Pregenerated sensors for C11ORF40 (Homo sapiens)
Ensembl gene IDs: ENSG00000171987Ensembl transcript IDs: ENST00000668205.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTGGGCACCAGTGTGAGCTGTGTTGTGGGTCCCCTCTGTCCATCTaGAAAATGGACAGCTTTGGCTCTCTTTCTCTGGGCACCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: SGHQCELCCGSPLSI*KMDSFGSLSLGTSA Trigger: GGCGCTGGTGCCCAGAGAAAGAGAGCCAAAGCTGTCCATTTTGCAGATGGACAGAGGGGACCCACAACACAGCTCACACTGGTGCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 90 bp | ACCAGTGTGAGCTGTGTTGTGGGTCCCCTCTGTCCATCTGCAAAATaGACAGCTTTGGCTCTCTTTCTCTGGGCACCAGCGCCTGCACTA | + |
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Preference number: 5 (lower is better) Translates to: TSVSCVVGPLCPSAK*TALALFLWAPAPAL Trigger: TAGTGCAGGCGCTGGTGCCCAGAGAAAGAGAGCCAAAGCTGTCCATTTTGCAGATGGACAGAGGGGACCCACAACACAGCTCACACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 90 bp | GGTAGTACCCTAAAGCAAGGTCTTTTGTCATCTTCTGCCAAGGTGTaGCCGTTATCACCCATCACCACACTAGACGGCACTGTTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: GSTLKQGLLSSSAKV*PLSPITTLDGTVSG Trigger: CCCACTAACAGTGCCGTCTAGTGTGGTGATGGGTGATAACGGCCACACCTTGGCAGAAGATGACAAAAGACCTTGCTTTAGGGTACTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 90 bp | TGGCCGTTATCACCCATCACCACACTAGACGGCACTGTTAGTGGGTaGTTGGCCTGGTGTATGAACACATCCTTATCTAAGTTAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: WPLSPITTLDGTVSG*LAWCMNTSLSKLKA Trigger: AGCCTTTAACTTAGATAAGGATGTGTTCATACACCAGGCCAACCACCCACTAACAGTGCCGTCTAGTGTGGTGATGGGTGATAACGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS GCA 90 bp | GCAGTGCTAGGATGGAATATTCTGATGGAAGTGTTTTGTAATCAGTaGGGTCCAATTCAATGGCCCAGTCACTTGTGGCTATTGAACACT | + |
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Preference number: 5 (lower is better) Translates to: AVLGWNILMEVFCNQ*GPIQWPSHLWLLNT Trigger: AGTGTTCAATAGCCACAAGTGACTGGGCCATTGAATTGGACCGCACTGATTACAAAACACTTCCATCAGAATATTCCATCCTAGCACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 90 bp | GATCCATACAGTTTTTCCCTGCAAAGACCTGGAGCAGTGCTAGGATaGAATATTCTGATGGAAGTGTTTTGTAATCAGTGCGGTCCAATT | + |
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Preference number: 5 (lower is better) Translates to: DPYSFSLQRPGAVLG*NILMEVFCNQCGPI Trigger: AATTGGACCGCACTGATTACAAAACACTTCCATCAGAATATTCCATCCTAGCACTGCTCCAGGTCTTTGCAGGGAAAAACTGTATGGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 72 bp | AGCTGTGTTGTGGGTCCCCTCTGTCCATCTGCAAAATaGACAGCTTTGGCTCTCTTTCTCTGGGCACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SCVVGPLCPSAK*TALALFLWAPA Trigger: CGCTGGTGCCCAGAGAAAGAGAGCCAAAGCTGTCCATTTTGCAGATGGACAGAGGGGACCCACAACACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS GCA 72 bp | CAGTGTGAGCTGTGTTGTGGGTCCCCTCTGTCCATCTaGAAAATGGACAGCTTTGGCTCTCTTTCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QCELCCGSPLSI*KMDSFGSLSLG Trigger: GCCCAGAGAAAGAGAGCCAAAGCTGTCCATTTTGCAGATGGACAGAGGGGACCCACAACACAGCTCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS TCA 72 bp | CAGCAGCTTAACTTTTTCTCTCTCTGGGCACCAGTGTaGGCTGTGTTGTGGGTCCCCTCTGTCCATCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QQLNFFSLWAPV*AVLWVPSVHLQ Trigger: TTGCAGATGGACAGAGGGGACCCACAACACAGCTCACACTGGTGCCCAGAGAGAGAAAAAGTTAAGCTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 72 bp | TCACCCATCACCACACTAGACGGCACTGTTAGTGGGTaGTTGGCCTGGTGTATGAACACATCCTTATCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SPITTLDGTVSG*LAWCMNTSLSK Trigger: CTTAGATAAGGATGTGTTCATACACCAGGCCAACCACCCACTAACAGTGCCGTCTAGTGTGGTGATGGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 72 bp | CTAAAGCAAGGTCTTTTGTCATCTTCTGCCAAGGTGTaGCCGTTATCACCCATCACCACACTAGACGGCACT | + |
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Preference number: 6 (lower is better) Translates to: LKQGLLSSSAKV*PLSPITTLDGT Trigger: AGTGCCGTCTAGTGTGGTGATGGGTGATAACGGCCACACCTTGGCAGAAGATGACAAAAGACCTTGCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CAA 90 bp | CCGTTATCACCCATCACCACACTAGACGGCACTGTTAGTGGGTGGTaGGCCTGGTGTATGAACACATCCTTATCTAAGTTAAAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLSPITTLDGTVSGW*AWCMNTSLSKLKAL Trigger: CAGAGCCTTTAACTTAGATAAGGATGTGTTCATACACCAGGCCAACCACCCACTAACAGTGCCGTCTAGTGTGGTGATGGGTGATAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CAA 72 bp | CCCATCACCACACTAGACGGCACTGTTAGTGGGTGGTaGGCCTGGTGTATGAACACATCCTTATCTAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: PITTLDGTVSGW*AWCMNTSLSKL Trigger: TAACTTAGATAAGGATGTGTTCATACACCAGGCCAACCACCCACTAACAGTGCCGTCTAGTGTGGTGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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| CDS CCA 72 bp | ACCACACTAGACGGCACTGTTAGTGGGTGGTTGGCCTaGTGTATGAACACATCCTTATCTAAGTTAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TTLDGTVSGWLA*CMNTSLSKLKA Trigger: AGCCTTTAACTTAGATAAGGATGTGTTCATACACCAGGCCAACCACCCACTAACAGTGCCGTCTAGTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668205.1 |
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