Pregenerated sensors for C11ORF42 (Homo sapiens)
Ensembl gene IDs: ENSG00000180878Ensembl transcript IDs: ENST00000316375.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGAGGCAGGGACATGGAGTaGCCGTCGGGGTCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLGEQQLMFIRDQYPYARGRDME*PSGSLG Trigger: CCCCAGGGACCCCGACGGGCACTCCATGTCCCTGCC...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGGGGAGGTGGCGTAGGTaGGGCTGGGACAGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGGRWRR*GWDRWG Trigger: CCCCCACCTGTCCCAGCCCCACCTACGCCACCTCCC...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGAGTGCCCTCCGGCCCTaGCGACCTGGCAAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWSALRP*RPGKAR Trigger: CCTGGCTTTGCCAGGTCGGCAGGGCCGGAGGGCACT...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGCCCCACTGGTTTCAGTaGCCTCCGGCCCTGCCGACC | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWPHWFQ*PPALPT Trigger: GGTCGGCAGGGCCGGAGGGCACTGAAACCAGTGGGG...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCGCAGGGGCAGGGACATaGAGTGCCCGTCGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QLMFIRDQYPYARSWGLCAGAGT*SARRGP Trigger: GGGACCCCGACGGGCACTCCATGTCCCTGCCCCTGC...GCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTCCGGCCCTGCCGACCTaGCAAAGCCAGGCGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: LGEQQLMFIRDQYPYARSPALPT*QSQAGM Trigger: CATACCCGCCTGGCTTTGCCAGGTCGGCAGGGCCGG...AGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGTGGCGTAGGTGGGGCTaGGACAGGTGGGGGCACATC | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWWRRWG*DRWGHI Trigger: GATGTGCCCCCACCTGTCCCAGCCCCACCTACGCCA...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCTCCTCTGGCCCTTCCTaGGGAGGTGGCGTAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPSSGPS*GGGVGG Trigger: CCCACCTACGCCACCTCCCCAGGAAGGGCCAGAGGA...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGTGTATCAGCAGGTGCTaGTGTGGGGGCCAGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWCISRC*CGGQRR Trigger: CCGCCTCTGGCCCCCACATCAGCACCTGCTGATACA...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCGAGGGCTGCGGGGGCTaGAGAGCCAGTTCTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPEGCGG*RASSLT Trigger: TGTCAGAGAACTGGCTCTTCAGCCCCCGCAGCCCTC...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCAGTAGCCGGAGGAGCTaGGGCTCACGGGCTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPSSRRS*GSRAVD Trigger: GTCTACAGCCCGTGAGCCCCAGCTCCTCCGGCTACT...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGAGGTGGGTTTGTCCTCTaGCCCTTCCTGGGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GLGEQQLMFIRDQYPYARGGFVL*PFLGRW Trigger: CCACCTCCCCAGGAAGGGCCAGAGGACAAACCCACC...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATGCTGTAGGCTCACCTaGCCTGGTGGCAGCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: GLGEQQLMFIRDQYPYARCCRLT*PGGSNR Trigger: CCTGTTGCTGCCACCAGGGCAGGTGAGCCTACAGCA...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCGGGTATGGGAGGGATTaGGCAGGGCAGTGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLMFIRDQYPYARSWGLCGYGRD*AGQWLL Trigger: CAGCAGCCACTGCCCTGCCCAATCCCTCCCATACCC...GCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGCAGGCGGGTATGGGCTaGGCGGGACTGTTTTACCAG | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWQAGMG*AGLFYQ Trigger: CTGGTAAAACAGTCCCGCCCAGCCCATACCCGCCTG...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGAAGAGCCAGTTCTCTaGCAGTATCTGGGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWEEPVL*QYLGPP Trigger: AGGGGGCCCCAGATACTGTCAGAGAACTGGCTCTTC...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCCCTCAGATCCTGCCTaGTCCAGGAGGCTTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGPSDPA*SRRLGS Trigger: ACTACCAAGCCTCCTGGAGCAGGCAGGATCTGAGGG...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCAGCCAGGGAAGAGTCTaGTGTAGGCTCACCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPSQGRV*CRLTCP Trigger: AGGGCAGGTGAGCCTACAGCAGACTCTTCCCTGGCT...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTGAGGATAGACCCTaGAGCAGGGGCAGGGACATG | + |
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Preference number: 4 (lower is better) Translates to: GLGEQQLMFIRDQYPYARSEDRP*SRGRDM Trigger: CATGTCCCTGCCCCTGCTGCAGGGTCTATCCTCAGA...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCAAAGCCAGGCGGGTATaGGCTGGGCGGGACTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPKARRV*AGRDCF Trigger: AAAACAGTCCCGCCCAGCCCATACCCGCCTGGCTTT...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTGCTCACCTGCCCTGGTaGCAGCAACAGGAAGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LGEQQLMFIRDQYPYARSAHLPW*QQQEGN Trigger: GTTGCCTTCCTGTTGCTGCCACCAGGGCAGGTGAGC...AGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCTTCTCTGACAGTATCTaGGGCCCCCTCCAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPFSDSI*GPLQKG Trigger: CCCCTTCTGGAGGGGGCCCCAGATACTGTCAGAGAA...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCCCTATGCCAGATCTTaGGGGCTTTGCCCCCGGAAT | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGPYARS*GLCPRN Trigger: ATTCCGGGGGCAAAGCCCCCAAGATCTGGCATAGGG...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATGCTCGGCCATTTGGTaGGTATTCCCGAGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GLGEQQLMFIRDQYPYARCSAIW*VFPSAV Trigger: CACTGCACTCGGGAATACTCACCAAATGGCCGAGCA...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | TTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTGTGAGTATTCCCGAGTaGAGTGGGCGAAGGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: LGEQQLMFIRDQYPYARSVSIPE*SGRRHP Trigger: AGGGTGCCTTCGCCCACTGCACTCGGGAATACTCAC...AGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | TTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTCAACATGGTGGGGTATaGGAGGGATTGGGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LGEQQLMFIRDQYPYARSQHGGV*EGLGRA Trigger: TGCCCTGCCCAATCCCTCCCATACCCCACCATGTTG...AGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCTACCCACCAACATGGTaGGGTATGGGAGGGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPYPPTW*GMGGIG Trigger: CCCAATCCCTCCCATACCCCACCATGTTGGTGGGTA...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGTACCCACCAACATaGTGGGGTATGGGAGGGATT | + |
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Preference number: 4 (lower is better) Translates to: GEQQLMFIRDQYPYARSWGYPPT*WGMGGI Trigger: AATCCCTCCCATACCCCACCATGTTGGTGGGTACCC...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTCCAGTGTCAGCAGGTTaGGGGTACCCACCAACATGG | + |
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Preference number: 4 (lower is better) Translates to: QQLMFIRDQYPYARSWGLPVSAG*GYPPTW Trigger: CCATGTTGGTGGGTACCCCCAACCTGCTGACACTGG...AAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCTATTCCCGAGTGCAGTaGGCGAAGGCACCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPYSRVQ*AKAPSD Trigger: ATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATA...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGAGTGAGAGGCTTCTGTaGTCCCAGCACGCCCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGSERLL*SQHALR Trigger: TCTAAGGGCGTGCTGGGACCACAGAAGCCTCTCACT...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCGGCCCCATGGGGCAATaGGTCTTTAGTGAGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPGPMGQ*VFSERL Trigger: AAGCCTCTCACTAAAGACCCATTGCCCCATGGGGCC...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCGCATTGGGCCCAAAGTaGTCCTCGATGACCTTATCC | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPALGPK*SSMTLS Trigger: GGATAAGGTCATCGAGGAGCACTTTGGGCCCAATGC...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCGCCCCCGGAATCTTTTaGTTCAGCTTCAGTCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPAPGIF*FSFSRH Trigger: GTGACGACTGAAGCTGAAGCAAAAGATTCCGGGGGC...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGAGACCAGTACCCCTATaGCAGATCTTGGGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGRPVPL*QILGAL Trigger: CAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCT...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGAGTACTGCTACTGCATTaGGCCCAAAGTGCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: GLGEQQLMFIRDQYPYARVLLLH*AQSAPR Trigger: TCGAGGAGCACTTTGGGCCCAATGCAGTAGCAGTAC...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGAGAAGACCTGGTAGATaGCATAGATGCTGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGRRPGR*HRCCGC Trigger: GCACCCACAGCATCTATGTCATCTACCAGGTCTTCT...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCGAAAGGTACTGCTACTaGATTGGGCCCAAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LMFIRDQYPYARSWGLCPERYCY*IGPKVL Trigger: GAGCACTTTGGGCCCAATGCAGTAGCAGTACCTTTC...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGTGTAGGAGAATCTGGTaGGTTTGTCCTCTGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: EQQLMFIRDQYPYARSWGCRRIW*VCPLAL Trigger: AAGGGCCAGAGGACAAACCCACCAGATTCTCCTACA...CCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTCCTTGTAGGAGAATCTaGTGGGTTTGTCCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QQLMFIRDQYPYARSWGLPCRRI*WVCPLA Trigger: GGCCAGAGGACAAACCCACCAGATTCTCCTACAAGG...AAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCATAGCAGGCTGCATCTaGCAGGAAAGGTACTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: QLMFIRDQYPYARSWGLCIAGCI*QERYCY Trigger: GTAGCAGTACCTTTCCTGTCAGATGCAGCCTGCTAT...GCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCACTGCAGTGAAAACTTaGGGCAGGAGAAGGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: QLMFIRDQYPYARSWGLCTAVKT*GRRRQQ Trigger: CTGTTGCCTTCTCCTGCCTCAAGTTTTCACTGCAGT...GCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGGGGGAGCAGCAGCTaGTGTTTATTAGAGACCAGT | + |
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Preference number: 4 (lower is better) Translates to: QQLMFIRDQYPYARSWGLWGSSS*CLLETS Trigger: ACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCA...AAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTATGTAGGCGGATCTTaGAGGGCTGTCCATCCAACA | + |
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Preference number: 4 (lower is better) Translates to: QQLMFIRDQYPYARSWGLYVGGS*RAVHPT Trigger: TGTTGGATGGACAGCCCTGCAAGATCCGCCTACATA...AAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTGGAAGGCAACCTTCTTaGGCAGGTCACCCATATGTA | + |
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Preference number: 4 (lower is better) Translates to: QQLMFIRDQYPYARSWGLGRQPS*AGHPYV Trigger: TACATATGGGTGACCTGCGCAAGAAGGTTGCCTTCC...AAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR GCA 90 bp | CAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCAGCACGCCCTTAGACTaGAGTGAAAACTTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QLMFIRDQYPYARSWGLCSTPLD*SENLRQ Trigger: CTGCCTCAAGTTTTCACTGCAGTCTAAGGGCGTGCT...GCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | AGGAGGCTTGGTAGTGGCCCCACTGGTTTCAGTGCCCTCCGGCCCTaGCGACCTGGCAAAGCCAGGCGGGTATGGGCTGGGCGGGACTGT | + |
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Preference number: 5 (lower is better) Translates to: RRLGSGPTGFSALRP*RPGKARRVWAGRDC Trigger: ACAGTCCCGCCCAGCCCATACCCGCCTGGCTTTGCCAGGTCGGCAGGGCCGGAGGGCACTGAAACCAGTGGGGCCACTACCAAGCCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | GAGTATTCCCGAGTGCAGTGGGCGAAGGCACCCTCAGATCCTGCCTaGTCCAGGAGGCTTGGTAGTGGCCCCACTGGTTTCAGTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: EYSRVQWAKAPSDPA*SRRLGSGPTGFSAL Trigger: GAGGGCACTGAAACCAGTGGGGCCACTACCAAGCCTCCTGGAGCAGGCAGGATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | TTGCTTCAGCTTCAGTCGTCACTGTCGAACTCTGAGGATAGACCCTaGAGCAGGGGCAGGGACATGGAGTGCCCGTCGGGGTCCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LLQLQSSLSNSEDRP*SRGRDMECPSGSLG Trigger: CCCCAGGGACCCCGACGGGCACTCCATGTCCCTGCCCCTGCTGCAGGGTCTATCCTCAGAGTTCGACAGTGACGACTGAAGCTGAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | CTGTGGGTGCTTCGGAGCCAGGGAAGAGTCTGCTGTAGGCTCACCTaGCCTGGTGGCAGCAACAGGAAGGCAACCTTCTTGCGCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LWVLRSQGRVCCRLT*PGGSNRKATFLRRS Trigger: TGACCTGCGCAAGAAGGTTGCCTTCCTGTTGCTGCCACCAGGGCAGGTGAGCCTACAGCAGACTCTTCCCTGGCTCCGAAGCACCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS TCA 90 bp | GACAGGTGGGGGCACATCAGCAGCTTCAGTTGTATCAGCAGGTGCTaGTGTGGGGGCCAGAGGCGGCATGATGCTGAGGTTGGGTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: DRWGHISSFSCISRC*CGGQRRHDAEVGSD Trigger: GTCAGACCCAACCTCAGCATCATGCCGCCTCTGGCCCCCACATCAGCACCTGCTGATACAACTGAAGCTGCTGATGTGCCCCCACCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | CTTCATAGGCTCTCTCTGCTCGGCCATTTGGTGAGTATTCCCGAGTaGAGTGGGCGAAGGCACCCTCAGATCCTGCCTGCTCCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LHRLSLLGHLVSIPE*SGRRHPQILPAPGG Trigger: GCCTCCTGGAGCAGGCAGGATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAGCCTATGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | GTAGGCTCACCTGCCCTGGTGGCAGCAACAGGAAGGCAACCTTCTTaGGCAGGTCACCCATATGTAGGCGGATCTTGCAGGGCTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VGSPALVAATGRQPS*AGHPYVGGSCRAVH Trigger: ATGGACAGCCCTGCAAGATCCGCCTACATATGGGTGACCTGCGCAAGAAGGTTGCCTTCCTGTTGCTGCCACCAGGGCAGGTGAGCCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CCA 90 bp | CATGATGCTGAGGTTGGGTCTGACCCAGTTGGCCCCATGGGGCAATaGGTCTTTAGTGAGAGGCTTCTGTGGTCCCAGCACGCCCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: HDAEVGSDPVGPMGQ*VFSERLLWSQHALR Trigger: TCTAAGGGCGTGCTGGGACCACAGAAGCCTCTCACTAAAGACCCATTGCCCCATGGGGCCAACTGGGTCAGACCCAACCTCAGCATCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS TCA 90 bp | CAACATTCGCGTCTCTTCATAGGCTCTCTCTGCTCGGCCATTTGGTaGGTATTCCCGAGTGCAGTGGGCGAAGGCACCCTCAGATCCTGC | + |
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Preference number: 5 (lower is better) Translates to: QHSRLFIGSLCSAIW*VFPSAVGEGTLRSC Trigger: GCAGGATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAGCCTATGAAGAGACGCGAATGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | CAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTCCTGCTCCAGGAGGCTaGGTAGTGGCCCCACTGGTT | + |
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Preference number: 5 (lower is better) Translates to: QQLMFIRDQYPYARSWGLPAPGG*VVAPLV Trigger: AACCAGTGGGGCCACTACCAAGCCTCCTGGAGCAGG...AAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGCATGATGCTGAGGTaGGGTCTGACCCAGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: GEQQLMFIRDQYPYARSWGMMLR*GLTQLA Trigger: GGCCAACTGGGTCAGACCCAACCTCAGCATCATGCC...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 90 bp | GGAAGGCAACCTTCTTGCGCAGGTCACCCATATGTAGGCGGATCTTaGAGGGCTGTCCATCCAACATTCGCGTCTCTTCATAGGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GRQPSCAGHPYVGGS*RAVHPTFASLHRLS Trigger: AGAGAGCCTATGAAGAGACGCGAATGTTGGATGGACAGCCCTGCAAGATCCGCCTACATATGGGTGACCTGCGCAAGAAGGTTGCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGTCCAGTGTCAGCAGGTaGGGGGTACCCACCAACATG | + |
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Preference number: 5 (lower is better) Translates to: GEQQLMFIRDQYPYARSWSSVSR*GVPTNM Trigger: CATGTTGGTGGGTACCCCCAACCTGCTGACACTGGA...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGTACTGCTACTGCATaGGGCCCAAAGTGCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GEQQLMFIRDQYPYARSWGTATA*GPKCSS Trigger: CGAGGAGCACTTTGGGCCCAATGCAGTAGCAGTACC...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | TTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTGAGAATCTGGTGGGTTaGTCCTCTGGCCCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGEQQLMFIRDQYPYARSENLVG*SSGPSW Trigger: CCAGGAAGGGCCAGAGGACAAACCCACCAGATTCTC...AGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCGATGACCTTATCCTaGATGAGGGTCCAGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GLGEQQLMFIRDQYPYARSMTLS*MRVQVA Trigger: TGCCACCTGGACCCTCATCAAGGATAAGGTCATCGA...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | CAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCTCTCTGCTCGGCCATTaGGTGAGTATTCCCGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: QLMFIRDQYPYARSWGLCSLLGH*VSIPEC Trigger: GCACTCGGGAATACTCACCAAATGGCCGAGCAGAGA...GCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | CTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGGGGCTTTGCCCCATATGTAGGCGGATCTaGCAGGGCTGTCCATCCAAC | + |
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Preference number: 5 (lower is better) Translates to: LMFIRDQYPYARSWGLCPICRRI*QGCPSN Trigger: GTTGGATGGACAGCCCTGCAAGATCCGCCTACATAT...GGGGCAAAGCCCCCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | GGTTTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGAAGGAAGGCAACCTTCTaGCGCAGGTCACCCATATGT | + |
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Preference number: 5 (lower is better) Translates to: GLGEQQLMFIRDQYPYARRKATF*RRSPIC Trigger: ACATATGGGTGACCTGCGCAAGAAGGTTGCCTTCCT...TCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | GGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTTGGTGCCCCCGGAATCTTTaGCTTCAGCTTCAGTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: GEQQLMFIRDQYPYARSWCPRNL*LQLQSS Trigger: TGACGACTGAAGCTGAAGCAAAAGATTCCGGGGGCA...CCAAGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS-3UTR CAA 90 bp | TTGGGGGAGCAGCAGCTGATGTTTATTAGAGACCAGTACCCCTATGCCAGATCTGACTGCAGTGAAAACTaGAGGCAGGAGAAGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: LGEQQLMFIRDQYPYARSDCSEN*RQEKAT Trigger: TGTTGCCTTCTCCTGCCTCAAGTTTTCACTGCAGTC...AGATCTGGCATAGGGGTACTGGTCTCTAATAAACATCAGCTGCTGCTCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CCA 72 bp | CCCCACTGGTTTCAGTGCCCTCCGGCCCTGCCGACCTaGCAAAGCCAGGCGGGTATGGGCTGGGCGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: PHWFQCPPALPT*QSQAGMGWAGL Trigger: CAGTCCCGCCCAGCCCATACCCGCCTGGCTTTGCCAGGTCGGCAGGGCCGGAGGGCACTGAAACCAGTGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 72 bp | GGTAGTGGCCCCACTGGTTTCAGTGCCCTCCGGCCCTaGCGACCTGGCAAAGCCAGGCGGGTATGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GSGPTGFSALRP*RPGKARRVWAG Trigger: CCCAGCCCATACCCGCCTGGCTTTGCCAGGTCGGCAGGGCCGGAGGGCACTGAAACCAGTGGGGCCACTACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 90 bp | TGCAGTGGGCGAAGGCACCCTCAGATCCTGCCTGCTCCAGGAGGCTaGGTAGTGGCCCCACTGGTTTCAGTGCCCTCCGGCCCTGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: CSGRRHPQILPAPGG*VVAPLVSVPSGPAD Trigger: GTCGGCAGGGCCGGAGGGCACTGAAACCAGTGGGGCCACTACCAAGCCTCCTGGAGCAGGCAGGATCTGAGGGTGCCTTCGCCCACTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 72 bp | CGAGTGCAGTGGGCGAAGGCACCCTCAGATCCTGCCTaGTCCAGGAGGCTTGGTAGTGGCCCCACTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RVQWAKAPSDPA*SRRLGSGPTGF Trigger: GAAACCAGTGGGGCCACTACCAAGCCTCCTGGAGCAGGCAGGATCTGAGGGTGCCTTCGCCCACTGCACTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 72 bp | GGGCTGGGACAGGTGGGGGCACATCAGCAGCTTCAGTaGTATCAGCAGGTGCTGATGTGGGGGCCAGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GLGQVGAHQQLQ*YQQVLMWGPEA Trigger: CGCCTCTGGCCCCCACATCAGCACCTGCTGATACAACTGAAGCTGCTGATGTGCCCCCACCTGTCCCAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CCA 72 bp | AAGGCAACAGGTAATGACCGAAGTAGCCGGAGGAGCTaGGGCTCACGGGCTGTAGACGTCAGCCCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KATGNDRSSRRS*GSRAVDVSPSC Trigger: GCAGCTGGGGCTGACGTCTACAGCCCGTGAGCCCCAGCTCCTCCGGCTACTTCGGTCATTACCTGTTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 72 bp | CTCTCTCTGCTCGGCCATTTGGTGAGTATTCCCGAGTaGAGTGGGCGAAGGCACCCTCAGATCCTGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSLLGHLVSIPE*SGRRHPQILPA Trigger: AGCAGGCAGGATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CCA 72 bp | TCCAGGTGGCATCAGCTTCATCCAGTGTCAGCAGGTTaGGGGTACCCACCAACATGGTGGGGTATGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SRWHQLHPVSAG*GYPPTWWGMGG Trigger: CCCTCCCATACCCCACCATGTTGGTGGGTACCCCCAACCTGCTGACACTGGATGAAGCTGATGCCACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CCA 72 bp | GAGGTTGGGTCTGACCCAGTTGGCCCCATGGGGCAATaGGTCTTTAGTGAGAGGCTTCTGTGGTCCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: EVGSDPVGPMGQ*VFSERLLWSQH Trigger: GTGCTGGGACCACAGAAGCCTCTCACTAAAGACCCATTGCCCCATGGGGCCAACTGGGTCAGACCCAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 72 bp | GTCCAGGTGGCATCAGCTTCATCCAGTGTCAGCAGGTaGGGGGTACCCACCAACATGGTGGGGTATGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VQVASASSSVSR*GVPTNMVGYGR Trigger: CCTCCCATACCCCACCATGTTGGTGGGTACCCCCAACCTGCTGACACTGGATGAAGCTGATGCCACCTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 90 bp | TGTAGGCTCACCTGCCCTGGTGGCAGCAACAGGAAGGCAACCTTCTaGCGCAGGTCACCCATATGTAGGCGGATCTTGCAGGGCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CRLTCPGGSNRKATF*RRSPICRRILQGCP Trigger: TGGACAGCCCTGCAAGATCCGCCTACATATGGGTGACCTGCGCAAGAAGGTTGCCTTCCTGTTGCTGCCACCAGGGCAGGTGAGCCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 90 bp | TTGATGAGGGTCCAGGTGGCATCAGCTTCATCCAGTGTCAGCAGGTaGGGGGTACCCACCAACATGGTGGGGTATGGGAGGGATTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LMRVQVASASSSVSR*GVPTNMVGYGRDWA Trigger: TGCCCAATCCCTCCCATACCCCACCATGTTGGTGGGTACCCCCAACCTGCTGACACTGGATGAAGCTGATGCCACCTGGACCCTCATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS TCA 72 bp | CGTCTCTTCATAGGCTCTCTCTGCTCGGCCATTTGGTaGGTATTCCCGAGTGCAGTGGGCGAAGGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: RLFIGSLCSAIW*VFPSAVGEGTL Trigger: GAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAGCCTATGAAGAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS TCA 72 bp | GGGCACATCAGCAGCTTCAGTTGTATCAGCAGGTGCTaGTGTGGGGGCCAGAGGCGGCATGATGCTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GHISSFSCISRC*CGGQRRHDAEV Trigger: AACCTCAGCATCATGCCGCCTCTGGCCCCCACATCAGCACCTGCTGATACAACTGAAGCTGCTGATGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 72 bp | TTCGCGTCTCTTCATAGGCTCTCTCTGCTCGGCCATTaGGTGAGTATTCCCGAGTGCAGTGGGCGAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FASLHRLSLLGH*VSIPECSGRRH Trigger: GTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAGCCTATGAAGAGACGCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 90 bp | CATCCAACATTCGCGTCTCTTCATAGGCTCTCTCTGCTCGGCCATTaGGTGAGTATTCCCGAGTGCAGTGGGCGAAGGCACCCTCAGATC | + |
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Preference number: 6 (lower is better) Translates to: HPTFASLHRLSLLGH*VSIPECSGRRHPQI Trigger: GATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAGCCTATGAAGAGACGCGAATGTTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 72 bp | CCTTCTTGCGCAGGTCACCCATATGTAGGCGGATCTTaGAGGGCTGTCCATCCAACATTCGCGTCTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PSCAGHPYVGGS*RAVHPTFASLH Trigger: ATGAAGAGACGCGAATGTTGGATGGACAGCCCTGCAAGATCCGCCTACATATGGGTGACCTGCGCAAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS GCA 72 bp | GACAGGAAAGGTACTGCTACTGCATTGGGCCCAAAGTaGTCCTCGATGACCTTATCCTTGATGAGGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DRKGTATALGPK*SSMTLSLMRVQ Trigger: CTGGACCCTCATCAAGGATAAGGTCATCGAGGAGCACTTTGGGCCCAATGCAGTAGCAGTACCTTTCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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| CDS CAA 72 bp | CAGGCTGCATCTGACAGGAAAGGTACTGCTACTGCATaGGGCCCAAAGTGCTCCTCGATGACCTTATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: QAASDRKGTATA*GPKCSSMTLSL Trigger: CAAGGATAAGGTCATCGAGGAGCACTTTGGGCCCAATGCAGTAGCAGTACCTTTCCTGTCAGATGCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316375.3 |
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