RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF21 (Homo sapiens)

Ensembl gene IDs: ENSG00000110665

Ensembl transcript IDs: ENST00000381153.8, ENST00000456145.2, ENST00000470369.1, ENST00000495467.1

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGGCTGACGCAGGGGTGCGGCCCACATGTGAGGGACCCTCAGGCTaGGCAGCATTGGCTGAGCCCCCACCGCACCTTCCCTCCCACCCT +
Preference number: 1 (lower is better)
Translates to: PADAGVRPTCEGPSG*AALAEPPPHLPSHP
Trigger: AGGGTGGGAGGGAAGGTGCGGTGGGGGCTCAGCCAATGCTGCCCAGCCTGAGGGTCCCTCACATGTGGGCCGCACCCCTGCGTCAGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 90 bp ACTCAGGCACCAGGCAAGGGAGGCCACCCATTGCTCCAGCTCCCGTaGCACCGTGAGCCACCGGCCAAGGCCACAGGGCTCCATGGGCTG +
Preference number: 1 (lower is better)
Translates to: TQAPGKGGHPLLQLP*HREPPAKATGLHGL
Trigger: CAGCCCATGGAGCCCTGTGGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCTTGCCTGGTGCCTGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 90 bp ACCAGGCAAGGGAGGCCACCCATTGCTCCAGCTCCCGTGGCACCGTaGGCCACCGGCCAAGGCCACAGGGCTCCATGGGCTGGACTGTTC +
Preference number: 1 (lower is better)
Translates to: TRQGRPPIAPAPVAP*ATGQGHRAPWAGLF
Trigger: GAACAGTCCAGCCCATGGAGCCCTGTGGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCTTGCCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 90 bp CCGGCCAAGGCCACAGGGCTCCATGGGCTGGACTGTTCCAATCACTaGCGGTGCCAGTTGCCATCTCAGCCACAGGCCCGGGGCCTCGTG +
Preference number: 1 (lower is better)
Translates to: PAKATGLHGLDCSNH*RCQLPSQPQARGLV
Trigger: CACGAGGCCCCGGGCCTGTGGCTGAGATGGCAACTGGCACCGGCAGTGATTGGAACAGTCCAGCCCATGGAGCCCTGTGGCCTTGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 90 bp CCCAGTCCTCCTTCACTCAGGCACCAGGCAAGGGAGGCCACCCATTaGTCCAGCTCCCGTGGCACCGTGAGCCACCGGCCAAGGCCACAG +
Preference number: 1 (lower is better)
Translates to: PSPPSLRHQAREATH*SSSRGTVSHRPRPQ
Trigger: CTGTGGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCTTGCCTGGTGCCTGAGTGAAGGAGGACTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 90 bp CGTGGCACCGTGAGCCACCGGCCAAGGCCACAGGGCTCCATGGGCTaGACTGTTCCAATCACTGCCGGTGCCAGTTGCCATCTCAGCCAC +
Preference number: 1 (lower is better)
Translates to: RGTVSHRPRPQGSMG*TVPITAGASCHLSH
Trigger: GTGGCTGAGATGGCAACTGGCACCGGCAGTGATTGGAACAGTCCAGCCCATGGAGCCCTGTGGCCTTGGCCGGTGGCTCACGGTGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 90 bp ACCTCAAACCACCCTAAGCAGAGATCACTCCGGCTGACGCAGGGGTaGGGCCCACATGTGAGGGACCCTCAGGCTGGGCAGCATTGGCTG +
Preference number: 1 (lower is better)
Translates to: TSNHPKQRSLRLTQG*GPHVRDPQAGQHWL
Trigger: CAGCCAATGCTGCCCAGCCTGAGGGTCCCTCACATGTGGGCCGCACCCCTGCGTCAGCCGGAGTGATCTCTGCTTAGGGTGGTTTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 90 bp CAGGTTCACCCCATGCCAGCCTCAGCCCAACAAGGCCTGTGCTTCTaGCCAGCACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTG +
Preference number: 1 (lower is better)
Translates to: QVHPMPASAQQGLCF*PAPLGFSGHLPFPL
Trigger: CAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTGTTGGGCTGAGGCTGGCATGGGGTGAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 90 bp GTCCCACCTCCCACCTGCACGGCCTCCAGCATTGCCCAAATTCACTaGCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTG +
Preference number: 1 (lower is better)
Translates to: VPPPTCTASSIAQIH*LHSQVHRGVSSRRV
Trigger: CACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGGCAATGCTGGAGGCCGTGCAGGTGGGAGGTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR CCA 90 bp TGCCAGCCTCAGCCCAACAAGGCCTGTGCTTCTGACCAGCACCGCTaGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCT +
Preference number: 1 (lower is better)
Translates to: CQPQPNKACASDQHR*GSQGIYPFRCSPLS
Trigger: AGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTGTTGGGCTGAGGCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR TCA 90 bp ACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTaGACACTCGTGTGTTGGGAGGCTGGTGAAGCCTGGCATTGGGGG +
Preference number: 1 (lower is better)
Translates to: TAFTPKSTEVSHPGG*TLVCWEAGEAWHWG
Trigger: CCCCCAATGCCAGGCTTCACCAGCCTCCCAACACACGAGTGTTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR TCA 90 bp GTGGGGGTCACCACCCTGCATCTTCCAAGTCCTCGATGGCGGCACTaGCCTTTGCAGTCCCTCCAGGGCTGCAGGTTGCTTTTGACTGAC +
Preference number: 1 (lower is better)
Translates to: VGVTTLHLPSPRWRH*PLQSLQGCRLLLTD
Trigger: GTCAGTCAAAAGCAACCTGCAGCCCTGGAGGGACTGCAAAGGTCAGTGCCGCCATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 90 bp TGGGCTGTGCCCTGCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTaGGACACCCCTGACCAGCTCACTCTTATTTTGTCTGCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: WAVPCLLKDCERAPN*DTPDQLTLILSALA
Trigger: GGCCAGGGCAGACAAAATAAGAGTGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGCAGGGCACAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 90 bp GCTGCCACATACGTCTGTTTACTCACCCATCTGAGGCTAGGGAAGTaGCCTCTGCACCCACCGAGGGTTGGACCTGAGCTAGAACTCCGT +
Preference number: 1 (lower is better)
Translates to: AATYVCLLTHLRLGK*PLHPPRVGPELELR
Trigger: ACGGAGTTCTAGCTCAGGTCCAACCCTCGGTGGGTGCAGAGGTCACTTCCCTAGCCTCAGATGGGTGAGTAAACAGACGTATGTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 90 bp GGGACACCCCTGACCAGCTCACTCTTATTTTGTCTGCCCTGGCCCTaGTGCTGGTGTTTGAGATATCAGAACTCACCTCAAACCACCCTA +
Preference number: 1 (lower is better)
Translates to: GTPLTSSLLFCLPWP*CWCLRYQNSPQTTL
Trigger: TAGGGTGGTTTGAGGTGAGTTCTGATATCTCAAACACCAGCATCAGGGCCAGGGCAGACAAAATAAGAGTGAGCTGGTCAGGGGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 90 bp GGAAGCACTGCAGGCTGGGCATGTAAACAGCAGGTGCTTATTTCTTaGAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATT +
Preference number: 1 (lower is better)
Translates to: GSTAGWACKQQVLIS*SSGGWKSNIKVLLI
Trigger: AATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGCTGTTTACATGCCCAGCCTGCAGTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 90 bp ATCTGCCATAAGGAAGCACTGCAGGCTGGGCATGTAAACAGCAGGTaGTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGG +
Preference number: 1 (lower is better)
Translates to: ICHKEALQAGHVNSR*LFLAVLEAGSPISR
Trigger: CCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGCTGTTTACATGCCCAGCCTGCAGTGCTTCCTTATGGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR CCA 90 bp TGGGCATGTAAACAGCAGGTGCTTATTTCTTGCAGTTCTGGAGGCTaGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: WACKQQVLISCSSGG*KSNIKVLLIPVLVR
Trigger: CCTCACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGCTGTTTACATGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR TCA 90 bp GAACTCACAGCATGTACAACAAGAAGAGTGAACCCTCATGTAACCTaGTCAATGACTAGGTCAATATTGGTTCATCAATTGCAAAGATGT +
Preference number: 1 (lower is better)
Translates to: ELTACTTRRVNPHVT*SMTRSILVHQLQRC
Trigger: ACATCTTTGCAATTGATGAACCAATATTGACCTAGTCATTGATCAGGTTACATGAGGGTTCACTCTTCTTGTTGTACATGCTGTGAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR TCA 90 bp GACAGCCCAGCAGACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCCAAGGCCTGTGCTTCTaGCCAGCACCGCTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: DSPADPKPPTEVASQGSTQGLCF*PAPLGF
Trigger: GAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTG...GGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGTCTGCTGGGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CCA 90 bp GCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCAGGGGAGCACCACTGGTaGGCTGTCAGCTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: ASLKTVSELPTGTPLTSSGEHHW*AVSSCL
Trigger: CAGGCAGGAGCTGACAGCCCACCAGTGGTGCTCCCC...TGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR GCA 90 bp ATTAGACGAGTGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGAGGGAGGCCACCCATTaGTCCAGCTCCCGTGGCACC +
Preference number: 2 (lower is better)
Translates to: IRRVERGCSGGHHPASSKREATH*SSSRGT
Trigger: GGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCT...CTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGTCTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR TCA 90 bp CCCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGCAAGGCCTGTGCTTCTaGCCAGCACCGCTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: PKFTAFTPKSTEVSHPGGQGLCF*PAPLGF
Trigger: GAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTG...CCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR GCA 90 bp GCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCACCCAGGTTCACCCCATaGCAGCCTCAGCCCAACAAG +
Preference number: 2 (lower is better)
Translates to: ASLKTVSELPTGTPLTSSPRFTP*QPQPNK
Trigger: CTTGTTGGGCTGAGGCTGGCATGGGGTGAACCTGGG...TGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CCA 90 bp ATTAGACGAGTGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGAGCCACCCCAGCAAATaGCTGCAGGTCCCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: IRRVERGCSGGHHPASSKSHPSK*LQVPEG
Trigger: CCCCTCAGGGACCTGCAGCCATTTGCTGGGGTGGCT...CTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGTCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR GCA 90 bp TGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGTCCTCGATGGCACTGGGCTGTGCCCTaGCTCCTTAAAGACTGTGAG +
Preference number: 2 (lower is better)
Translates to: WNEAAVGVTTLHLPSPRWHWAVP*LLKDCE
Trigger: CTCACAGTCTTTAAGGAGGCAGGGCACAGCCCAGTG...CCATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR GCA 90 bp TGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGTCCTCGATGGCAAATGTGGGGGCTCTaGTGGCTGCCACATACGTCT +
Preference number: 2 (lower is better)
Translates to: WNEAAVGVTTLHLPSPRWQMWGL*WLPHTS
Trigger: AGACGTATGTGGCAGCCAGCAGAGCCCCCACATTTG...CCATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR GCA 90 bp GTATGGCAAGGTCCTTCCTCAGGGGCACCCAGTCCTCCTTCACTCAGGCACCAGGACTGTTCCAATCACTaGCGGTGCCAGTTGCCATCT +
Preference number: 2 (lower is better)
Translates to: VWQGPSSGAPSPPSLRHQDCSNH*RCQLPS
Trigger: AGATGGCAACTGGCACCGGCAGTGATTGGAACAGTC...CTGGTGCCTGAGTGAAGGAGGACTGGGTGCCCCTGAGGAAGGACCTTGCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CCA 90 bp ATTAGACGAGTGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGCAGGGCTCCATGGGCTaGACTGTTCCAATCACTGCC +
Preference number: 2 (lower is better)
Translates to: IRRVERGCSGGHHPASSKQGSMG*TVPITA
Trigger: GGCAGTGATTGGAACAGTCCAGCCCATGGAGCCCTG...CTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGTCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR TCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTACATACAGCTGTCCTCTaGTGGACAGAAAAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLHTAVL*WTEKGP
Trigger: GGGACCCTTTTCTGTCCATCAGAGGACAGCTGTATG...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CCA 90 bp ACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTTGCAGTTCTGGAGGCTaGAAGTCCAATATCAAGGTG +
Preference number: 2 (lower is better)
Translates to: TPSHPLRLLLRGAPLVGCCSSGG*KSNIKV
Trigger: CACCTTGATATTGGACTTCCAGCCTCCAGAACTGCA...ACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR GCA 90 bp GTATGGCAAGGTCCTTCCTCAGGGGCACCCAGTCCTCCTTCACTCAGGCACCAGATTGCCCAAATTCACTaGCTTCACTCCCAAGTCCAC +
Preference number: 2 (lower is better)
Translates to: VWQGPSSGAPSPPSLRHQIAQIH*LHSQVH
Trigger: GTGGACTTGGGAGTGAAGGCAGTGAATTTGGGCAAT...CTGGTGCCTGAGTGAAGGAGGACTGGGTGCCCCTGAGGAAGGACCTTGCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CCA 90 bp TGTTTGAGATATCAGAACTCACCTCAAACCACCCTAAGCAGAGATCACTCCGGCGAGGGACCCTCAGGCTaGGCAGCATTGGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: CLRYQNSPQTTLSRDHSGEGPSG*AALAEP
Trigger: GGGCTCAGCCAATGCTGCCCAGCCTGAGGGTCCCTC...GCCGGAGTGATCTCTGCTTAGGGTGGTTTGAGGTGAGTTCTGATATCTCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CAA 90 bp TACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCACACGTaGCTGGGGGCAGTGTGTGTGACTCACTGCTTCCCAGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: YPFRCSPLSLNIFHT*LGAVCVTHCFPEPA
Trigger: GGCTGGCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR CAA 90 bp GAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCACTCTTATTTaGTCTGCCCTGGCCCTGATGCTGGTGTTTGAGATATCAGAACTC +
Preference number: 2 (lower is better)
Translates to: ERAPNWDTPDQLTLI*SALALMLVFEISEL
Trigger: GAGTTCTGATATCTCAAACACCAGCATCAGGGCCAGGGCAGACAAAATAAGAGTGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR TCA 90 bp ACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCTCTGGGGGCAGTGTGTGTaGCTCACTGCTTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: THLPSLSHCLETPHIYHLWGQCV*LTASQS
Trigger: GCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCA...GAGGTGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR GCA 90 bp GCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCACCTTCTTTGTCTCACTaGCTTGAAACACCCCACATC +
Preference number: 2 (lower is better)
Translates to: ASLKTVSELPTGTPLTSSPSLSH*LETPHI
Trigger: GATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGG...TGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR GCA 90 bp CCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTTGGCTTACAGATGGCTaGCTTCTCTCTGTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: PNSLPSLPSPQRCLIQAGWLTDG*LLSVSS
Trigger: TGAAGACACAGAGAGAAGGCAGCCATCTGTAAGCCA...ACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CCA 90 bp ATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACTGCAGTTCTGGAGGCTaGAAGTCCAATATCAAGGTG +
Preference number: 2 (lower is better)
Translates to: IHCLHSQVHRGVSSRRVNCSSGG*KSNIKV
Trigger: CACCTTGATATTGGACTTCCAGCCTCCAGAACTGCA...GTTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CCA 90 bp TGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGTCCTCGATGGTATTTCTTGCAGTTCTaGAGGCTGGAAGTCCAATAT +
Preference number: 2 (lower is better)
Translates to: WNEAAVGVTTLHLPSPRWYFLQF*RLEVQY
Trigger: ATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATA...CCATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CCA 90 bp TGTTTGAGATATCAGAACTCACCTCAAACCACCCTAAGCAGAGATCACTCCGGCGACACTGCTGGCAACTaGTCACCCAGAGAGCATGGG +
Preference number: 2 (lower is better)
Translates to: CLRYQNSPQTTLSRDHSGDTAGN*SPREHG
Trigger: CCCATGCTCTCTGGGTGACCAGTTGCCAGCAGTGTC...GCCGGAGTGATCTCTGCTTAGGGTGGTTTGAGGTGAGTTCTGATATCTCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR TCA 90 bp ATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACTTTGTCTCACTGCCTTaGAACACCCCACATCTATCA +
Preference number: 2 (lower is better)
Translates to: IHCLHSQVHRGVSSRRVNFVSLP*NTPHLS
Trigger: TGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAA...GTTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR TCA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGCATACAGCTGTCCTCTaGTGGACAGAAAAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLHTAVL*WTEKGP
Trigger: GGGACCCTTTTCTGTCCATCAGAGGACAGCTGTATG...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR GCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCTGGCTTACAGATGGCTaGCTTCTCTCTGTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: APPISLLCLTALKHPTSIWLTDG*LLSVSS
Trigger: TGAAGACACAGAGAGAAGGCAGCCATCTGTAAGCCA...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR GCA 90 bp TACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCACACGTTGCTGGGGCAGGTGCTTATTTCTTaGAGTTCTGGAGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: YPFRCSPLSLNIFHTLLGQVLIS*SSGGWK
Trigger: CTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG...CCCCAGCAACGTGTGAAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CCA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAATATTTCTTGCAGTTCTaGAGGCTGGAAGTCCAATAT +
Preference number: 2 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGEYFLQF*RLEVQY
Trigger: ATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATA...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR TCA 90 bp TACACATTTGCCCGAACTCACAGCATGTACAACAAGAAGAGTGAACCCTCATGTCAACTGGGACACCCCTaGCCAGCTCACTCTTATTTT +
Preference number: 2 (lower is better)
Translates to: YTFARTHSMYNKKSEPSCQLGHP*PAHSYF
Trigger: AAAATAAGAGTGAGCTGGTCAGGGGTGTCCCAGTTG...ACATGAGGGTTCACTCTTCTTGTTGTACATGCTGTGAGTTCGGGCAAATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CCA 90 bp ATAATTCTGTGTGACACTGTAATAGTGGAGATATGCCATTACACATTTGCCCGAGGAAGCACTGCAGGCTaGGCATGTAAACAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: IILCDTVIVEICHYTFARGSTAG*ACKQQV
Trigger: CACCTGCTGTTTACATGCCCAGCCTGCAGTGCTTCC...TCGGGCAAATGTGTAATGGCATATCTCCACTATTACAGTGTCACACAGAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR GCA 90 bp GGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCATGTAAACAGCAGGTaGTTATTTCTTGCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: GSQGIYPFRCSPLSLNIFHVNSR*LFLAVL
Trigger: CAGAACTGCAAGAAATAAGCACCTGCTGTTTACATG...AAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR TCA 90 bp ATAATTCTGTGTGACACTGTAATAGTGGAGATATGCCATTACACATTTGCCCGAGCTGCAGGTTGCTTTTaGCTGACAATTTTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: IILCDTVIVEICHYTFARAAGCF*LTIFLG
Trigger: GCCTAGGAAAATTGTCAGTCAAAAGCAACCTGCAGC...TCGGGCAAATGTGTAATGGCATATCTCCACTATTACAGTGTCACACAGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 72 bp GCAGGGGTGCGGCCCACATGTGAGGGACCCTCAGGCTaGGCAGCATTGGCTGAGCCCCCACCGCACCTTCCC +
Preference number: 3 (lower is better)
Translates to: AGVRPTCEGPSG*AALAEPPPHLP
Trigger: GGGAAGGTGCGGTGGGGGCTCAGCCAATGCTGCCCAGCCTGAGGGTCCCTCACATGTGGGCCGCACCCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 72 bp CCAGGCAAGGGAGGCCACCCATTGCTCCAGCTCCCGTaGCACCGTGAGCCACCGGCCAAGGCCACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: PGKGGHPLLQLP*HREPPAKATGL
Trigger: GAGCCCTGTGGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCTTGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 72 bp CCTTCACTCAGGCACCAGGCAAGGGAGGCCACCCATTaGTCCAGCTCCCGTGGCACCGTGAGCCACCGGCCA +
Preference number: 3 (lower is better)
Translates to: PSLRHQAREATH*SSSRGTVSHRP
Trigger: TGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCTTGCCTGGTGCCTGAGTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 72 bp GGGCTCCATGGGCTGGACTGTTCCAATCACTGCCGGTaGCAGTTGCCATCTCAGCCACAGGCCCGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: GLHGLDCSNHCR*QLPSQPQARGL
Trigger: GAGGCCCCGGGCCTGTGGCTGAGATGGCAACTGGCACCGGCAGTGATTGGAACAGTCCAGCCCATGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 72 bp CCCATGCCAGCCTCAGCCCAACAAGGCCTGTGCTTCTaGCCAGCACCGCTGGGGTTCTCAGGGCATCTACCC +
Preference number: 3 (lower is better)
Translates to: PMPASAQQGLCF*PAPLGFSGHLP
Trigger: GGGTAGATGCCCTGAGAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTGTTGGGCTGAGGCTGGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 72 bp ACGAGTGGAACGAGGCTGCAGTGGGGGTCACCACCCTaGATCTTCCAAGTCCTCGATGGCGGCACTGACCTT +
Preference number: 3 (lower is better)
Translates to: TSGTRLQWGSPP*IFQVLDGGTDL
Trigger: AAGGTCAGTGCCGCCATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 72 bp ACCACCCTGCATCTTCCAAGTCCTCGATGGCGGCACTaGCCTTTGCAGTCCCTCCAGGGCTGCAGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: TTLHLPSPRWRH*PLQSLQGCRLL
Trigger: AAGCAACCTGCAGCCCTGGAGGGACTGCAAAGGTCAGTGCCGCCATCGAGGACTTGGAAGATGCAGGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CAA 90 bp GACAGCCCAGCAGACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCCTTTGTCTCACTGCCTaGAAACACCCCACATCTATC +
Preference number: 3 (lower is better)
Translates to: DSPADPKPPTEVASQGSTLCLTA*KHPTSI
Trigger: GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAG...GGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGTCTGCTGGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 72 bp CCCACCTGCACGGCCTCCAGCATTGCCCAAATTCACTaGCTTCACTCCCAAGTCCACAGAGGTGTCTCATCC +
Preference number: 3 (lower is better)
Translates to: PTCTASSIAQIH*LHSQVHRGVSS
Trigger: GGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGGCAATGCTGGAGGCCGTGCAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 72 bp CCCCACCCTCAGGTCAGGGAACAAATGTGGGGGCTCTaGTGGCTGCCACATACGTCTGTTTACTCACCCATC +
Preference number: 3 (lower is better)
Translates to: PHPQVREQMWGL*WLPHTSVYSPI
Trigger: GATGGGTGAGTAAACAGACGTATGTGGCAGCCAGCAGAGCCCCCACATTTGTTCCCTGACCTGAGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 72 bp ACACTCGTGTGTTGGGAGGCTGGTGAAGCCTGGCATTaGGGGGCACCACCCATCTCCCTTCTTTGTCTCACT +
Preference number: 3 (lower is better)
Translates to: TLVCWEAGEAWH*GAPPISLLCLT
Trigger: AGTGAGACAAAGAAGGGAGATGGGTGGTGCCCCCCAATGCCAGGCTTCACCAGCCTCCCAACACACGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 72 bp CTTCCACACAAGCCAATTAGACGAGTGGAACGAGGCTaGAGTGGGGGTCACCACCCTGCATCTTCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: LPHKPIRRVERG*SGGHHPASSKS
Trigger: GGACTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGTCTAATTGGCTTGTGTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CAA 90 bp ATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACCTGCTGATTCCAGTCTaGGTGAGGGCTCTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: IHCLHSQVHRGVSSRRVNLLIPV*VRALFL
Trigger: CAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAG...GTTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR TCA 72 bp TACGTCTGTTTACTCACCCATCTGAGGCTAGGGAAGTaGCCTCTGCACCCACCGAGGGTTGGACCTGAGCTA +
Preference number: 3 (lower is better)
Translates to: YVCLLTHLRLGK*PLHPPRVGPEL
Trigger: TAGCTCAGGTCCAACCCTCGGTGGGTGCAGAGGTCACTTCCCTAGCCTCAGATGGGTGAGTAAACAGACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 72 bp TTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTaGTTCCCAGAGCCAGCCCAGAGCTGTTTAGTAGAC +
Preference number: 3 (lower is better)
Translates to: FHTLLGAVCVTH*FPEPAQSCLVD
Trigger: GTCTACTAAACAGCTCTGGGCTGGCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CAA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACTGCTGATTCCAGTCTaGGTGAGGGCTCTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGELLIPV*VRALFL
Trigger: CAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAG...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR CCA 72 bp CCCTGCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTaGGACACCCCTGACCAGCTCACTCTTATTTTGTCT +
Preference number: 3 (lower is better)
Translates to: PCLLKDCERAPN*DTPDQLTLILS
Trigger: AGACAAAATAAGAGTGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR-3UTR CAA 90 bp CCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTAACATATTTCACACGTaGCTGGGGGCAGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: PNSLPSLPSPQRCLIQAGNIFHT*LGAVCV
Trigger: CACACACACTGCCCCCAGCAACGTGTGAAATATGTT...ACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CAA 90 bp CCTAGGCAGAGTTCACCCCAATGGCTTCCACCTGGCCTTTCCCAGCATAGTAGCACCCATCTCCCTTCTTaGTCTCACTGCCTTGAAACA +
Preference number: 3 (lower is better)
Translates to: PRQSSPQWLPPGLSQHSSTHLPS*SHCLET
Trigger: TGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT...GCTACTATGCTGGGAAAGGCCAGGTGGAAGCCATTGGGGTGAACTCTGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CCA 72 bp TTGACTGACAATTTTCCTAGGCAGAGTTCACCCCAATaGCTTCCACCTGGCCTTTCCCAGCATAGTAGCCCC +
Preference number: 3 (lower is better)
Translates to: LTDNFPRQSSPQ*LPPGLSQHSSP
Trigger: GGGGCTACTATGCTGGGAAAGGCCAGGTGGAAGCCATTGGGGTGAACTCTGCCTAGGAAAATTGTCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR GCA 72 bp AAGGAAGCACTGCAGGCTGGGCATGTAAACAGCAGGTaGTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCA +
Preference number: 3 (lower is better)
Translates to: KEALQAGHVNSR*LFLAVLEAGSP
Trigger: TGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGCTGTTTACATGCCCAGCCTGCAGTGCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 72 bp AATGAGTGCTGGGAGCTGTCTCAGTTAGCTCCAATCTaGCATAAGGAAGCACTGCAGGCTGGGCATGTAAAC +
Preference number: 3 (lower is better)
Translates to: NECWELSQLAPI*HKEALQAGHVN
Trigger: GTTTACATGCCCAGCCTGCAGTGCTTCCTTATGGCAGATTGGAGCTAACTGAGACAGCTCCCAGCACTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR-3UTR CAA 90 bp CATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCTCTGCGCAGGTGCTTATTTCTaGCAGTTCTGGAGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: HLPSLSHCLETPHIYHLCAGAYF*QFWRLE
Trigger: TTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGC...GCAGAGGTGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR GCA 72 bp GCAGGCTGGGCATGTAAACAGCAGGTGCTTATTTCTTaGAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTG +
Preference number: 3 (lower is better)
Translates to: AGWACKQQVLIS*SSGGWKSNIKV
Trigger: CACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGCTGTTTACATGCCCAGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR TCA 72 bp CTGACCAGCTCACTCTTATTTTGTCTGCCCTGGCCCTaGTGCTGGTGTTTGAGATATCAGAACTCACCTCAA +
Preference number: 3 (lower is better)
Translates to: LTSSLLFCLPWP*CWCLRYQNSPQ
Trigger: TTGAGGTGAGTTCTGATATCTCAAACACCAGCATCAGGGCCAGGGCAGACAAAATAAGAGTGAGCTGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR TCA 72 bp GCATGTACAACAAGAAGAGTGAACCCTCATGTAACCTaGTCAATGACTAGGTCAATATTGGTTCATCAATTG +
Preference number: 3 (lower is better)
Translates to: ACTTRRVNPHVT*SMTRSILVHQL
Trigger: CAATTGATGAACCAATATTGACCTAGTCATTGATCAGGTTACATGAGGGTTCACTCTTCTTGTTGTACATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GGAGGCCACCCATTGCTCCAGCTCCCGTGGCACCGTGAGCCACCGGCCAAGGCCTTGCTCCAGCTCCCGTaGCACCGTGAGCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: GGHPLLQLPWHREPPAKALLQLP*HREPPA
Trigger: GGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAA...GGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GGAGGCCACCCATTGCTCCAGCTCCCGTGGCACCGTGAGCCACCGGCCAAGGCCGAGGGACCCTCAGGCTaGGCAGCATTGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGHPLLQLPWHREPPAKAEGPSG*AALAEP
Trigger: GGGCTCAGCCAATGCTGCCCAGCCTGAGGGTCCCTC...GGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GGAGGCCACCCATTGCTCCAGCTCCCGTGGCACCGTGAGCCACCGGCCAAGGCCAGCCACCCCAGCAAATaGCTGCAGGTCCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGHPLLQLPWHREPPAKASHPSK*LQVPEG
Trigger: CCCCTCAGGGACCTGCAGCCATTTGCTGGGGTGGCT...GGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GACAGCCCAGCAGACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCCTGTCAGCTCCTGCCTaGGCCCCGGCCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: DSPADPKPPTEVASQGSTLSAPA*APASCP
Trigger: GGGGCAAGAGGCCGGGGCCCAGGCAGGAGCTGACAG...GGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGTCTGCTGGGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp ACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTGGGCCTCCTGGTCTCTaGAGGGCCAGCCGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TPSHPLRLLLRGAPLVGCGPPGL*RASRGF
Trigger: GAACCCCCGGCTGGCCCTCCAGAGACCAGGAGGCCC...ACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
3UTR CAA 72 bp CATGGGCTGGACTGTTCCAATCACTGCCGGTGCCAGTaGCCATCTCAGCCACAGGCCCGGGGCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HGLDCSNHCRCQ*PSQPQARGLVA
Trigger: GGCCACGAGGCCCCGGGCCTGTGGCTGAGATGGCAACTGGCACCGGCAGTGATTGGAACAGTCCAGCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp AGTCCTCCTTCACTCAGGCACCAGGCAAGGGAGGCCACCCATTGCTCCAGCTCCCGGCTGACGCAGGGGTaGGGCCCACATGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SPPSLRHQAREATHCSSSRLTQG*GPHVRD
Trigger: GTCCCTCACATGTGGGCCGCACCCCTGCGTCAGCCG...GGAGCTGGAGCAATGGGTGGCCTCCCTTGCCTGGTGCCTGAGTGAAGGAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp GACAGCCCAGCAGACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCCAGGAAGGTAGAGGCTaGCACCTCCTGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: DSPADPKPPTEVASQGSTQEGRG*HLLARG
Trigger: TCCTCGGGCCAGGAGGTGGCAGCCTCTACCTTCCTG...GGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGTCTGCTGGGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp ACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTAGGGAGGCCACCCATTaGTCCAGCTCCCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: TPSHPLRLLLRGAPLVGCREATH*SSSRGT
Trigger: GGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCT...ACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp ATTAGACGAGTGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGAGGCCCGGGGCCTCGTaGCCACCCCCACTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IRRVERGCSGGHHPASSKRPGAS*PPPLGC
Trigger: ACAGCCCAGTGGGGGTGGCCACGAGGCCCCGGGCCT...CTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGTCTAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTAAGAGATCACTCCGGCTaGCGCAGGGGTGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLRDHSG*RRGAAH
Trigger: GTGGGCCGCACCCCTGCGTCAGCCGGAGTGATCTCT...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp GGAGGCCACCCATTGCTCCAGCTCCCGTGGCACCGTGAGCCACCGGCCAAGGCCCAACTGGGACACCCCTaGCCAGCTCACTCTTATTTT +
Preference number: 4 (lower is better)
Translates to: GGHPLLQLPWHREPPAKAQLGHP*PAHSYF
Trigger: AAAATAAGAGTGAGCTGGTCAGGGGTGTCCCAGTTG...GGCCTTGGCCGGTGGCTCACGGTGCCACGGGAGCTGGAGCAATGGGTGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp ACGTTGCTGGGGGCAGTGTGTGTGACTCACTGCTTCCCAGAGCCAGCCCAGAGCCAGCGCCGTCCTCAGTaGCCACACCAAGAACGAGGC +
Preference number: 4 (lower is better)
Translates to: TLLGAVCVTHCFPEPAQSQRRPQ*PHQERG
Trigger: GCCTCGTTCTTGGTGTGGCCACTGAGGACGGCGCTG...GCTCTGGGCTGGCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCAGCAACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp GTATGGCAAGGTCCTTCCTCAGGGGCACCCAGTCCTCCTTCACTCAGGCACCAGGAGCGAGCTCCCAACTaGGACACCCCTGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VWQGPSSGAPSPPSLRHQERAPN*DTPDQL
Trigger: GAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTC...CTGGTGCCTGAGTGAAGGAGGACTGGGTGCCCCTGAGGAAGGACCTTGCCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GACAGCCCAGCAGACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCGGCCACAGGGCTCCATaGGCTGGACTGTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: DSPADPKPPTEVASQGSTGHRAP*AGLFQS
Trigger: TGATTGGAACAGTCCAGCCCATGGAGCCCTGTGGCC...GGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGTCTGCTGGGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTACCCCAAGCCACCCACTaGGGTTGCTTCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLPQATH*GCFSGE
Trigger: CTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGG...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp ACGTTGCTGGGGGCAGTGTGTGTGACTCACTGCTTCCCAGAGCCAGCCCAGAGCACCCCCACTGGGCTGTaGCCTGCCTCCTTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TLLGAVCVTHCFPEPAQSTPTGL*PASLKT
Trigger: AGTCTTTAAGGAGGCAGGGCACAGCCCAGTGGGGGT...GCTCTGGGCTGGCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCAGCAACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp TGGGCTGTGCCCTGCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCACCCCAGCAAATGGCTaGAGGTCCCTGAGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: WAVPCLLKDCERAPNWDTTPANG*RSLRGD
Trigger: GTCTCCCCTCAGGGACCTGCAGCCATTTGCTGGGGT...GGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGCAGGGCACAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GACAGCCCAGCAGACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCGAGGCCATGTCTTCCTaGGAAGGGCCTCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: DSPADPKPPTEVASQGSTEAMSS*EGPQMS
Trigger: TGACATCTGAGGCCCTTCCCAGGAAGACATGGCCTC...GGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGTCTGCTGGGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTAGGTGAAGCCTGGCATTaGGGGGCACCACCCATCTCC +
Preference number: 4 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLGEAWH*GAPPIS
Trigger: GGAGATGGGTGGTGCCCCCCAATGCCAGGCTTCACC...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCGGTGCGGCCCACATGTaGGGGACCCTCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: APPISLLCLTALKHPTSIGAAHM*GTLRLG
Trigger: GCCCAGCCTGAGGGTCCCTCACATGTGGGCCGCACC...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCCTGTCAGCTCCTGCCTaGGCCCCGGCCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: APPISLLCLTALKHPTSILSAPA*APASCP
Trigger: GGGGCAAGAGGCCGGGGCCCAGGCAGGAGCTGACAG...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGGGGAGCACCACTGGTaGGCTGTCAGCTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PNSLPSLPSPQRCLIQAGGEHHW*AVSSCL
Trigger: CAGGCAGGAGCTGACAGCCCACCAGTGGTGCTCCCC...ACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp GTATGGCAAGGTCCTTCCTCAGGGGCACCCAGTCCTCCTTCACTCAGGCACCAGGACACTGCTGGCAACTaGTCACCCAGAGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: VWQGPSSGAPSPPSLRHQDTAGN*SPREHG
Trigger: CCCATGCTCTCTGGGTGACCAGTTGCCAGCAGTGTC...CTGGTGCCTGAGTGAAGGAGGACTGGGTGCCCCTGAGGAAGGACCTTGCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp ACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTCATACAGCTGTCCTCTaGTGGACAGAAAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TPSHPLRLLLRGAPLVGCHTAVL*WTEKGP
Trigger: GGGACCCTTTTCTGTCCATCAGAGGACAGCTGTATG...ACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GCCCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGCCCAGGTTCACCCCATaGCAGCCTCAGCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: AQIHCLHSQVHRGVSSRRPRFTP*QPQPNK
Trigger: CTTGTTGGGCTGAGGCTGGCATGGGGTGAACCTGGG...CCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACACTCGCAGGTTCATGAGCGGTaGCAGGTGGAACAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPSLPSPQRCLIQAGEHSQVHER*QVEQGH
Trigger: GTGCCCTTGTTCCACCTGCCACCGCTCATGAACCTG...CGAGTGTTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAAGGGGAGCACCACTGGTaGGCTGTCAGCTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGEGEHHW*AVSSCL
Trigger: CAGGCAGGAGCTGACAGCCCACCAGTGGTGCTCCCC...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp GTATGGCAAGGTCCTTCCTCAGGGGCACCCAGTCCTCCTTCACTCAGGCACCAGCATACAGCTGTCCTCTaGTGGACAGAAAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VWQGPSSGAPSPPSLRHQHTAVL*WTEKGP
Trigger: GGGACCCTTTTCTGTCCATCAGAGGACAGCTGTATG...CTGGTGCCTGAGTGAAGGAGGACTGGGTGCCCCTGAGGAAGGACCTTGCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACAAGGCCTGTGCTTCTaGCCAGCACCGCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGEQGLCF*PAPLGF
Trigger: GAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTG...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp TACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCACACGTTGCTGGGGCTGGGCAGCATTGGCTaGGCCCCCACCGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: YPFRCSPLSLNIFHTLLGLGSIG*APTAPS
Trigger: GGAAGGTGCGGTGGGGGCTCAGCCAATGCTGCCCAG...CCCCAGCAACGTGTGAAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTATGGCTGCAGGTCCCTaGGGGGAGACTGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PNSLPSLPSPQRCLIQAGMAAGP*GETGER
Trigger: TCTTTCCCCAGTCTCCCCTCAGGGACCTGCAGCCAT...ACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp AGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGTGGGCTGTCAGCTCCTaGCTGGGCCCCGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSGGWKSNIKVLLIPVLVWAVSS*LGPGLL
Trigger: CAAGAGGCCGGGGCCCAGGCAGGAGCTGACAGCCCA...CACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCACAGTCCCTCCAGGGCTaGAGGTTGCTTTTGACTGAC +
Preference number: 4 (lower is better)
Translates to: ASLKTVSELPTGTPLTSSQSLQG*RLLLTD
Trigger: GTCAGTCAAAAGCAACCTGCAGCCCTGGAGGGACTG...TGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp ACTGTCTCTAAACATATTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTGGGGCCTCCTGGTCTCTaGAGGGCCAGCCGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TVSKHISHVAGGSVCDSLGPPGL*RASRGF
Trigger: GAACCCCCGGCTGGCCCTCCAGAGACCAGGAGGCCC...CAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp TGGGCTGTGCCCTGCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCAAGCCAGTGCAGAGCTaGGTGATCCACAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: WAVPCLLKDCERAPNWDTKPVQS*VIHRFM
Trigger: CATGAACCTGTGGATCACCCAGCTCTGCACTGGCTT...GGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGCAGGGCACAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTAGGAAGCACTGCAGGCTaGGCATGTAAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLGSTAG*ACKQQV
Trigger: CACCTGCTGTTTACATGCCCAGCCTGCAGTGCTTCC...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTATCAGATGTCAGCAAATaGCCTGGTGTCTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLSDVSK*PGVLGW
Trigger: CCAGCCCAAGACACCAGGGCATTTGCTGACATCTGA...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp TACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCACACGTTGCTGGGGGTCCCACCTCCCACCTaGACGGCCTCCAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: YPFRCSPLSLNIFHTLLGVPPPT*TASSIA
Trigger: GGCAATGCTGGAGGCCGTGCAGGTGGGAGGTGGGAC...CCCCAGCAACGTGTGAAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGTGGGCTGTCAGCTCCTaGCTGGGCCCCGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLWAVSS*LGPGLL
Trigger: CAAGAGGCCGGGGCCCAGGCAGGAGCTGACAGCCCA...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp ATTAGACGAGTGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGTCCAATCACTGCCGGTaGCAGTTGCCATCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: IRRVERGCSGGHHPASSKSNHCR*QLPSQP
Trigger: TGGCTGAGATGGCAACTGGCACCGGCAGTGATTGGA...CTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCACTCGTCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp GGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCCCAGAAGCGGGTGGTaGTCCAGGCCCGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GSQGIYPFRCSPLSLNIFPRSGW*SRPASP
Trigger: TGGTGAGGCGGGCCTGGAGCACCACCCGCTTCTGGG...AAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456145.2
CDS-3UTR CCA 90 bp TATCAAGGTGCTGCTGATTCCAGTCTTGGTGAGGGCTCTCTTCCTGGCTTACAGCAGCGCCGTCCTCAGTaGCCACACCAAGAACGAGGC +
Preference number: 4 (lower is better)
Translates to: YQGAADSSLGEGSLPGLQQRRPQ*PHQERG
Trigger: GCCTCGTTCTTGGTGTGGCCACTGAGGACGGCGCTG...CTGTAAGCCAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAGCACCTTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACAAGTGAGGCCACCTaGGCACAGCGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: APPISLLCLTALKHPTSITSEAT*AQRSSS
Trigger: GGAGGAGGAGCGCTGTGCCCAGGTGGCCTCACTTGT...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp CCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTTCTGACCAGCACCGCTaGGGTTCTCAGGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: PNSLPSLPSPQRCLIQAGSDQHR*GSQGIY
Trigger: GTAGATGCCCTGAGAACCCCAGCGGTGCTGGTCAGA...ACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGCAGGCTGGGCAGCATTaGCTGAGCCCCCACCGCACC +
Preference number: 4 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLQAGQH*LSPHRT
Trigger: GGTGCGGTGGGGGCTCAGCCAATGCTGCCCAGCCTG...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp CCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTCAGGGCTCCATGGGCTaGACTGTTCCAATCACTGCC +
Preference number: 4 (lower is better)
Translates to: PNSLPSLPSPQRCLIQAGQGSMG*TVPITA
Trigger: GGCAGTGATTGGAACAGTCCAGCCCATGGAGCCCTG...ACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp ACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCTCACCAGGTCCTGCCCATaGCTTTCCCCCTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: THLPSLSHCLETPHIYHLTRSCP*LSPSQR
Trigger: GCGCTGAGAGGGGGAAAGTCATGGGCAGGACCTGGT...GAGGTGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCTGGGGGCAGTGTGTGTaGCTCACTGCTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: APPISLLCLTALKHPTSIWGQCV*LTASQS
Trigger: GCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCA...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp AGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGCAAGGCCTGTGCTTCTaGCCAGCACCGCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSGGWKSNIKVLLIPVLVQGLCF*PAPLGF
Trigger: GAACCCCAGCGGTGCTGGTCAGAAGCACAGGCCTTG...CACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GTATGGCAAGGTCCTTCCTCAGGGGCACCCAGTCCTCCTTCACTCAGGCACCAGTGGCTTACAGATGGCTaGCTTCTCTCTGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VWQGPSSGAPSPPSLRHQWLTDG*LLSVSS
Trigger: TGAAGACACAGAGAGAAGGCAGCCATCTGTAAGCCA...CTGGTGCCTGAGTGAAGGAGGACTGGGTGCCCCTGAGGAAGGACCTTGCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp TATCAAGGTGCTGCTGATTCCAGTCTTGGTGAGGGCTCTCTTCCTGGCTTACAGCCCAGGTTCACCCCATaGCAGCCTCAGCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: YQGAADSSLGEGSLPGLQPRFTP*QPQPNK
Trigger: CTTGTTGGGCTGAGGCTGGCATGGGGTGAACCTGGG...CTGTAAGCCAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAGCACCTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGGTCCCACCTCCCACCTaGACGGCCTCCAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLVPPPT*TASSIA
Trigger: GGCAATGCTGGAGGCCGTGCAGGTGGGAGGTGGGAC...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GCCCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGACTGTTCCAATCACTaGCGGTGCCAGTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: AQIHCLHSQVHRGVSSRRDCSNH*RCQLPS
Trigger: AGATGGCAACTGGCACCGGCAGTGATTGGAACAGTC...CCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGACCAGGTCCTGCCCATaGCTTTCCCCCTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLTRSCP*LSPSQR
Trigger: GCGCTGAGAGGGGGAAAGTCATGGGCAGGACCTGGT...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp ACTGTCTCTAAACATATTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTGTGCAGGTGGCATCATTaGGCCAGGGGCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TVSKHISHVAGGSVCDSLCRWHH*ARGLLV
Trigger: GACCAGGAGGCCCCTGGCTCAATGATGCCACCTGCA...CAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp TGGAACGAGGCTGCAGTGGGGGTCACCACCCTGCATCTTCCAAGTCCTCGATGGTTTGTCTCACTGCCTTaGAACACCCCACATCTATCA +
Preference number: 4 (lower is better)
Translates to: WNEAAVGVTTLHLPSPRWFVSLP*NTPHLS
Trigger: TGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAA...CCATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCCCCAAGCCACCCACTaGGGTTGCTTCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLPQATH*GCFSGE
Trigger: CTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGG...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGCAGGAAGGTAGAGGCTaGCACCTCCTGGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLQEGRG*HLLARG
Trigger: TCCTCGGGCCAGGAGGTGGCAGCCTCTACCTTCCTG...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp AGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGCACATCTATCACCTCTaGCCCCGAGGCTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSGGWKSNIKVLLIPVLVHIYHL*PRGSPG
Trigger: ACCTGGGGAGCCTCGGGGGCAGAGGTGATAGATGTG...CACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp TGTTTGAGATATCAGAACTCACCTCAAACCACCCTAAGCAGAGATCACTCCGGCACTGCCGGTGCCAGTTaGCATCTCAGCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: CLRYQNSPQTTLSRDHSGTAGAS*HLSHRP
Trigger: GGGCCTGTGGCTGAGATGGCAACTGGCACCGGCAGT...GCCGGAGTGATCTCTGCTTAGGGTGGTTTGAGGTGAGTTCTGATATCTCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GCAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGGTGAAGCCTGGCATTaGGGGGCACCACCCATCTCC +
Preference number: 4 (lower is better)
Translates to: AGAYFLQFWRLEVQYQGAGEAWH*GAPPIS
Trigger: GGAGATGGGTGGTGCCCCCCAATGCCAGGCTTCACC...AGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp ACTGTCTCTAAACATATTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTGGGAACGAGGCTGCAGTaGGGGTCACCACCCTGCATC +
Preference number: 4 (lower is better)
Translates to: TVSKHISHVAGGSVCDSLGTRLQ*GSPPCI
Trigger: GATGCAGGGTGGTGACCCCCACTGCAGCCTCGTTCC...CAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAAAGCCAATTAGACGAGTaGAACGAGGCTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGESQLDE*NEAAVG
Trigger: CCCCACTGCAGCCTCGTTCCACTCGTCTAATTGGCT...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CAA 72 bp CCCAACTGGGACACCCCTGACCAGCTCACTCTTATTTaGTCTGCCCTGGCCCTGATGCTGGTGTTTGAGATA +
Preference number: 4 (lower is better)
Translates to: PNWDTPDQLTLI*SALALMLVFEI
Trigger: TATCTCAAACACCAGCATCAGGGCCAGGGCAGACAAAATAAGAGTGAGCTGGTCAGGGGTGTCCCAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp ACTGTCTCTAAACATATTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTGCACATCTATCACCTCTaGCCCCGAGGCTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVSKHISHVAGGSVCDSLHIYHL*PRGSPG
Trigger: ACCTGGGGAGCCTCGGGGGCAGAGGTGATAGATGTG...CAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp CCCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGCCTTCTTTGTCTCACTaGCTTGAAACACCCCACATC +
Preference number: 4 (lower is better)
Translates to: PKFTAFTPKSTEVSHPGGPSLSH*LETPHI
Trigger: GATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGG...CCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCGAGGCCATGTCTTCCTaGGAAGGGCCTCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: APPISLLCLTALKHPTSIEAMSS*EGPQMS
Trigger: TGACATCTGAGGCCCTTCCCAGGAAGACATGGCCTC...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGATGAGCGGTGGCAGGTaGAACAAGGGCACCATGGGC +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLMSGGR*NKGTMG
Trigger: GCCCATGGTGCCCTTGTTCCACCTGCCACCGCTCAT...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAAAAGCCAGTGCAGAGCTaGGTGATCCACAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGEKPVQS*VIHRFM
Trigger: CATGAACCTGTGGATCACCCAGCTCTGCACTGGCTT...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CCTAGGCAGAGTTCACCCCAATGGCTTCCACCTGGCCTTTCCCAGCATAGTAGCTGCAGTTCTGGAGGCTaGAAGTCCAATATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PRQSSPQWLPPGLSQHSSCSSGG*KSNIKV
Trigger: CACCTTGATATTGGACTTCCAGCCTCCAGAACTGCA...GCTACTATGCTGGGAAAGGCCAGGTGGAAGCCATTGGGGTGAACTCTGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp CCCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGCAGTTCTGGAGGCTaGAAGTCCAATATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PKFTAFTPKSTEVSHPGGCSSGG*KSNIKV
Trigger: CACCTTGATATTGGACTTCCAGCCTCCAGAACTGCA...CCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp AGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGTCTGACCAGCACCGCTaGGGTTCTCAGGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: SSGGWKSNIKVLLIPVLVSDQHR*GSQGIY
Trigger: GTAGATGCCCTGAGAACCCCAGCGGTGCTGGTCAGA...CACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CACCGCTGGGGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTATCCCTGAGGGGAGACTaGGGAAAGAAGAATAATGTA +
Preference number: 4 (lower is better)
Translates to: HRWGSQGIYPFRCSPLSLSLRGD*GKKNNV
Trigger: TACATTATTCTTCTTTCCCCAGTCTCCCCTCAGGGA...TAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACCCCAGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp TCTCAGTTAGCTCCAATCTGCCATAAGGAAGCACTGCAGGCTGGGCATGTAAACGTCAGGGAACAAATGTaGGGGCTCTGCTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SQLAPICHKEALQAGHVNVREQM*GLCWLP
Trigger: TGGCAGCCAGCAGAGCCCCCACATTTGTTCCCTGAC...GTTTACATGCCCAGCCTGCAGTGCTTCCTTATGGCAGATTGGAGCTAACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
3UTR CAA 72 bp CGCTGTAGCCCACTGTCTCTAAACATATTTCACACGTaGCTGGGGGCAGTGTGTGTGACTCACTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RCSPLSLNIFHT*LGAVCVTHCFP
Trigger: TGGGAAGCAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGTGGGCTACAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp ACTGTCTCTAAACATATTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTGGACGCCACTTTGAGATaGCAAGTGAGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSKHISHVAGGSVCDSLDATLR*QVRPPG
Trigger: CCCAGGTGGCCTCACTTGTCATCTCAAAGTGGCGTC...CAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGGACGCCACTTTGAGATaGCAAGTGAGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLDATLR*QVRPPG
Trigger: CCCAGGTGGCCTCACTTGTCATCTCAAAGTGGCGTC...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp AAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTCAGCTTATTTCTTGCAGTTCTaGAGGCTGGAAGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: KPPTEVASQGSTTGGLSAYFLQF*RLEVQY
Trigger: ATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATA...AGCTGACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp ACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCTCGGAAGCACTGCAGGCTaGGCATGTAAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: THLPSLSHCLETPHIYHLGSTAG*ACKQQV
Trigger: CACCTGCTGTTTACATGCCCAGCCTGCAGTGCTTCC...GAGGTGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp TACACATTTGCCCGAACTCACAGCATGTACAACAAGAAGAGTGAACCCTCATGTTGGGGGCAGTGTGTGTaGCTCACTGCTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YTFARTHSMYNKKSEPSCWGQCV*LTASQS
Trigger: GCTCTGGGAAGCAGTGAGTCACACACACTGCCCCCA...ACATGAGGGTTCACTCTTCTTGTTGTACATGCTGTGAGTTCGGGCAAATGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp TCTCAGTTAGCTCCAATCTGCCATAAGGAAGCACTGCAGGCTGGGCATGTAAACTGTCTGCCCTGGCCCTaGTGCTGGTGTTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: SQLAPICHKEALQAGHVNCLPWP*CWCLRY
Trigger: ATATCTCAAACACCAGCATCAGGGCCAGGGCAGACA...GTTTACATGCCCAGCCTGCAGTGCTTCCTTATGGCAGATTGGAGCTAACTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CTGATGATCCCCCTTTCCACTAGCCACCCCAGCAAATGGCTGCAGGTCCCTGAGAACCCTCATGTAACCTaGTCAATGACTAGGTCAATA +
Preference number: 4 (lower is better)
Translates to: LMIPLSTSHPSKWLQVPENPHVT*SMTRSI
Trigger: TATTGACCTAGTCATTGATCAGGTTACATGAGGGTT...CTCAGGGACCTGCAGCCATTTGCTGGGGTGGCTAGTGGAAAGGGGGATCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACAGGTGCTTATTTCTTaGAGTTCTGGAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGEQVLIS*SSGGWK
Trigger: CTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp CTGATGATCCCCCTTTCCACTAGCCACCCCAGCAAATGGCTGCAGGTCCCTGAGCATGTAAACAGCAGGTaGTTATTTCTTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LMIPLSTSHPSKWLQVPEHVNSR*LFLAVL
Trigger: CAGAACTGCAAGAAATAAGCACCTGCTGTTTACATG...CTCAGGGACCTGCAGCCATTTGCTGGGGTGGCTAGTGGAAAGGGGGATCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp GCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCAATCAGTAGTCATATCTaGAACAGCAGTTGCAATTGG +
Preference number: 4 (lower is better)
Translates to: ASLKTVSELPTGTPLTSSISSHI*NSSCNW
Trigger: CCAATTGCAACTGCTGTTCCAGATATGACTACTGAT...TGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCATTGCCCAAATTCACTaGCTTCACTCCCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: APPISLLCLTALKHPTSIIAQIH*LHSQVH
Trigger: GTGGACTTGGGAGTGAAGGCAGTGAATTTGGGCAAT...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp CTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCAGGTTCATGAGCGGTaGCAGGTGGAACAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LISCSSGGWKSNIKVLLIQVHER*QVEQGH
Trigger: GTGCCCTTGTTCCACCTGCCACCGCTCATGAACCTG...AATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR TCA 90 bp AGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGGCTGCAGGTTGCTTTTaGCTGACAATTTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SSGGWKSNIKVLLIPVLVAAGCF*LTIFLG
Trigger: GCCTAGGAAAATTGTCAGTCAAAAGCAACCTGCAGC...CACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp AGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTGGTGCCTTCTTTGTCTCACTaGCTTGAAACACCCCACATC +
Preference number: 4 (lower is better)
Translates to: SSGGWKSNIKVLLIPVLVPSLSH*LETPHI
Trigger: GATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGG...CACCAAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp TACACATTTGCCCGAACTCACAGCATGTACAACAAGAAGAGTGAACCCTCATGTTGGGGGTCACCACCCTaGATCTTCCAAGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: YTFARTHSMYNKKSEPSCWGSPP*IFQVLD
Trigger: ATCGAGGACTTGGAAGATGCAGGGTGGTGACCCCCA...ACATGAGGGTTCACTCTTCTTGTTGTACATGCTGTGAGTTCGGGCAAATGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCAGGGAGGTCAAGGTTaGAGAGAGACAATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLQGGQG*RETILL
Trigger: GAGGAGAATTGTCTCTCTCCAACCTTGACCTCCCTG...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456145.2
CDS-3UTR GCA 90 bp ACTGTCTCTAAACATATTTCACACGTTGCTGGGGGCAGTGTGTGTGACTCACTGTGGCTTACAGATGGCTaGCTTCTCTCTGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVSKHISHVAGGSVCDSLWLTDG*LLSVSS
Trigger: TGAAGACACAGAGAGAAGGCAGCCATCTGTAAGCCA...CAGTGAGTCACACACACTGCCCCCAGCAACGTGTGAAATATGTTTAGAGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp TTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCCAGTCTTCAGGTGCTTATTTCTTaGAGTTCTGGAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQFWRLEVQYQGAADSSLQVLIS*SSGGWK
Trigger: CTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG...AAGACTGGAATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTGCCCAAATTCACTaGCTTCACTCCCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLIAQIH*LHSQVH
Trigger: GTGGACTTGGGAGTGAAGGCAGTGAATTTGGGCAAT...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CCA 90 bp ATAATTCTGTGTGACACTGTAATAGTGGAGATATGCCATTACACATTTGCCCGAATGAGCGGTGGCAGGTaGAACAAGGGCACCATGGGC +
Preference number: 4 (lower is better)
Translates to: IILCDTVIVEICHYTFARMSGGR*NKGTMG
Trigger: GCCCATGGTGCCCTTGTTCCACCTGCCACCGCTCAT...TCGGGCAAATGTGTAATGGCATATCTCCACTATTACAGTGTCACACAGAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp GGTTCTCAGGGCATCTACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTTTTGTCTCACTGCCTTaGAACACCCCACATCTATCA +
Preference number: 4 (lower is better)
Translates to: GSQGIYPFRCSPLSLNIFFVSLP*NTPHLS
Trigger: TGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAA...AAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTAGATGCCCTGAGAACC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp TACCCTTTCCGCTGTAGCCCACTGTCTCTAAACATATTTCACACGTTGCTGGGGATGCCATTACACATTTaGCCGAACTCACAGCATGTA +
Preference number: 4 (lower is better)
Translates to: YPFRCSPLSLNIFHTLLGMPLHI*PNSQHV
Trigger: TACATGCTGTGAGTTCGGGCAAATGTGTAATGGCAT...CCCCAGCAACGTGTGAAATATGTTTAGAGACAGTGGGCTACAGCGGAAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp TACACATTTGCCCGAACTCACAGCATGTACAACAAGAAGAGTGAACCCTCATGTCCTGATGCTGGTGTTTaGGATATCAGAACTCACCTC +
Preference number: 4 (lower is better)
Translates to: YTFARTHSMYNKKSEPSCPDAGV*DIRTHL
Trigger: GAGGTGAGTTCTGATATCTCAAACACCAGCATCAGG...ACATGAGGGTTCACTCTTCTTGTTGTACATGCTGTGAGTTCGGGCAAATGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR TCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGTTTGATTTGCCCCAGTaGTCAGTAGTCATATCTGGA +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLFDLPQ*SVVISG
Trigger: TCCAGATATGACTACTGATCACTGGGGCAAATCAAA...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR GCA 90 bp ATAATTCTGTGTGACACTGTAATAGTGGAGATATGCCATTACACATTTGCCCGACACTGGGCTGTGCCCTaGCTCCTTAAAGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: IILCDTVIVEICHYTFARHWAVP*LLKDCE
Trigger: CTCACAGTCTTTAAGGAGGCAGGGCACAGCCCAGTG...TCGGGCAAATGTGTAATGGCATATCTCCACTATTACAGTGTCACACAGAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CCA 90 bp TCTCAGTTAGCTCCAATCTGCCATAAGGAAGCACTGCAGGCTGGGCATGTAAACTATTTCTTGCAGTTCTaGAGGCTGGAAGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: SQLAPICHKEALQAGHVNYFLQF*RLEVQY
Trigger: ATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATA...GTTTACATGCCCAGCCTGCAGTGCTTCCTTATGGCAGATTGGAGCTAACTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR GCA 90 bp CAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCATGTAAACAGCAGGTaGTTATTTCTTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QVLISCSSGGWKSNIKVLHVNSR*LFLAVL
Trigger: CAGAACTGCAAGAAATAAGCACCTGCTGTTTACATG...CAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS CCA 90 bp ACCCGTACCAGGCTGTGCACCAATGGGGTAAGTGAGGTCCAGGCCTaGCTGCATCGGGAGGGGCCTCGGGTGCAAGGGTGGCTGGCACGA +
Preference number: 5 (lower is better)
Translates to: TRTRLCTNGVSEVQA*LHREGPRVQGWLAR
Trigger: TCGTGCCAGCCACCCTTGCACCCGAGGCCCCTCCCGATGCAGCCAGGCCTGGACCTCACTTACCCCATTGGTGCACAGCCTGGTACGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS GCA 90 bp CTGTCATCCGCCGAGCGTCCCTGGAGAAGAACCCGTACCAGGCTGTaGACCAATGGGGTAAGTGAGGTCCAGGCCTGGCTGCATCGGGAG +
Preference number: 5 (lower is better)
Translates to: LSSAERPWRRTRTRL*TNGVSEVQAWLHRE
Trigger: CTCCCGATGCAGCCAGGCCTGGACCTCACTTACCCCATTGGTGCACAGCCTGGTACGGGTTCTTCTCCAGGGACGCTCGGCGGATGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS CCA 90 bp AGGCAAGCCAGTGCAGAGCTGGGTGATCCACAGGTTCATGAGCGGTaGCAGGTGGAACAAGGGCACCATGGGCGGAGGGTTGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RQASAELGDPQVHER*QVEQGHHGRRVGQL
Trigger: CAGCTGCCCAACCCTCCGCCCATGGTGCCCTTGTTCCACCTGCCACCGCTCATGAACCTGTGGATCACCCAGCTCTGCACTGGCTTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381153.8
ENST00000456145.2
ENST00000470369.1
ENST00000495467.1
CDS TCA 90 bp GGGGGTTCCCGTCCACCTGTCAGGGGGTTCGACGCCACTTTGAGATaGCAAGTGAGGCCACCTGGGCACAGCGCTGATGAAGAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GGSRPPVRGFDATLR*QVRPPGHSADEEVS
Trigger: GGACACCTCTTCATCAGCGCTGTGCCCAGGTGGCCTCACTTGTCATCTCAAAGTGGCGTCGAACCCCCTGACAGGTGGACGGGAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456145.2
CDS TCA 90 bp ACACCTAGGCCCCCAGCTGAAGTGACACTGTGGGTGCCAGGCATCTaGGGTCTCCACAAGCCCCCACAGACTCAGGGTGGGAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: TPRPPAEVTLWVPGI*GLHKPPQTQGGNSW
Trigger: CCAGGAATTCCCACCCTGAGTCTGTGGGGGCTTGTGGAGACCTCAGATGCCTGGCACCCACAGTGTCACTTCAGCTGGGGGCCTAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS CCA 90 bp CCTCCTACTTCGGGGCCCACTTTGCTGTCATCCGCCGAGCGTCCCTaGAGAAGAACCCGTACCAGGCTGTGCACCAATGGGGTAAGTGAG +
Preference number: 5 (lower is better)
Translates to: PPTSGPTLLSSAERP*RRTRTRLCTNGVSE
Trigger: CTCACTTACCCCATTGGTGCACAGCCTGGTACGGGTTCTTCTCCAGGGACGCTCGGCGGATGACAGCAAAGTGGGCCCCGAAGTAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS-3UTR CAA 90 bp TGGGCTGTGCCCTGCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCAGCCACCCACTGAGGTaGCTTCTCAGGGGAGCACCA +
Preference number: 5 (lower is better)
Translates to: WAVPCLLKDCERAPNWDTSHPLR*LLRGAP
Trigger: TGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCT...GGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGCAGGGCACAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS CCA 90 bp AGCGCCGTCCTCAGTGGCCACACCAAGAACGAGGCCATGTCTTCCTaGGAAGGGCCTCAGATGTCAGCAAATGCCCTGGTGTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: SAVLSGHTKNEAMSS*EGPQMSANALVSWA
Trigger: AGCCCAAGACACCAGGGCATTTGCTGACATCTGAGGCCCTTCCCAGGAAGACATGGCCTCGTTCTTGGTGTGGCCACTGAGGACGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS TCA 90 bp AGCCGCCTGTTAGCACTCCTGGGAGGGCCCGGAGTGGTCCCTGAATaGTGGATTCACCTGGAACATTTTCACCCTCTTCAGGCCCACCCT +
Preference number: 5 (lower is better)
Translates to: SRLLALLGGPGVVPE*WIHLEHFHPLQAHP
Trigger: AGGGTGGGCCTGAAGAGGGTGAAAATGTTCCAGGTGAATCCATCATTCAGGGACCACTCCGGGCCCTCCCAGGAGTGCTAACAGGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS TCA 90 bp GCAGAGCCGCCTGTTAGCACTCCTGGGAGGGCCCGGAGTGGTCCCTaGATGATGGATTCACCTGGAACATTTTCACCCTCTTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: AEPPVSTPGRARSGP*MMDSPGTFSPSSGP
Trigger: TGGGCCTGAAGAGGGTGAAAATGTTCCAGGTGAATCCATCATTCAGGGACCACTCCGGGCCCTCCCAGGAGTGCTAACAGGCGGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS-3UTR CAA 90 bp AAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTCAGCTCCAGGGAGGTCAAGGTaGGAGAGAGACAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: KPPTEVASQGSTTGGLSAPGRSR*ERDNSP
Trigger: AGGAGAATTGTCTCTCTCCAACCTTGACCTCCCTGG...AGCTGACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456145.2
CDS-3UTR CAA 90 bp TATCAAGGTGCTGCTGATTCCAGTCTTGGTGAGGGCTCTCTTCCTGGCTTACAGCTGCAGGTGGCATCATaGAGCCAGGGGCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: YQGAADSSLGEGSLPGLQLQVAS*SQGPPG
Trigger: ACCAGGAGGCCCCTGGCTCAATGATGCCACCTGCAG...CTGTAAGCCAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAGCACCTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp AAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTCAGCTAACATATTTCACACGTaGCTGGGGGCAGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: KPPTEVASQGSTTGGLSANIFHT*LGAVCV
Trigger: CACACACACTGCCCCCAGCAACGTGTGAAATATGTT...AGCTGACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp ACCCCAAGCCACCCACTGAGGTTGCTTCTCAGGGGAGCACCACTGGTGGGCTGTGGCTGCAGGTTGCTTTaGACTGACAATTTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: TPSHPLRLLLRGAPLVGCGCRLL*TDNFPR
Trigger: CCTAGGAAAATTGTCAGTCAAAAGCAACCTGCAGCC...ACAGCCCACCAGTGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CAA 90 bp GCCTCCTTAAAGACTGTGAGCGAGCTCCCAACTGGGACACCCCTGACCAGCTCAGCAGGTGCTTATTTCTaGCAGTTCTGGAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: ASLKTVSELPTGTPLTSSAGAYF*QFWRLE
Trigger: TTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGC...TGAGCTGGTCAGGGGTGTCCCAGTTGGGAGCTCGCTCACAGTCTTTAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CAA 90 bp TATCAAGGTGCTGCTGATTCCAGTCTTGGTGAGGGCTCTCTTCCTGGCTTACAGAGCCACCCACTGAGGTaGCTTCTCAGGGGAGCACCA +
Preference number: 5 (lower is better)
Translates to: YQGAADSSLGEGSLPGLQSHPLR*LLRGAP
Trigger: TGGTGCTCCCCTGAGAAGCAACCTCAGTGGGTGGCT...CTGTAAGCCAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAGCACCTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGAAGGGAGGCCACCCATaGCTCCAGCTCCCGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLKGGHP*LQLPWH
Trigger: GTGCCACGGGAGCTGGAGCAATGGGTGGCCTCCCTT...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CAA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCCTGCTGATTCCAGTCTaGGTGAGGGCTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: APPISLLCLTALKHPTSILLIPV*VRALFL
Trigger: CAGGAAGAGAGCCCTCACCAAGACTGGAATCAGCAG...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp CCCAAATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGCTTTGTCTCACTGCCTaGAAACACCCCACATCTATC +
Preference number: 5 (lower is better)
Translates to: PKFTAFTPKSTEVSHPGGLCLTA*KHPTSI
Trigger: GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAG...CCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp AATTCACTGCCTTCACTCCCAAGTCCACAGAGGTGTCTCATCCAGGCGGGTGAACAGCTCACTCTTATTTaGTCTGCCCTGGCCCTGATG +
Preference number: 5 (lower is better)
Translates to: NSLPSLPSPQRCLIQAGEQLTLI*SALALM
Trigger: CATCAGGGCCAGGGCAGACAAAATAAGAGTGAGCTG...TTCACCCGCCTGGATGAGACACCTCTGTGGACTTGGGAGTGAAGGCAGTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CAA 90 bp CTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGATTCTGCAGGTGGCATCATaGAGCCAGGGGCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LISCSSGGWKSNIKVLLILQVAS*SQGPPG
Trigger: ACCAGGAGGCCCCTGGCTCAATGATGCCACCTGCAG...AATCAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp GTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCTGGCACGGCCTCCAGCATaGCCCAAATTCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VLISCSSGGWKSNIKVLLARPPA*PKFTAF
Trigger: GAAGGCAGTGAATTTGGGCAATGCTGGAGGCCGTGC...CAGCAGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp GCAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTGCACGGCCTCCAGCATaGCCCAAATTCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: AGAYFLQFWRLEVQYQGAARPPA*PKFTAF
Trigger: GAAGGCAGTGAATTTGGGCAATGCTGGAGGCCGTGC...AGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp CATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCTCTGCAACATATTTCACACGTaGCTGGGGGCAGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: HLPSLSHCLETPHIYHLCNIFHT*LGAVCV
Trigger: CACACACACTGCCCCCAGCAACGTGTGAAATATGTT...GCAGAGGTGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp GCACCACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCCATCTCCCTTCTTaGTCTCACTGCCTTGAAACA +
Preference number: 5 (lower is better)
Translates to: APPISLLCLTALKHPTSITHLPS*SHCLET
Trigger: TGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT...GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp ACCCATCTCCCTTCTTTGTCTCACTGCCTTGAAACACCCCACATCTATCACCTCACCCATCTCCCTTCTTaGTCTCACTGCCTTGAAACA +
Preference number: 5 (lower is better)
Translates to: THLPSLSHCLETPHIYHLTHLPS*SHCLET
Trigger: TGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT...GAGGTGATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAGAAGGGAGATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS-3UTR CAA 90 bp TCTCAGTTAGCTCCAATCTGCCATAAGGAAGCACTGCAGGCTGGGCATGTAAACCTCCAGGGCTGCAGGTaGCTTTTGACTGACAATTTT +
Preference number: 5 (lower is better)
Translates to: SQLAPICHKEALQAGHVNLQGCR*LLTDNF
Trigger: AAAATTGTCAGTCAAAAGCAACCTGCAGCCCTGGAG...GTTTACATGCCCAGCCTGCAGTGCTTCCTTATGGCAGATTGGAGCTAACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS-3UTR CAA 90 bp GCAGGTGCTTATTTCTTGCAGTTCTGGAGGCTGGAAGTCCAATATCAAGGTGCTCTTTGTCTCACTGCCTaGAAACACCCCACATCTATC +
Preference number: 5 (lower is better)
Translates to: AGAYFLQFWRLEVQYQGALCLTA*KHPTSI
Trigger: GATAGATGTGGGGTGTTTCAAGGCAGTGAGACAAAG...AGCACCTTGATATTGGACTTCCAGCCTCCAGAACTGCAAGAAATAAGCACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381153.8
ENST00000456145.2
CDS CCA 72 bp GCGGGCGGCAGCTGGGCCCTCTTCCCACAGCCACGCTaGGGTTGCCATGCCTGCAGGTCTTGGGGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: AGGSWALFPQPR*GCHACRSWGPL
Trigger: GAGGGGGCCCCAAGACCTGCAGGCATGGCAACCCCAGCGTGGCTGTGGGAAGAGGGCCCAGCTGCCGCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS GCA 72 bp AGGTCCAGGCCTGGCTGCATCGGGAGGGGCCTCGGGTaGAAGGGTGGCTGGCACGAGCCCAGCTGGACGCCT +
Preference number: 6 (lower is better)
Translates to: RSRPGCIGRGLG*KGGWHEPSWTP
Trigger: AGGCGTCCAGCTGGGCTCGTGCCAGCCACCCTTGCACCCGAGGCCCCTCCCGATGCAGCCAGGCCTGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS GCA 72 bp CCCACGGAAACCCTGCCTGTACTGGGGCCGCAGCGCTaGCCCCACCCATACGTAATTACACGGCTCGGTGTA +
Preference number: 6 (lower is better)
Translates to: PTETLPVLGPQR*PHPYVITRLGV
Trigger: TACACCGAGCCGTGTAATTACGTATGGGTGGGGGCAGCGCTGCGGCCCCAGTACAGGCAGGGTTTCCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS GCA 72 bp GCCGAGCGTCCCTGGAGAAGAACCCGTACCAGGCTGTaGACCAATGGGGTAAGTGAGGTCCAGGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: AERPWRRTRTRL*TNGVSEVQAWL
Trigger: CAGCCAGGCCTGGACCTCACTTACCCCATTGGTGCACAGCCTGGTACGGGTTCTTCTCCAGGGACGCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS CCA 72 bp TCGGGGCCCACTTTGCTGTCATCCGCCGAGCGTCCCTaGAGAAGAACCCGTACCAGGCTGTGCACCAATGGG +
Preference number: 6 (lower is better)
Translates to: SGPTLLSSAERP*RRTRTRLCTNG
Trigger: CCCATTGGTGCACAGCCTGGTACGGGTTCTTCTCCAGGGACGCTCGGCGGATGACAGCAAAGTGGGCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS TCA 72 bp CGTCCACCTGTCAGGGGGTTCGACGCCACTTTGAGATaGCAAGTGAGGCCACCTGGGCACAGCGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RPPVRGFDATLR*QVRPPGHSAPP
Trigger: AGGAGGAGCGCTGTGCCCAGGTGGCCTCACTTGTCATCTCAAAGTGGCGTCGAACCCCCTGACAGGTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381153.8
CDS CAA 72 bp TCATTGAGCCAGGGGCCTCCTACTTCGGGGCCCACTTaGCTGTCATCCGCCGAGCGTCCCTGGAGAAGAACC +
Preference number: 6 (lower is better)
Translates to: SLSQGPPTSGPT*LSSAERPWRRT
Trigger: GGTTCTTCTCCAGGGACGCTCGGCGGATGACAGCAAAGTGGGCCCCGAAGTAGGAGGCCCCTGGCTCAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495467.1
CDS CCA 72 bp AGTGCAGAGCTGGGTGATCCACAGGTTCATGAGCGGTaGCAGGTGGAACAAGGGCACCATGGGCGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: SAELGDPQVHER*QVEQGHHGRRV
Trigger: AACCCTCCGCCCATGGTGCCCTTGTTCCACCTGCCACCGCTCATGAACCTGTGGATCACCCAGCTCTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381153.8
ENST00000456145.2
ENST00000470369.1
ENST00000495467.1
CDS TCA 72 bp CGTCCACCTGTCAGGGGGTTCGACGCCACTTTGAGATaGCAAGTGAGGCCACCTGGGCACAGCGCTGATGAA +
Preference number: 6 (lower is better)
Translates to: RPPVRGFDATLR*QVRPPGHSADE
Trigger: TTCATCAGCGCTGTGCCCAGGTGGCCTCACTTGTCATCTCAAAGTGGCGTCGAACCCCCTGACAGGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456145.2
CDS CCA 72 bp GAGGGCCCGGAGTGGTCCCTGAATGATGGATTCACCTaGAACATTTTCACCCTCTTCAGGCCCACCCTGCCC +
Preference number: 6 (lower is better)
Translates to: EGPEWSLNDGFT*NIFTLFRPTLP
Trigger: GGGCAGGGTGGGCCTGAAGAGGGTGAAAATGTTCCAGGTGAATCCATCATTCAGGGACCACTCCGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS TCA 72 bp TTAGCACTCCTGGGAGGGCCCGGAGTGGTCCCTGAATaGTGGATTCACCTGGAACATTTTCACCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LALLGGPGVVPE*WIHLEHFHPLQ
Trigger: CTGAAGAGGGTGAAAATGTTCCAGGTGAATCCATCATTCAGGGACCACTCCGGGCCCTCCCAGGAGTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470369.1
CDS GCA 72 bp CCCCCACCCATACGTAATTACACGGCTCGGTGTAATTaGAAATTCGAGGTTTACAAAGCCTCCCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: PPPIRNYTARCN*KFEVYKASPWR
Trigger: CCTCCAGGGGGAGGCTTTGTAAACCTCGAATTTGCAATTACACCGAGCCGTGTAATTACGTATGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470369.1