RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF45 (Homo sapiens)

Ensembl gene IDs: ENSG00000174370

Ensembl transcript IDs: ENST00000310799.9, ENST00000524878.1

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCGCGCTGTCCCTGCCTGGCTCTGCGTTTCACTGAAAGCCCCTTaGCCTGATTCTAGCCCTCAGCCCCCACGCACAGCCACCGGCGAC +
Preference number: 1 (lower is better)
Translates to: IRAVPAWLCVSLKAP*PDSSPQPPRTATGD
Trigger: GTCGCCGGTGGCTGTGCGTGGGGGCTGAGGGCTAGAATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGACAGCGCGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp CTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGAAGAGCTGTGCATaGCTGGAGCCCCTGGGAGCCCATGACAGCCAGGAGCATCCTGGG +
Preference number: 1 (lower is better)
Translates to: LSGAFCFEKRRKSCA*LEPLGAHDSQEHPG
Trigger: CCCAGGATGCTCCTGGCTGTCATGGGCTCCCAGGGGCTCCAGGCATGCACAGCTCTTCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp CTGGGGCATTCTGCTTCGAGAAGAGGCGGAAGAGCTGTGCATGCCTaGAGCCCCTGGGAGCCCATGACAGCCAGGAGCATCCTGGGCATA +
Preference number: 1 (lower is better)
Translates to: LGHSASRRGGRAVHA*SPWEPMTARSILGI
Trigger: TATGCCCAGGATGCTCCTGGCTGTCATGGGCTCCCAGGGGCTCCAGGCATGCACAGCTCTTCCGCCTCTTCTCGAAGCAGAATGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp CGTCCGCCTTCCCAGCAGCTCCCTTCCGCAGAGTGCTTAACAGCTTaGCAATCAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGGATG +
Preference number: 1 (lower is better)
Translates to: RPPSQQLPSAECLTA*QSENAVCTDSSAGM
Trigger: CATCCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAGCTGCTGGGAAGGCGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp ACTGTTCTGAGATCCGCGCTGTCCCTGCCTGGCTCTGCGTTTCACTaGAAGCCCCTTGCCCTGATTCTAGCCCTCAGCCCCCACGCACAG +
Preference number: 1 (lower is better)
Translates to: TVLRSALSLPGSAFH*KPLALILALSPHAQ
Trigger: CTGTGCGTGGGGGCTGAGGGCTAGAATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGACAGCGCGGATCTCAGAACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp GGAGGACTATCGCACTGCCCAAGACACTGTTCTCTGCAGCAGGTTTaGACAGGGTGCCAGTTAGGGAGGAGAAGGCAGCGAGGAACCCCG +
Preference number: 1 (lower is better)
Translates to: GGLSHCPRHCSLQQV*TGCQLGRRRQRGTP
Trigger: CGGGGTTCCTCGCTGCCTTCTCCTCCCTAACTGGCACCCTGTGCAAACCTGCTGCAGAGAACAGTGTCTTGGGCAGTGCGATAGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp CCTGAGATGCCTCGTCCGCCTTCCCAGCAGCTCCCTTCCGCAGAGTaGTTAACAGCTTGGCAATCAGAGAACGCTGTGTGCACGGACAGC +
Preference number: 1 (lower is better)
Translates to: PEMPRPPSQQLPSAE*LTAWQSENAVCTDS
Trigger: GCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAGCTGCTGGGAAGGCGGACGAGGCATCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp ATGAACAGCCAATACTCTCTCGCTCCTCTGGGCTACCCGAGGCTCTaGAGGCCCCAAACTCACCTTCTGTTGCCCCATTCAGCACCAGCC +
Preference number: 1 (lower is better)
Translates to: MNSQYSLAPLGYPRL*RPQTHLLLPHSAPA
Trigger: GGCTGGTGCTGAATGGGGCAACAGAAGGTGAGTTTGGGGCCTGCAGAGCCTCGGGTAGCCCAGAGGAGCGAGAGAGTATTGGCTGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp CTTGCCCAGGTCAGGATGTCTCCGAGCAAAACGAGGGACACTGAGTaGCTCTGGGAGCAACCTCAGTCCTGCATCCTCGTCAACACCCTG +
Preference number: 1 (lower is better)
Translates to: LAQVRMSPSKTRDTE*LWEQPQSCILVNTL
Trigger: CAGGGTGTTGACGAGGATGCAGGACTGAGGTTGCTCCCAGAGTCACTCAGTGTCCCTCGTTTTGCTCGGAGACATCCTGACCTGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp TCTGACAAAGACTGTTCTGAGATCCGCGCTGTCCCTGCCTGGCTCTaGGTTTCACTGAAAGCCCCTTGCCCTGATTCTAGCCCTCAGCCC +
Preference number: 1 (lower is better)
Translates to: SDKDCSEIRAVPAWL*VSLKAPCPDSSPQP
Trigger: GGGCTGAGGGCTAGAATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGACAGCGCGGATCTCAGAACAGTCTTTGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp GCGTGGGTTCTGAAGTCAGGCCGCTGTCAGTTCAAACCCAGGTTCTaGTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCTCCCTGCT +
Preference number: 1 (lower is better)
Translates to: AWVLKSGRCQFKPRF*CLQAMWSLASSLPA
Trigger: AGCAGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGACAGCGGCCTGACTTCAGAACCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp CTTGGCAATCAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGGATaGAGTGTCCCATCTGACAAAGACTGTTCTGAGATCCGCGCTGTC +
Preference number: 1 (lower is better)
Translates to: LGNQRTLCARTAPRG*SVPSDKDCSEIRAV
Trigger: GACAGCGCGGATCTCAGAACAGTCTTTGTCAGATGGGACACTTCATCCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp AGAGCTTGCCCAGGTCAGGATGTCTCCGAGCAAAACGAGGGACACTaGGTGACTCTGGGAGCAACCTCAGTCCTGCATCCTCGTCAACAC +
Preference number: 1 (lower is better)
Translates to: RACPGQDVSEQNEGH*VTLGATSVLHPRQH
Trigger: GTGTTGACGAGGATGCAGGACTGAGGTTGCTCCCAGAGTCACTCAGTGTCCCTCGTTTTGCTCGGAGACATCCTGACCTGGGCAAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp TGGGTTCTGAAGTCAGGCCGCTGTCAGTTCAAACCCAGGTTCTGCTaGTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCTCCCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: WVLKSGRCQFKPRFC*LQAMWSLASSLPAL
Trigger: CAGAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGACAGCGGCCTGACTTCAGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp GTCCCATCTGACAAAGACTGTTCTGAGATCCGCGCTGTCCCTGCCTaGCTCTGCGTTTCACTGAAAGCCCCTTGCCCTGATTCTAGCCCT +
Preference number: 1 (lower is better)
Translates to: VPSDKDCSEIRAVPA*LCVSLKAPCPDSSP
Trigger: AGGGCTAGAATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGACAGCGCGGATCTCAGAACAGTCTTTGTCAGATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp GGCCGCTGTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTaGTCTCTGGCAAGTTCCCTCCCTGCTCTGAATCTCAGTCTCCTG +
Preference number: 1 (lower is better)
Translates to: GRCQFKPRFCCLQAM*SLASSLPALNLSLL
Trigger: CAGGAGACTGAGATTCAGAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGACAGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp AAAAATCAGCACCTGGGGCCTCATTCCACTCATCTCGCACACCTCTaGAGTCCCTTCCACGATGCCCTCACCGCTGGTAATCAGCATCCA +
Preference number: 1 (lower is better)
Translates to: KNQHLGPHSTHLAHL*SPFHDALTAGNQHP
Trigger: TGGATGCTGATTACCAGCGGTGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCCCCAGGTGCTGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp AGTGACTCTGGGAGCAACCTCAGTCCTGCATCCTCGTCAACACCCTaGCTGTTCTCAACAATAATCCCACCCATGTGGGGAGCTCCCCTT +
Preference number: 1 (lower is better)
Translates to: SDSGSNLSPASSSTP*LFSTIIPPMWGAPL
Trigger: AAGGGGAGCTCCCCACATGGGTGGGATTATTGTTGAGAACAGTCAGGGTGTTGACGAGGATGCAGGACTGAGGTTGCTCCCAGAGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp CAGTGGCTCACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATaGGAGCCTGGCAGGTTGGGAAACTCAGTCACAAGCTCACGGGCC +
Preference number: 1 (lower is better)
Translates to: QWLTREGRKIFILSK*EPGRLGNSVTSSRA
Trigger: GGCCCGTGAGCTTGTGACTGAGTTTCCCAACCTGCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp CACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTaGCAGGTTGGGAAACTCAGTCACAAGCTCACGGGCCTGCTCCAT +
Preference number: 1 (lower is better)
Translates to: HQGGQKNIHPKQMGA*QVGKLSHKLTGLLH
Trigger: ATGGAGCAGGCCCGTGAGCTTGTGACTGAGTTTCCCAACCTGCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp AAGCCAAGCGAGGTATTAAAGGGAAGGGGTGTAAGGAGTGGCGAGTaGCCCACAGTGGCTCACCAGGGAGGGCAGAAAAATATTCATCCT +
Preference number: 1 (lower is better)
Translates to: KPSEVLKGRGVRSGE*PTVAHQGGQKNIHP
Trigger: AGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCACTGTGGGCCACTCGCCACTCCTTACACCCCTTCCCTTTAATACCTCGCTTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp AAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATaGTCCCTAAAGAGCTTGCCCAGGTCAGGATGTCTCCGAGCAAAA +
Preference number: 1 (lower is better)
Translates to: KRVQRPWRMRHRQER*SLKSLPRSGCLRAK
Trigger: TTTTGCTCGGAGACATCCTGACCTGGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp ATAGGATGTGGCCAGGAGAGTCAGGGTTATGATTCAGAACCAAGATaGCTGGACTCAAATGGGTGTGAAGTAGGAGGGTGGGAAAGCGTG +
Preference number: 1 (lower is better)
Translates to: IGCGQESQGYDSEPR*LDSNGCEVGGWESV
Trigger: CACGCTTTCCCACCCTCCTACTTCACACCCATTTGAGTCCAGCCATCTTGGTTCTGAATCATAACCCTGACTCTCCTGGCCACATCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 90 bp GTCAGACATCTCTCCCCATTGAGACCATTTTTACTGTTGGTGAACTaGAGGACTATCGCACTGCCCAAGACACTGTTCTCTGCAGCAGGT +
Preference number: 1 (lower is better)
Translates to: VRHLSPLRPFLLLVN*RTIALPKTLFSAAG
Trigger: ACCTGCTGCAGAGAACAGTGTCTTGGGCAGTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATGGTCTCAATGGGGAGAGATGTCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp GTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCTCCCTaGTCTGAATCTCAGTCTCCTGATCTGAATAATGGACACATTACA +
Preference number: 1 (lower is better)
Translates to: VLLLASHVVSGKFPP*SESQSPDLNNGHIT
Trigger: TGTAATGTGTCCATTATTCAGATCAGGAGACTGAGATTCAGAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp TCTCTGGCAAGTTCCCTCCCTGCTCTGAATCTCAGTCTCCTGATCTaGATAATGGACACATTACACTTATTCCACAGTGTTGCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: SLASSLPALNLSLLI*IMDTLHLFHSVAEL
Trigger: CAGCTCAGCAACACTGTGGAATAAGTGTAATGTGTCCATTATTCAGATCAGGAGACTGAGATTCAGAGCAGGGAGGGAACTTGCCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 90 bp TTCACAGTCGGTGTTTCTGTGTCTACAATGCCAGAATCCTGGAAATaGGTTAACCCAAATTTGTGTGCCTTCTGGCAAGCCCAACTATCC +
Preference number: 1 (lower is better)
Translates to: FTVGVSVSTMPESWK*VNPNLCAFWQAQLS
Trigger: GGATAGTTGGGCTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTGTAGACACAGAAACACCGACTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp CCTGAGCCAACACAGGAGTTGAAAGAGCCCAACAGAGGTGCAAACTaGCATTATGATTCCATGATAATAATTCCACATACTAGGAATACC +
Preference number: 1 (lower is better)
Translates to: PEPTQELKEPNRGAN*HYDSMIIIPHTRNT
Trigger: GGTATTCCTAGTATGTGGAATTATTATCATGGAATCATAATGGCAGTTTGCACCTCTGTTGGGCTCTTTCAACTCCTGTGTTGGCTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 90 bp TTTCTCCAAAGAATTGAACTCCCCAAGCAAAATGCCAGATCTGCCTaGGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTT +
Preference number: 1 (lower is better)
Translates to: FLQRIELPKQNARSA*APFRLEFCLPLKIL
Trigger: AAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCAGATCTGGCATTTTGCTTGGGGAGTTCAATTCTTTGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp TCGTCCGCCTTCCCAGCAGCTCCCTTCCGCAGAGTGCTTAACAGCTaGGCAATCAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGGAT +
Preference number: 2 (lower is better)
Translates to: SSAFPAAPFRRVLNS*AIRERCVHGQLRGD
Trigger: ATCCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAGCTGCTGGGAAGGCGGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGTCATAGCAGCCGTCTaGATGGGGGAGGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIVIAAV*MGEGAG
Trigger: CCCAGCCCCCTCCCCCATGCAGACGGCTGCTATGAC...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTTCAGAGAACGCTGTGTaGACGGACAGCTCCGCGGGG +
Preference number: 2 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFSENAV*TDSSAG
Trigger: CCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGA...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTGAAGGACTCAGCGCTTaGAGTCAGACATCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFEGLSA*SQTSLP
Trigger: GGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTC...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTAGCCAACACAGGAGTTaGAAGAGCCCAACAGAGGTG +
Preference number: 2 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFSQHRS*KSPTEV
Trigger: CACCTCTGTTGGGCTCTTTCAACTCCTGTGTTGGCT...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp CCATGGAGAATGCGGCACAGACAGGAAAGATGCTCCCTAAAGAGCTaGCCCAGGTCAGGATGTCTCCGAGCAAAACGAGGGACACTGAGT +
Preference number: 2 (lower is better)
Translates to: PWRMRHRQERCSLKS*PRSGCLRAKRGTLS
Trigger: ACTCAGTGTCCCTCGTTTTGCTCGGAGACATCCTGACCTGGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCTGTGCCGCATTCTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp GTTCTGAAGTCAGGCCGCTGTCAGTTCAAACCCAGGTTCTGCTGCTaGCAAGCCATGTGGTCTCTGGCAAGTTCCCTCCCTGCTCTGAAT +
Preference number: 2 (lower is better)
Translates to: VLKSGRCQFKPRFCC*QAMWSLASSLPALN
Trigger: ATTCAGAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGACAGCGGCCTGACTTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp TTTCCGTGCCCTTTTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGAGGCGGAAGAGCTGTaGATGCCTGGAGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: FPCPFHGHDFSYIFCEIQEAEEL*MPGAPG
Trigger: CCCAGGGGCTCCAGGCATGCACAGCTCTTCCGCCTC...CTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGGCACGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATCTCACCCACCTGAGATaGCTCGTCCGCCTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: QKQKECKGHGECGTDRKDLTHLR*LVRLPS
Trigger: GCTGGGAAGGCGGACGAGGCATCTCAGGTGGGTGAG...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTAATTTGTGTGCCTTCTaGCAAGCCCAACTATCCAAC +
Preference number: 2 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFNLCAF*QAQLSN
Trigger: GTTGGATAGTTGGGCTTGCCAGAAGGCACACAAATT...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp TTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGAGGATGCATGTGCAGGGATGGTGGGTCTaGGCAACGCTGATGCAGCGG +
Preference number: 2 (lower is better)
Translates to: FMAMTFHTSSVRSRRMHVQGWWV*ATLMQR
Trigger: CCGCTGCATCAGCGTTGCTCAGACCCACCATCCCTG...CACATGCATCCTCCTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATAAACCTGGGCGTCAGTaGCAGCTCCCCAGGGATGGT +
Preference number: 2 (lower is better)
Translates to: QKQKECKGHGECGTDRKDKPGRQ*QLPRDG
Trigger: ACCATCCCTGGGGAGCTGTCACTGACGCCCAGGTTT...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp GTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTGGAGGACTATCGCACTaGCCAAGACACTGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: VSSNPGSAACKPCGLWQVGGLSH*PRHCSL
Trigger: CAGAGAACAGTGTCTTGGGCAGTGCGATAGTCCTCC...AACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATCCTCCAGCCCTCCTCTaGAAGGACTCAGCGCTTGCA +
Preference number: 2 (lower is better)
Translates to: QKQKECKGHGECGTDRKDPPALL*KDSALA
Trigger: TGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGAGG...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGAGAGCTGTGCATGCCTaGAGCCCCTGGGAGCCCATG +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKRAVHA*SPWEPM
Trigger: CATGGGCTCCCAGGGGCTCCAGGCATGCACAGCTCT...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp CTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATaGAGACCATTTTTACTGTTGGTGAACTGGAGGACTATCGCACTG +
Preference number: 2 (lower is better)
Translates to: LLWKDSALAVRHLSP*RPFLLLVNWRTIAL
Trigger: CAGTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp CAAGCTCACGGGCCTGCTCCATACGTACAGTCCTCAATAATGGGCTaGGTCTGTGATGCAAAGCTACCTGAAAGGCACTCACCTATCACT +
Preference number: 2 (lower is better)
Translates to: QAHGPAPYVQSSIMG*VCDAKLPERHSPIT
Trigger: AGTGATAGGTGAGTGCCTTTCAGGTAGCTTTGCATCACAGACCAAGCCCATTATTGAGGACTGTACGTATGGAGCAGGCCCGTGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp GAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTGGCAGGTaGGGAAACTCAGTCACAAGCTCACGGGCCTGCTCCATACGTACA +
Preference number: 2 (lower is better)
Translates to: EGRKIFILSKWEPGR*GNSVTSSRACSIRT
Trigger: TGTACGTATGGAGCAGGCCCGTGAGCTTGTGACTGAGTTTCCCAACCTGCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 90 bp GCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTACTGTaGGTGAACTGGAGGACTATCGCACTGCCCAAGACACTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: ALAVRHLSPLRPFLL*VNWRTIALPKTLFS
Trigger: AGAGAACAGTGTCTTGGGCAGTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp TTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGAGGATGCATGTGAGGCACAGGATGTACTaGGAAGGGGAAACCTGGGCG +
Preference number: 2 (lower is better)
Translates to: FMAMTFHTSSVRSRRMHVRHRMY*EGETWA
Trigger: CGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCT...CACATGCATCCTCCTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp CTAGCCACCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGATAAAAATCAGCACCTaGGGCCTCATTCCACTCATC +
Preference number: 2 (lower is better)
Translates to: LATLDSKGALSGAFCFEKIKIST*GLIPLI
Trigger: GATGAGTGGAATGAGGCCCCAGGTGCTGATTTTTAT...CTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGGTGGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp TTCCACATACTAGGAATACCGGGATTATTTCAGACCTTATATCTGCTCTTAACCCATGCCTGGAGCCCCTaGGAGCCCATGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: FHILGIPGLFQTLYLLLTHAWSP*EPMTAR
Trigger: CCTGGCTGTCATGGGCTCCCAGGGGCTCCAGGCATG...GGTTAAGAGCAGATATAAGGTCTGAAATAATCCCGGTATTCCTAGTATGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp GTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTGACATCTCTCCCCATTaGGACCATTTTTACTGTTGG +
Preference number: 2 (lower is better)
Translates to: VSSNPGSAACKPCGLWQVDISPH*DHFYCW
Trigger: CCAACAGTAAAAATGGTCTCAATGGGGAGAGATGTC...AACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp TTTCCGTGCCCTTTTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGGCTCTGCGTTTCACTaGAAGCCCCTTGCCCTGATT +
Preference number: 2 (lower is better)
Translates to: FPCPFHGHDFSYIFCEIQGSAFH*KPLALI
Trigger: AATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCC...CTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGGCACGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp AGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCAGCTGCTGCAGGCAATaGATTGATGACGTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: SSNPGSAACKPCGLWQVPSCCRQ*IDDVFK
Trigger: TTTAAACACGTCATCAATTCATTGCCTGCAGCAGCT...GGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGCAGGTTTGCACAGGGTaGCAGTTAGGGAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKQVCTG*QLGRRR
Trigger: CCTTCTCCTCCCTAACTGGCACCCTGTGCAAACCTG...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGGGACTCAAATGGGTGTaGAGTAGGAGGGTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKGLKWV*SRRVGK
Trigger: CTTTCCCACCCTCCTACTTCACACCCATTTGAGTCC...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGGAGCAACCTCAGTCCTaGATCCTCGTCAACACCCTG +
Preference number: 2 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKEQPQS*ILVNTL
Trigger: CAGGGTGTTGACGAGGATGCAGGACTGAGGTTGCTC...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGAAGCCATGTGGTCTCTaGCAAGTTCCCTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKKPCGL*QVPSLL
Trigger: GAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTT...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGGTGGAGCATAGGATGTaGCCAGGAGAGTCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKVEHRM*PGESGL
Trigger: TAACCCTGACTCTCCTGGCCACATCCTATGCTCCAC...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp TTCCACATACTAGGAATACCGGGATTATTTCAGACCTTATATCTGCTCTTAACCGTCCCTGCCTGGCTCTaGGTTTCACTGAAAGCCCCT +
Preference number: 2 (lower is better)
Translates to: FHILGIPGLFQTLYLLLTVPAWL*VSLKAP
Trigger: AGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGAC...GGTTAAGAGCAGATATAAGGTCTGAAATAATCCCGGTATTCCTAGTATGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR GCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGCACAGACAGGAAAGATaGTCCCTAAAGAGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMHRQER*SLKSLP
Trigger: GGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCTGTG...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGTTACTGTTGGTGAACTaGAGGACTATCGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKLLLVN*RTIALP
Trigger: GGGCAGTGCGATAGTCCTCCAGTTCACCAACAGTAA...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATGAGTGCTTAACAGCTTaGCAATCAGAGAACGCTGTG +
Preference number: 2 (lower is better)
Translates to: QKQKECKGHGECGTDRKDECLTA*QSENAV
Trigger: CACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTC...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGGGAGAGTCAGGGTTATaGTTCAGAACCAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMGESGL*FRTKMA
Trigger: AGCCATCTTGGTTCTGAATCATAACCCTGACTCTCC...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGGTGATAGGATTCTCCTaGGCCAACACAGGAGTTGAA +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKVIGFS*ANTGVE
Trigger: TTCAACTCCTGTGTTGGCTCAGGAGAATCCTATCAC...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGCATTTTTACTGTTGGTaGACTGGAGGACTATCGCAC +
Preference number: 2 (lower is better)
Translates to: QCQNPGNELTQICVPSGKHFYCW*TGGLSH
Trigger: GTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATG...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGTCCTCGTCAACACCCTaGCTGTTCTCAACAATAATC +
Preference number: 2 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMSSSTP*LFSTII
Trigger: GATTATTGTTGAGAACAGTCAGGGTGTTGACGAGGA...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR TCA 90 bp TTTCCGTGCCCTTTTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGATGGCAGAGATGTCATaGACATTAGGATTTCCACAA +
Preference number: 2 (lower is better)
Translates to: FPCPFHGHDFSYIFCEIQMAEMS*TLGFPQ
Trigger: TTGTGGAAATCCTAATGTTCATGACATCTCTGCCAT...CTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGGCACGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp GTCCCTGCCTGGCTCTGCGTTTCACTGAAAGCCCCTTaGCCTGATTCTAGCCCTCAGCCCCCACGCACAGCC +
Preference number: 3 (lower is better)
Translates to: VPAWLCVSLKAP*PDSSPQPPRTA
Trigger: GGCTGTGCGTGGGGGCTGAGGGCTAGAATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp GCCAAGCGAGGTATTAAAGGGAAGGGGTGTAAGGAGTaGCGAGTGGCCCACAGTGGCTCACCAGGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: AKRGIKGKGCKE*RVAHSGSPGRA
Trigger: TGCCCTCCCTGGTGAGCCACTGTGGGCCACTCGCCACTCCTTACACCCCTTCCCTTTAATACCTCGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp ACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTaGCAGCTCCCCAGGGATGGTGGGTCTGAGCAACGC +
Preference number: 3 (lower is better)
Translates to: TGCTEKGKPGRQ*QLPRDGGSEQR
Trigger: GCGTTGCTCAGACCCACCATCCCTGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp CACCTGGGGCCTCATTCCACTCATCTCGCACACCTCTaGAGTCCCTTCCACGATGCCCTCACCGCTGGTAAT +
Preference number: 3 (lower is better)
Translates to: HLGPHSTHLAHL*SPFHDALTAGN
Trigger: ATTACCAGCGGTGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCCCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp CCTCGTCCGCCTTCCCAGCAGCTCCCTTCCGCAGAGTaGTTAACAGCTTGGCAATCAGAGAACGCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: PRPPSQQLPSAE*LTAWQSENAVC
Trigger: GCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAGCTGCTGGGAAGGCGGACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CAA 90 bp GGCCTCATTCCACTCATCTCGCACACCTCTGCAGTCCCTTCCACGATGCCCTCAGGAAGGACTCAGCGCTaGCAGTCAGACATCTCTCCC +
Preference number: 3 (lower is better)
Translates to: GLIPLISHTSAVPSTMPSGRTQR*QSDISP
Trigger: GGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCC...TGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CAA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCATTCTCTGCAGCAGGTTaGCACAGGGTGCCAGTTAGG +
Preference number: 3 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPFSAAG*HRVPVR
Trigger: CCTAACTGGCACCCTGTGCAAACCTGCTGCAGAGAA...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp TCGCACTGCCCAAGACACTGTTCTCTGCAGCAGGTTTaGACAGGGTGCCAGTTAGGGAGGAGAAGGCAGCGA +
Preference number: 3 (lower is better)
Translates to: SHCPRHCSLQQV*TGCQLGRRRQR
Trigger: TCGCTGCCTTCTCCTCCCTAACTGGCACCCTGTGCAAACCTGCTGCAGAGAACAGTGTCTTGGGCAGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp GACTGTTCTGAGATCCGCGCTGTCCCTGCCTGGCTCTaGGTTTCACTGAAAGCCCCTTGCCCTGATTCTAGC +
Preference number: 3 (lower is better)
Translates to: DCSEIRAVPAWL*VSLKAPCPDSS
Trigger: GCTAGAATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGACAGCGCGGATCTCAGAACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp CAATACTCTCTCGCTCCTCTGGGCTACCCGAGGCTCTaGAGGCCCCAAACTCACCTTCTGTTGCCCCATTCA +
Preference number: 3 (lower is better)
Translates to: QYSLAPLGYPRL*RPQTHLLLPHS
Trigger: TGAATGGGGCAACAGAAGGTGAGTTTGGGGCCTGCAGAGCCTCGGGTAGCCCAGAGGAGCGAGAGAGTATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp TCCCAGCAGCTCCCTTCCGCAGAGTGCTTAACAGCTTaGCAATCAGAGAACGCTGTGTGCACGGACAGCTCC +
Preference number: 3 (lower is better)
Translates to: SQQLPSAECLTA*QSENAVCTDSS
Trigger: GGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAGCTGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp GTCAGGATGTCTCCGAGCAAAACGAGGGACACTGAGTaGCTCTGGGAGCAACCTCAGTCCTGCATCCTCGTC +
Preference number: 3 (lower is better)
Translates to: VRMSPSKTRDTE*LWEQPQSCILV
Trigger: GACGAGGATGCAGGACTGAGGTTGCTCCCAGAGTCACTCAGTGTCCCTCGTTTTGCTCGGAGACATCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp CCAGGTCAGGATGTCTCCGAGCAAAACGAGGGACACTaGGTGACTCTGGGAGCAACCTCAGTCCTGCATCCT +
Preference number: 3 (lower is better)
Translates to: PGQDVSEQNEGH*VTLGATSVLHP
Trigger: AGGATGCAGGACTGAGGTTGCTCCCAGAGTCACTCAGTGTCCCTCGTTTTGCTCGGAGACATCCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp GAGTGCTTAACAGCTTGGCAATCAGAGAACGCTGTGTaGACGGACAGCTCCGCGGGGATGAAGTGTCCCATC +
Preference number: 3 (lower is better)
Translates to: ECLTAWQSENAV*TDSSAGMKCPI
Trigger: GATGGGACACTTCATCCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp CAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGGATaGAGTGTCCCATCTGACAAAGACTGTTCTGAGATC +
Preference number: 3 (lower is better)
Translates to: QRTLCARTAPRG*SVPSDKDCSEI
Trigger: GATCTCAGAACAGTCTTTGTCAGATGGGACACTTCATCCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp ACCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTaGTTCGAGAAGAGGCGGAAGAGCTGTGCATGCCTG +
Preference number: 3 (lower is better)
Translates to: TLDSKGALSGAF*FEKRRKSCACL
Trigger: CAGGCATGCACAGCTCTTCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp AAGTCAGGCCGCTGTCAGTTCAAACCCAGGTTCTGCTaGTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCTC +
Preference number: 3 (lower is better)
Translates to: KSGRCQFKPRFC*LQAMWSLASSL
Trigger: GAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGACAGCGGCCTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp ACAGCCAGGAGCATCCTGGGCATAAAAATCAGCACCTaGGGCCTCATTCCACTCATCTCGCACACCTCTGCA +
Preference number: 3 (lower is better)
Translates to: TARSILGIKIST*GLIPLISHTSA
Trigger: TGCAGAGGTGTGCGAGATGAGTGGAATGAGGCCCCAGGTGCTGATTTTTATGCCCAGGATGCTCCTGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp GGGAGCAACCTCAGTCCTGCATCCTCGTCAACACCCTaGCTGTTCTCAACAATAATCCCACCCATGTGGGGA +
Preference number: 3 (lower is better)
Translates to: GSNLSPASSSTP*LFSTIIPPMWG
Trigger: TCCCCACATGGGTGGGATTATTGTTGAGAACAGTCAGGGTGTTGACGAGGATGCAGGACTGAGGTTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp CAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATaGTCCCTAAAGAGCTTGCCCAGGTCAGGATGTCTC +
Preference number: 3 (lower is better)
Translates to: QRPWRMRHRQER*SLKSLPRSGCL
Trigger: GAGACATCCTGACCTGGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp GGCAGGTTGGGAAACTCAGTCACAAGCTCACGGGCCTaGTCCATACGTACAGTCCTCAATAATGGGCTTGGT +
Preference number: 3 (lower is better)
Translates to: GRLGNSVTSSRA*SIRTVLNNGLG
Trigger: ACCAAGCCCATTATTGAGGACTGTACGTATGGAGCAGGCCCGTGAGCTTGTGACTGAGTTTCCCAACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp CAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTaGTCTCTGGCAAGTTCCCTCCCTGCTCTGAATCTC +
Preference number: 3 (lower is better)
Translates to: QFKPRFCCLQAM*SLASSLPALNL
Trigger: GAGATTCAGAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp GGCCAGGAGAGTCAGGGTTATGATTCAGAACCAAGATaGCTGGACTCAAATGGGTGTGAAGTAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: GQESQGYDSEPR*LDSNGCEVGGW
Trigger: CCACCCTCCTACTTCACACCCATTTGAGTCCAGCCATCTTGGTTCTGAATCATAACCCTGACTCTCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp GGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTaGCAGGTTGGGAAACTCAGTCACAAGCTCACGGGC +
Preference number: 3 (lower is better)
Translates to: GQKNIHPKQMGA*QVGKLSHKLTG
Trigger: GCCCGTGAGCTTGTGACTGAGTTTCCCAACCTGCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp ACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATaGGAGCCTGGCAGGTTGGGAAACTCAGTCACAAGC +
Preference number: 3 (lower is better)
Translates to: TREGRKIFILSK*EPGRLGNSVTS
Trigger: GCTTGTGACTGAGTTTCCCAACCTGCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CCA 72 bp CTCTCCCCATTGAGACCATTTTTACTGTTGGTGAACTaGAGGACTATCGCACTGCCCAAGACACTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSPLRPFLLLVN*RTIALPKTLFS
Trigger: AGAGAACAGTGTCTTGGGCAGTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATGGTCTCAATGGGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp CAACTACAAAAGGGGACTAATGTGATAGGATTCTCCTaGGCCAACACAGGAGTTGAAAGAGCCCAACAGAGG +
Preference number: 3 (lower is better)
Translates to: QLQKGTNVIGFS*ANTGVERAQQR
Trigger: CCTCTGTTGGGCTCTTTCAACTCCTGTGTTGGCTCAGGAGAATCCTATCACATTAGTCCCCTTTTGTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp AGAATTGAACTCCCCAAGCAAAATGCCAGATCTGCCTaGGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTA +
Preference number: 3 (lower is better)
Translates to: RIELPKQNARSA*APFRLEFCLPL
Trigger: TAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCAGATCTGGCATTTTGCTTGGGGAGTTCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR-3UTR CAA 90 bp AAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCAATGAATTGATGACGTGTAGAGTGCTTAACAGCTaGGCAATCAGAGAACGCTGT +
Preference number: 3 (lower is better)
Translates to: KKNQKAVQAAAGNELMTCRVLNS*AIRERC
Trigger: ACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCT...ACACGTCATCAATTCATTGCCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR TCA 72 bp AGTTCCCTCCCTGCTCTGAATCTCAGTCTCCTGATCTaGATAATGGACACATTACACTTATTCCACAGTGTT +
Preference number: 3 (lower is better)
Translates to: SSLPALNLSLLI*IMDTLHLFHSV
Trigger: AACACTGTGGAATAAGTGTAATGTGTCCATTATTCAGATCAGGAGACTGAGATTCAGAGCAGGGAGGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR GCA 72 bp ACACAGGAGTTGAAAGAGCCCAACAGAGGTGCAAACTaGCATTATGATTCCATGATAATAATTCCACATACT +
Preference number: 3 (lower is better)
Translates to: TQELKEPNRGAN*HYDSMIIIPHT
Trigger: AGTATGTGGAATTATTATCATGGAATCATAATGGCAGTTTGCACCTCTGTTGGGCTCTTTCAACTCCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGATCCGGCCAAGAGATaGCGGGGTGGCGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIDPAKR*RGGGRG
Trigger: GCCCCTCCCGCCACCCCGCCATCTCTTGGCCGGATC...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp GGCCTCATTCCACTCATCTCGCACACCTCTGCAGTCCCTTCCACGATGCCCTCACGTGCTACTCAGGTGTaGACTGAGGACCAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GLIPLISHTSAVPSTMPSRATQV*TEDQPR
Trigger: ACGCGGCTGGTCCTCAGTGCACACCTGAGTAGCACG...TGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp GGCCTCATTCCACTCATCTCGCACACCTCTGCAGTCCCTTCCACGATGCCCTCAGTCCCTGCCTGGCTCTaGGTTTCACTGAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLIPLISHTSAVPSTMPSVPAWL*VSLKAP
Trigger: AGGGGCTTTCAGTGAAACGCAGAGCCAGGCAGGGAC...TGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAGTTAGGGAGGAGAAGGCAGCGAGGAACCCCGCACTTTAAGGAACAGGGATGTCTCACCCACCTGAGATaGCTCGTCCGCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QLGRRRQRGTPHFKEQGCLTHLR*LVRLPS
Trigger: GCTGGGAAGGCGGACGAGGCATCTCAGGTGGGTGAG...ACATCCCTGTTCCTTAAAGTGCGGGGTTCCTCGCTGCCTTCTCCTCCCTAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GTGCTTAACAGCTTGGCAATCAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGACAGCTCCGCGGGGATaGAGTGTCCCATCTGACAAA +
Preference number: 4 (lower is better)
Translates to: VLNSLAIRERCVHGQLRGTAPRG*SVPSDK
Trigger: TTTGTCAGATGGGACACTTCATCCCCGCGGAGCTGT...CCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTGGGTCTGAGCAACGCTaGTGCAGCGGAGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VSSNPGSAACKPCGLWQVGSEQR*CSGAPH
Trigger: GTGAGGGGCTCCGCTGCATCAGCGTTGCTCAGACCC...AACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAGTTAGGGAGGAGAAGGCAGCGAGGAACCCCGCACTTTAAGGAACAGGGATGTGGCTACCCGAGGCTCTaGAGGCCCCAAACTCACCTT +
Preference number: 4 (lower is better)
Translates to: QLGRRRQRGTPHFKEQGCGYPRL*RPQTHL
Trigger: AAGGTGAGTTTGGGGCCTGCAGAGCCTCGGGTAGCC...ACATCCCTGTTCCTTAAAGTGCGGGGTTCCTCGCTGCCTTCTCCTCCCTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp AGACAGGAAAGATGCTCCCTAAAGAGCTTGCCCAGGTCAGGATGTCTCCGAGCAAGAGCTGTGCATGCCTaGAGCCCCTGGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: RQERCSLKSLPRSGCLRARAVHA*SPWEPM
Trigger: CATGGGCTCCCAGGGGCTCCAGGCATGCACAGCTCT...TGCTCGGAGACATCCTGACCTGGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTCTGCAGGGCCAGGGATaGAGGTGCAAGGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VSSNPGSAACKPCGLWQVLQGQG*RCKGKP
Trigger: GGGCTTTCCCTTGCACCTTCATCCCTGGCCCTGCAG...AACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCAGGACTCAAATGGGTGTaGAGTAGGAGGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPGLKWV*SRRVGK
Trigger: CTTTCCCACCCTCCTACTTCACACCCATTTGAGTCC...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTCAGCTGATGGCAGCGTaGGTCCAGGGCGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LEGLSACSQTSLPIETIFQLMAA*VQGGEV
Trigger: GACCTCTCCGCCCTGGACGCACGCTGCCATCAGCTG...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTCAGGTTTGCACAGGGTaGCAGTTAGGGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIQVCTG*QLGRRR
Trigger: CCTTCTCCTCCCTAACTGGCACCCTGTGCAAACCTG...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGACAAAACCGCGGACTCTaGAAACCCCAGACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGQNRGL*KPQTSS
Trigger: GGAGGAGGTCTGGGGTTTCCAGAGTCCGCGGTTTTG...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTAGAGTGCAAAGGCCATaGAGAATGCGGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFRVQRP*RMRHRQ
Trigger: CTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCT...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTTCCTTAGGCTTGTGGTaGGGAATCCTCCAAGGATGG +
Preference number: 4 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFSLGLW*GILQGW
Trigger: CCATCCTTGGAGGATTCCCCACCACAAGCCTAAGGA...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 72 bp TTCCCAGCAGCTCCCTTCCGCAGAGTGCTTAACAGCTaGGCAATCAGAGAACGCTGTGTGCACGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: FPAAPFRRVLNS*AIRERCVHGQL
Trigger: GAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAGCTGCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 72 bp TCAGGCCGCTGTCAGTTCAAACCCAGGTTCTGCTGCTaGCAAGCCATGTGGTCTCTGGCAAGTTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SGRCQFKPRFCC*QAMWSLASSLP
Trigger: AGGGAGGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGACAGCGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGACAAAACGAGGGACACTaGGTGACTCTGGGAGCAACC +
Preference number: 4 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGQNEGH*VTLGAT
Trigger: GGTTGCTCCCAGAGTCACTCAGTGTCCCTCGTTTTG...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp GGCCTCATTCCACTCATCTCGCACACCTCTGCAGTCCCTTCCACGATGCCCTCAAAACTCACCTTCTGTTaGCCCATTCAGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLIPLISHTSAVPSTMPSKLTFC*PIQHQP
Trigger: TGGCTGGTGCTGAATGGGGCAACAGAAGGTGAGTTT...TGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAGTTAGGGAGGAGAAGGCAGCGAGGAACCCCGCACTTTAAGGAACAGGGATGTCCTGTTGGAGTCACCTaGGGCCAGATTCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: QLGRRRQRGTPHFKEQGCPVGVT*GQILGL
Trigger: TAGTCCCAGAATCTGGCCCCAGGTGACTCCAACAGG...ACATCCCTGTTCCTTAAAGTGCGGGGTTCCTCGCTGCCTTCTCCTCCCTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCAAGGTTCTGGTTACTATaGCATGCACATCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPRFWLL*HAHPAQ
Trigger: CTGGGCAGGATGTGCATGCCATAGTAACCAGAACCT...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTACTCTCTCGCTCCTCTaGGCTACCCGAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSSNPGSAACKPCGLWQVTLSLL*ATRGSA
Trigger: TGCAGAGCCTCGGGTAGCCCAGAGGAGCGAGAGAGT...AACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCAAAGCAAATGGGAGCCTaGCAGGTTGGGAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPKQMGA*QVGKLS
Trigger: ACTGAGTTTCCCAACCTGCCAGGCTCCCATTTGCTT...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTTTCATCCTAAGCAAATaGGAGCCTGGCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFFILSK*EPGRLG
Trigger: TCCCAACCTGCCAGGCTCCCATTTGCTTAGGATGAA...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 72 bp ATGCGGCACAGACAGGAAAGATGCTCCCTAAAGAGCTaGCCCAGGTCAGGATGTCTCCGAGCAAAACGAGGG +
Preference number: 4 (lower is better)
Translates to: MRHRQERCSLKS*PRSGCLRAKRG
Trigger: CCCTCGTTTTGCTCGGAGACATCCTGACCTGGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCTGTGCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TGGCTCACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTGGCTGTTACCCTCACTCCTaGCAGAGGCAGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: WLTREGRKIFILSKWEPGCYPHS*QRQTCL
Trigger: CAGGCAGGTCTGCCTCTGTCAGGAGTGAGGGTAACA...GCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCAGGGATGGTGGGTCTaGGCAACGCTGATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRQGWWV*ATLMQR
Trigger: CCGCTGCATCAGCGTTGCTCAGACCCACCATCCCTG...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTTCCCCTTTGAGGGACTaGGGCAGCCCAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LEGLSACSQTSLPIETIFSPLRD*GSPERR
Trigger: CCTCCTTTCTGGGCTGCCTCAGTCCCTCAAAGGGGA...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GTGCTTAACAGCTTGGCAATCAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGGGAGAGTCAGGGTTATaGTTCAGAACCAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: VLNSLAIRERCVHGQLRGGESGL*FRTKMA
Trigger: AGCCATCTTGGTTCTGAATCATAACCCTGACTCTCC...CCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTATGGCATGCACATCCTaGCCAGCTGAGAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIMACTS*PAEKFQ
Trigger: CTGGAATTTCTCAGCTGGGCAGGATGTGCATGCCAT...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATCGGAAGAGCTGTGCATaGCTGGAGCCCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDRKSCA*LEPLGA
Trigger: GGCTCCCAGGGGCTCCAGGCATGCACAGCTCTTCCG...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGTCAGAGAACGCTGTGTaGACGGACAGCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRSENAV*TDSSAG
Trigger: CCCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGA...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TGGCTCACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTGGCGGCTCTGCGTTTCACTaGAAGCCCCTTGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: WLTREGRKIFILSKWEPGGSAFH*KPLALI
Trigger: AATCAGGGCAAGGGGCTTTCAGTGAAACGCAGAGCC...GCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTACGAGGGACACTGAGTaGCTCTGGGAGCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: LEGLSACSQTSLPIETIFTRDTE*LWEQPQ
Trigger: CTGAGGTTGCTCCCAGAGTCACTCAGTGTCCCTCGT...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATTCCTGCCGGGCCGCCTaGCTTTGTTGTCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDSCRAA*LCCPED
Trigger: GTCCTCAGGACAACAAAGGCAGGCGGCCCGGCAGGA...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGGTCATAGCAGCCGTCTaGATGGGGGAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMVIAAV*MGEGAG
Trigger: CCCAGCCCCCTCCCCCATGCAGACGGCTGCTATGAC...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGAGGATGCATGTGGAGGCGGAAGAGCTGTaGATGCCTGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FMAMTFHTSSVRSRRMHVEAEEL*MPGAPG
Trigger: CCCAGGGGCTCCAGGCATGCACAGCTCTTCCGCCTC...CACATGCATCCTCCTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAGTTAGGGAGGAGAAGGCAGCGAGGAACCCCGCACTTTAAGGAACAGGGATGTCTCCCTTCCGCAGAGTaGTTAACAGCTTGGCAATCA +
Preference number: 4 (lower is better)
Translates to: QLGRRRQRGTPHFKEQGCLPSAE*LTAWQS
Trigger: TGATTGCCAAGCTGTTAAGCACTCTGCGGAAGGGAG...ACATCCCTGTTCCTTAAAGTGCGGGGTTCCTCGCTGCCTTCTCCTCCCTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGACACAGACAGGAAAGATaGTCCCTAAAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGHRQER*SLKSLP
Trigger: GGGCAAGCTCTTTAGGGAGCATCTTTCCTGTCTGTG...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTAATGCCAGATCTGCCTaGGCTCCTTTCAGACTAGAA +
Preference number: 4 (lower is better)
Translates to: SSPPLEGLSACSQTSLPINARSA*APFRLE
Trigger: TTCTAGTCTGAAAGGAGCGCAGGCAGATCTGGCATT...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGATGTGAAGTAGGAGGGTaGGAAAGCGTGGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGCEVGG*ESVGSE
Trigger: TTCAGAACCCACGCTTTCCCACCCTCCTACTTCACA...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCAGATTCAGAACCAAGATaGCTGGACTCAAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPDSEPR*LDSNGC
Trigger: ACACCCATTTGAGTCCAGCCATCTTGGTTCTGAATC...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGGCGAGTGGCCCACAGTaGCTCACCAGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QCQNPGNELTQICVPSGKASGPQ*LTREGR
Trigger: TCTGCCCTCCCTGGTGAGCCACTGTGGGCCACTCGC...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGACTGCCTTTGTTGTCCTaGGGACTGACAGGTAATGTT +
Preference number: 4 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGLPLLS*GLTGNV
Trigger: AACATTACCTGTCAGTCCTCAGGACAACAAAGGCAG...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCAAGCTGCTGCAGGCAATaGATTGATGACGTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPSCCRQ*IDDVFK
Trigger: TTTAAACACGTCATCAATTCATTGCCTGCAGCAGCT...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp AGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCGCAAAATGCCAGATCTaGCTGCGCTCCTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: SSNPGSAACKPCGLWQVPAKCQI*LRSFQT
Trigger: AGTCTGAAAGGAGCGCAGGCAGATCTGGCATTTTGC...GGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTCAGACTCACAGGTTCTaGTTACTATGGCATGCACAT +
Preference number: 4 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIQTHRF*LLWHAH
Trigger: ATGTGCATGCCATAGTAACCAGAACCTGTGAGTCTG...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CTAGCCACCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGTTACTGTTGGTGAACTaGAGGACTATCGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LATLDSKGALSGAFCFEKLLLVN*RTIALP
Trigger: GGGCAGTGCGATAGTCCTCCAGTTCACCAACAGTAA...CTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGGTGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGCATGCCTGGAGCCCCTaGGAGCCCATGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKHAWSP*EPMTAR
Trigger: CCTGGCTGTCATGGGCTCCCAGGGGCTCCAGGCATG...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATGAGGGTGGGAAAGCGTaGGTTCTGAAGTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDEGGKA*VLKSGR
Trigger: GCGGCCTGACTTCAGAACCCACGCTTTCCCACCCTC...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGAACAGTGTTGCTGAGCTaGTCAAGTGTGTTAACACGT +
Preference number: 4 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGTVLLS*SSVLTR
Trigger: ACGTGTTAACACACTTGATCAGCTCAGCAACACTGT...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTAGGATGGAGTTAAAATaGACAGCCAATACTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIRMELK*TANTLS
Trigger: CGAGAGAGTATTGGCTGTTCATTTTAACTCCATCCT...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGGAGTTCTCCTCTTCCTaGCGGGCCGCCTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMEFSSS*RAACLC
Trigger: ACAAAGGCAGGCGGCCCGGCAGGAAGAGGAGAACTC...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTTCACTGAAAGCCCCTTaGCCTGATTCTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LEGLSACSQTSLPIETIFSLKAP*PDSSPQ
Trigger: CTGAGGGCTAGAATCAGGGCAAGGGGCTTTCAGTGA...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGGGCAGACCTGCCTGTTaGAGTCACCTGGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: QCQNPGNELTQICVPSGKGRPAC*SHLGPD
Trigger: ATCTGGCCCCAGGTGACTCCAACAGGCAGGTCTGCC...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGCCTCCAGCCCTCCTCTaGAAGGACTCAGCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: QCQNPGNELTQICVPSGKPPALL*KDSALA
Trigger: TGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGAGG...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TTTCCGTGCCCTTTTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGTAAGGAGTGGCGAGTaGCCCACAGTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: FPCPFHGHDFSYIFCEIQVRSGE*PTVAHQ
Trigger: CTGGTGAGCCACTGTGGGCCACTCGCCACTCCTTAC...CTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGGCACGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 72 bp GGGCCTGCTCCATACGTACAGTCCTCAATAATGGGCTaGGTCTGTGATGCAAAGCTACCTGAAAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GPAPYVQSSIMG*VCDAKLPERHS
Trigger: TGAGTGCCTTTCAGGTAGCTTTGCATCACAGACCAAGCCCATTATTGAGGACTGTACGTATGGAGCAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGAAACCTGGGCGTCAGTaGCAGCTCCCCAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKKPGRQ*QLPRDG
Trigger: ACCATCCCTGGGGAGCTGTCACTGACGCCCAGGTTT...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TGGCTCACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTGGCGTGATAGGATTCTCCTaGGCCAACACAGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: WLTREGRKIFILSKWEPGVIGFS*ANTGVE
Trigger: TTCAACTCCTGTGTTGGCTCAGGAGAATCCTATCAC...GCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCTGGTTACTATGGCATaGACATCCTGCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRLVTMA*TSCPAE
Trigger: CTCAGCTGGGCAGGATGTGCATGCCATAGTAACCAG...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATGAAGGACTCAGCGCTTaGAGTCAGACATCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDEGLSA*SQTSLP
Trigger: GGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTC...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGGATCCGCGCTGTCCCTaGCTGGCTCTGCGTTTCACT +
Preference number: 4 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKDPRCP*LALRFT
Trigger: AGTGAAACGCAGAGCCAGGCAGGGACAGCGCGGATC...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGTGCAAGGGAAAGCCCTaGGACCTGGACCTTAGGCGT +
Preference number: 4 (lower is better)
Translates to: QCQNPGNELTQICVPSGKCKGKP*DLDLRR
Trigger: ACGCCTAAGGTCCAGGTCCCAGGGCTTTCCCTTGCA...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATAAGCCATGTGGTCTCTaGCAAGTTCCCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDKPCGL*QVPSLL
Trigger: GAGCAGGGAGGGAACTTGCCAGAGACCACATGGCTT...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGATGGGCCTTGCAGATTaGGTTCTCCTCTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: QCQNPGNELTQICVPSGKMGLAD*VLLFLP
Trigger: CGGCAGGAAGAGGAGAACTCAATCTGCAAGGCCCAT...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp AAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCAATGAATTGATGACGTGTAGGCACAGGATGTACTaGGAAGGGGAAACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KKNQKAVQAAAGNELMTCRHRMY*EGETWA
Trigger: CGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCT...ACACGTCATCAATTCATTGCCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GTCAGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTTTCATACATCTTCTGTaGGATCCAGGAGGATGCATG +
Preference number: 4 (lower is better)
Translates to: VSSNPGSAACKPCGLWQVFIHLL*DPGGCM
Trigger: CATGCATCCTCCTGGATCTCACAGAAGATGTATGAA...AACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATCTTTCTGGGGCATTCTaGTTCGAGAAGAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDLSGAF*FEKRRK
Trigger: CTTCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAG...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGGAGGATGCATGTGGAGCAACCTCAGTCCTaGATCCTCGTCAACACCCTG +
Preference number: 4 (lower is better)
Translates to: FMAMTFHTSSVRSRRMHVEQPQS*ILVNTL
Trigger: CAGGGTGTTGACGAGGATGCAGGACTGAGGTTGCTC...CACATGCATCCTCCTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
3UTR CAA 72 bp GTCAGACATCTCTCCCCATTGAGACCATTTTTACTGTaGGTGAACTGGAGGACTATCGCACTGCCCAAGACA +
Preference number: 4 (lower is better)
Translates to: VRHLSPLRPFLL*VNWRTIALPKT
Trigger: TGTCTTGGGCAGTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATGGTCTCAATGGGGAGAGATGTCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp CTAGCCACCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGCCAGAATCCTGGAAATaGGTTAACCCAAATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LATLDSKGALSGAFCFEKPESWK*VNPNLC
Trigger: ACACAAATTTGGGTTAACTCATTTCCAGGATTCTGG...CTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGGTGGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGGGAGGACTATCGCACTaGCCAAGACACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMGGLSH*PRHCSL
Trigger: CAGAGAACAGTGTCTTGGGCAGTGCGATAGTCCTCC...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTATAAAAATCAGCACCTaGGGCCTCATTCCACTCATC +
Preference number: 4 (lower is better)
Translates to: LEGLSACSQTSLPIETIFIKIST*GLIPLI
Trigger: GATGAGTGGAATGAGGCCCCAGGTGCTGATTTTTAT...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGGAGTGCTTAACAGCTTaGCAATCAGAGAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRECLTA*QSENAV
Trigger: CACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTC...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TGGCTCACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTGGCATGGCAGAGATGTCATaGACATTAGGATTTCCACAA +
Preference number: 4 (lower is better)
Translates to: WLTREGRKIFILSKWEPGMAEMS*TLGFPQ
Trigger: TTGTGGAAATCCTAATGTTCATGACATCTCTGCCAT...GCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGAGCCAACACAGGAGTTaGAAGAGCCCAACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKSQHRS*KSPTEV
Trigger: CACCTCTGTTGGGCTCTTTCAACTCCTGTGTTGGCT...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGCCGCGTCAACATCACTaGGGCTTCTTAGCAAAACCG +
Preference number: 4 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKPRQHH*GFLAKP
Trigger: CGGTTTTGCTAAGAAGCCGCAGTGATGTTGACGCGG...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCTTCCAGAGCTGTTCTaGAAAGAAAAACCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRLPELF*KEKPKG
Trigger: GCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TTCCACATACTAGGAATACCGGGATTATTTCAGACCTTATATCTGCTCTTAACCACAAGCTCACGGGCCTaGTCCATACGTACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FHILGIPGLFQTLYLLLTTSSRA*SIRTVL
Trigger: GAGGACTGTACGTATGGAGCAGGCCCGTGAGCTTGT...GGTTAAGAGCAGATATAAGGTCTGAAATAATCCCGGTATTCCTAGTATGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGCCCTCTCTACTATCATaGGCCTTGCAGATTGAGTTC +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMPSLLS*ALQIEF
Trigger: GAACTCAATCTGCAAGGCCCATGATAGTAGAGAGGG...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TTCCACATACTAGGAATACCGGGATTATTTCAGACCTTATATCTGCTCTTAACCGGAGCACAGGGCTATTaGCAAGGAGACAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: FHILGIPGLFQTLYLLLTGAQGY*QGDRAS
Trigger: ACTAGCCCTGTCTCCTTGCCAATAGCCCTGTGCTCC...GGTTAAGAGCAGATATAAGGTCTGAAATAATCCCGGTATTCCTAGTATGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp AGTTCAAACCCAGGTTCTGCTGCTTGCAAGCCATGTGGTCTCTGGCAAGTTCCCGGAATACATACACTGTaGGGTTACAATGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSNPGSAACKPCGLWQVPGIHTL*GYNEEN
Trigger: ATTTTCTTCATTGTAACCCCACAGTGTATGTATTCC...GGGAACTTGCCAGAGACCACATGGCTTGCAAGCAGCAGAACCTGGGTTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGCATTTTTACTGTTGGTaGACTGGAGGACTATCGCAC +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMHFYCW*TGGLSH
Trigger: GTGCGATAGTCCTCCAGTTCACCAACAGTAAAAATG...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CAAAAGCAAAAAGAGTGCAAAGGCCATGGAGAATGCGGCACAGACAGGAAAGATTACTATCATGGGCCTTaGAGATTGAGTTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QKQKECKGHGECGTDRKDYYHGP*RLSSPL
Trigger: AAGAGGAGAACTCAATCTGCAAGGCCCATGATAGTA...ATCTTTCCTGTCTGTGCCGCATTCTCCATGGCCTTTGCACTCTTTTTGCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGAATGGATTATCACTGTaGGGCTCACTTTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRNGLSL*GSLSKR
Trigger: TCTCTTTGAAAGTGAGCCGCACAGTGATAATCCATT...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TTCCACATACTAGGAATACCGGGATTATTTCAGACCTTATATCTGCTCTTAACCGTGGAGCATAGGATGTaGCCAGGAGAGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: FHILGIPGLFQTLYLLLTVEHRM*PGESGL
Trigger: TAACCCTGACTCTCCTGGCCACATCCTATGCTCCAC...GGTTAAGAGCAGATATAAGGTCTGAAATAATCCCGGTATTCCTAGTATGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGCCAGGAGGATGCATGTaGATTTTGCAAGTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QCQNPGNELTQICVPSGKPGGCM*ILQVSQ
Trigger: TTGGCTTACTTGCAAAATCCACATGCATCCTCCTGG...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp GATTATCACTGTGCGGCTCACTTTCAAAGAGATGGCAGGCTTAAAAAGGAAAAGGACATCTCTCCCCATTaGGACCATTTTTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: DYHCAAHFQRDGRLKKEKDISPH*DHFYCW
Trigger: CCAACAGTAAAAATGGTCTCAATGGGGAGAGATGTC...CTTTTCCTTTTTAAGCCTGCCATCTCTTTGAAAGTGAGCCGCACAGTGATAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGCTATATTCCATACCTTaGATCGGGCCTAATATCTGC +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMLYSIP*IGPNIC
Trigger: GCAGATATTAGGCCCGATTCAAGGTATGGAATATAG...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR TCA 90 bp TTTCCGTGCCCTTTTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGCCCTTTTCATGGCCATaGCTTTTCATACATCTTCTG +
Preference number: 4 (lower is better)
Translates to: FPCPFHGHDFSYIFCEIQPFSWP*LFIHLL
Trigger: CAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGG...CTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGGCACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR GCA 90 bp TGCCTGCGCTCCTTTCAGACTAGAATTCTGTCTCCCTTTAAAGATCCTTACATGAACAGAGGTGCAAACTaGCATTATGATTCCATGATA +
Preference number: 4 (lower is better)
Translates to: CLRSFQTRILSPFKDPYMNRGAN*HYDSMI
Trigger: TATCATGGAATCATAATGGCAGTTTGCACCTCTGTT...CATGTAAGGATCTTTAAAGGGAGACAGAATTCTAGTCTGAAAGGAGCGCAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CCA 90 bp TTCCACATACTAGGAATACCGGGATTATTTCAGACCTTATATCTGCTCTTAACCAATTTGTGTGCCTTCTaGCAAGCCCAACTATCCAAC +
Preference number: 4 (lower is better)
Translates to: FHILGIPGLFQTLYLLLTNLCAF*QAQLSN
Trigger: GTTGGATAGTTGGGCTTGCCAGAAGGCACACAAATT...GGTTAAGAGCAGATATAAGGTCTGAAATAATCCCGGTATTCCTAGTATGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS GCA 90 bp GCGGGAGGGGCGCTCTGGCGACCCCGGAAGCGAGAAGCAGGCCTCTaGAGGGCCAGGGATGAAGGTGCAAGGGAAAGCCCTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: AGGALWRPRKREAGL*RARDEGARESPGTW
Trigger: CCAGGTCCCAGGGCTTTCCCTTGCACCTTCATCCCTGGCCCTGCAGAGGCCTGCTTCTCGCTTCCGGGGTCGCCAGAGCGCCCCTCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp TCCAGCCCTCCTCTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTAGGCAGACCTGCCTGTaGGAGTCACCTGGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: SSPPLEGLSACSQTSLPIRQTCL*ESPGAR
Trigger: TCTGGCCCCAGGTGACTCCAACAGGCAGGTCTGCCT...AATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAGAGGAGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS TCA 90 bp TTCTCCTCTTCCTGCCGGGCCGCCTGCCTTTGTTGTCCTGAGGACTaGCAGGTAATGTTTGTGGCAGACCTCACACAGCCACAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: FSSSCRAACLCCPED*QVMFVADLTQPQPW
Trigger: CCACGGCTGTGGCTGTGTGAGGTCTGCCACAAACATTACCTGTCAGTCCTCAGGACAACAAAGGCAGGCGGCCCGGCAGGAAGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS-3UTR CAA 90 bp GTGCTTAACAGCTTGGCAATCAGAGAACGCTGTGTGCACGGACAGCTCCGCGGGTGGGAGCCTGGCAGGTaGGGAAACTCAGTCACAAGC +
Preference number: 5 (lower is better)
Translates to: VLNSLAIRERCVHGQLRGWEPGR*GNSVTS
Trigger: GCTTGTGACTGAGTTTCCCAACCTGCCAGGCTCCCA...CCCGCGGAGCTGTCCGTGCACACAGCGTTCTCTGATTGCCAAGCTGTTAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp GGCCTCATTCCACTCATCTCGCACACCTCTGCAGTCCCTTCCACGATGCCCTCATGCTCCCTAAAGAGCTaGCCCAGGTCAGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: GLIPLISHTSAVPSTMPSCSLKS*PRSGCL
Trigger: GAGACATCCTGACCTGGGCAAGCTCTTTAGGGAGCA...TGAGGGCATCGTGGAAGGGACTGCAGAGGTGTGCGAGATGAGTGGAATGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp CTAGCCACCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGGGAAGGACTCAGCGCTaGCAGTCAGACATCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LATLDSKGALSGAFCFEKGRTQR*QSDISP
Trigger: GGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCC...CTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGGTGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp GAGGCACAGGATGTACTGAGAAGGGGAAACCTGGGCGTCAGTGACAGCTCCCCAAGAGTGCTTAACAGCTaGGCAATCAGAGAACGCTGT +
Preference number: 5 (lower is better)
Translates to: EAQDVLRRGNLGVSDSSPRVLNS*AIRERC
Trigger: ACAGCGTTCTCTGATTGCCAAGCTGTTAAGCACTCT...TGGGGAGCTGTCACTGACGCCCAGGTTTCCCCTTCTCAGTACATCCTGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp GCAGCCAGAAGCCAGGGCCGCCTGGCAGGCCTATTGCTAAATCTCCCAGTGTTTATTACTTCCTTAGGCTaGTGGTGGGGAATCCTCCAA +
Preference number: 5 (lower is better)
Translates to: AARSQGRLAGLLLNLPVFITSLG*WWGILQ
Trigger: TTGGAGGATTCCCCACCACAAGCCTAAGGAAGTAAT...AAACACTGGGAGATTTAGCAATAGGCCTGCCAGGCGGCCCTGGCTTCTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp TGGCTCACCAGGGAGGGCAGAAAAATATTCATCCTAAGCAAATGGGAGCCTGGCTTCTCTGCAGCAGGTTaGCACAGGGTGCCAGTTAGG +
Preference number: 5 (lower is better)
Translates to: WLTREGRKIFILSKWEPGFSAAG*HRVPVR
Trigger: CCTAACTGGCACCCTGTGCAAACCTGCTGCAGAGAA...GCCAGGCTCCCATTTGCTTAGGATGAATATTTTTCTGCCCTCCCTGGTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp CTTCCAGAGCTGTTCTGCAAAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCATGGGCCTTGCAGATaGAGTTCTCCTCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LPELFCKEKPKGSTSCCRHGPCR*SSPLPA
Trigger: GGCAGGAAGAGGAGAACTCAATCTGCAAGGCCCATG...CCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTTTGCAGAACAGCTCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTGGATGCATGTGGATTTaGCAAGTAAGCCAAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LEGLSACSQTSLPIETIFGCMWI*QVSQAR
Trigger: CCTCGCTTGGCTTACTTGCAAAATCCACATGCATCC...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp CCCTGGATAGTAAAGGTGCCCTTTCTGGGGCATTCTGCTTCGAGAAGAGGCGGAGCTGCAGGCAATGAATaGATGACGTGTTTAAAACAA +
Preference number: 5 (lower is better)
Translates to: PWIVKVPFLGHSASRRGGAAGNE*MTCLKQ
Trigger: TTGTTTTAAACACGTCATCAATTCATTGCCTGCAGC...TCCGCCTCTTCTCGAAGCAGAATGCCCCAGAAAGGGCACCTTTACTATCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp AAGAAAAACCAAAAGGCAGTACAAGCTGCTGCAGGCAATGAATTGATGACGTGTCAAACTCACCTTCTGTaGCCCCATTCAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: KKNQKAVQAAAGNELMTCQTHLL*PHSAPA
Trigger: GGCTGGTGCTGAATGGGGCAACAGAAGGTGAGTTTG...ACACGTCATCAATTCATTGCCTGCAGCAGCTTGTACTGCCTTTTGGTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp CTGGAAGGACTCAGCGCTTGCAGTCAGACATCTCTCCCCATTGAGACCATTTTTAGACCATTTTTACTGTaGGTGAACTGGAGGACTATC +
Preference number: 5 (lower is better)
Translates to: LEGLSACSQTSLPIETIFRPFLL*VNWRTI
Trigger: GATAGTCCTCCAGTTCACCAACAGTAAAAATGGTCT...AAAAATGGTCTCAATGGGGAGAGATGTCTGACTGCAAGCGCTGAGTCCTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp CAATGCCAGAATCCTGGAAATGAGTTAACCCAAATTTGTGTGCCTTCTGGCAAGCTACTATCATGGGCCTaGCAGATTGAGTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QCQNPGNELTQICVPSGKLLSWA*QIEFSS
Trigger: AGAGGAGAACTCAATCTGCAAGGCCCATGATAGTAG...CTTGCCAGAAGGCACACAAATTTGGGTTAACTCATTTCCAGGATTCTGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS-3UTR CAA 90 bp TTTCCGTGCCCTTTTCATGGCCATGACTTTTCATACATCTTCTGTGAGATCCAGTCCTCAATAATGGGCTaGGTCTGTGATGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: FPCPFHGHDFSYIFCEIQSSIMG*VCDAKL
Trigger: TAGCTTTGCATCACAGACCAAGCCCATTATTGAGGA...CTGGATCTCACAGAAGATGTATGAAAAGTCATGGCCATGAAAAGGGCACGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310799.9
CDS GCA 72 bp GTGCGTCCAGGGCGGAGAGGTCGTGCTACTCAGGTGTaGACTGAGGACCAGCCGCGTCAACATCACTGCGGC +
Preference number: 6 (lower is better)
Translates to: VRPGRRGRATQV*TEDQPRQHHCG
Trigger: GCCGCAGTGATGTTGACGCGGCTGGTCCTCAGTGCACACCTGAGTAGCACGACCTCTCCGCCCTGGACGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS CAA 90 bp GTTGGAGTCACCTGGGGCCAGATTCTGGGACTAGGCATCAGCACGTaGTCCAGCTCCCAGCTGATGGCAGCGTGCGTCCAGGGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: VGVTWGQILGLGIST*SSSQLMAACVQGGE
Trigger: CTCTCCGCCCTGGACGCACGCTGCCATCAGCTGGGAGCTGGACAACGTGCTGATGCCTAGTCCCAGAATCTGGCCCCAGGTGACTCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS CAA 90 bp GGGGGTAGCCCAGGCGGCCCTCTCTACTATCATGGGCCTTGCAGATaGAGTTCTCCTCTTCCTGCCGGGCCGCCTGCCTTTGTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GGSPGGPLYYHGPCR*SSPLPAGPPAFVVL
Trigger: CAGGACAACAAAGGCAGGCGGCCCGGCAGGAAGAGGAGAACTCAATCTGCAAGGCCCATGATAGTAGAGAGGGCCGCCTGGGCTACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS GCA 72 bp GGTAGCCCAGGCGGCCCTCTCTACTATCATGGGCCTTaGAGATTGAGTTCTCCTCTTCCTGCCGGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: GSPGGPLYYHGP*RLSSPLPAGPP
Trigger: AGGCGGCCCGGCAGGAAGAGGAGAACTCAATCTGCAAGGCCCATGATAGTAGAGAGGGCCGCCTGGGCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS TCA 72 bp CAGGCGGCCCTCTCTACTATCATGGGCCTTGCAGATTaGGTTCTCCTCTTCCTGCCGGGCCGCCTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: QAALSTIMGLAD*VLLFLPGRLPL
Trigger: CAAAGGCAGGCGGCCCGGCAGGAAGAGGAGAACTCAATCTGCAAGGCCCATGATAGTAGAGAGGGCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS CCA 72 bp CTCCTGACAGAGGCAGACCTGCCTGTTGGAGTCACCTaGGGCCAGATTCTGGGACTAGGCATCAGCACGTTG +
Preference number: 6 (lower is better)
Translates to: LLTEADLPVGVT*GQILGLGISTL
Trigger: CAACGTGCTGATGCCTAGTCCCAGAATCTGGCCCCAGGTGACTCCAACAGGCAGGTCTGCCTCTGTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS TCA 72 bp CTCCTCTTCCTGCCGGGCCGCCTGCCTTTGTTGTCCTaGGGACTGACAGGTAATGTTTGTGGCAGACCTCAC +
Preference number: 6 (lower is better)
Translates to: LLFLPGRLPLLS*GLTGNVCGRPH
Trigger: GTGAGGTCTGCCACAAACATTACCTGTCAGTCCTCAGGACAACAAAGGCAGGCGGCCCGGCAGGAAGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS GCA 72 bp CAGGTGTGCACTGAGGACCAGCCGCGTCAACATCACTaGGGCTTCTTAGCAAAACCGCGGACTCTGGAAACC +
Preference number: 6 (lower is better)
Translates to: QVCTEDQPRQHH*GFLAKPRTLET
Trigger: GGTTTCCAGAGTCCGCGGTTTTGCTAAGAAGCCGCAGTGATGTTGACGCGGCTGGTCCTCAGTGCACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310799.9
ENST00000524878.1
CDS TCA 72 bp GATAATGCCTCTCTCCCGGGAGTGGGAGCACGATGCTaGCACACCGTAGGAACTCGGGACTTGCTGATTCTC +
Preference number: 6 (lower is better)
Translates to: DNASLPGVGARC*HTVGTRDLLIL
Trigger: GAGAATCAGCAAGTCCCGAGTTCCTACGGTGTGTCAGCATCGTGCTCCCACTCCCGGGAGAGAGGCATTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524878.1