSCIRSP*SGKAPRAWLIP
Trigger: TGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGACTCAGCATCCTTTaGCCGGGGTGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLGLSIL*PGWLQS
Trigger: GCTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCC...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: SPTRLSLQWSHHSLHPLFWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...GAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: FWPTLHITKATGCSPTGHVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...GTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp ACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCAGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: TCADHTGFPDTGRTATPPDSTVL*ESHEES
Trigger: GGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATC...TGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp TGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CWVVHQIPLVRQSSEGLVSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...AACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525895.5
CDS-3UTR TCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTGCTTCTCTCTTCTCTaGAAGCCAAAGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWCFSLL*KPKAPG
Trigger: GCCAGGGGCCTTTGGCTTTCAGAGAAGAGAGAAGCA...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp ATAGGGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATTCTAACCTCCAGGTGTaGGATTTTAAGATCAGTATT +
Preference number: 4 (lower is better)
Translates to: IGPGRAGHSPSGATGWADSNLQV*DFKISI
Trigger: AATACTGATCTTAAAATCTCACACCTGGAGGTTAGA...ATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR GCA 90 bp GCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVLVPITQVFQTLVEQRREHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...GCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGGGCCTCTTTGACAAGTaGTGGGGGTGGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLGLFDK*WGWAAV
Trigger: TACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGCC...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp TCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACATCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGPPFILPRLLAVLQQATSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...TGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCTCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GTGAAATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCGACAAGTGCTGGGGGTaGGCAGCTGTACTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: VKSSSGPPFILPRLLAVLDKCWG*AAVLVP
Trigger: CGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTC...GAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTAAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTGAAATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCAGGTACAGGGCGCTGTaGGCAGGACCCTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: VKSSSGPPFILPRLLAVLRYRAL*AGPFGL
Trigger: GAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCT...GAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CACTCTCTCCATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAACCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: HSLHPLFGNDGEVSRESQPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...TTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCCCTCTGGCTGGTCTTaGGGCTGTTATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLPSGWS*GCYSPC
Trigger: ACAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGG...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: HPSYYQGYWLFSNRPQRLSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...TAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: YQGYWLFSNRPQRLCPPGHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...ACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CAGCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: QLFIHCWVVHQIPLVRQSHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...GCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATACGGCGTGACAAGGTaGCCTCAGCACAGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: HPSYYQGYWLFSNRPQRLYGVTR*PQHSLS
Trigger: TGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTA...TAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPYYQGY*LFSNRP
Trigger: TGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATA...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCATATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPTGHSGYVLLVLASQVSYYQGY*LFSNRP
Trigger: TGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATA...TGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGACTAGGGTAAACCCCTaGGCTGCAGCCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CLFSGAITLSIHFSGMMETRVNP*AAAPKG
Trigger: TCCTTTGGGGGCTGCAGCCCAGGGGTTTACCCTAGT...CTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR TCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGCATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp GGTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACCATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GGLDEAEFSKENVCSLAYHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...GTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525279.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR TCA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCATGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVAWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCGTTCCAGCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: PFQLFIHCWVVHQIPLVRWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...CCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp CCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGGATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: PQFGSISRRPVKMIPYCGILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...CCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR TCA 90 bp CATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: HCWVVHQIPLVRQSSEGLGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...CAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp CTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGGTTGGGGTTCTTGCCTaGCAGCAGGTCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: LVCLFSGAITLSIHFSGMVGVLA*QQVLID
Trigger: ATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAAC...CATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTCTCCGAGGGCTTGGTTaGTTCCACGGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCLRGLG*FHGALR
Trigger: TCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAG...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp AGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTGTCCACTTTTCGGGAATaGTGGAGAGGTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RHQAVHGIVHEHNPGCFLSTFRE*WRGLQG
Trigger: TCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGA...CAGAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp GTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGTTGCTGTGAGGAGATaGACCTTATTGGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: VCLFSGAITLSIHFSGMMVAVRR*TLLGDP
Trigger: CGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAAC...CATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: VTLDGARPCVAIRVLPLNSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...ATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: DGARPCVAIRVLPLNGVASSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGAGCAGTTTTTGCAAGTaGAATCATCTTCTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLSSFCK*NHLLAH
Trigger: GTGGGCCAGAAGATGATTTCACTTGCAAAAACTGCT...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGCCCTGTTGGTCTGAGTaGAGCAGTGTCCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLPCWSE*SSVLWI
Trigger: GATCCAGAGGACACTGCTTCACTCAGACCAACAGGG...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp AAGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACCAGTTACACCATTTTaGCCAAAGGAGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: KCWGWAAVLVPITQVFQTPVTPF*PKELHW
Trigger: CCAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGG...TGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR TCA 90 bp CCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGGGGCAGCCTCTCCATTTaGCAAGCAAAGCCGAAGACG +
Preference number: 4 (lower is better)
Translates to: PQFGSISRRPVKMIPYCGGSLSI*QAKPKT
Trigger: CGTCTTCGGCTTTGCTTGTCAAATGGAGAGGCTGCC...CCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp ACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCAGCAAATTATTCAGTaGAGAACCTGGCAATTCCAT +
Preference number: 4 (lower is better)
Translates to: TGRCGQDPLDSSSLRLVCQQIIQ*RTWQFH
Trigger: ATGGAATTGCCAGGTTCTTCACTGAATAATTTGCTG...ACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527784.5
CDS-3UTR GCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCCATTGCTGGGTCGTaGATCAGATCCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWSIAGS*IRSPLS
Trigger: TGACAAGGGGGATCTGATGCACGACCCAGCAATGGA...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp TCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATAGATGGCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: SAQSLCWGSCLTAGPHRWQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...CCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR GCA 90 bp ATTGCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCTGGTCTTGGTAGAGGCCGTCTCTCTCCGTTaGCATGGCACCCACGCGGCG +
Preference number: 4 (lower is better)
Translates to: IAANSDILSWSANLVLVEAVSLR*HGTHAA
Trigger: CGCCGCGTGGGTGCCATGGCAACGGAGAGAGACGGC...CTCTACCAAGACCAGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR GCA 90 bp TCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTTTCCGGAACCCAGGTTaGCGTCTCTCTCCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SEKDIKQSMASSMSTILAFRNPG*RLSPLP
Trigger: TGGCAACGGAGAGAGACGGCAACCTGGGTTCCGGAA...AGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000528488.5
CDS-3UTR GCA 90 bp TCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAAGAGAGAATCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSIAGSCIRSPLSGKAPKRESG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGATTCTCTCTT...CGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534249.5
CDS-3UTR CCA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PGTCVAGVTLDGARPCVALAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGCAGGTCCTCATAGATaGCAGCCACACTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCAGPHR*QPHCPG
Trigger: TCCTGGACAGTGTGGCTGCCATCTATGAGGACCTGC...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SSLRLVCLFSGAITLSIHAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...GTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: AVLVPITQVFQTLVEQRRAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...GCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp AAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGAATCTCTTTGACAAGTGCTaGGGGTGGGCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: KAPRAWLIPRCFERAMRNLFDKC*GWAAVL
Trigger: AAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAG...ATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp TTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACCACAGTCTGTCAGCTTaGGGCCTAAGTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FWPTLHITKATGCSPTGHHSLSA*GLSEVH
Trigger: GTGAACTTCACTTAGGCCCCAAGCTGACAGACTGTG...GTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGGAGCCGACCGGTTCTaGCAGCCTCTCCATTTGACA +
Preference number: 4 (lower is better)
Translates to: GLDEAEFSKENVCSLAYTGADRF*QPLHLT
Trigger: TGTCAAATGGAGAGGCTGCCAGAACCGGTCGGCTCC...AGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp GAGCACAATCCTGGCTGCTTTCTGAGTGAGCTCCAGCGGGAAATCAGGACACAGTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: EHNPGCFLSELQREIRTQWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...CTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000525895.5
ENST00000527667.5
ENST00000528488.5
CDS-3UTR TCA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACATGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: IIFWPTLHITKATGCSPTWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: VTLDGARPCVAIRVLPLNGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...ATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp AGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SAGGGQLYLCRSHRFSRHGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...GTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 4 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACATCCTCCATGTAGGTaGGGACATGTCGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VAWTKLNSRKRMCVPWHTHPPCR*GHVAEV
Trigger: CACCTCAGCGACATGTCCTCACCTACATGGAGGATG...TGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp AATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGGGCAGGAGCATAACATaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NRHFCPQFGSISRRPVKMGRSIT*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCATGTTATGCTCCTGCC...CATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR GCA 90 bp GGTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGLDEAEFSKENVCSLAYEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...GTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR GCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGGGCAGCTGTACTTGTaGCGATCACACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCGQLYL*RSHRFS
Trigger: GGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCC...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp ATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: IFWPTLHITKATGCSPTGNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...GCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp AGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTGAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: RHQAVHGIVHEHNPGCFLNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...CAGAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525279.5
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VGSCTCADHTGFPDTGRTKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...TGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GTGAAATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCTCATCAGAGCCCCTCTaGCTGGTCTTGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: VKSSSGPPFILPRLLAVLSSEPL*LVLGLL
Trigger: TAACAGCCCCAAGACCAGCCAGAGGGGCTCTGATGA...GAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGCGGTTATGTCCTCCTaGTACTTGCGTCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IIFWPTLHITKATGCSPTAVMSS*YLRRRC
Trigger: ACACCTGCGACGCAAGTACCAGGAGGACATAACCGC...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAAGTGAAATCATCTTCTaGCCCACCCTTCATATTACC +
Preference number: 4 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVASEIIF*PTLHIT
Trigger: GGTAATATGAAGGGTGGGCCAGAAGATGATTTCACT...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGGGACTCAGCATCCTTTaGCCGGGGTGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: AANSDILSWSANRHFCPQGLSIL*PGWLQS
Trigger: GCTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCC...CTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR TCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVANCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: PQVSDSSVSSVEPSLSPSGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...GGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAAGCTTGGGGCCTAAGTaGAGTTCACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: IIFWPTLHITKATGCSPTSLGPK*SSQADR
Trigger: CCTATCAGCCTGTGAACTTCACTTAGGCCCCAAGCT...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR GCA 90 bp GTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACAGAGACCCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: VAWTKLNSRKRMCVPWHTETRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGGGTCTC...TGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR CCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGCTGTTTTCTAGCAGCTaGCACACTGCATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLLFSSS*HTASSM
Trigger: CATGGAGGATGCAGTGTGCCAGCTGCTAGAAAACAG...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp GGTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: GGLDEAEFSKENVCSLAYNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...GTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR CCA 90 bp GTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VAGVTLDGARPCVAIRVLSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...GAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: PTGHSGYVLLVLASQVSPSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...GGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGGCACAATCACTGTGTTaGGGTTCTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: CLFSGAITLSIHFSGMMEAQSLC*GSCLTA
Trigger: TGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGC...CTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTAAAGCTCCGAGGGCTTaGTTGATTCCACGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCKAPRA*LIPRCF
Trigger: AAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp AAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: KRHQAVHGIVHEHNPGCFLFIHC*VVHQIP
Trigger: GGGGATCTGATGCACGACCCAGCAATGGATGAAGAG...AAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGCGTCTGTCTCTTCAGTaGAGCCATCACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CLFSGAITLSIHFSGMMERLSLQ*SHHSLH
Trigger: ATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACG...CTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp CACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATATTACCAAGGCTACTaGCTGTTCTCCAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPSYYQGYWLFSNRPQRLYYQGY*LFSNRP
Trigger: TGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATA...TAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTAGTGAAATCATCTTCTaGCCCACCCTTCATATTACC +
Preference number: 4 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVSEIIF*PTLHIT
Trigger: GGTAATATGAAGGGTGGGCCAGAAGATGATTTCACT...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp AAGAGGAAATCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: KRKSEKDIKQSMASSMSTILAAF*VSSSGK
Trigger: TTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGAT...TGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGATTTCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp TTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: FWPTLHITKATGCSPTGHGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...GTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: AGSEETALKRLGGLTGYGGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp CCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGGAGGTTACAGTGAGCTaGGATAGCACCACTTTACTC +
Preference number: 4 (lower is better)
Translates to: PTVRKHLQKARKNDTLLWEVTVS*DSTTLL
Trigger: GAGTAAAGTGGTGCTATCTCAGCTCACTGTAACCTC...CCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp GGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTAGGCAGAGGTTACAGTaGGCTGAGATAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: GLDEAEFSKENVCSLAYTRQRLQ*AEIAPL
Trigger: AAGTGGTGCTATCTCAGCTCACTGTAACCTCTGCCT...AGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp GGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTAGCACAAGAATCGCATaGACTCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLDEAEFSKENVCSLAYTSTRIA*TQEAEV
Trigger: AACCTCTGCCTCCTGAGTTCATGCGATTCTTGTGCT...AGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR GCA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGCAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLANRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR GCA 90 bp GCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAGCAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: ANRHFCPQFGSISRRPVKANRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC...TTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR GCA 90 bp AAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATC +
Preference number: 4 (lower is better)
Translates to: KRHQAVHGIVHEHNPGCFQLFIH*WVVHQI
Trigger: GATCTGATGCACGACCCAGCAATGGATGAAGAGCTG...AAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp TCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGCTGTTTTCTAGCAGCTaGCACACTGCATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SFMVSKSPFLPTVRKHLQLFSSS*HTASSM
Trigger: CATGGAGGATGCAGTGTGCCAGCTGCTAGAAAACAG...CTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR CCA 90 bp TGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CSPTGHSGYVLLVLASQVLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...CACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CCA 90 bp GCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCAGTGAAATCATCTTCTaGCCCACCCTTCATATTACC +
Preference number: 4 (lower is better)
Translates to: AVLVPITQVFQTLVEQRRSEIIF*PTLHIT
Trigger: GGTAATATGAAGGGTGGGCCAGAAGATGATTTCACT...GCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525895.5
CDS-3UTR TCA 90 bp GACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAACATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DEAEFSKENVCSLAYTVKHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...TTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525279.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR TCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp ACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCAAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TCADHTGFPDTGRTATPPNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...TGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR TCA 90 bp AACAGTGATATTCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTTCGGATGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: NSDILSWSANRHFCPQFGWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...TCCGAACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR TCA 90 bp GACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAATGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: DEAEFSKENVCSLAYTVKWLLSE*APAGNQ
Trigger: CTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCA...TTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR TCA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGTTAATGGAGTTGCTGTaGGGAGATGAACCTTATTGG +
Preference number: 4 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRLMELL*GDEPYW
Trigger: CCAATAAGGTTCATCTCCTCACAGCAACTCCATTAA...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR TCA 90 bp TCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAATATTCAGTGAAGCAGGACTTTGGGGCATaGGAACCATGGAGCCGACCG +
Preference number: 4 (lower is better)
Translates to: SRKRMCVPWHTLLKYSVKQDFGA*EPWSRP
Trigger: CGGTCGGCTCCATGGTTCTCATGCCCCAAAGTCCTG...CTTCACTGAATATTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR GCA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGCAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: IIFWPTLHITKATGCSPTANRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp CAGCTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QLFIHCWVVHQIPLVRQSLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...GCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: DGARPCVAIRVLPLNGVASDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp AAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGAATCACTGGTATGAAAATTaGTCGGGTGAAGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KAPRAWLIPRCFERAMRNHWYEN*SGEESK
Trigger: TTTGCTCTCTTCACCCGACCAATTTTCATACCAGTG...ATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR CCA 90 bp ACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATCCAAAGGAGCTTCACTaGTATGAAAATTGGTCGGGT +
Preference number: 4 (lower is better)
Translates to: TRLSLQWSHHSLHPLFGNPKELH*YENWSG
Trigger: ACCCGACCAATTTTCATACCAGTGAAGCTCCTTTGG...ATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR CCA 90 bp TTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGCAATTTGCAGGACTTTaGGGCATGAGAACCATGGAG +
Preference number: 4 (lower is better)
Translates to: LPTVRKHLQKARKNDTLLQFAGL*GMRTME
Trigger: CTCCATGGTTCTCATGCCCCAAAGTCCTGCAAATTG...CAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAACATCCTCCATGTAGGTaGGGACATGTCGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TKLNSRKRMCVPWHTLLKHPPCR*GHVAEP
Trigger: TGGCTCAGCGACATGTCCTCACCTACATGGAGGATG...TTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525279.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR TCA 90 bp GTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACATGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: VAWTKLNSRKRMCVPWHTWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...TGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR TCA 90 bp TTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: LPTVRKHLQKARKNDTLLWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...CAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR TCA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp TTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTACCAGTTACACCATTTTaGCCAAAGGAGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: FLPTVRKHLQKARKNDTLPVTPF*PKELHW
Trigger: CCAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGG...TAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR CCA 90 bp GCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: AANSDILSWSANRHFCPQNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...CTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR CCA 90 bp GCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGAGGAATCCAAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: APRAWLIPRCFERAMRNPSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...TGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000534249.5
CDS-3UTR CCA 90 bp GGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTCCAAAGGAGCTTCACTaGTATGAAAATTGGTCGGGT +
Preference number: 4 (lower is better)
Translates to: GLDEAEFSKENVCSLAYTPKELH*YENWSG
Trigger: ACCCGACCAATTTTCATACCAGTGAAGCTCCTTTGG...AGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR CCA 90 bp CTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCAGTGATATTCTTTCATaGTCAGCAAATCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LWTPQVSDSSVSSVEPSLSDILS*SANLVL
Trigger: CAAGACCAGATTTGCTGACCATGAAAGAATATCACT...GAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR CCA 90 bp CCCAGAAGAGTCATATTTCACTTGGCAAGGAGCCTCAAGAGTGCTGGTACAGATGAGTCATATTTCACTTaGCAAGGAGCCTCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PRRVIFHLARSLKSAGTDESYFT*QGASRV
Trigger: CACTCTTGAGGCTCCTTGCCAAGTGAAATATGACTC...ATCTGTACCAGCACTCTTGAGGCTCCTTGCCAAGTGAAATATGACTCTTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR TCA 90 bp AAAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAATGGCTTGGACGAAGCTaGATTCTCGAAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: KNRHFCPQFGSISRRPVKWLGRS*ILEREC
Trigger: ACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCA...TTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR TCA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR TCA 90 bp AAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KRHQAVHGIVHEHNPGCFGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...AAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR TCA 90 bp AAAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAACCCGTCTTATTCAGTaGAGAACCTGGCAATTCCAT +
Preference number: 4 (lower is better)
Translates to: KNRHFCPQFGSISRRPVKTRLIQ*RTWQFH
Trigger: ATGGAATTGCCAGGTTCTTCACTGAATAAGACGGGT...TTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR GCA 90 bp GGAAATCAGGACACAGTAATTGCAGCAAACAGTGATATTCTTTCATGGTCAGCAGAGCACAATCCTGGCTaGTTTCTGAGTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GNQDTVIAANSDILSWSAEHNPG*FLSELQ
Trigger: CTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC...TGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000527667.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR GCA 90 bp CCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCAAAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: PFLPTVRKHLQKARKNDTKNRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTTT...GGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR GCA 90 bp GTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACAAAGGAGCCTCAAGAGTaGTGGTACAGATTAAATGGT +
Preference number: 4 (lower is better)
Translates to: VAWTKLNSRKRMCVPWHTKEPQE*WYRLNG
Trigger: ACCATTTAATCTGTACCAGCACTCTTGAGGCTCCTT...TGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR CCA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAAGTGAAATCATCTTCTaGCCCACCCTTCATATTACC +
Preference number: 4 (lower is better)
Translates to: IIFWPTLHITKATGCSPTSEIIF*PTLHIT
Trigger: GGTAATATGAAGGGTGGGCCAGAAGATGATTTCACT...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CCA 90 bp GTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACAAGAATGTGTGTTCCCTaGCATACACTGTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: VAWTKLNSRKRMCVPWHTRMCVP*HTLLKP
Trigger: GGGTTTTAACAGTGTATGCCAGGGAACACACATTCT...TGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR TCA 90 bp CCAAAGGAGCTTCACTGGTATGAAAATTGGTCGGGTGAAGAGAGCAAACAAGAGGGCAAAGAGGAAATCTaGAAAAGACATCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: PKELHWYENWSGEESKQEGKEEI*KRHQAV
Trigger: GACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCC...CTCTTGTTTGCTCTCTTCACCCGACCAATTTTCATACCAGTGAAGCTCCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR TCA 90 bp GCGGGAAATCAGGACACAGTAATTGCAGCAAACAGTGATATTCTTTCATGGTCAAACCTGAGGTACCACTaGAGTAGGTCACACAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGNQDTVIAANSDILSWSNLRYH*SRSHSS
Trigger: TGAACTGTGTGACCTACTTCAGTGGTACCTCAGGTT...TGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525279.5
CDS-3UTR CCA 90 bp TGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CLFSGAITLSIHFSGMMELAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...CTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395460.6
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CCA 90 bp AGCTTTTCCAGGGTGGGAGGCATCCAGTTACACCATTTTGACCAAAGGAGCTTCCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SFSRVGGIQLHHFDQRSFLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...GAAGCTCCTTTGGTCAAAATGGTGTAACTGGATGCCTCCCACCCTGGAAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528488.5
ENST00000532633.5
CDS-3UTR CCA 90 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAAAATGATACCCTATTGTaGGGGGTGGCTTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: TKLNSRKRMCVPWHTLLKNDTLL*GVAWTK
Trigger: CTTCGTCCAAGCCACCCCCCACAATAGGGTATCATT...TTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR CCA 90 bp TTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTACACTGGTATGAAAATTaGTCGGGTGAAGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: FLPTVRKHLQKARKNDTLHWYEN*SGEESK
Trigger: TTTGCTCTCTTCACCCGACCAATTTTCATACCAGTG...TAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR CCA 90 bp GCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAAGAATGTGTGTTCCCTaGCATACACTGTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: ANRHFCPQFGSISRRPVKRMCVP*HTLLKH
Trigger: ATGTTTTAACAGTGTATGCCAGGGAACACACATTCT...TTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525279.5
CDS-3UTR CCA 90 bp TTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGAAAGCCGAAGACGTGTaGCCTTTCATATATCTTACA +
Preference number: 4 (lower is better)
Translates to: LPTVRKHLQKARKNDTLLKAEDV*PFIYLT
Trigger: TGTAAGATATATGAAAGGCCACACGTCTTCGGCTTT...CAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR TCA 90 bp TTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTAAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FLPTVRKHLQKARKNDTLNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...TAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR TCA 90 bp AAAACCCCAGAAGAGTCATATTTCACTTGGCAAGGAGCCTCAAGAGTGCTGGTAAATTGCAGCAAACAGTaGTATTCTTTCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KTPEESYFTWQGASRVLVNCSKQ*YSFMVS
Trigger: GCTGACCATGAAAGAATATCACTGTTTGCTGCAATT...TACCAGCACTCTTGAGGCTCCTTGCCAAGTGAAATATGACTCTTCTGGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR TCA 90 bp AATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGTCTAACCTCCAGGTGTaGGATTTTAAGATCAGTATT +
Preference number: 4 (lower is better)
Translates to: NRHFCPQFGSISRRPVKMSNLQV*DFKISI
Trigger: AATACTGATCTTAAAATCTCACACCTGGAGGTTAGA...CATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR CCA 90 bp CCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PFLPTVRKHLQKARKNDTLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...GGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR CCA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CCA 90 bp AGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SKSPFLPTVRKHLQKARKSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...TTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR CCA 90 bp TCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATCTGGTACAGATTAAATaGTATAGAAACTTGACCCGT +
Preference number: 4 (lower is better)
Translates to: SPFLPTVRKHLQKARKNDLVQIK*YRNLTR
Trigger: ACGGGTCAAGTTTCTATACCATTTAATCTGTACCAG...ATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR TCA 90 bp GACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAAATGGTATAGAAACTTaGCCCGTAGGCTTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: DEAEFSKENVCSLAYTVKNGIET*PVGLSV
Trigger: AACTGACAAGCCTACGGGTCAAGTTTCTATACCATT...TTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR TCA 90 bp CAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTAAAACATGTAGAACCTaGGGTACCACTGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QQTVIFFHGQQIAIFAHSKTCRT*GTTEVG
Trigger: ACCTACTTCAGTGGTACCTCAGGTTCTACATGTTTT...ACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525279.5
CDS-3UTR GCA 90 bp CTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAATATTCAGCTGAGGTGTCAATTTaGAGGACTTTGGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LNSRKRMCVPWHTLLKYSAEVSI*RTLGHE
Trigger: CTCATGCCCCAAAGTCCTGCAAATTGACACCTCAGC...TGAATATTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR GCA 90 bp ATTGCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCTGGTCTTGGTAGAGAAAAATCGCCATTTTTaGCCACAGTTCGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: IAANSDILSWSANLVLVEKNRHF*PQFGSI
Trigger: GATGCTTCCGAACTGTGGGCAAAAATGGCGATTTTT...CTCTACCAAGACCAGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR CCA 90 bp GCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGAGTGATATTCTTTCATaGTCAGCAAATCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: AANSDILSWSANRHFCPQSDILS*SANRHF
Trigger: AAAATGGCGATTTGCTGACCATGAAAGAATATCACT...CTGTGGGCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR CCA 90 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAAAGAATGTGTGTTCCCTaGCATACACTGTTAAAACTG +
Preference number: 4 (lower is better)
Translates to: TKLNSRKRMCVPWHTLLKRMCVP*HTLLKL
Trigger: CAGTTTTAACAGTGTATGCCAGGGAACACACATTCT...TTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR CCA 90 bp GTAATTGCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCGCCATTTTTGCGAGCCTCAAGAGTGCTaGTACAGATTAAATGGTATA +
Preference number: 4 (lower is better)
Translates to: VIAANSDILSWSANRHFCEPQEC*YRLNGI
Trigger: TATACCATTTAATCTGTACCAGCACTCTTGAGGCTC...GCAAAAATGGCGATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS-3UTR CCA 90 bp AATCAGGACACAGTAATTGCAGCAAACAGTGATATTCTTTCATGGTCAGCAAATCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: NQDTVIAANSDILSWSANLAIPY*LISSLF
Trigger: AAACAGGGAAGATATTAGCCAATATGGAATTGCCAG...ATTTGCTGACCATGAAAGAATATCACTGTTTGCTGCAATTACTGTGTCCTGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525279.5
ENST00000527667.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCACGCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCTTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PRPPACRPRPRQVVGGAALLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...GGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp GCCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: ANPGRGPGRQATGLWTGCAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...ACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCACGCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: PRPPACRPRPRQVVGGAACIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...GGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS GCA 90 bp TCCAGCTCTCCGGCTTCCGGAACCCAGGTTGCCGTCTCTCTCCGTTaGCATGGCACCCACGCGGCGGAAGGGGGACGGGAGCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SSSPASGTQVAVSLR*HGTHAAEGGRELEE
Trigger: CTCCTCCAGCTCCCGTCCCCCTTCCGCCGCGTGGGTGCCATGGCAACGGAGAGAGACGGCAACCTGGGTTCCGGAAGCCGGAGAGCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533124.5
CDS-3UTR CAA 90 bp GCCCTCCAGCGTGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: ALQRAGPAQGRSLAVLPTAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...AGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCACGCTGGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS GCA 90 bp GGGGTGGCTTCAAAGCTCCAGCTCTCCGGCTTCCGGAACCCAGGTTaGCGTCTCTCTCCGTTGCCATGGCACCCACGCGGCGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: GVASKLQLSGFRNPG*RLSPLPWHPRGGRG
Trigger: CCCCCTTCCGCCGCGTGGGTGCCATGGCAACGGAGAGAGACGGCAACCTGGGTTCCGGAAGCCGGAGAGCTGGAGCTTTGAAGCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528488.5
ENST00000533124.5
CDS-3UTR CAA 90 bp TGCCGGCCCCGCCCAAGGCAGGTCGTTGGCGGTGCTGCCCACTGGACGACGTCGCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CRPRPRQVVGGAAHWTTSQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...CGACGTCGTCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGCGGGGCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp TGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGAAGCAGTGTCCTCTGGATCCTGCGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: CRAWLPVGLSEAVSSGSCAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...GCAGGATCCAGAGGACACTGCTTCACTCAGACCAACAGGGAGCCAGGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp CCAACCCGGGGAGGGGTCCGGGAAGGCAGGCAACTGGCCTCTGGACTGGCTGTGCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PTRGGVREGRQLASGLAVQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...CACAGCCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: QVSPLMVQGPAWLFGFSPLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...GGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS CCA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTaGGACCTGGGCCAGCCTGAAGAAGGGAAGAAGCAGCCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: QATGLWTGCDRVDQA*DLGQPEEGKKQPFQ
Trigger: CTGGAACGGCTGCTTCTTCCCTTCTTCAGGCTGGCCCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378615.7
CDS-3UTR CAA 90 bp CTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: LDDVGTITVLGFLPDSRSAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...GGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp ATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: IHLPGPLAGLIIRAPLAGSQVSP*MVQGPA
Trigger: CGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA...ACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCATGTCCTCCTGGTACTaGCGTCGCAGGTGTCACCCT +
Preference number: 5 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIIMSSWY*RRRCHP
Trigger: AGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS CCA 90 bp CTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTaGGCCAGCCTGAAGAAGGGAAGAAGCAGCCGTTCCAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LASGLAVTELTRPGT*ASLKKGRSSRSSSS
Trigger: TGAAGAGCTGGAACGGCTGCTTCTTCCCTTCTTCAGGCTGGCCCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378615.7
CDS-3UTR CAA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: AGPFGLLKSPTRLSLQWSAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...GCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp AGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: SAGGGQLYLCRSHRFSRHAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...GTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp GCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: AVLPTGRRRHNHCVGVLALLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...GGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp CATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: HSPSGATGWADHQSPSGWCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...CCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: PGRAGHSPSGATGWADHQCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCTTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SPSGATGWADHQSPSGWSCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...AGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 5 (lower is better)
Translates to: PGRAGHSPSGATGWADHQPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...CTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CAA 90 bp GGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GVTLDGARPCVAIRVLPLSQVSP*MVQGPA
Trigger: CGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA...AAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CAGGCAACTGGCCTCTGGACTGGCTGTGACCGAGTTGACCAGGCCTGGGACCTGGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: QATGLWTGCDRVDQAWDLGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...CAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAGTCCAGAGGCCAGTTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp GGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATGCCCAAGGCAGGTCGTaGGCGGTGCTGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: GPFGLLKSPTRLSLQWSHAQGRS*AVLPTG
Trigger: TCCAGTGGGCAGCACCGCCAACGACCTGCCTTGGGC...ATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGAGCCCCTCTGGCTGGTCTCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: SPSGATGWADHQSPSGWSQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...AGACCAGCCAGAGGGGCTCTGATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
ENST00000528488.5
CDS-3UTR CAA 90 bp GTCGTTGGCGGTGCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: VVGGAAHWTTSAQSLCWGCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...ACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGCACCGCCAACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp TCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: SPTGHSGYVLLVLASQVSLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...TGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: EVRRTNRLRRDKVASAQSLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...AGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 5 (lower is better)
Translates to: PGTCVAGVTLDGARPCVAPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GCTGCCCACTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACACTTCCGGAACCCAGGTaGCCGTCTCTCTCCGTTGCC +
Preference number: 5 (lower is better)
Translates to: AAHWTTSAQSLCWGSCLTLPEPR*PSLSVA
Trigger: GGCAACGGAGAGAGACGGCAACCTGGGTTCCGGAAG...TGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAGTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS CCA 90 bp CAGCTTCGACCTCACCACCAGCCGTTCCAGCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QLRPHHQPFQLFIHC*VVHQIPLVRQSSEG
Trigger: GCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGGTGGTGAGGTCGAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp GGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTCGGACTCAGCATCCTTaGACCGGGGTGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GVTLDGARPCVAIRVLPLRTQHP*TGVASK
Trigger: CTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCCG...AAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTTTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLLGRASDPPCQAKLRGLLLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...AAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGACTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: GVGSCTCADHTGFPDTGRLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...TCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGGTGCTTTGAGAGAGCCATGCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: SGKAPRAWLIPRCFERAMLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...CATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCTGAAGAAGGGAAGAAGCCTGGAGGGCAGCGAGAGGCCTCCTGTACAGAGAGCTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: PEEGKKPGGQREASCTESCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...GCTCTCTGTACAGGAGGCCTCTCGCTGCCCTCCAGGCTTCTTCCCTTCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR CAA 90 bp TCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTGCCGTCTCTCTCCGTaGCCATGGCACCCACGCGGC +
Preference number: 5 (lower is better)
Translates to: SSLRLVCLFSGAITLSIHCRLSP*PWHPRG
Trigger: GCCGCGTGGGTGCCATGGCAACGGAGAGAGACGGCA...GTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS GCA 90 bp GTGCAGCTTCGACCTCACCACCAGCCGTTCCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: VQLRPHHQPFQLFIH*WVVHQIPLVRQSSE
Trigger: CTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGGTGGTGAGGTCGAAGCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp GGCCAGGGAGAGCAGGCCATTCACCTTCCGGGGCCACTGGCTGGGCTGATCATCAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: GQGEQAIHLPGPLAGLIISKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...GATGATCAGCCCAGCCAGTGGCCCCGGAAGGTGAATGGCCTGCTCTCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: CVAGVTLDGARPCVAIRVGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...AACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: PTGHSGYVLLVLASQVSPGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...GGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCATTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSLLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPLLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: QQATAVMSSWYLRRRCHPAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...AGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CATCCACTTTTCGGGAATGATGGAGAGGTCTCCAGGGAGAGCCAACCCGGGGAGGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: HPLFGNDGEVSRESQPGEAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...CTCCCCGGGTTGGCTCTCCCTGGAGACCTCTCCATCATTCCCGAAAAGTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp GAGCACAATCCTGGCTGCTTTCTGAGTGAGCTCCAGCGGGAAATCAGGACACAGCTTCCGGAACCCAGGTaGCCGTCTCTCTCCGTTGCC +
Preference number: 5 (lower is better)
Translates to: EHNPGCFLSELQREIRTQLPEPR*PSLSVA
Trigger: GGCAACGGAGAGAGACGGCAACCTGGGTTCCGGAAG...CTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000528488.5
CDS TCA 90 bp AACAGATTCCTCCATGCCCCTCACCTTCACGGCTGCCTGTTCTGCTaGCCCTGCGAGGGCCGATCTAAAGATCTGAGGACTGCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: NRFLHAPHLHGCLFC*PCEGRSKDLRTARG
Trigger: CCCTCTAGCAGTCCTCAGATCTTTAGATCGGCCCTCGCAGGGTCAGCAGAACAGGCAGCCGTGAAGGTGAGGGGCATGGAGGAATCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624693.1
CDS CCA 90 bp CCTGAAGAAGGGAAGAAGCAGCCGTTCCAGCTCTTCATCCATTGCTaGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PEEGKKQPFQLFIHC*VVHQIPLVRQSSEG
Trigger: GCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGCTTCTTCCCTTCTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378615.7
CDS CCA 90 bp AGGAGTGTGGTGATCCCCTTCCAACACCAGGTGGTGGTTGTGACCTaGTGCTGGGAGTTGAGTTCCTTCTTGAGGCCTCAGGTACTGGGC +
Preference number: 5 (lower is better)
Translates to: RSVVIPFQHQVVVVT*CWELSSFLRPQVLG
Trigger: GCCCAGTACCTGAGGCCTCAAGAAGGAACTCAACTCCCAGCACCAGGTCACAACCACCACCTGGTGTTGGAAGGGGATCACCACACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624693.1
CDS-3UTR CAA 90 bp GTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCGGACTCAGCATCCTTaGACCGGGGTGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VLQQATAVMSSWYLRRRCRTQHP*TGVASK
Trigger: CTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCCG...ACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GCSPTGHSGYVLLVLASQTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...CTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: ALWAGPFGLLKSPTRLSLTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...AAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp ACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGTCAGCTTGGGGGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: TNRLRRDKVASAQSVSLGGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...CCCCAAGCTGACAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: PLLGRASDPPCQAKLRGLGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...AAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTATTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVLLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSELLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCTTGCTGAGGGCCTCTTaGACAAGTGCTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSLLRAS*TSAGGG
Trigger: CCCACCCCCAGCACTTGTCAAAGAGGCCCTCAGCAA...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp TGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: WLFSNRPQRLCPPGTCVAAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...TGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LWAGPFGLLKSPTRLSLQAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...CTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGCTGGCTGTGACCGAGTaGACCAGGCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: PFILPRLLAVLQQATAVMLAVTE*TRPGTW
Trigger: CCAGGTCCCAGGCCTGGTCAACTCGGTCACAGCCAG...CATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: DGARPCVAIRVLPLNGVACGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...AGCAACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp AGTGCTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SAGGGQLYLCRSHRFSRHCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...GTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CTGGGGGTGGGCAGCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 5 (lower is better)
Translates to: LGVGSCTCADHTGFPDTGPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...ACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGCTGCCCACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: SDSSVSSVEPSLSPSTFRSQVSP*MVQGPA
Trigger: CGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA...CCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAATGTCCTCCTGGTACTaGCGTCGCAGGTGTCACCCT +
Preference number: 5 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSMSSWY*RRRCHP
Trigger: AGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS GCA 90 bp CAGCCTGAAGAAGGGAAGAAGCAGCCGTTCCAGCTCTTCATCCATTaGTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: QPEEGKKQPFQLFIH*WVVHQIPLVRQSSE
Trigger: CTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAGCTGGAACGGCTGCTTCTTCCCTTCTTCAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378615.7
CDS-3UTR CAA 90 bp GCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: AGVTLDGARPCVAIRVLPSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...GGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCAGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: SPTGHSGYVLLVLASQVSGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...TGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: VTLDGARPCVAIRVLPLNGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...ATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TGGAGTTGCTGTGAGGAGATGAACCTTATTGGGGGACCCGCAGAGGCTGGCTCAGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: WSCCEEMNLIGGPAEAGSGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...TGAGCCAGCCTCTGCGGGTCCCCCAATAAGGTTCATCTCCTCACAGCAACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: VTLDGARPCVAIRVLPLNGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...ATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSEAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp CTTGATGGTGCAAGGCCCTGCGTGGCTATTCGGGTTCTCCCCCTTAATGGAGTTGCTCCGAGGGCTTGGTaGATTCCACGGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LDGARPCVAIRVLPLNGVAPRAW*IPRCFE
Trigger: CTCAAAGCACCGTGGAATCAACCAAGCCCTCGGAGC...AACTCCATTAAGGGGGAGAACCCGAATAGCCACGCAGGGCCTTGCACCATCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: LCPPGTCVAGVTLDGARPQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...GGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp AGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAATGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SGYVLLVLASQVSPLMVQCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...TTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSECIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp CTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: LVPITQVFQTLVEQRRLHCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...GTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp CCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 5 (lower is better)
Translates to: PQVSDSSVSSVEPSLSPSPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...GGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCGCAGGTGTCACCCTaGATGGTGCAAGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: PFILPRLLAVLQQATAVMSQVSP*MVQGPA
Trigger: CGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGA...CATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGATGTCCTCCTGGTACTaGCGTCGCAGGTGTCACCCT +
Preference number: 5 (lower is better)
Translates to: ALKRLGGLTGYGVTRWPQMSSWY*RRRCHP
Trigger: AGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT...CTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS CCA 90 bp ATTTGCAGGACTTTGGGGCATGAGAACCATGGAGCCGACCGGTTCTaGCAGCCTCTCCATTTGACAAGCAAAGCCGAAGACGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ICRTLGHENHGADRF*QPLHLTSKAEDVWP
Trigger: AGGCCACACGTCTTCGGCTTTGCTTGTCAAATGGAGAGGCTGCCAGAACCGGTCGGCTCCATGGTTCTCATGCCCCAAAGTCCTGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR CAA 90 bp ACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TTSAQSLCWGSCLTAGPHTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...ATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp CTCTTCATCCATTGCTGGGTCGTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: LFIHCWVVHQIPLVRQSSGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...GGAGCTTTGCCTGACAAGGGGGATCTGATGCACGACCCAGCAATGGATGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp AGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAACAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: SGYVLLVLASQVSPLMVQQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...TTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCCACCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: LVPITQVFQTLVEQRRLHQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...GTGGAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp GCTGTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: AVLVPITQVFQTLVEQRRCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...GCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp GTACTTGTGCCGATCACACAGGTTTTCCAGACACTGGTAGAACAGCGACGCCTCTGTGGGCAGGACCCTTaGGACTCCTCAAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: VLVPITQVFQTLVEQRRLCGQDP*DSSSLR
Trigger: TCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACA...GAGGCGTCGCTGTTCTACCAGTGTCTGGAAAACCTGTGTGATCGGCACAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS CCA 90 bp AGCAGCGAGGTTGGGAACGCTGGCTTTGGAGTCAGCCTTCAGGTCTaGTCTCCACCACTTATGAGCTGCATGACTGGCTACTACTTCTGT +
Preference number: 5 (lower is better)
Translates to: SSEVGNAGFGVSLQV*SPPLMSCMTGYYFC
Trigger: ACAGAAGTAGTAGCCAGTCATGCAGCTCATAAGTGGTGGAGACCAGACCTGAAGGCTGACTCCAAAGCCAGCGTTCCCAACCTCGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529980.5
CDS-3UTR CAA 90 bp CCTGGTACTTGCGTCGCAGGTGTCACCCTTGATGGTGCAAGGCCCTGCGTGGCTCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: PGTCVAGVTLDGARPCVAPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...AGCCACGCAGGGCCTTGCACCATCAAGGGTGACACCTGCGACGCAAGTACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CAA 90 bp CAGGTACAGGGCGCTGTGGGCAGGACCCTTTGGACTCCTCAAGTCTCCGACTCGCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: QVQGAVGRTLWTPQVSDSPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...CGAGTCGGAGACTTGAGGAGTCCAAAGGGTCCTGCCCACAGCGCCCTGTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395460.6
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SGPPFILPRLLAVLQQATTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...TGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATAGATGGACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SAQSLCWGSCLTAGPHRWTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...CCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp TCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATAGATGGGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: SAQSLCWGSCLTAGPHRWGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...CCATCTATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
ENST00000534249.5
CDS-3UTR CAA 90 bp CTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCAGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: LKSPTRLSLQWSHHSLHPGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...TGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp CATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACAGGTGCATCAGATCCCCCTaGTCAGGCAAAGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: HLLAHPSYYQGYWLFSNRCIRSP*SGKAPR
Trigger: CCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCA...CCTGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS GCA 90 bp CGCTGTTGCTTGATACATTTATTGAATCCCACTGCCTACTTTCCCTaGCTGGGGCAGACACCACAGCCAAGGAGTGTGGTGATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: RCCLIHLLNPTAYFP*LGQTPQPRSVVIPF
Trigger: GAAGGGGATCACCACACTCCTTGGCTGTGGTGTCTGCCCCAGGCAGGGAAAGTAGGCAGTGGGATTCAATAAATGTATCAAGCAACAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624693.1
CDS-3UTR CAA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGCGGACTCAGCATCCTTaGACCGGGGTGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLRTQHP*TGVASK
Trigger: CTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCCG...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp TGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGGAGCGGACTCAGCATCCTTaGACCGGGGTGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CLFSGAITLSIHFSGMMERTQHP*TGVASK
Trigger: CTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCCG...CTCCATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCGCAGGTGTCAAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: SPTGHSGYVLLVLASQVSSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...TGACACCTGCGACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LVCLFSGAITLSIHFSGMTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...CATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395460.6
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp AGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCTGGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: RHQAVHGIVHEHNPGCFLGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...CAGAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp GTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGATGTCCTCCTGGTACTaGCGTCGCAGGTGTCACCCT +
Preference number: 5 (lower is better)
Translates to: VCLFSGAITLSIHFSGMMMSSWY*RRRCHP
Trigger: AGGGTGACACCTGCGACGCAAGTACCAGGAGGACAT...CATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp CTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCAGCAGTATCCTCCCACTaGACACTTACAGCCGTTCCA +
Preference number: 5 (lower is better)
Translates to: LKSPTRLSLQWSHHSLHPAVSSH*TLTAVP
Trigger: TGGAACGGCTGTAAGTGTCAAGTGGGAGGATACTGC...TGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395460.6
CDS-3UTR CAA 90 bp CCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCGGACTCAGCATCCTTaGACCGGGGTGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: PFLPTVRKHLQKARKNDTRTQHP*TGVASK
Trigger: CTTTGAAGCCACCCCGGTCAAAGGATGCTGAGTCCG...GGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR CAA 90 bp CTGGACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: LDDVGTITVLGFLPDSRSPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...GGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp ACGACGTCGGCACAATCACTGTGTTGGGGTTCTTGCCTGACAGCAGGTCCTCATAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: TTSAQSLCWGSCLTAGPHSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...ATGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCCGACGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525895.5
ENST00000534249.5
CDS-3UTR CAA 90 bp ATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: IETKWCQNKAPAGPGSLLTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...CAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGGGCACAATCACTGTGTaGGGGTTCTTGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLGTITV*GFLPDS
Trigger: GCTGTCAGGCAAGAACCCCAACACAGTGATTGTGCC...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp TGTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: CIETKWCQNKAPAGPGSLGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...CAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp TTTCCAGGGTGGGAGGCATCCAGTTACACCATTTTGACCAAAGGAGCTTCACTGGGTGGGCAGCTGTACTaGTGCCGATCACACAGGTTT +
Preference number: 5 (lower is better)
Translates to: FPGWEASSYTILTKGASLGGQLY*CRSHRF
Trigger: AAACCTGTGTGATCGGCACAAGTACAGCTGCCCACC...CAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGGATGCCTCCCACCCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS-3UTR CAA 90 bp GTATTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTCAAAGCTCCGAGGGCTaGGTTGATTCCACGGTGCTT +
Preference number: 5 (lower is better)
Translates to: VLKQSGVKIKPLQGLAPCQSSEG*VDSTVL
Trigger: AAGCACCGTGGAATCAACCAAGCCCTCGGAGCTTTG...ACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp ATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCCAACACCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 5 (lower is better)
Translates to: IIFWPTLHITKATGCSPTPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...TGTTGGAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp TCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTCCCCTCTGGCTGGTCTaGGGGCTGTTATTCACCTTG +
Preference number: 5 (lower is better)
Translates to: SEKDIKQSMASSMSTILAPLWLV*GLLFTL
Trigger: CAAGGTGAATAACAGCCCCAAGACCAGCCAGAGGGG...AGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525895.5
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp AGGTTAGGAGGACTAACAGGCTACGGCGTGACAAGGTGGCCTCAGCACAGTCTGCAAAGGGGTCAAGACTaGAAGCAGTTTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: RLGGLTGYGVTRWPQHSLQRGQD*KQFLQV
Trigger: CACTTGCAAAAACTGCTTCAAGTCTTGACCCCTTTG...CAGACTGTGCTGAGGCCACCTTGTCACGCCGTAGCCTGTTAGTCCTCCTAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GTGCATCAGATCCCCCTTGTCAGGCAAAGCTCCGAGGGCTTGGTTGATTCCACGTCCAGTTACACCATTTaGACCAAAGGAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: VHQIPLVRQSSEGLVDSTSSYTI*TKGASL
Trigger: CAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGGA...CGTGGAATCAACCAAGCCCTCGGAGCTTTGCCTGACAAGGGGGATCTGATGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528488.5
CDS TCA 90 bp CTCCTTCCTAGTGGCTGCGAGGGCTTGGTTGATTCCACGGTGCTTTaGGAGAGCCATGAGGAATCCATAGAAGGTCAGTCTCTGAACATT +
Preference number: 5 (lower is better)
Translates to: LLPSGCEGLVDSTVL*ESHEESIEGQSLNI
Trigger: AATGTTCAGAGACTGACCTTCTATGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAACCAAGCCCTCGCAGCCACTAGGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526827.1
CDS TCA 90 bp GGCATGAGAACCATGGAGCCGACCGGTTCTGGCAGCCTCTCCATTTaGCAAGCAAAGCCGAAGACGTGTGGCCTTTCATATATCTTACAT +
Preference number: 5 (lower is better)
Translates to: GMRTMEPTGSGSLSI*QAKPKTCGLSYILH
Trigger: ATGTAAGATATATGAAAGGCCACACGTCTTCGGCTTTGCTTGTCAAATGGAGAGGCTGCCAGAACCGGTCGGCTCCATGGTTCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS TCA 90 bp CACAGACAGGCCAGATACAGTGTTCTGGGACAACACACCATTGTCTaGATCCAGAGAGCATCATGGCTACAGTGGACGAGAGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: HRQARYSVLGQHTIV*IQRASWLQWTRVGS
Trigger: TGAGCCTACTCTCGTCCACTGTAGCCATGATGCTCTCTGGATTCAGACAATGGTGTGTTGTCCCAGAACACTGTATCTGGCCTGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533124.5
CDS TCA 90 bp GCTGAGTTGGTTTCAAGAGTCCAGGAGACGTACCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAATCAGGACACAGTAATTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: AELVSRVQETYLAAF*VSSSGKSGHSNCSK
Trigger: TTTGCTGCAATTACTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGTACGTCTCCTGGACTCTTGAAACCAACTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532840.5
CDS GCA 90 bp GGCTTTGGAGTCAGCCTTCAGGTCTGGTCTCCACCACTTATGAGCTaGATGACTGGCTACTACTTCTGTGAGCTTGTCTCTGAAAGGACT +
Preference number: 5 (lower is better)
Translates to: GFGVSLQVWSPPLMS*MTGYYFCELVSERT
Trigger: AGTCCTTTCAGAGACAAGCTCACAGAAGTAGTAGCCAGTCATGCAGCTCATAAGTGGTGGAGACCAGACCTGAAGGCTGACTCCAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529980.5
CDS-3UTR CAA 90 bp GTGAAATCATCTTCTGGCCCACCCTTCATATTACCAAGGCTACTGGCTGTTCTCACTGTGTTGGGGTTCTaGCCTGACAGCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VKSSSGPPFILPRLLAVLTVLGF*PDSRSS
Trigger: TGAGGACCTGCTGTCAGGCAAGAACCCCAACACAGT...GAGAACAGCCAGTAGCCTTGGTAATATGAAGGGTGGGCCAGAAGATGATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp ACCAAGGCTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACAAAGGGGTCAAGACTaGAAGCAGTTTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: TKATGCSPTGHSGYVLLVQRGQD*KQFLQV
Trigger: CACTTGCAAAAACTGCTTCAAGTCTTGACCCCTTTG...TACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAGCCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS TCA 90 bp AGTTGGTTTCAAGAGTCCAGGAGACGTACCTGGCTGCTTTCTGAGTaGGCTCCAGCGGGAAATCAGGACACAGTAATTGCAGCAAACAGT +
Preference number: 5 (lower is better)
Translates to: SWFQESRRRTWLLSE*APAGNQDTVIAANS
Trigger: ACTGTTTGCTGCAATTACTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGTACGTCTCCTGGACTCTTGAAACCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532840.5
CDS-3UTR CAA 90 bp CTACTGGCTGTTCTCCAACAGGCCACAGCGGTTATGTCCTCCTGGTACTTGCGTCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: LLAVLQQATAVMSSWYLRPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...ACGCAAGTACCAGGAGGACATAACCGCTGTGGCCTGTTGGAGAACAGCCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
CDS-3UTR CAA 90 bp CAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGTCTGAGCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: QSGVKIKPLQGLAPCWSEPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...CTCAGACCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp GGACCCTTTGGACTCCTCAAGTCTCCGACTCGTCTGTCTCTTCAGTGGAGCCATCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: GPFGLLKSPTRLSLQWSHPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...ATGGCTCCACTGAAGAGACAGACGAGTCGGAGACTTGAGGAGTCCAAAGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395460.6
ENST00000527784.5
ENST00000528488.5
CDS-3UTR CAA 90 bp TTGAAACAAAGTGGTGTCAAAATAAAGCCCCTGCAGGGCCTGGCTCCCTGTTGGAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: LKQSGVKIKPLQGLAPCWSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...CCAACAGGGAGCCAGGCCCTGCAGGGGCTTTATTTTGACACCACTTTGTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378618.6
CDS-3UTR CAA 90 bp GCTGGCTCAGAAGAGACTGCTCTTAAGAGGTTAGGAGGACTAACAGGCTACGGCCAAAGGGGTCAAGACTaGAAGCAGTTTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: AGSEETALKRLGGLTGYGQRGQD*KQFLQV
Trigger: CACTTGCAAAAACTGCTTCAAGTCTTGACCCCTTTG...GCCGTAGCCTGTTAGTCCTCCTAACCTCTTAAGAGCAGTCTCTTCTGAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278460.12
ENST00000378615.7
ENST00000395460.6
ENST00000525895.5
CDS-3UTR CAA 90 bp GAGCACAATCCTGGCTGCTTTCTGAGTGAGCTCCAGCGGGAAATCAGGACACAGGGCTTGTCAGTTCACTaGTCTGTTTATTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: EHNPGCFLSELQREIRTQGLSVH*SVYSVK
Trigger: CTTCACTGAATAAACAGACAAGTGAACTGACAAGCC...CTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGGATTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS TCA 90 bp CATGAGCACAATCCTGAAGGGGAAAGAGAGAATCTGGCTGCTTTCTaGGTGAGCTCCAGCGGGAAATCAGGACACAGTAATTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: HEHNPEGERENLAAF*VSSSGKSGHSNCSK
Trigger: TTTGCTGCAATTACTGTGTCCTGATTTCCCGCTGGAGCTCACTCAGAAAGCAGCCAGATTCTCTCTTTCCCCTTCAGGATTGTGCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534249.5
CDS-3UTR CAA 90 bp AAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAATCCTGGCTGCTTTCAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: KDIKQSMASSMSTILAAFSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...GAAAGCAGCCAGGATTGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000525895.5
CDS-3UTR CAA 90 bp CCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGTGGAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PTVRKHLQKARKNDTLLWSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...CCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS GCA 90 bp ACTGTTAAAACTTTCCGAAAACTCTTGGAGGCCAGTTCCTCTGAGTaGTTCCCACCTTCCACAGGTACACACAGAGGACATCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: TVKTFRKLLEASSSE*FPPSTGTHRGHLNQ
Trigger: CTGATTCAGATGTCCTCTGTGTGTACCTGTGGAAGGTGGGAAGCACTCAGAGGAACTGGCCTCCAAGAGTTTTCGGAAAGTTTTAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527268.5
CDS GCA 90 bp ACTATTCATGAGACATCACTGGACAAACTAGCTGCACCAAAGGCATaGTCCAAAACATGTTTGGGCGGCCCACAACCAACCTACCAAAAC +
Preference number: 5 (lower is better)
Translates to: TIHETSLDKLAAPKA*SKTCLGGPQPTYQN
Trigger: GTTTTGGTAGGTTGGTTGTGGGCCGCCCAAACATGTTTTGGAGCATGCCTTTGGTGCAGCTAGTTTGTCCAGTGATGTCTCATGAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531648.5
CDS-3UTR CAA 90 bp GTCTGTCTCTTCAGTGGAGCCATCACTCTCTCCATCCACTTTTCGGGAATGATGCAAAGGGGTCAAGACTaGAAGCAGTTTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: VCLFSGAITLSIHFSGMMQRGQD*KQFLQV
Trigger: CACTTGCAAAAACTGCTTCAAGTCTTGACCCCTTTG...CATCATTCCCGAAAAGTGGATGGAGAGAGTGATGGCTCCACTGAAGAGACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395460.6
ENST00000525895.5
CDS TCA 90 bp TATTTATTCCATCTGATTCCAGAGAGACTTAAGGGTGCAGCTGTGTaGATTGGGGAGCAGAGTGGGAGTGTGACAAAGGACTGGTGTATG +
Preference number: 5 (lower is better)
Translates to: YLFHLIPERLKGAAV*IGEQSGSVTKDWCM
Trigger: CATACACCAGTCCTTTGTCACACTCCCACTCTGCTCCCCAATTCACACAGCTGCACCCTTAAGTCTCTCTGGAATCAGATGGAATAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529980.5
CDS GCA 90 bp ATGTTTGGGCGGCCCACAACCAACCTACCAAAACTAAACATTCACTaGCACTACCTAATCAGCATTGTCCTGCTCTGTTCCTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: MFGRPTTNLPKLNIH*HYLISIVLLCSSSI
Trigger: GATACTTGAGGAACAGAGCAGGACAATGCTGATTAGGTAGTGGCAGTGAATGTTTAGTTTTGGTAGGTTGGTTGTGGGCCGCCCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531648.5
CDS CCA 90 bp CAGGAGGTCCAGCTTTATTCAGTGAAGAACCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTTTCTAGCAGCTGGCACACTGCATCC +
Preference number: 5 (lower is better)
Translates to: QEVQLYSVKNLAIPY*LISSLFSSSWHTAS
Trigger: GGATGCAGTGTGCCAGCTGCTAGAAAACAGGGAAGATATTAGCCAATATGGAATTGCCAGGTTCTTCACTGAATAAAGCTGGACCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525279.5
CDS CCA 90 bp CAGGGAACATCAGAAGTGCAGGGCCTGTCTTTTGAAGATAAAGTCTaGCTAGATCAGCTTTTCAGTGAAAGAAGCCAAAGTCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QGTSEVQGLSFEDKV*LDQLFSERSQSLQP
Trigger: TGGCTGCAGACTTTGGCTTCTTTCACTGAAAAGCTGATCTAGCCAGACTTTATCTTCAAAAGACAGGCCCTGCACTTCTGATGTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533124.5
CDS CCA 90 bp GTTGAGTTCCTTCTTGAGGCCTCAGGTACTGGGCTGAAAAGGATATaGTCCAGGCTAAGCCCAAAGGTCAGACATTACCTAATTTTGTGT +
Preference number: 5 (lower is better)
Translates to: VEFLLEASGTGLKRI*SRLSPKVRHYLILC
Trigger: ACACAAAATTAGGTAATGTCTGACCTTTGGGCTTAGCCTGGACCATATCCTTTTCAGCCCAGTACCTGAGGCCTCAAGAAGGAACTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624693.1
CDS-3UTR CAA 90 bp GGTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: GGLDEAEFSKENVCSLAYPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...GTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR CAA 90 bp GGTGGCTTGGACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACGAGTTCAAGACCAGTTaGAGCAATAAAATGAGACCC +
Preference number: 5 (lower is better)
Translates to: GGLDEAEFSKENVCSLAYEFKTS*SNKMRP
Trigger: GGGTCTCATTTTATTGCTCAAACTGGTCTTGAACTC...GTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGTCCAAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS CCA 90 bp AGGAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAAAAGAATTTaGGAAGACTTACCGCCATTTTTGCCCACAGTTCGGAAGCATCTC +
Preference number: 5 (lower is better)
Translates to: RKEERKEGRKEGKRI*EDLPPFLPTVRKHL
Trigger: GAGATGCTTCCGAACTGTGGGCAAAAATGGCGGTAAGTCTTCCCAAATTCTTTTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522712.6
CDS CCA 90 bp AGGATCATTTCGCTTCCCTTTGGAAATGCAGAATGTATTATGTTTTaGGGCACATCCCAAATAGACCCCTCTCCCACTGCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RIISLPFGNAECIMF*GTSQIDPSPTASFF
Trigger: GAAGAAACTGGCAGTGGGAGAGGGGTCTATTTGGGATGTGCCCCAAAACATAATACATTCTGCATTTCCAAAGGGAAGCGAAATGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532840.5
CDS-3UTR CAA 90 bp TTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATTGCCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: LPTVRKHLQKARKNDTLLPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...CAATAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525279.5
ENST00000526424.5
ENST00000527667.5
ENST00000532633.5
CDS-3UTR CAA 90 bp AAGAGGAAATCTGAAAAAGACATCAAGCAGTCCATGGCATCGTCCATGAGCACAAGCAAATCGCCATTTTaGCCCACAGTTCGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: KRKSEKDIKQSMASSMSTSKSPF*PTVRKH
Trigger: ATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCT...TGTGCTCATGGACGATGCCATGGACTGCTTGATGTCTTTTTCAGATTTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000525895.5
CDS-3UTR CAA 90 bp TTTTTGCCCACAGTTCGGAAGCATCTCCAGAAGGCCCGTAAAAATGATACCCTATCCAGTTACACCATTTaGACCAAAGGAGCTTCACTG +
Preference number: 5 (lower is better)
Translates to: FLPTVRKHLQKARKNDTLSSYTI*TKGASL
Trigger: CAGTGAAGCTCCTTTGGTCAAAATGGTGTAACTGGA...TAGGGTATCATTTTTACGGGCCTTCTGGAGATGCTTCCGAACTGTGGGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532633.5
CDS-3UTR CAA 90 bp ACGAAGCTGAATTCTCGAAAGAGAATGTGTGTTCCCTGGCATACACTGTTAAAATGGCAGCCTCTCCATTaGACAAGCAAAGCCGAAGAC +
Preference number: 5 (lower is better)
Translates to: TKLNSRKRMCVPWHTLLKWQPLH*TSKAED
Trigger: GTCTTCGGCTTTGCTTGTCAAATGGAGAGGCTGCCA...TTTTAACAGTGTATGCCAGGGAACACACATTCTCTTTCGAGAATTCAGCTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526424.5
CDS-3UTR CAA 90 bp TTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAACCTGGCAATTCCATATaGGCTAATATCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: FHGQQIAIFAHSSEASPEPGNSI*ANIFPV
Trigger: AACAGGGAAGATATTAGCCAATATGGAATTGCCAGG...TTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525279.5
ENST00000527667.5
CDS-3UTR CAA 90 bp TTTCATGGTCAGCAAATCGCCATTTTTGCCCACAGTTCGGAAGCATCTCCAGAAAAATGGTATAGAAACTaGACCCGTAGGCTTGTCAGT +
Preference number: 5 (lower is better)
Translates to: FHGQQIAIFAHSSEASPEKWYRN*TRRLVS
Trigger: ACTGACAAGCCTACGGGTCAAGTTTCTATACCATTT...TTCTGGAGATGCTTCCGAACTGTGGGCAAAAATGGCGATTTGCTGACCATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS CCA 90 bp GTTCACTTGTCTGTTTATTCAGTGAAGAACCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTTTCTAGCAGCTGGCACACTGCATCC +
Preference number: 5 (lower is better)
Translates to: VHLSVYSVKNLAIPY*LISSLFSSSWHTAS
Trigger: GGATGCAGTGTGCCAGCTGCTAGAAAACAGGGAAGATATTAGCCAATATGGAATTGCCAGGTTCTTCACTGAATAAACAGACAAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS CCA 90 bp TCATGGTCAGCAAATTATTCAGTGAAGAACCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTTTCTAGCAGCTGGCACACTGCATCC +
Preference number: 5 (lower is better)
Translates to: SWSANYSVKNLAIPY*LISSLFSSSWHTAS
Trigger: GGATGCAGTGTGCCAGCTGCTAGAAAACAGGGAAGATATTAGCCAATATGGAATTGCCAGGTTCTTCACTGAATAATTTGCTGACCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527784.5
CDS TCA 90 bp AAGGAGCCTCAAGAGTGCTGGTACAGATTAAATGGTATAGAAACTTaGCCCGTAGGCTTGTCAGTTCACTTGTCTGTTTATTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KEPQECWYRLNGIET*PVGLSVHLSVYSVK
Trigger: CTTCACTGAATAAACAGACAAGTGAACTGACAAGCCTACGGGTCAAGTTTCTATACCATTTAATCTGTACCAGCACTCTTGAGGCTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527667.5
CDS CCA 90 bp CATTCATGTACTTACTATTCAGTGAAGAACCTGGCAATTCCATATTaGCTAATATCTTCCCTGTTTTCTAGCAGCTGGCACACTGCATCC +
Preference number: 5 (lower is better)
Translates to: HSCTYYSVKNLAIPY*LISSLFSSSWHTAS
Trigger: GGATGCAGTGTGCCAGCTGCTAGAAAACAGGGAAGAT