RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C11ORF16 (Homo sapiens)

Ensembl gene IDs: ENSG00000176029

Ensembl transcript IDs: ENST00000326053.10, ENST00000525780.5, ENST00000526227.3, ENST00000527607.1, ENST00000528830.3, ENST00000528998.5

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTaGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCG +
Preference number: 1 (lower is better)
Translates to: LLLICREVFVGWRYW*LFDCYLWPVLCLLP
Trigger: CGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR GCA 90 bp CAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGACACATTTaGCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTA +
Preference number: 1 (lower is better)
Translates to: QLGFMGRWQSGCGHI*PKQADPLFHGRGIL
Trigger: TAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 90 bp GTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTaGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCC +
Preference number: 1 (lower is better)
Translates to: VFVGWRYWWLFDCYL*PVLCLLPLKKALSA
Trigger: GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 90 bp ACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTaGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTC +
Preference number: 1 (lower is better)
Translates to: TGAFLLLICREVFVG*RYWWLFDCYLWPVL
Trigger: GAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 90 bp TTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTaGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTT +
Preference number: 1 (lower is better)
Translates to: FLLLICREVFVGWRY*WLFDCYLWPVLCLL
Trigger: AAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR TCA 90 bp TATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTaGCTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAA +
Preference number: 1 (lower is better)
Translates to: YLQGGLRGVEILVVI*LLPVACPLPPSVEE
Trigger: TTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR GCA 90 bp CACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTaGAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGAC +
Preference number: 1 (lower is better)
Translates to: HIPIALTTGAFLLLI*REVFVGWRYWWLFD
Trigger: GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 90 bp GTGAAACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTaGCAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCC +
Preference number: 1 (lower is better)
Translates to: VKQNVTHVQLGFMGR*QSGCGHICPKQADP
Trigger: GGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR TCA 90 bp GGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTaGAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATAT +
Preference number: 1 (lower is better)
Translates to: GYLTVTCGLSSASFR*RRPCQPLCITLLEY
Trigger: ATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR CCA 90 bp CAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAGCAGGGAGGTCTTCGTaGGGTGGAGATACTGGTGGT +
Preference number: 2 (lower is better)
Translates to: QSGCGHICPKQADPLFHGAGRSS*GGDTGG
Trigger: ACCACCAGTATCTCCACCCCACGAAGACCTCCCTGC...TCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR GCA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTAGCCCTCACAACAGGTaGCTTCCTGCTGCTTATCTG +
Preference number: 2 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASSPHNR*LPAAYL
Trigger: CAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCT...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR TCA 90 bp CTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTATACTGGTGGTTATTTaGCTGTTACCTGTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: LAGSPRAGSHIPIALTTGILVVI*LLPVAC
Trigger: ACAGGCCACAGGTAACAGTCAAATAACCACCAGTAT...ACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR TCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAATACTGGTGGTTATTTaGCTGTTACCTGTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTEILVVI*LLPVAC
Trigger: ACAGGCCACAGGTAACAGTCAAATAACCACCAGTAT...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR TCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGATCTGCCTCCTTCCGTTaGAGAAGGCCTTGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGSASFR*RRPCQP
Trigger: TGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGA...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CAA 90 bp TGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTaGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATA +
Preference number: 2 (lower is better)
Translates to: WLFDCYLWPVLCLLP*KKALSATLYNSPRI
Trigger: TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CAA 90 bp TGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTaGTCAGCCACTCTGTATAACTCTCCTCGAATATTTACCATGTTT +
Preference number: 2 (lower is better)
Translates to: CYLWPVLCLLPLKKA*SATLYNSPRIFTMF
Trigger: AAACATGGTAAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326053.10
3UTR-3UTR CCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGAGAGGTCTTCGTGGGGTaGAGATACTGGTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGEVFVG*RYWWLF
Trigger: AAATAACCACCAGTATCTCCACCCCACGAAGACCTC...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR CAA 90 bp GGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTACTCTGCCTCCTTCCGTaGAAGAAGGCCTTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: GHICPKQADPLFHGRGILLCLLP*KKALSA
Trigger: GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG...TAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR GCA 72 bp ATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTaGAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGG +
Preference number: 3 (lower is better)
Translates to: IALTTGAFLLLI*REVFVGWRYWW
Trigger: CCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR CAA 90 bp TATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTCTCTGCCTCCTTCCGTaGAAGAAGGCCTTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: YSPHNRCLPAAYLQGGLRLCLLP*KKALSA
Trigger: GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG...ACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR TCA 72 bp GGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTaGCTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: GGLRGVEILVVI*LLPVACPLPPS
Trigger: GGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR TCA 72 bp GCAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTaGCCCCCTCTTCCACGGAAGAGGCATCTTAAAGCA +
Preference number: 3 (lower is better)
Translates to: AEWLWTHLPKAG*PPLPRKRHLKA
Trigger: TGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR GCA 72 bp GGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTaGCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGT +
Preference number: 3 (lower is better)
Translates to: GRIPHSYSPHNR*LPAAYLQGGLR
Trigger: ACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR GCA 72 bp TTTATGGGAAGGTGGCAGAGTGGCTGTGGACACATTTaGCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGA +
Preference number: 3 (lower is better)
Translates to: FMGRWQSGCGHI*PKQADPLFHGR
Trigger: TCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTGCCACCTTCCCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 72 bp GGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTaGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCC +
Preference number: 3 (lower is better)
Translates to: GWRYWWLFDCYL*PVLCLLPLKKA
Trigger: GGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 72 bp ATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTaGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: ICREVFVGWRYW*LFDCYLWPVLC
Trigger: GCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 72 bp CTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTaGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LICREVFVGWRY*WLFDCYLWPVL
Trigger: GAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR CAA 90 bp TCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCCCGTTGAAGAAGGCCTaGTCAGCCACTCTGTATAAC +
Preference number: 3 (lower is better)
Translates to: SSWGGDTGGYLTVTCGLSPLKKA*SATLYN
Trigger: GTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGG...GGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 72 bp TTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTaGAGATACTGGTGGTTATTTGACTGTTACCTGTGG +
Preference number: 3 (lower is better)
Translates to: FLLLICREVFVG*RYWWLFDCYLW
Trigger: CCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CCA 72 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTaGCAGAGTGGCTGTGGACACATTTGCCCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: NVTHVQLGFMGR*QSGCGHICPKQ
Trigger: CTGCTTTGGGCAAATGTGTCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR CAA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGCCGTTGAAGAAGGCCTaGTCAGCCACTCTGTATAAC +
Preference number: 3 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLPLKKA*SATLYN
Trigger: GTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGG...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR-3UTR CAA 90 bp GAAACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGGATACTGGTGGTTATTaGACTGTTACCTGTGGCCTG +
Preference number: 3 (lower is better)
Translates to: ETKCHSCTTRLYGKVAEWDTGGY*TVTCGL
Trigger: CAGGCCACAGGTAACAGTCAAATAACCACCAGTATC...CCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAGGGGCTTGTGCCCGGTaGGCCAGGGTGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSGCGHICPKQADPLFHGGACAR*ARVLGG
Trigger: CCCTCCAAGCACCCTGGCTCACCGGGCACAAGCCCC...TCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp GGCCCTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGCTGGCAGCAGGCATaGTGGTGGCAGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GPGREPQGRIPHSYSPHNSWQQA*WWQRGH
Trigger: GTGCCCTCTCTGCCACCATCATGCCTGCTGCCAGCT...GTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGTGTTCAGCTTCCCCTaGCGGGGTCCGCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LAGSPRAGSHIPIALTTGVFSFP*RGPRWL
Trigger: AAGCCACCGCGGACCCCGCCAGGGGAAGCTGAACAC...ACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR TCA 90 bp CGCTCCTGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGATGGTTGGGGGCTTGTGCCCGGTaGGCCAGGGTGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RSCVQDQPGMCPRPTGWLGACAR*ARVLGG
Trigger: CCCTCCAAGCACCCTGGCTCACCGGGCACAAGCCCC...CAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACAGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp GCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCGGAGAGGTCCCAAGGTaGAGCAGCACCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGSSLDLFSMQSPPSSTPGEVPR*SSTVPA
Trigger: GGCTGGGACGGTGCTGCTCCACCTTGGGACCTCTCC...GGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACGCAGGGAGGTCTTCGTaGGGTGGAGATACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPGREPQGRIPHSYSPHNAGRSS*GGDTGG
Trigger: ACCACCAGTATCTCCACCCCACGAAGACCTCCCTGC...GTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTTTGCCCAAAGCAGGCTaGCCCCCTCTTCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: LAGSPRAGSHIPIALTTGLPKAG*PPLPRK
Trigger: CTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAA...ACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CGCTCCTGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGATGGTTGGCCAGGCCCCTGCCATaGTGGGTCGGCAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: RSCVQDQPGMCPRPTGWLARPLP*WVGNVE
Trigger: CTCCACGTTGCCGACCCAGCATGGCAGGGGCCTGGC...CAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR GCA 90 bp CAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAGTGCCAGGGCCATACTaGTGTTGGCCTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QSGCGHICPKQADPLFHGVPGPY*CWPGSQ
Trigger: CTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCAC...TCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTGAGGCCACCAAGTCGTaGCACATGGCGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASEATKS*HMAGSH
Trigger: GTGGCTGCCCGCCATGTGGCACGACTTGGTGGCCTC...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTGGAGAGGTCCCAAGGTaGAGCAGCACCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASGEVPR*SSTVPA
Trigger: GGCTGGGACGGTGCTGCTCCACCTTGGGACCTCTCC...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGGGGCTTGTGCCCGGTaGGCCAGGGTGCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLLICREVFVGWRYWWLFGACAR*ARVLGG
Trigger: CCCTCCAAGCACCCTGGCTCACCGGGCACAAGCCCC...AAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGTTTCACGCCAGGCCCCTGCCATaGTGGGTCGGCAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: PKQADPLFHGRGILKQFHARPLP*WVGNVE
Trigger: CTCCACGTTGCCGACCCAGCATGGCAGGGGCCTGGC...GTGAAACTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAAGCCAGCCAGGCCCCTaGCATGCTGGGTCGGCAACG +
Preference number: 4 (lower is better)
Translates to: VLPGPFLNAISSFQHPQESQPGP*HAGSAT
Trigger: CGTTGCCGACCCAGCATGGCAGGGGCCTGGCTGGCT...TTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp GGCCCTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACCTAGGACCCATGTGTTaGCAGCATCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPGREPQGRIPHSYSPHNLGPMC*QHLQLF
Trigger: GAAGAGCTGGAGATGCTGCCAACACATGGGTCCTAG...GTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAACCACAGAGGCAGCCCTaGCACAGTAGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTEPQRQP*HSSWQQ
Trigger: CTGCTGCCAGCTACTGTGCCAGGGCTGCCTCTGTGG...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCCTGTGTCCAACCCGGTGAGCCAGGGTaGTTGGAGGGCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SMQSPPSSTPKKRRSCVQPGEPG*LEGKGV
Trigger: TACCCCTTTGCCCTCCAAGCACCCTGGCTCACCGGG...TTGGACACAGGAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR GCA 90 bp GATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTGCCAGGCCCCTGCCATaGTGGGTCGGCAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: DTGGYLTVTCGLSSASFRARPLP*WVGNVE
Trigger: CTCCACGTTGCCGACCCAGCATGGCAGGGGCCTGGC...ACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp ATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGAGCCAGCCAGGCCCCTaGCATGCTGGGTCGGCAACG +
Preference number: 4 (lower is better)
Translates to: IPHSYSPHNRCLPAAYLQSQPGP*HAGSAT
Trigger: CGTTGCCGACCCAGCATGGCAGGGGCCTGGCTGGCT...CTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCTTCCTGCTGCTTATCTaGAGGGAGGTCTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GCGHICPKQADPLFHGRGFLLLI*REVFVG
Trigger: CCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAA...GCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCAGGCCCCTGCCATGCTaGGTCGGCAACGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LDLFSMQSPPSSTPKKRRRPLPC*VGNVET
Trigger: TGTCTCCACGTTGCCGACCCAGCATGGCAGGGGCCT...GCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp GAAGCGTCGCTCCTGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGCACTGCCCTCGGGAGTaGCCTTTATTTGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: EASLLCPRPTRDVSKTNRHCPRE*PLFGPG
Trigger: ACCGGGCCCAAATAAAGGCCACTCCCGAGGGCAGTG...CCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACAGGAGCGACGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR TCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAATGGGGTGCTCCCTGGTaGAAGACTTGTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTEWGAPW*KTCAAS
Trigger: AGAGGCTGCACAAGTCTTTCACCAGGGAGCACCCCA...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp TTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGAGCTGGCAGCAGGCATaGTGGTGGCAGAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FDCYLWPVLCLLPLKKALSWQQA*WWQRGH
Trigger: GTGCCCTCTCTGCCACCATCATGCCTGCTGCCAGCT...CAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGGGCAAGAAGAGGCATaGCTTGCAAGGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTEGQEEA*LARGLC
Trigger: GCACAAGCCCCTTGCAAGGCATGCCTCTTCTTGCCC...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCCTGGTGAAAGACTTGTaGAGCCTCTCCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GCGHICPKQADPLFHGRGLVKDL*SLSTAF
Trigger: GAAGGCTGTGGAGAGGCTGCACAAGTCTTTCACCAG...GCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGGAGGCCACCAAGTCGTaGCACATGGCGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WWLFDCYLWPVLCLLPLKEATKS*HMAGSH
Trigger: GTGGCTGCCCGCCATGTGGCACGACTTGGTGGCCTC...CTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGACTGTGGCCTGTCCTCTaGCTCCTTCCGTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QSGCGHICPKQADPLFHGLWPVL*LLPLKK
Trigger: CTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAG...TCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCAGCTGCCCTCAGCACTaGCCTCGGGAGTGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: GPFLNAISSFQHPQEASLSCPQH*PREWPL
Trigger: TAAAGGCCACTCCCGAGGGCAGTGCTGAGGGCAGCT...GAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp TATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTAGGCCCCTGCCATGCTaGGTCGGCAACGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: YSPHNRCLPAAYLQGGLRRPLPC*VGNVET
Trigger: TGTCTCCACGTTGCCGACCCAGCATGGCAGGGGCCT...ACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp ATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCGTCAGGGACACCGACTaGACCCCACCTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: IPIALTTGAFLLLICREVVRDTD*TPPRGT
Trigger: AGTGCCCCTAGGTGGGGTCCAGTCGGTGTCCCTGAC...GACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGTTTCACCCACAGAGGCAGCCCTaGCACAGTAGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PKQADPLFHGRGILKQFHPQRQP*HSSWQQ
Trigger: CTGCTGCCAGCTACTGTGCCAGGGCTGCCTCTGTGG...GTGAAACTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAATACCTCCACTCAGGCTaGCAGAGGCCACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTEYLHSG*QRPLCL
Trigger: GAGACAGAGTGGCCTCTGCCAGCCTGAGTGGAGGTA...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAACGCGGTGGCTTCATGTaGGTTGCTTTCGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTERGGFM*VAFETS
Trigger: GCTGGTCTCGAAAGCAACCCACATGAAGCCACCGCG...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CCA 90 bp GCCCTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACATTTGACTGTTACCTGTaGCCTGTCCTCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALAGSPRAGSHIPIALTTFDCYL*PVLCLL
Trigger: AAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAA...TGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAAGCGTCGCTCCTGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGCCCTGTCTCTCCAGCTaGGTCCTCCCTGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: EASLLCPRPTRDVSKTNRPCLSS*VLPGPF
Trigger: AAAAGGTCCAGGGAGGACCCAGCTGGAGAGACAGGG...CCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACAGGAGCGACGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR TCA 90 bp TGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATCCACGCTGCAGTATTTaGGCAAAGGCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WPVLCLLPLKKALSATLYPRCSI*AKASWA
Trigger: GGCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGG...ATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTCTCCAGCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCCACGCTGCAGTATTTaGGCAAAGGCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSWVLPGPFLNAISSFQPRCSI*AKASWA
Trigger: GGCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGG...CTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGCTGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR GCA 90 bp AGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGCCCGGTGAGCCAGGGTaGTTGGAGGGCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: RYWWLFDCYLWPVLCLLPPGEPG*LEGKGV
Trigger: TACCCCTTTGCCCTCCAAGCACCCTGGCTCACCGGG...CGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCGTGCCAGGGCCATACTaGTGTTGGCCTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LFDCYLWPVLCLLPLKKAVPGPY*CWPGSQ
Trigger: CTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCAC...GGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGGCTGTGGACACATTTaGCCAAAGCAGGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: PIALTTGAFLLLICREVFGCGHI*PKQADP
Trigger: GGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCC...GAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAACCGTGGAGGATTCCATaGCCTTCAGAGGATCCACCC +
Preference number: 4 (lower is better)
Translates to: WVLPGPFLNAISSFQHPQPWRIP*PSEDPP
Trigger: GGGTGGATCCTCTGAAGGCCATGGAATCCTCCACGG...TTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp TCTCCAGCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCGCTGGGTCGGCAACGTaGAGACATGGGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPAGSSLDLFSMQSPPSSAGSAT*RHGQEE
Trigger: CTCTTCTTGCCCATGTCTCCACGTTGCCGACCCAGC...GCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp TACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAGGCCCCTGCCATGCTaGGTCGGCAACGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: YWWLFDCYLWPVLCLLPLRPLPC*VGNVET
Trigger: TGTCTCCACGTTGCCGACCCAGCATGGCAGGGGCCT...CAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGGGGCCATACTGCTGTTaGCCTGGCTCCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: WWLFDCYLWPVLCLLPLKGPYCC*PGSQSA
Trigger: GGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCC...CTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGGGGCCATACTGCTGTTaGCCTGGCTCCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RYWWLFDCYLWPVLCLLPGPYCC*PGSQSA
Trigger: GGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCC...CGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTGTCAGGGACACCGACTaGACCCCACCTAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VLCLLPLKKALSATLYNSVRDTD*TPPRGT
Trigger: AGTGCCCCTAGGTGGGGTCCAGTCGGTGTCCCTGAC...AGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTCCAAGTCGTGCCACATaGCGGGCAGCCACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EVFVGWRYWWLFDCYLWPPSRAT*RAATEA
Trigger: TGCCTCTGTGGCTGCCCGCCATGTGGCACGACTTGG...AGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACGGGCAAAGGGGTAGGTaGAGGAGAGGTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LLICREVFVGWRYWWLFDGQRGR*RRGPKV
Trigger: CACCTTGGGACCTCTCCTTCACCTACCCCTTTGCCC...GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp TGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGGGGCAAAGGGGTAGGTaGAGGAGAGGTCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: WWLFDCYLWPVLCLLPLKGQRGR*RRGPKV
Trigger: CACCTTGGGACCTCTCCTTCACCTACCCCTTTGCCC...CTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp GGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCATGGTGAGAGAGGAATaGCATCCTCTTCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: GREPQGRIPHSYSPHNRCMVREE*HPLLRP
Trigger: TGGTCTTAGAAGAGGATGTCATTCCTCTCTCACCAT...GCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCTCTGCCTCCTTCCGTTaGAGAAGGCCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PIALTTGAFLLLICREVFSASFR*RRPCQP
Trigger: TGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGA...GAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTTTGCCCAAAGCAGGCTaGCCCCCTCTTCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: LCLLPLKKALSATLYNSPLPKAG*PPLPRK
Trigger: CTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAA...AGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCTTGCAAGGGGCTTGTaGCCGGTGAGCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WRYWWLFDCYLWPVLCLLLARGL*PVSQGA
Trigger: AGCACCCTGGCTCACCGGGCACAAGCCCCTTGCAAG...AAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGAGAAGAGGCATGCCTTaGAAGGGGCTTGTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SHIPIALTTGAFLLLICRRRGMP*KGLVPG
Trigger: ACCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCT...CCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGTCTCTCCAGCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCAGAAGAGGCATGCCTTaGAAGGGGCTTGTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: CLSSWVLPGPFLNAISSFRRGMP*KGLVPG
Trigger: ACCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCT...GAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGCTGGAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR GCA 90 bp TCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGGGGCAAGAAGAGGCATaGCTTGCAAGGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SSLDLFSMQSPPSSTPKKGQEEA*LARGLC
Trigger: GCACAAGCCCCTTGCAAGGCATGCCTCTTCTTGCCC...CTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR GCA 90 bp AGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTCAACAGGTGCCTTCCTaGTGCTTATCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RAGSHIPIALTTGAFLLLQQVPS*CLSAGR
Trigger: CCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTG...AAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCCGTGGAGGATTCCATaGCCTTCAGAGGATCCACCC +
Preference number: 4 (lower is better)
Translates to: VGWRYWWLFDCYLWPVLCPWRIP*PSEDPP
Trigger: GGGTGGATCCTCTGAAGGCCATGGAATCCTCCACGG...GCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGCATCCTGGGCCCCGTaGAGGATTCCATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: EVFVGWRYWWLFDCYLWPASWAP*RIPWPS
Trigger: TGAAGGCCATGGAATCCTCCACGGGGCCCAGGATGC...AGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGAGGAGAGGTCCCAAGGTaGAGCAGCACCGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGGEVPR*SSTVPA
Trigger: GGCTGGGACGGTGCTGCTCCACCTTGGGACCTCTCC...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCATACTGCTGTTGGCCTaGCTCCCAGAGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGSHIPIALTTGAFLLLIILLLA*LPECQH
Trigger: GTGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTAT...GATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCATACTGCTGTTGGCCTaGCTCCCAGAGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VGWRYWWLFDCYLWPVLCILLLA*LPECQH
Trigger: GTGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTAT...GCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCGAGAGGGCACAGGAATaGAGCATCCGGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VGWRYWWLFDCYLWPVLCERAQE*SIRRKL
Trigger: GAGCTTCCTCCGGATGCTCCATTCCTGTGCCCTCTC...GCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp ATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCGCAGGGAGGTCTTCGTaGGGTGGAGATACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: IPIALTTGAFLLLICREVAGRSS*GGDTGG
Trigger: ACCACCAGTATCTCCACCCCACGAAGACCTCCCTGC...GACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CAA 72 bp GGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTaGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRSSWGGDTGGY*TVTCGLSSASF
Trigger: GAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAGTATCCTACAGATGGTaGGAGAGGAATGACATCCTC +
Preference number: 4 (lower is better)
Translates to: QSGCGHICPKQADPLFHGVSYRW*ERNDIL
Trigger: GAGGATGTCATTCCTCTCTCACCATCTGTAGGATAC...TCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CAGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGATGGGATCTGTGTTaGCTGCACTGTTCACCATCA +
Preference number: 4 (lower is better)
Translates to: QSGCGHICPKQADPLFHGRWDLC*LHCSPS
Trigger: TGATGGTGAACAGTGCAGTCAACACAGATCCCATCT...TCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGACCCGGTGAGCCAGGGTaGTTGGAGGGCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGPGEPG*LEGKGV
Trigger: TACCCCTTTGCCCTCCAAGCACCCTGGCTCACCGGG...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGACTTGCAAGGGGCTTGTaGCCGGTGAGCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGLARGL*PVSQGA
Trigger: AGCACCCTGGCTCACCGGGCACAAGCCCCTTGCAAG...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAAGAAGAGGCATGCCTTaGAAGGGGCTTGTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: CLLPLKKALSATLYNSPRRRGMP*KGLVPG
Trigger: ACCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCT...TCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTTGGCAGCTTTGGGCCTaGGACAAGAGGAGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: EVFVGWRYWWLFDCYLWPWQLWA*DKRSLE
Trigger: TTCGAGGCTCCTCTTGTCGCAGGCCCAAAGCTGCCA...AGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp ATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGAAGACCACTCTCTGCTaGTGGGCTGGCAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IPHSYSPHNRCLPAAYLQKTTLC*WAGSFG
Trigger: CCCAAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTT...CTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCTCTAAGACCACTCTCTaGTGCTGGGCTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PIALTTGAFLLLICREVFSKTTL*CWAGSF
Trigger: AAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTTAGA...GAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACCAGGGGCAAAAGCTGTaGTGTGGGCTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: LLICREVFVGWRYWWLFDQGQKL*CGLQLW
Trigger: CCAGAGTTGGAGCCCACAGCACAGCTTTTGCCCCTG...GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAGCCCTCACAACAGGTaGCTTCCTGCTGCTTATCTG +
Preference number: 4 (lower is better)
Translates to: WPVLCLLPLKKALSATLYSPHNR*LPAAYL
Trigger: CAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCT...ATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTCCGTGGAGGATTCCATaGCCTTCAGAGGATCCACCC +
Preference number: 4 (lower is better)
Translates to: DTGGYLTVTCGLSSASFRPWRIP*PSEDPP
Trigger: GGGTGGATCCTCTGAAGGCCATGGAATCCTCCACGG...ACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGGCTGGGTCGGCAACGTaGAGACATGGGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RSSWGGDTGGYLTVTCGLAGSAT*RHGQEE
Trigger: CTCTTCTTGCCCATGTCTCCACGTTGCCGACCCAGC...CAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACGCTGGGTCGGCAACGTaGAGACATGGGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLICREVFVGWRYWWLFDAGSAT*RHGQEE
Trigger: CTCTTCTTGCCCATGTCTCCACGTTGCCGACCCAGC...GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCCTAGGACCCATGTGTTaGCAGCATCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPFLNAISSFQHPQEASLLGPMC*QHLQLF
Trigger: GAAGAGCTGGAGATGCTGCCAACACATGGGTCCTAG...GAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CCA 90 bp TACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGTCTCCAGCTCGGGAGTaGCCTTTATTTGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YWWLFDCYLWPVLCLLPLSPARE*PLFGPG
Trigger: ACCGGGCCCAAATAAAGGCCACTCCCGAGCTGGAGA...CAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGACTGGGCTGGCAGCTTTaGGCCTGCGACAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGLGWQL*ACDKRS
Trigger: GCTCCTCTTGTCGCAGGCCCAAAGCTGCCAGCCCAG...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCGAGAGGGCACAGGAATaGAGCATCCGGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSWGGDTGGYLTVTCGLSERAQE*SIRRKL
Trigger: GAGCTTCCTCCGGATGCTCCATTCCTGTGCCCTCTC...GGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTTGTGGGCTCCAACTCTaGAAGTTCTCTGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: RAGSHIPIALTTGAFLLLCGLQL*KFSGHD
Trigger: GTCATGGCCAGAGAACTTCCAGAGTTGGAGCCCACA...AAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTTACCTCCACTCAGGCTaGCAGAGGCCACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EVFVGWRYWWLFDCYLWPYLHSG*QRPLCL
Trigger: GAGACAGAGTGGCCTCTGCCAGCCTGAGTGGAGGTA...AGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGTGGCTTCCCAAGGCATaGCTCAGGCCCGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SHIPIALTTGAFLLLICRWLPKA*LRPVSL
Trigger: AAGAGAAACGGGCCTGAGCCATGCCTTGGGAAGCCA...CCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTAGATGGGATCTGTGTTaGCTGCACTGTTCACCATCA +
Preference number: 4 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASRWDLC*LHCSPS
Trigger: TGATGGTGAACAGTGCAGTCAACACAGATCCCATCT...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTCTGCCTCCTTCCGTTaGAGAAGGCCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLICREVFVGWRYWWLFDSASFR*RRPCQP
Trigger: TGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGA...GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAATGGTTGTTCACCTATaGGGCTCATGTAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LGPPWTFSQCNLLLPAPPMVVHL*GSCRQG
Trigger: TCCTTGCCTACATGAGCCTCATAGGTGAACAACCAT...TGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR GCA 90 bp TTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTACCATGAGCCAGCCAGGCCCCTaGCATGCTGGGTCGGCAACG +
Preference number: 4 (lower is better)
Translates to: LKKALSATLYNSPRIFTMSQPGP*HAGSAT
Trigger: CGTTGCCGACCCAGCATGGCAGGGGCCTGGCTGGCT...CATGGTAAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCTCTAAGACCACTCTCTaGTGCTGGGCTGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VGWRYWWLFDCYLWPVLCSKTTL*CWAGSF
Trigger: AAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTTAGA...GCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGGTGAAAGACTTGTaGAGCCTCTCCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRIPHSYSPHNRCLPAAYLVKDL*SLSTAF
Trigger: GAAGGCTGTGGAGAGGCTGCACAAGTCTTTCACCAG...ATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATCAGGGGAGCGTGCATTaGTACTTTCTCCTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: WPVLCLLPLKKALSATLYQGSVH*YFLLFR
Trigger: CCTAAAGAGGAGAAAGTAGCAATGCACGCTCCCCTG...ATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGACAGCCAGGGGAGCGTaGATTGCTACTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SHIPIALTTGAFLLLICRTARGA*IATFSS
Trigger: AGAGGAGAAAGTAGCAATGCACGCTCCCCTGGCTGT...CCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGCTGTGGCCTGTCCTCTaGCTCCTTCCGTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: WWLFDCYLWPVLCLLPLKLWPVL*LLPLKK
Trigger: CTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAG...CTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGATTCCTGCTGCTTATCTaGAGGGAGGTCTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: CLLPLKKALSATLYNSPRFLLLI*REVFVG
Trigger: CCCCACGAAGACCTCCCTGCAGATAAGCAGCAGGAA...TCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp ATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGCAACAGGTGCCTTCCTaGTGCTTATCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IPHSYSPHNRCLPAAYLQQQVPS*CLSAGR
Trigger: CCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTG...CTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp GGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGCCCTCACAACAGGTaGCTTCCTGCTGCTTATCTG +
Preference number: 4 (lower is better)
Translates to: GSHIPIALTTGAFLLLICSPHNR*LPAAYL
Trigger: CAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCT...GCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTCAGCCTTCTTCCAGATaGTCAGGGACACCGACTGGA +
Preference number: 4 (lower is better)
Translates to: SWGGDTGGYLTVTCGLSSQPSSR*SGTPTG
Trigger: TCCAGTCGGTGTCCCTGACCATCTGGAAGAAGGCTG...AGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCTGTGGGCTCCAACTCTaGAAGTTCTCTGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: VGWRYWWLFDCYLWPVLCCGLQL*KFSGHD
Trigger: GTCATGGCCAGAGAACTTCCAGAGTTGGAGCCCACA...GCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTTTCACCATCAGTCTCTaGGGAGGGCCCATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SWGGDTGGYLTVTCGLSSFTISL*GGPISR
Trigger: TCTGGAGATGGGCCCTCCCCAGAGACTGATGGTGAA...AGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTTGGCTTCCCAAGGCATaGCTCAGGCCCGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLLICREVFVGWRYWWLFWLPKA*LRPVSL
Trigger: AAGAGAAACGGGCCTGAGCCATGCCTTGGGAAGCCA...AAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AGAGTGGCTGTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGTCTTCGTGGGGTaGAGATACTGGTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: RVAVDTFAQSRLTPSSTEEVFVG*RYWWLF
Trigger: AAATAACCACCAGTATCTCCACCCCACGAAGACCTC...TTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGGCTTTATGGGAAGGTaGCAGAGTGGCTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: EVFVGWRYWWLFDCYLWPGFMGR*QSGCGH
Trigger: GTGTCCACAGCCACTCTGCCACCTTCCCATAAAGCC...AGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAACAGCTGGGTCCTCCCTaGACCTTTTCTCAATGCAAT +
Preference number: 4 (lower is better)
Translates to: WVLPGPFLNAISSFQHPQQLGPP*TFSQCN
Trigger: ATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGCTG...TTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528830.3
3UTR CAA 72 bp GACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTaGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCT +
Preference number: 4 (lower is better)
Translates to: DCYLWPVLCLLP*KKALSATLYNS
Trigger: AGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATGGGGTGCTCCCTGGTaGAAGACTTGTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLPLKKALSATLYNSPRIWGAPW*KTCAAS
Trigger: AGAGGCTGCACAAGTCTTTCACCAGGGAGCACCCCA...TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTGCCTCAGGCTCCTTCTaGCAGTTGGGGCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLKKALSATLYNSPRIFASGSF*QLGLRV
Trigger: GACCCTGAGCCCCAACTGTCAGAAGGAGCCTGAGGC...AAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525780.5
CDS-3UTR GCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGAAAGACCACTCTCTGCTaGTGGGCTGGCAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGKTTLC*WAGSFG
Trigger: CCCAAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTT...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGGGATCTGTGTTGACTaGACTGTTCACCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: PIALTTGAFLLLICREVFGICVD*TVHHQS
Trigger: AGACTGATGGTGAACAGTGCAGTCAACACAGATCCC...GAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGGGTAGTCCCCACTACTaGAGTTTGTGCTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: WWLFDCYLWPVLCLLPLKGSPHY*SLCSLL
Trigger: CAGCAGAGAGCACAAACTGCAGTAGTGGGGACTACC...CTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CCA 90 bp TTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCCTAGGACCCATGTGTTaGCAGCATCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFDCYLWPVLCLLPLKKALGPMC*QHLQLF
Trigger: GAAGAGCTGGAGATGCTGCCAACACATGGGTCCTAG...GGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCTCCTTTGATGCTCTCTaGGGATCTCTCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PIALTTGAFLLLICREVFSFDAL*GSLISK
Trigger: CTTGGAGATGAGAGATCCCCAGAGAGCATCAAAGGA...GAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTCCAAGTCGTGCCACATaGCGGGCAGCCACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPLKKALSATLYNSPRIFPSRAT*RAATEA
Trigger: TGCCTCTGTGGCTGCCCGCCATGTGGCACGACTTGG...AAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCCTGTGTCCAACCAAGACCAACAGGATaGTTGTTCACCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: SMQSPPSSTPKKRRSCVQPRPTG*LFTYEA
Trigger: AGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGG...TTGGACACAGGAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR TCA 90 bp CCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGTTTCACCATATTGCAAGGCTCTaGCTCCGCTTTCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PKQADPLFHGRGILKQFHHIARL*LRFLCS
Trigger: TGAACACAGAAAGCGGAGTCAGAGCCTTGCAATATG...GTGAAACTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR GCA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGCAGCTTTGGGCCTaGGACAAGAGGAGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLWQLWA*DKRSLE
Trigger: TTCGAGGCTCCTCTTGTCGCAGGCCCAAAGCTGCCA...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAGCCCAAAAGAACAGTaGCAGGGCCATACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: YWWLFDCYLWPVLCLLPLSPKEQ*QGHTAV
Trigger: AACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCT...CAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGCAGGGGCAAAAGCTGTaGTGTGGGCTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLQGQKL*CGLQLW
Trigger: CCAGAGTTGGAGCCCACAGCACAGCTTTTGCCCCTG...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTTGGCTTCATGTGGGTTaGTTTCGAGACCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SWGGDTGGYLTVTCGLSSWLHVG*FRDQLL
Trigger: AAGGAGCTGGTCTCGAAAGCAACCCACATGAAGCCA...AGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CCA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTCTCCAGCTCGGGAGTaGCCTTTATTTGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLSPARE*PLFGPG
Trigger: ACCGGGCCCAAATAAAGGCCACTCCCGAGCTGGAGA...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTGCAAAAGCTGTGCTGTaGGCTCCAACTCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LCLLPLKKALSATLYNSPAKAVL*APTLEV
Trigger: AACTTCCAGAGTTGGAGCCCACAGCACAGCTTTTGC...AGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGGCAAAAGCTGTGCTGTaGGCTCCAACTCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: YWWLFDCYLWPVLCLLPLAKAVL*APTLEV
Trigger: AACTTCCAGAGTTGGAGCCCACAGCACAGCTTTTGC...CAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAAACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGTGGCGGGGTCCGCGGTaGCTTCATGTGGGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ETKCHSCTTRLYGKVAEWWRGPR*LHVGCF
Trigger: AAAGCAACCCACATGAAGCCACCGCGGACCCCGCCA...CCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CCA 90 bp GAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTTTTGACTGTTACCTGTaGCCTGTCCTCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EVFVGWRYWWLFDCYLWPFDCYL*PVLCLL
Trigger: AAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAA...AGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATAGGCTTTATGGGAAGGTaGCAGAGTGGCTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LLPLKKALSATLYNSPRIGFMGR*QSGCGH
Trigger: GTGTCCACAGCCACTCTGCCACCTTCCCATAAAGCC...TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp GAAACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCCACGCTGCAGTATTTaGGCAAAGGCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ETKCHSCTTRLYGKVAEWPRCSI*AKASWA
Trigger: GGCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGG...CCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp TCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGATGGTGAGAGAGGAATaGCATCCTCTTCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: SHIPIALTTGAFLLLICRMVREE*HPLLRP
Trigger: TGGTCTTAGAAGAGGATGTCATTCCTCTCTCACCAT...CCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp TCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGATACTGGTGGTTATTTaGCTGTTACCTGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SHIPIALTTGAFLLLICRILVVI*LLPVAC
Trigger: ACAGGCCACAGGTAACAGTCAAATAACCACCAGTAT...CCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp TTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTACCATGGCATCCTGGGCCCCGTaGAGGATTCCATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LKKALSATLYNSPRIFTMASWAP*RIPWPS
Trigger: TGAAGGCCATGGAATCCTCCACGGGGCCCAGGATGC...CATGGTAAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGCAGCCTTCTTCCAGATaGTCAGGGACACCGACTGGA +
Preference number: 4 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLQPSSR*SGTPTG
Trigger: TCCAGTCGGTGTCCCTGACCATCTGGAAGAAGGCTG...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCGTGGGGTGGAGATACTaGTGGTTATTTGACTGTTAC +
Preference number: 4 (lower is better)
Translates to: AGSHIPIALTTGAFLLLIVGWRY*WLFDCY
Trigger: GTAACAGTCAAATAACCACCAGTATCTCCACCCCAC...GATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTGCTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGAGGTCTTCGTGGGGTaGAGATACTGGTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: LLLICREVFVGWRYWWLFEVFVG*RYWWLF
Trigger: AAATAACCACCAGTATCTCCACCCCACGAAGACCTC...AAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
3UTR CAA 72 bp TGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTaGTCAGCCACTCTGTATAACTCTCCTCGAATATTT +
Preference number: 4 (lower is better)
Translates to: WPVLCLLPLKKA*SATLYNSPRIF
Trigger: AAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp ATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGATACTGGTGGTTATTTaGCTGTTACCTGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IPHSYSPHNRCLPAAYLQILVVI*LLPVAC
Trigger: ACAGGCCACAGGTAACAGTCAAATAACCACCAGTAT...CTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTACCATGGGGCAAGAAGAGGCATaGCTTGCAAGGGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LKKALSATLYNSPRIFTMGQEEA*LARGLC
Trigger: GCACAAGCCCCTTGCAAGGCATGCCTCTTCTTGCCC...CATGGTAAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp CTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATAAGCCCAAAAGAACAGTaGCAGGGCCATACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLPLKKALSATLYNSPRISPKEQ*QGHTAV
Trigger: AACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCT...TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp TGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTCCACTGACATATTaGAAGGCTCTGACTCCGCTT +
Preference number: 4 (lower is better)
Translates to: CLSAGRSSWGGDTGGYLTVPLTY*KALTPL
Trigger: AAGCGGAGTCAGAGCCTTGCAATATGTCAGTGGAAC...AGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR GCA 90 bp TTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTACCATGGGCTGTGGACACATTTaGCCAAAGCAGGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: LKKALSATLYNSPRIFTMGCGHI*PKQADP
Trigger: GGGGTCAGCCTGCTTTGGGCAAATGTGTCCACAGCC...CATGGTAAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp GAAACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGTTCACCATCAGTCTCTaGGGAGGGCCCATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ETKCHSCTTRLYGKVAEWFTISL*GGPISR
Trigger: TCTGGAGATGGGCCCTCCCCAGAGACTGATGGTGAA...CCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp CTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATAGTATCCTACAGATGGTaGGAGAGGAATGACATCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLKKALSATLYNSPRIVSYRW*ERNDIL
Trigger: GAGGATGTCATTCCTCTCTCACCATCTGTAGGATAC...TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGCAGGGGAGCGTGCATTaGTACTTTCTCCTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLQGSVH*YFLLFR
Trigger: CCTAAAGAGGAGAAAGTAGCAATGCACGCTCCCCTG...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR GCA 90 bp AATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGAGGGATCTGTGTTGACTaGACTGTTCACCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: NVTHVQLGFMGRWQSGCGGICVD*TVHHQS
Trigger: AGACTGATGGTGAACAGTGCAGTCAACACAGATCCC...TCCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp AAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGTCCTTTGATGCTCTCTaGGGATCTCTCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KCHSCTTRLYGKVAEWLWSFDAL*GSLISK
Trigger: CTTGGAGATGAGAGATCCCCAGAGAGCATCAAAGGA...CCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp CTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTGGAATATCTTGTTCCTaGCTTCCCAAGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: LPLKKALSATLYNSPRIFGISCS*LPKAWL
Trigger: GAGCCATGCCTTGGGAAGCCAGGAACAAGATATTCC...AAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CCA 90 bp CTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATGTTTATTCTTTACCTaGCTTCCCAAGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPLKKALSATLYNSPRICLFFT*LPKAWL
Trigger: GAGCCATGCCTTGGGAAGCCAGGTAAAGAATAAACA...TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525780.5
CDS-3UTR TCA 90 bp CTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTTTGCCATTCCAGAAATaGACAGTGATTTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LCLLPLKKALSATLYNSPLPFQK*TVISFS
Trigger: GGAAAAAGAAATCACTGTTCATTTCTGGAATGGCAA...AGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR TCA 90 bp TTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGCCATTCCAGAAATaGACAGTGATTTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFDCYLWPVLCLLPLKKALPFQK*TVISFS
Trigger: GGAAAAAGAAATCACTGTTCATTTCTGGAATGGCAA...GGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CCA 90 bp ACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGGTGGGGTGGAGATACTaGTGGTTATTTGACTGTTAC +
Preference number: 4 (lower is better)
Translates to: TKCHSCTTRLYGKVAEWLVGWRY*WLFDCY
Trigger: GTAACAGTCAAATAACCACCAGTATCTCCACCCCAC...CAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS TCA 90 bp CGTCCCAGCCAGGGGCCTTCAGGCTTGTGGCCACGCTGCAGTATTTaGGCAAAGGCATCCTGGGCCCCGTGGAGGATTCCATGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: RPSQGPSGLWPRCSI*AKASWAPWRIPWPS
Trigger: TGAAGGCCATGGAATCCTCCACGGGGCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGGCCACAAGCCTGAAGGCCCCTGGCTGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
ENST00000528998.5
CDS GCA 90 bp AGAAGAGGCATGCCTTGCAAGGGGCTTGTGCCCGGTGAGCCAGGGTaGTTGGAGGGCAAAGGGGTAGGTGAAGGAGAGGTCCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RRGMPCKGLVPGEPG*LEGKGVGEGEVPRW
Trigger: CCACCTTGGGACCTCTCCTTCACCTACCCCTTTGCCCTCCAAGCACCCTGGCTCACCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
CDS GCA 90 bp CATGTGTTGGCAGCATCTCCAGCTCTTCCCAGCCAGCCAGGCCCCTaGCATGCTGGGTCGGCAACGTGGAGACATGGGCAAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: HVLAASPALPSQPGP*HAGSATWRHGQEEA
Trigger: TGCCTCTTCTTGCCCATGTCTCCACGTTGCCGACCCAGCATGGCAGGGGCCTGGCTGGCTGGGAAGAGCTGGAGATGCTGCCAACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
CDS CCA 90 bp GTCAGGTATGACAAGGCCACCCAGAGGAGCACGCCAGGGAGATACTaGGGTCAGGGACTTGCCTCGGGAGTGGCCTTTATTTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: VRYDKATQRSTPGRY*GQGLASGVAFIWAR
Trigger: CCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCCTCTGGGTGGCCTTGTCATACCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS GCA 90 bp ATCTGCTTCCCTTCTTGCAAGGGGCTTGTGCCCGGTGAGCCAGGGTaGTTGGAGGGCAAAGGGGTAGGTGAAGGAGAGGTCCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: ICFPSCKGLVPGEPG*LEGKGVGEGEVPRW
Trigger: CCACCTTGGGACCTCTCCTTCACCTACCCCTTTGCCCTCCAAGCACCCTGGCTCACCGGGCACAAGCCCCTTGCAAGAAGGGAAGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528998.5
CDS CCA 90 bp CTGACTCCGCTTTCTGTGTTCAGCTTCCCCTGGCGGGGTCCGCGGTaGCTTCATGTGGGTTGCTTTCGAGACCAGCTCCTTGGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: LTPLSVFSFPWRGPR*LHVGCFRDQLLGSP
Trigger: GGGACTACCAAGGAGCTGGTCTCGAAAGCAACCCACATGAAGCCACCGCGGACCCCGCCAGGGGAAGCTGAACACAGAAAGCGGAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS GCA 90 bp GGCCACCCAGAGGAGCACGCCAGGGAGATACTGGGGTCAGGGACTTaGCTCGGGAGTGGCCTTTATTTGGGCCCGGTAGTAAAAACCATC +
Preference number: 5 (lower is better)
Translates to: GHPEEHAREILGSGT*LGSGLYLGPVVKTI
Trigger: GATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCCTCTGGGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS-3UTR CAA 90 bp GCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGAGGCATGCCTaGCAAGGGGCTTGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: AGSSLDLFSMQSPPSSTPKKRHA*QGACAR
Trigger: CCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCTT...GGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp TCTCTCCAGCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCATGCCTTGCAAGGGGCTaGTGCCCGGTGAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SLQLGPPWTFSQCNLLLPCLARG*CPVSQG
Trigger: ACCCTGGCTCACCGGGCACAAGCCCCTTGCAAGGCA...TGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGCTGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS GCA 90 bp GGATCTCTCATCTCCAAGCCCAAAAGAACAGTGCCAGGGCCATACTaGTGTTGGCCTGGCTCCCAGAGTGCCAGCACCTTATCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: GSLISKPKRTVPGPY*CWPGSQSASTLSPG
Trigger: ACCAGGGGATAAGGTGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCTTGGAGATGAGAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 90 bp ACATATTGCAAGGCTCTGACTCCGCTTTCTGTGTTCAGCTTCCCCTaGCGGGGTCCGCGGTGGCTTCATGTGGGTTGCTTTCGAGACCAG +
Preference number: 5 (lower is better)
Translates to: TYCKALTPLSVFSFP*RGPRWLHVGCFRDQ
Trigger: CTGGTCTCGAAAGCAACCCACATGAAGCCACCGCGGACCCCGCCAGGGGAAGCTGAACACAGAAAGCGGAGTCAGAGCCTTGCAATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS CCA 90 bp GGAGCACGCCAGGGAGATACTGGGGTCAGGGACTTGCCTCGGGAGTaGCCTTTATTTGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: GARQGDTGVRDLPRE*PLFGPGSKNHLLPF
Trigger: GAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS-3UTR CAA 90 bp CCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGTTTCACGGTGAGCCAGGGTGCTaGGAGGGCAAAGGGGTAGGT +
Preference number: 5 (lower is better)
Translates to: PKQADPLFHGRGILKQFHGEPGC*EGKGVG
Trigger: ACCTACCCCTTTGCCCTCCAAGCACCCTGGCTCACC...GTGAAACTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TGTCTCTCCAGCTGGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCGGTGAGCCAGGGTGCTaGGAGGGCAAAGGGGTAGGT +
Preference number: 5 (lower is better)
Translates to: CLSSWVLPGPFLNAISSFGEPGC*EGKGVG
Trigger: ACCTACCCCTTTGCCCTCCAAGCACCCTGGCTCACC...GAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCCAGCTGGAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp TACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGTGCCTTGCAAGGGGCTaGTGCCCGGTGAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: YWWLFDCYLWPVLCLLPLCLARG*CPVSQG
Trigger: ACCCTGGCTCACCGGGCACAAGCCCCTTGCAAGGCA...CAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp ATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGAGGGCCATACTGCTGTaGGCCTGGCTCCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: ICPKQADPLFHGRGILKQRAILL*AWLPEC
Trigger: GCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCT...CTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp GGCCCTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAAGATGGGATCTGTGTaGACTGCACTGTTCACCATC +
Preference number: 5 (lower is better)
Translates to: GPGREPQGRIPHSYSPHNKMGSV*TALFTI
Trigger: GATGGTGAACAGTGCAGTCAACACAGATCCCATCTT...GTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTCTCTGCCTCCTTCCGTaGAAGAAGGCCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASLCLLP*KKALSA
Trigger: GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp GACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCCGTAGGCAAGGAGCGATaGTGGCCACAGAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: DLFSMQSPPSSTPKKRRSVGKER*WPQSCP
Trigger: AGGGCAGCTCTGTGGCCACAATCGCTCCTTGCCTAC...GGAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS GCA 90 bp TTGATGCTCTCTGGGGATCTCTCATCTCCAAGCCCAAAAGAACAGTaGCAGGGCCATACTGCTGTTGGCCTGGCTCCCAGAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LMLSGDLSSPSPKEQ*QGHTAVGLAPRVPA
Trigger: TGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCTTGGAGATGAGAGATCCCCAGAGAGCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 90 bp GGTGAGAGAGGAATGACATCCTCTTCTAAGACCACTCTCTGCTGCTaGGCTGGCAGCTTTGGGCCTGCGACAAGAGGAGCCTCGAATTCC +
Preference number: 5 (lower is better)
Translates to: GERGMTSSSKTTLCC*AGSFGPATRGASNS
Trigger: GGAATTCGAGGCTCCTCTTGTCGCAGGCCCAAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTTAGAAGAGGATGTCATTCCTCTCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTCAGGGGCCTTCAGGCTaGTGGCCACGCTGCAGTATT +
Preference number: 5 (lower is better)
Translates to: YSPHNRCLPAAYLQGGLRQGPSG*WPRCSI
Trigger: AATACTGCAGCGTGGCCACAAGCCTGAAGGCCCCTG...ACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTTGCCTTGCAAGGGGCTaGTGCCCGGTGAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: CLSAGRSSWGGDTGGYLTCLARG*CPVSQG
Trigger: ACCCTGGCTCACCGGGCACAAGCCCCTTGCAAGGCA...AGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCGCTAGGACCCATGTGTaGGCAGCATCTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: CYLWPVLCLLPLKKALSAARTHV*AASPAL
Trigger: AAGAGCTGGAGATGCTGCCAACACATGGGTCCTAGC...GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp CGTCGCTCCTGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGATGGGCTAGGACCCATGTGTaGGCAGCATCTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: RRSCVQDQPGMCPRPTGWARTHV*AASPAL
Trigger: AAGAGCTGGAGATGCTGCCAACACATGGGTCCTAGC...CCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACAGGAGCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTTCGAGACCAGCTCCTaGGTAGTCCCCACTACTGCA +
Preference number: 5 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASFETSS*VVPTTA
Trigger: TGCAGTAGTGGGGACTACCAAGGAGCTGGTCTCGAA...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CAA 90 bp CTGGCAGGGAGCCCCAGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTTGTTCCACTGACATATaGCAAGGCTCTGACTCCGCT +
Preference number: 5 (lower is better)
Translates to: LAGSPRAGSHIPIALTTGCSTDI*QGSDSA
Trigger: AGCGGAGTCAGAGCCTTGCAATATGTCAGTGGAACA...ACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCTGGGGCTCCCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS TCA 90 bp GCAAAAGCTGTGCTGTGGGCTCCAACTCTGGAAGTTCTCTGGCCATaGCTTCTGAGGTCCTGGTTAGAGGCCACCAAGTCGTGCCACATG +
Preference number: 5 (lower is better)
Translates to: AKAVLWAPTLEVLWP*LLRSWLEATKSCHM
Trigger: CATGTGGCACGACTTGGTGGCCTCTAACCAGGACCTCAGAAGTCATGGCCAGAGAACTTCCAGAGTTGGAGCCCACAGCACAGCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS TCA 90 bp CCAACCAGGGATGTGTCCAAGACCAACAGGATGGTTGTTCACCTATaGGGCTCATGTAGGCAAGGAGCGATTGTGGCCACAGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PTRDVSKTNRMVVHL*GSCRQGAIVATELP
Trigger: GGGCAGCTCTGTGGCCACAATCGCTCCTTGCCTACATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526227.3
ENST00000528830.3
ENST00000528998.5
CDS GCA 90 bp GATGGTGAGAGAGGAATGACATCCTCTTCTAAGACCACTCTCTGCTaGTGGGCTGGCAGCTTTGGGCCTGCGACAAGAGGAGCCTCGAAT +
Preference number: 5 (lower is better)
Translates to: DGERGMTSSSKTTLC*WAGSFGPATRGASN
Trigger: ATTCGAGGCTCCTCTTGTCGCAGGCCCAAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTTAGAAGAGGATGTCATTCCTCTCTCACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 90 bp AGGCATGGCTCAGGCCCGTTTCTCTTCCAATACCTCCACTCAGGCTaGCAGAGGCCACTCTGTCTCAGAGGCATCTCAAGAAAGATGGGA +
Preference number: 5 (lower is better)
Translates to: RHGSGPFLFQYLHSG*QRPLCLRGISRKMG
Trigger: TCCCATCTTTCTTGAGATGCCTCTGAGACAGAGTGGCCTCTGCCAGCCTGAGTGGAGGTATTGGAAGAGAAACGGGCCTGAGCCATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp ATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGGCCACGCTGCAGTATTaGAGCAAAGGCATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ICPKQADPLFHGRGILKQATLQY*SKGILG
Trigger: GCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGGC...CTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGGCCACGCTGCAGTATTaGAGCAAAGGCATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SSLDLFSMQSPPSSTPKKATLQY*SKGILG
Trigger: GCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGGC...CTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp AGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGCAGGGGCCTTCAGGCTaGTGGCCACGCTGCAGTATT +
Preference number: 5 (lower is better)
Translates to: RSSWGGDTGGYLTVTCGLQGPSG*WPRCSI
Trigger: AATACTGCAGCGTGGCCACAAGCCTGAAGGCCCCTG...CAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCACCCCACGAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp CTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTAAGAAGAGGCATGCCTaGCAAGGGGCTTGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: LCLLPLKKALSATLYNSPKKRHA*QGACAR
Trigger: CCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCTT...AGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp CTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACAAGAAGAGGCATGCCTaGCAAGGGGCTTGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: LLICREVFVGWRYWWLFDKKRHA*QGACAR
Trigger: CCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCTT...GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATGCTAGGACCCATGTGTaGGCAGCATCTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: WPVLCLLPLKKALSATLYARTHV*AASPAL
Trigger: AAGAGCTGGAGATGCTGCCAACACATGGGTCCTAGC...ATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCCATCTGCTTCCCTTCTaGCTAGGACCCATGTGTTGG +
Preference number: 5 (lower is better)
Translates to: CYLWPVLCLLPLKKALSAHLLPF*LGPMCW
Trigger: CCAACACATGGGTCCTAGCAAGAAGGGAAGCAGATG...GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCACAGGTAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp GGGTCCTCCCTGGACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGGGGAGTGGCCTTTATTaGGGCCCGGTAGTAAAAACC +
Preference number: 5 (lower is better)
Translates to: GSSLDLFSMQSPPSSTPKGSGLY*GPVVKT
Trigger: GGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCC...CTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTCCAGGGAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp ATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGCTCTGCCTCCTTCCGTaGAAGAAGGCCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ICPKQADPLFHGRGILKQLCLLP*KKALSA
Trigger: GGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAG...CTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp CTGCTTATCTGCAGGGAGGTCTTCGTGGGGTGGAGATACTGGTGGTTATTTGACGCCACGCTGCAGTATTaGAGCAAAGGCATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLICREVFVGWRYWWLFDATLQY*SKGILG
Trigger: GCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGGC...GTCAAATAACCACCAGTATCTCCACCCCACGAAGACCTCCCTGCAGATAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCCTGTGTCCAACATCTGCTTCCCTTCTaGCTAGGACCCATGTGTTGG +
Preference number: 5 (lower is better)
Translates to: SMQSPPSSTPKKRRSCVQHLLPF*LGPMCW
Trigger: CCAACACATGGGTCCTAGCAAGAAGGGAAGCAGATG...TTGGACACAGGAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp AGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTGGGAGTGGCCTTTATTaGGGCCCGGTAGTAAAAACC +
Preference number: 5 (lower is better)
Translates to: RAGSHIPIALTTGAFLLLGSGLY*GPVVKT
Trigger: GGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCC...AAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp CTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATAAGGGCCATACTGCTGTaGGCCTGGCTCCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: LLPLKKALSATLYNSPRIRAILL*AWLPEC
Trigger: GCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCT...TATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 90 bp TCAGCACTGCCCTTGCAGTCAACGAGGAAAGGGTTAGCTCGGGAGTaGCCTTTATTTGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SALPLQSTRKGLARE*PLFGPGSKNHLLPF
Trigger: GAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGCTAACCCTTTCCTCGTTGACTGCAAGGGCAGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526227.3
ENST00000528998.5
CDS-3UTR CAA 90 bp CCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTTAAAGCAGTTTCACCATCTGCTTCCCTTCTaGCTAGGACCCATGTGTTGG +
Preference number: 5 (lower is better)
Translates to: PKQADPLFHGRGILKQFHHLLPF*LGPMCW
Trigger: CCAACACATGGGTCCTAGCAAGAAGGGAAGCAGATG...GTGAAACTGCTTTAAGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp TGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAGTGGCTTCATGTGGGTaGCTTTCGAGACCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: CLLPLKKALSATLYNSPRVASCG*LSRPAP
Trigger: AGGAGCTGGTCTCGAAAGCAACCCACATGAAGCCAC...TCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CAA 90 bp TGGCCTGTCCTCTGCCTCCTTCCGTTGAAGAAGGCCTTGTCAGCCACTCTGTATCCGTTGAAGAAGGCCTaGTCAGCCACTCTGTATAAC +
Preference number: 5 (lower is better)
Translates to: WPVLCLLPLKKALSATLYPLKKA*SATLYN
Trigger: GTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGG...ATACAGAGTGGCTGACAAGGCCTTCTTCAACGGAAGGAGGCAGAGGACAGGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp AGGGCAGGATCCCACATTCCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTCCGTTGAAGAAGGCCTaGTCAGCCACTCTGTATAAC +
Preference number: 5 (lower is better)
Translates to: RAGSHIPIALTTGAFLLLPLKKA*SATLYN
Trigger: GTTATACAGAGTGGCTGACAAGGCCTTCTTCAACGG...AAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGGAATGTGGGATCCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp GTGGACACATTTGCCCAAAGCAGGCTGACCCCCTCTTCCACGGAAGAGGCATCTGATACTGGTGGTTATTaGACTGTTACCTGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VDTFAQSRLTPSSTEEASDTGGY*TVTCGL
Trigger: CAGGCCACAGGTAACAGTCAAATAACCACCAGTATC...AGATGCCTCTTCCGTGGAAGAGGGGGTCAGCCTGCTTTGGGCAAATGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS GCA 90 bp CAGAGATCAAGGCGATGCCTCTATAAGCTGAGGAACACCAAAGCCTaGCAGCAAGCCATGAGAAGCCAGAAGCAGGGCATGGGAATGATT +
Preference number: 5 (lower is better)
Translates to: QRSRRCLYKLRNTKA*QQAMRSQKQGMGMI
Trigger: AATCATTCCCATGCCCTGCTTCTGGCTTCTCATGGCTTGCTGGCAGGCTTTGGTGTTCCTCAGCTTATAGAGGCATCGCCTTGATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CCA 90 bp TCCTGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGATaGTTGTTCACCTATGAGGCTCATGTAGGCAAGGAGCGATTGTGG +
Preference number: 5 (lower is better)
Translates to: SCVQDQPGMCPRPTG*LFTYEAHVGKERLW
Trigger: CCACAATCGCTCCTTGCCTACATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528830.3
ENST00000528998.5
CDS-3UTR CAA 90 bp GAAACAAAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGGGTGAGCCAGGGTGCTaGGAGGGCAAAGGGGTAGGT +
Preference number: 5 (lower is better)
Translates to: ETKCHSCTTRLYGKVAEWGEPGC*EGKGVG
Trigger: ACCTACCCCTTTGCCCTCCAAGCACCCTGGCTCACC...CCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTTTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp CCTATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCAAGATGGGATCTGTGTaGACTGCACTGTTCACCATC +
Preference number: 5 (lower is better)
Translates to: PIALTTGAFLLLICREVFKMGSV*TALFTI
Trigger: GATGGTGAACAGTGCAGTCAACACAGATCCCATCTT...GAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp GACCTTTTCTCAATGCAATCTCCTCCTTCCAGCACCCCCAAGAAGCGTCGCTCCAGACCAACAGGATGGTaGTTCACCTATGAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: DLFSMQSPPSSTPKKRRSRPTGW*FTYEAH
Trigger: ATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCT...GGAGCGACGCTTCTTGGGGGTGCTGGAAGGAGGAGATTGCATTGAGAAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS-3UTR CAA 90 bp TATAGCCCTCACAACAGGTGCCTTCCTGCTGCTTATCTGCAGGGAGGTCTTCGTGATACTGGTGGTTATTaGACTGTTACCTGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: YSPHNRCLPAAYLQGGLRDTGGY*TVTCGL
Trigger: CAGGCCACAGGTAACAGTCAAATAACCACCAGTATC...ACGAAGACCTCCCTGCAGATAAGCAGCAGGAAGGCACCTGTTGTGAGGGCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS-3UTR CAA 90 bp AAATGTCACTCATGTACAACTAGGCTTTATGGGAAGGTGGCAGAGTGGCTGTGGCCCCACTACTGCAGTTaGTGCTCTCTGCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: KCHSCTTRLYGKVAEWLWPHYCS*CSLLFV
Trigger: CACAAACAGCAGAGAGCACAAACTGCAGTAGTGGGG...CCACAGCCACTCTGCCACCTTCCCATAAAGCCTAGTTGTACATGAGTGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CAA 90 bp TGGAGATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTAGATGTTGGAATATCTaGTTCCTGGCTTCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: WRYWWLFDCYLWPVLCLLRCWNI*FLASQG
Trigger: GCCTTGGGAAGCCAGGAACAAGATATTCCAACATCT...AAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CAA 90 bp GATACTGGTGGTTATTTGACTGTTACCTGTGGCCTGTCCTCTGCCTCCTTCCGTTCTTCTTTGCAGATGTaGGAATATCTTGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: DTGGYLTVTCGLSSASFRSSLQM*EYLVPG
Trigger: GCCAGGAACAAGATATTCCAACATCTGCAAAGAAGA...ACGGAAGGAGGCAGAGGACAGGCCACAGGTAACAGTCAAATAACCACCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS-3UTR CAA 90 bp TTGAAGAAGGCCTTGTCAGCCACTCTGTATAACTCTCCTCGAATATTTACCATGGGGAGTGGCCTTTATTaGGGCCCGGTAGTAAAAACC +
Preference number: 5 (lower is better)
Translates to: LKKALSATLYNSPRIFTMGSGLY*GPVVKT
Trigger: GGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCC...CATGGTAAATATTCGAGGAGAGTTATACAGAGTGGCTGACAAGGCCTTCTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS GCA 90 bp AAATGGGAGATGACACATTTCTGTGGTTTAAGCCACTCCGTTTGTTaGACTTTGTTAGGGAGCCCTAGCAAACTAATACACTCAATGGTA +
Preference number: 5 (lower is better)
Translates to: KWEMTHFCGLSHSVC*TLLGSPSKLIHSMV
Trigger: TACCATTGAGTGTATTAGTTTGCTAGGGCTCCCTAACAAAGTGCAACAAACGGAGTGGCTTAAACCACAGAAATGTGTCATCTCCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS GCA 72 bp CATGGGCAAGAAGAGGCATGCCTTGCAAGGGGCTTGTaGCCGGTGAGCCAGGGTGCTTGGAGGGCAAAGGGG +
Preference number: 6 (lower is better)
Translates to: HGQEEACLARGL*PVSQGAWRAKG
Trigger: CCCCTTTGCCCTCCAAGCACCCTGGCTCACCGGGCACAAGCCCCTTGCAAGGCATGCCTCTTCTTGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
CDS CCA 72 bp TCAGCTTCCCCTGGCGGGGTCCGCGGTGGCTTCATGTaGGTTGCTTTCGAGACCAGCTCCTTGGTAGTCCCC +
Preference number: 6 (lower is better)
Translates to: SASPGGVRGGFM*VAFETSSLVVP
Trigger: GGGGACTACCAAGGAGCTGGTCTCGAAAGCAACCCACATGAAGCCACCGCGGACCCCGCCAGGGGAAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS TCA 72 bp CAGGGGCCTTCAGGCTTGTGGCCACGCTGCAGTATTTaGGCAAAGGCATCCTGGGCCCCGTGGAGGATTCCA +
Preference number: 6 (lower is better)
Translates to: QGPSGLWPRCSI*AKASWAPWRIP
Trigger: TGGAATCCTCCACGGGGCCCAGGATGCCTTTGCTCAAATACTGCAGCGTGGCCACAAGCCTGAAGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
ENST00000528998.5
CDS GCA 72 bp GACCACTCTCTGCTGCTGGGCTGGCAGCTTTGGGCCTaGGACAAGAGGAGCCTCGAATTCCACAAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: DHSLLLGWQLWA*DKRSLEFHKQD
Trigger: GTCCTGCTTGTGGAATTCGAGGCTCCTCTTGTCGCAGGCCCAAAGCTGCCAGCCCAGCAGCAGAGAGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS GCA 72 bp GAGGAGCACGCCAGGGAGATACTGGGGTCAGGGACTTaGCTCGGGAGTGGCCTTTATTTGGGCCCGGTAGTA +
Preference number: 6 (lower is better)
Translates to: EEHAREILGSGT*LGSGLYLGPVV
Trigger: TACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CCA 72 bp GACAAGGCCACCCAGAGGAGCACGCCAGGGAGATACTaGGGTCAGGGACTTGCCTCGGGAGTGGCCTTTATT +
Preference number: 6 (lower is better)
Translates to: DKATQRSTPGRY*GQGLASGVAFI
Trigger: AATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCCTCTGGGTGGCCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CAA 72 bp AGAGGAGCACGCCAGGGAGATACTGGGGTCAGGGACTaGCCTCGGGAGTGGCCTTTATTTGGGCCCGGTAGT +
Preference number: 6 (lower is better)
Translates to: RGARQGDTGVRD*PREWPLFGPGS
Trigger: ACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CCA 72 bp AAGACTTGTGCAGCCTCTCCACAGCCTTCTTCCAGATaGTCAGGGACACCGACTGGACCCCACCTAGGGGCA +
Preference number: 6 (lower is better)
Translates to: KTCAASPQPSSR*SGTPTGPHLGA
Trigger: TGCCCCTAGGTGGGGTCCAGTCGGTGTCCCTGACCATCTGGAAGAAGGCTGTGGAGAGGCTGCACAAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 72 bp CTTTCTGTGTTCAGCTTCCCCTGGCGGGGTCCGCGGTaGCTTCATGTGGGTTGCTTTCGAGACCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: LSVFSFPWRGPR*LHVGCFRDQLL
Trigger: AAGGAGCTGGTCTCGAAAGCAACCCACATGAAGCCACCGCGGACCCCGCCAGGGGAAGCTGAACACAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS CCA 72 bp AAGGCTCTGACTCCGCTTTCTGTGTTCAGCTTCCCCTaGCGGGGTCCGCGGTGGCTTCATGTGGGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: KALTPLSVFSFP*RGPRWLHVGCF
Trigger: AAAGCAACCCACATGAAGCCACCGCGGACCCCGCCAGGGGAAGCTGAACACAGAAAGCGGAGTCAGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS CAA 72 bp CAAGCCCAAAAGAACAGTGCCAGGGCCATACTGCTGTaGGCCTGGCTCCCAGAGTGCCAGCACCTTATCCCC +
Preference number: 6 (lower is better)
Translates to: QAQKNSARAILL*AWLPECQHLIP
Trigger: GGGGATAAGGTGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CAA 90 bp AGGCCACCCAGAGGAGCACGCCAGGGAGATACTGGGGTCAGGGACTaGCCTCGGGAGTGGCCTTTATTTGGGCCCGGTAGTAAAAACCAT +
Preference number: 6 (lower is better)
Translates to: RPPRGARQGDTGVRD*PREWPLFGPGSKNH
Trigger: ATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTGGCGTGCTCCTCTGGGTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CAA 90 bp TCTCATCTCCAAGCCCAAAAGAACAGTGCCAGGGCCATACTGCTGTaGGCCTGGCTCCCAGAGTGCCAGCACCTTATCCCCTGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: SHLQAQKNSARAILL*AWLPECQHLIPWSQ
Trigger: CTGAGACCAGGGGATAAGGTGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCTTGGAGATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 72 bp GGAATGACATCCTCTTCTAAGACCACTCTCTGCTGCTaGGCTGGCAGCTTTGGGCCTGCGACAAGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: GMTSSSKTTLCC*AGSFGPATRGA
Trigger: GGCTCCTCTTGTCGCAGGCCCAAAGCTGCCAGCCCAGCAGCAGAGAGTGGTCTTAGAAGAGGATGTCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS GCA 72 bp ATCTCCAAGCCCAAAAGAACAGTGCCAGGGCCATACTaGTGTTGGCCTGGCTCCCAGAGTGCCAGCACCTTA +
Preference number: 6 (lower is better)
Translates to: ISKPKRTVPGPY*CWPGSQSASTL
Trigger: TAAGGTGCTGGCACTCTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCTTGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS GCA 72 bp TCTGGGGATCTCTCATCTCCAAGCCCAAAAGAACAGTaGCAGGGCCATACTGCTGTTGGCCTGGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: SGDLSSPSPKEQ*QGHTAVGLAPR
Trigger: TCTGGGAGCCAGGCCAACAGCAGTATGGCCCTGGCACTGTTCTTTTGGGCTTGGAGATGAGAGATCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CAA 72 bp GCTGCCCTCAGCACTGCCCTCGGGAGTGGCCTTTATTaGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: AALSTALGSGLY*GPVVKTICFPS
Trigger: AGAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGGGCAGTGCTGAGGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528830.3
CDS GCA 72 bp AGGCGATGCCTCTATAAGCTGAGGAACACCAAAGCCTaGCAGCAAGCCATGAGAAGCCAGAAGCAGGGCATG +
Preference number: 6 (lower is better)
Translates to: RRCLYKLRNTKA*QQAMRSQKQGM
Trigger: CATGCCCTGCTTCTGGCTTCTCATGGCTTGCTGGCAGGCTTTGGTGTTCCTCAGCTTATAGAGGCATCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CCA 72 bp TCAGGCCCGTTTCTCTTCCAATACCTCCACTCAGGCTaGCAGAGGCCACTCTGTCTCAGAGGCATCTCAAGA +
Preference number: 6 (lower is better)
Translates to: SGPFLFQYLHSG*QRPLCLRGISR
Trigger: TCTTGAGATGCCTCTGAGACAGAGTGGCCTCTGCCAGCCTGAGTGGAGGTATTGGAAGAGAAACGGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 72 bp CAGGGAGATACTGGGGTCAGGGACTTGCCTCGGGAGTaGCCTTTATTTGGGCCCGGTAGTAAAAACCATCTG +
Preference number: 6 (lower is better)
Translates to: QGDTGVRDLPRE*PLFGPGSKNHL
Trigger: CAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAGTATCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CAA 72 bp GACCCCCTGTCTCTCCAGCTCGGGAGTGGCCTTTATTaGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: DPLSLQLGSGLY*GPVVKTICFPS
Trigger: AGAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGCTGGAGAGACAGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CAA 72 bp CTGGGGTCAGGGACTTGCCTCGGGAGTGGCCTTTATTaGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LGSGTCLGSGLY*GPVVKTICFPS
Trigger: AGAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGGCAAGTCCCTGACCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CAA 90 bp TGGCCTTTATTTGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTCTaGCTAGGACCCATGTGTTGGCAGCATCTCCAGCTCTTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: WPLFGPGSKNHLLPF*LGPMCWQHLQLFPA
Trigger: GGCTGGGAAGAGCTGGAGATGCTGCCAACACATGGGTCCTAGCAAGAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
CDS GCA 72 bp TTTCTCCTCTTTAGGACCTTCCAGGGGCAAAAGCTGTaGTGTGGGCTCCAACTCTGGAAGTTCTCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: FLLFRTFQGQKL*CGLQLWKFSGH
Trigger: ATGGCCAGAGAACTTCCAGAGTTGGAGCCCACAGCACAGCTTTTGCCCCTGGAAGGTCCTAAAGAGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326053.10
ENST00000525780.5
CDS CCA 72 bp CCCTTGCAGTCAACGAGGAAAGGGTTAGCTCGGGAGTaGCCTTTATTTGGGCCCGGTAGTAAAAACCATCTG +
Preference number: 6 (lower is better)
Translates to: PLQSTRKGLARE*PLFGPGSKNHL
Trigger: CAGATGGTTTTTACTACCGGGCCCAAATAAAGGCCACTCCCGAGCTAACCCTTTCCTCGTTGACTGCAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526227.3
ENST00000528998.5
CDS CAA 72 bp TTTGGGCCCGGTAGTAAAAACCATCTGCTTCCCTTCTaGCTAGGACCCATGTGTTGGCAGCATCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FGPGSKNHLLPF*LGPMCWQHLQL
Trigger: GAGCTGGAGATGCTGCCAACACATGGGTCCTAGCAAGAAGGGAAGCAGATGGTTTTTACTACCGGGCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326053.10
ENST00000525780.5
ENST00000526227.3
ENST00000527607.1
ENST00000528830.3
CDS CAA 72 bp GACCAACCAGGGATGTGTCCAAGACCAACAGGATGGTaGTTCACCTATGAGGCTCATGTAGGCAAGGAGCGA +
Preference number: 6 (lower is better)
Translates to: DQPGMCPRPTGW*FTYEAHVGKER
Trigger: TCGCTCCTTGCCTACATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526227.3
ENST00000528830.3
ENST00000528998.5
CDS CAA 90 bp TGTGTCCAAGACCAACCAGGGATGTGTCCAAGACCAACAGGATGGTaGTTCACCTATGAGGCTCATGTAGGCAAGGAGCGATTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: CVQDQPGMCPRPTGW*FTYEAHVGKERLWP
Trigger: TGGCCACAATCGCTCCTTGCCTACATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526227.3
ENST00000528830.3
ENST00000528998.5
CDS TCA 72 bp GATGTGTCCAAGACCAACAGGATGGTTGTTCACCTATaGGGCTCATGTAGGCAAGGAGCGATTGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: DVSKTNRMVVHL*GSCRQGAIVAT
Trigger: TGTGGCCACAATCGCTCCTTGCCTACATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGGACACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526227.3
ENST00000528830.3
ENST00000528998.5
CDS CCA 72 bp GATGTTGGAATATCTTGTTCCTGGCTTCCCAAGGCATaGCTCAGGCCCGTTTCTCTTCCAATACCTCCACTC +
Preference number: 6 (lower is better)
Translates to: DVGISCSWLPKA*LRPVSLPIPPL
Trigger: GAGTGGAGGTATTGGAAGAGAAACGGGCCTGAGCCATGCCTTGGGAAGCCAGGAACAAGATATTCCAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS CCA 72 bp CAAGACCAACCAGGGATGTGTCCAAGACCAACAGGATaGTTGTTCACCTATGAGGCTCATGTAGGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: QDQPGMCPRPTG*LFTYEAHVGKE
Trigger: CTCCTTGCCTACATGAGCCTCATAGGTGAACAACCATCCTGTTGGTCTTGGACACATCCCTGGTTGGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526227.3
ENST00000528830.3
ENST00000528998.5
CDS GCA 72 bp TGCTTTCGAGACCAGCTCCTTGGTAGTCCCCACTACTaGAGTTTGTGCTCTCTGCTGTTTGTGATCCTTTTC +
Preference number: 6 (lower is better)
Translates to: CFRDQLLGSPHY*SLCSLLFVILF
Trigger: GAAAAGGATCACAAACAGCAGAGAGCACAAACTGCAGTAGTGGGGACTACCAAGGAGCTGGTCTCGAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS CAA 72 bp ATGATTCTTCTTCATAGCTCTCAGAAGGAACCAACCTaGCCAACCCCTGGACTTCCAGCCTCCAGAAATGGG +
Preference number: 6 (lower is better)
Translates to: MILLHSSQKEPT*PTPGLPASRNG
Trigger: CCCATTTCTGGAGGCTGGAAGTCCAGGGGTTGGCAAGGTTGGTTCCTTCTGAGAGCTATGAAGAAGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CAA 72 bp CGAGACCAGCTCCTTGGTAGTCCCCACTACTGCAGTTaGTGCTCTCTGCTGTTTGTGATCCTTTTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: RDQLLGSPHYCS*CSLLFVILFFF
Trigger: AAAGAAGAAAAGGATCACAAACAGCAGAGAGCACAAACTGCAGTAGTGGGGACTACCAAGGAGCTGGTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326053.10
CDS CCA 72 bp TCCAGTGTGATTGATGTCCTTATAAAGGGGGAAATGTaGGCAGACACACACTCAGGGAGAAAGCCCCATAAA +
Preference number: 6 (lower is better)
Translates to: SSVIDVLIKGEM*ADTHSGRKPHK
Trigger: TTTATGGGGCTTTCTCCCTGAGTGTGTGTCTGCCCACATTTCCCCCTTTATAAGGACATCAATCACACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CCA 72 bp CAATGGTATTACATGTTCACTTCTACAACATGGCCATaGGAGAGCTGTGCTTATGCAAGAAACCAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: QWYYMFTSTTWP*ESCAYARNQPA
Trigger: AGCAGGCTGGTTTCTTGCATAAGCACAGCTCTCCCATGGCCATGTTGTAGAAGTGAACATGTAATACCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS GCA 72 bp ATGACACATTTCTGTGGTTTAAGCCACTCCGTTTGTTaGACTTTGTTAGGGAGCCCTAGCAAACTAATACAC +
Preference number: 6 (lower is better)
Translates to: MTHFCGLSHSVC*TLLGSPSKLIH
Trigger: GTGTATTAGTTTGCTAGGGCTCCCTAACAAAGTGCAACAAACGGAGTGGCTTAAACCACAGAAATGTGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1
CDS CCA 72 bp TACACTCAATGGTATTACATGTTCACTTCTACAACATaGCCATGGGAGAGCTGTGCTTATGCAAGAAACCAG +
Preference number: 6 (lower is better)
Translates to: YTQWYYMFTSTT*PWESCAYARNQ
Trigger: CTGGTTTCTTGCATAAGCACAGCTCTCCCATGGCCATGTTGTAGAAGTGAACATGTAATACCATTGAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527607.1