RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C10ORF90 (Homo sapiens)

Ensembl gene IDs: ENSG00000154493

Ensembl transcript IDs: ENST00000284694.11, ENST00000356858.7, ENST00000368674.5, ENST00000424927.5, ENST00000432642.5, ENST00000463082.1, ENST00000480379.5, ENST00000488181.3, ENST00000657225.1

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTaGTGTACATGTTCAGAAAGGTTTCAAATATACTATATGATGACC +
Preference number: 1 (lower is better)
Translates to: RALHPPVSKSASSIG*CTCSERFQIYYMMT
Trigger: GGTCATCATATAGTATATTTGAAACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR TCA 90 bp GTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTaGCCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCA +
Preference number: 1 (lower is better)
Translates to: VSSGLHGGGFPTTDC*PIFSRVIVSVWLGS
Trigger: TGACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR-3UTR CCA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGATCCAGTGGGTTACATaGAGGTGGTTTCCCCACAAC +
Preference number: 2 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKEIQWVT*RWFPHN
Trigger: GTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR CCA 90 bp GAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGATGTGGCATTTGCATAACTaGCAGGTGCTGAGATTGAAA +
Preference number: 2 (lower is better)
Translates to: EWGGVTEGPLTAPGHKEMWHLHN*QVLRLK
Trigger: TTTCAATCTCAGCACCTGCCAGTTATGCAAATGCCA...CATCTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR CCA 90 bp TCTGTGAATGTTGACTCCGCTGCGGTTAGCCAGAGATTGCTTGGCGTGATGTGCCAGCAGGGCAGTCCCTaGAGTGTTTCATCATCTTAT +
Preference number: 2 (lower is better)
Translates to: SVNVDSAAVSQRLLGVMCQQGSP*SVSSSY
Trigger: ATAAGATGATGAAACACTCCAGGGACTGCCCTGCTG...GCACATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAACATTCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
3UTR-3UTR CCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTGGGTTACATGGAGGTaGTTTCCCCACAACAGATTG +
Preference number: 2 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGWVTWR*FPHNRL
Trigger: CAATCTGTTGTGGGGAAACCACCTCCATGTAACCCA...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR TCA 90 bp TGCTCTGTGAATGTTGACTCCGCTGCGGTTAGCCAGAGATTGCTTGGCGTGATGCAATCATCTGGGAGATaGCTATGGATGAAATCATTT +
Preference number: 2 (lower is better)
Translates to: CSVNVDSAAVSQRLLGVMQSSGR*LWMKSF
Trigger: AAATGATTTCATCCATAGTCATCTCCCAGATGATTG...CATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAACATTCACAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
3UTR-3UTR CCA 90 bp TCTGTGAATGTTGACTCCGCTGCGGTTAGCCAGAGATTGCTTGGCGTGATGTGCTTCTCATCAATCATCTaGGAGATGACTATGGATGAA +
Preference number: 2 (lower is better)
Translates to: SVNVDSAAVSQRLLGVMCFSSII*EMTMDE
Trigger: TTCATCCATAGTCATCTCCCAGATGATTGATGAGAA...GCACATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAACATTCACAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
3UTR CAA 90 bp TGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTaGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: CIQWVTWRWFPHNRL*TYFLEGYCFCLAWV
Trigger: GACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR CAA 90 bp GACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATaGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: DCIQWVTWRWFPHNR*LTYFLEGYCFCLAW
Trigger: CCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR-3UTR CCA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGTGTTTCTGTTTGGCTTaGGTCAGTAATTCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQCFCLA*VSNSGS
Trigger: ACTTCCTGAATTACTGACCCAAGCCAAACAGAAACA...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR-3UTR CCA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTATTCTCTGGTGAGGAATaGGGCGGGGTGACTGAGGGC +
Preference number: 2 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLFSGEE*GGVTEG
Trigger: GCCCTCAGTCACCCCGCCCCATTCCTCACCAGAGAA...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR TCA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTATGTATCAGGCCTCTCTaGTGGGCAGGAAACAGCAGG +
Preference number: 2 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLCIRPL*WAGNSR
Trigger: CCTGCTGTTTCCTGCCCATCAGAGAGGCCTGATACA...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR CCA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCGGGGACTGTATCCAGTaGGTTACATGGAGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWIGDCIQ*VTWRWF
Trigger: AAACCACCTCCATGTAACCCACTGGATACAGTCCCC...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR CCA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTTGTTTCTGTTTGGCTTaGGTCAGTAATTCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFCFCLA*VSNSGS
Trigger: ACTTCCTGAATTACTGACCCAAGCCAAACAGAAACA...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR CAA 90 bp CACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTaGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTATGGA +
Preference number: 2 (lower is better)
Translates to: HNRLLTYFLEGYCFC*AWVSNSGSDVFLYG
Trigger: TCCATAAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR-3UTR GCA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTAGGATGTAAACAAACTTaGTTGTATCAGGCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLGCKQT*LYQASL
Trigger: CAGAGAGGCCTGATACAAGCAAGTTTGTTTACATCC...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR CCA 72 bp ATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTaGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCC +
Preference number: 3 (lower is better)
Translates to: IQHSKSSQVQVV*SAGQPVVRPHS
Trigger: GGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
3UTR CCA 72 bp GAGATTGCTTGGCGTGATGTGCACGAGACTGAGCAATaGCACACGGTAGGGGCAAGGAGGCCCTGTTTTCTC +
Preference number: 3 (lower is better)
Translates to: EIAWRDVHETEQ*HTVGARRPCFL
Trigger: GAGAAAACAGGGCCTCCTTGCCCCTACCGTGTGCCATTGCTCAGTCTCGTGCACATCACGCCAAGCAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463082.1
3UTR-3UTR CAA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGTGTAAACAAACTTGCTaGTATCAGGCCTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKECKQTC*YQASLM
Trigger: CATCAGAGAGGCCTGATACAAGCAAGTTTGTTTACA...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR CAA 90 bp CCTCGGGCATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTTTTTCTCGAGGGTTATaGTTTCTGTTTGGCTTGGGT +
Preference number: 3 (lower is better)
Translates to: PRALHPPVSKSASSIGWCFSRGL*FLFGLG
Trigger: ACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAA...ACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATGCCCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR-3UTR CAA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCCCACATTTTGGCATTaGCATAACTGGCAGGTGCTG +
Preference number: 3 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVPTFWH*HNWQVL
Trigger: CAGCACCTGCCAGTTATGCAAATGCCAAAATGTGGG...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR TCA 72 bp ATTCCTAATCTGCCCGGAAGTAACGCAAATGCTCTGTaGATGTTGACTCCGCTGCGGTTAGCCAGAGATTGC +
Preference number: 3 (lower is better)
Translates to: IPNLPGSNANAL*MLTPLRLARDC
Trigger: GCAATCTCTGGCTAACCGCAGCGGAGTCAACATTCACAGAGCATTTGCGTTACTTCCGGGCAGATTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
3UTR-3UTR CAA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGGGTTATTGTTTCTGTTaGGCTTGGGTCAGTAATTCA +
Preference number: 3 (lower is better)
Translates to: PPVSKSASSIGWCTCSERGYCFC*AWVSNS
Trigger: TGAATTACTGACCCAAGCCAAACAGAAACAATAACC...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp ATGCCAGGGTCTCGGCAGCCACAGTCACAGGGCAGCAGGGCAGTCCCTGGAGTGCACGAGACTGAGCAATaGCACACGGTAGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: MPGSRQPQSQGSRAVPGVHETEQ*HTVGAR
Trigger: CCTTGCCCCTACCGTGTGCCATTGCTCAGTCTCGTG...CACTCCAGGGACTGCCCTGCTGCCCTGTGACTGTGGCTGCCGAGACCCTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGCAGCGGGCTCTTTCCTaGCAGTGGGGTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKEQRALS*QWGVWR
Trigger: TCTCCAGACACCCCACTGTCAGGAAAGAGCCCGCTG...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGACTCCACGCTCTCCTTaGCGGCTGGGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGTPRSP*RLGLSP
Trigger: GGGGCTGAGGCCCAGCCGGCAAGGAGAGCGTGGAGT...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480379.5
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGGCGCCGGTCCCCAAATaGACCCGCCTCAACGATGGG +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGAPVPK*TRLNDG
Trigger: CCCATCGTTGAGGCGGGTGCATTTGGGGACCGGCGC...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp GAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGATGTTGGGGCTGGCAATTTaGGGTGGCTCAATGGGGACG +
Preference number: 4 (lower is better)
Translates to: EWGGVTEGPLTAPGHKEMLGLAI*GGSMGT
Trigger: CGTCCCCATTGAGCCACCTCAAATTGCCAGCCCCAA...CATCTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGGCCCCTCCTTCACAGTaGCTCCACGCTCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGAPPSQ*LHALLA
Trigger: GGCAAGGAGAGCGTGGAGTCACTGTGAAGGAGGGGC...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480379.5
CDS-3UTR CCA 90 bp CCTCGGGCATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTTCTCTGATGCCGACCTaGATGGGCGCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRALHPPVSKSASSIGWCSLMPT*MGAIGQ
Trigger: CTGGCCAATGGCGCCCATCCAGGTCGGCATCAGAGA...ACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATGCCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCACCTGGGTTCCAGCGCTaGCCTACGAGGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPPGFQR*PTRSWS
Trigger: AGACCAGGACCTCGTAGGCCAGCGCTGGAACCCAGG...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACGTGATGGTGATGGATaGAAACCCTCTGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRARDGDG*KPSAGA
Trigger: GGCCCCCGCAGAGGGTTTGCATCCATCACCATCACG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGAGGAGGCTCTGCTTCTaGCTCAGGTCCTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGRRLCF*LRSSFR
Trigger: GCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCT...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCCTGGATGGGCGCCATTaGCCAGAGCCGGGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVLDGRH*PEPGAP
Trigger: AGGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAG...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGTCTCTGATGCCGACCTaGATGGGCGCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGSLMPT*MGAIGQ
Trigger: CTGGCCAATGGCGCCCATCCAGGTCGGCATCAGAGA...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTTCCATCGCGGGGTGCTaGCGAGGGTGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVSIAGC*RGCCWG
Trigger: TCCCCAGCAGCACCCTCGCCAGCACCCCGCGATGGA...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGCATGTAGGGGGACCCTaGGAGTTCAAGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQHVGGP*EFKEPR
Trigger: CCTGGGCTCCTTGAACTCCCAGGGTCCCCCTACATG...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCATTGGGGCTGGCAATTTaGGGTGGCTCAATGGGGACG +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPLGLAI*GGSMGT
Trigger: CGTCCCCATTGAGCCACCTCAAATTGCCAGCCCCAA...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp GAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGATGCTCCAGCCAGGAATGTaGATGGACAGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: EWGGVTEGPLTAPGHKEMLQPGM*MDSWLA
Trigger: TGCCAACCAACTGTCCATTCACATTCCTGGCTGGAG...CATCTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAATGGGAAGGAGGCTCTaGTTCTGCCTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPMGRRL*FCLRSS
Trigger: GGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCAT...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCCCCTCTCTAATCTCTaGCTCCACCTGCACATGGCC +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGPLSNL*LHLHMA
Trigger: GGCCATGTGCAGGTGGAGGCAGAGATTAGAGAGGGG...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTCAGTTCACCTCCCTaGCCTGCTGGTGTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAVSSPP*PAGVSK
Trigger: CTTGCTGACACCAGCAGGGCAGGGAGGTGAACTGAC...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGCTGGATGGGCGCCATTaGCCAGAGCCGGGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVLDGRH*PEPGAP
Trigger: AGGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAG...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCTCCATCGCGGGGTGCTaGCGAGGGTGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVSIAGC*RGCCWG
Trigger: TCCCCAGCAGCACCCTCGCCAGCACCCCGCGATGGA...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGACATGGCCCCCAAGCTaGATTGGTGCCTGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQTWPPS*IGACVR
Trigger: ACGAACGCAGGCACCAATCCAGCTTGGGGGCCATGT...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTGTCGTCTGCATGGGTaGCCCAGTACTTGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQCRLHG*PSTCVS
Trigger: AGAGACGCAAGTACTGGGTCACCCATGCAGACGACA...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGGAATCTGGACACTGCTaGGACACCCTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGESGHC*DTLRWT
Trigger: TGTCCACCTCAGGGTGTCTCAGCAGTGTCCAGATTC...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp CCTCGGGCATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTCTTGCAGGCGTTTGCTaGGACTCAGAACAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PRALHPPVSKSASSIGWCLAGVC*DSEQSS
Trigger: CGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAG...ACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATGCCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGCCAGTAATTGCTTTTTaGAGACTTCGGCACGGAGTC +
Preference number: 4 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKEPVIAF*RLRHGV
Trigger: GACTCCGTGCCGAAGTCTTCAAAAAGCAATTACTGG...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACAAAGAGATGGGCTaGTTGTTCCACAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGHKEMG*LFHSLG
Trigger: CCCGAGGCTGTGGAACAATCAGCCCATCTCTTTGTG...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp GGCAGCCACAGTCACAGGGCAGCAGGGCAGTCCCTGGAGTGTTTCATCATCTTATGGCTAGGCTCAGAATaGGTCAGGCTTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GSHSHRAAGQSLECFIILWLGSE*VRLPPS
Trigger: GGAAGGTGGAAGCCTGACTCATTCTGAGCCTAGCCA...TAAGATGATGAAACACTCCAGGGACTGCCCTGCTGCCCTGTGACTGTGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR GCA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTTTTGGGCGGCAGCTCTaGCTCAGGTCCTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAFGRQL*LRSSLI
Trigger: GATGAGCGAGGACCTGAGGCAGAGCTGCCGCCCAAA...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCACCCTCCAGGAGCTCCTaGTTCAGGGCTTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPPSRSS*FRASLI
Trigger: AATAAGCGAAGCCCTGAAGCAGGAGCTCCTGGAGGG...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGCGCCGGTCCCCAAATaGACCCGCCTCAACGATGGG +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARAPVPK*TRLNDG
Trigger: CCCATCGTTGAGGCGGGTGCATTTGGGGACCGGCGC...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGTGCTCCATCGCGGGGTaGTGGCGAGGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVCSIAG*WRGCCW
Trigger: CCAGCAGCACCCTCGCCAGCACCCCGCGATGGAGCA...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAAGGGCTCAGGTGTGGTaGGGTCCTCACTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPRAQVW*GPHSSY
Trigger: GTAAGAAGAGTGAGGACCCCACCACACCTGAGCCCT...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGTCCATCGCGGGGTGCTaGCGAGGGTGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGSIAGC*RGCCWG
Trigger: TCCCCAGCAGCACCCTCGCCAGCACCCCGCGATGGA...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCATCTTGCTGGTGCGGATaGGAAGGAGGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPSCWCG*EGGSAS
Trigger: AGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGA...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTGTGTCCCGTGGTGTCTaGCATCCTCTGTGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAVSRGV*HPLCPS
Trigger: CGAGGGACACAGAGGATGCCAGACACCACGGGACAC...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACTCCAGCCAGGAATGTaGATGGACAGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRALQPGM*MDSWLA
Trigger: TGCCAACCAACTGTCCATTCACATTCCTGGCTGGAG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
CDS-3UTR TCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCTTGCAGGCGTTTGCTaGGACTCAGAACAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGLAGVC*DSEQSS
Trigger: CGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAG...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCCTCCAACATCCAACTaGAAGCCAAGGCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGPPTSN*KPRLVC
Trigger: GCAAACCAGCCTTGGCTTTCAGTTGGATGTTGGAGG...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp GTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAATGCTCCATCGCGGGGTaGTGGCGAGGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VVRPHSFEGAGPVIARGKCSIAG*WRGCCW
Trigger: CCAGCAGCACCCTCGCCAGCACCCCGCGATGGAGCA...TTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCATCTCCCAGCCGGTCCTaGCAAACCTTCTTGACATTG +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPSPSRS*QTFLTL
Trigger: CAATGTCAAGAAGGTTTGGCAGGACCGGCTGGGAGA...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACACCCGCCTCAACGATaGGGTTTCCTTCAAGTGACT +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAHPPQR*GFLQVT
Trigger: AGTCACTTGAAGGAAACCCCATCGTTGAGGCGGGTG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp TGTGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCGAATGGACAGTTGGTTaGCATGATCGCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: CGQQGSLWLDRIPLKELVEWTVG*HDRWRD
Trigger: GTCACGCCAGCGATCATGCCAACCAACTGTCCATTC...GACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGGAATGGACAGTTGGTTaGCATGATCGCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQEWTVG*HDRWRD
Trigger: GTCACGCCAGCGATCATGCCAACCAACTGTCCATTC...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGCAGACAGTCATCGCTTaGAGAGCTATCCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQQTVIA*RAIPNG
Trigger: CCCATTGGGGATAGCTCTCCAAGCGATGACTGTCTG...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACAGACAGTCATCGCTTaGAGAGCTATCCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAQTVIA*RAIPNG
Trigger: CCCATTGGGGATAGCTCTCCAAGCGATGACTGTCTG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGACTCCTTCCCAGTTCTaGAGGCCAGAAATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQTPSQF*RPEIQV
Trigger: CACCTGGATTTCTGGCCTCCAGAACTGGGAAGGAGT...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp GATGCCAGGGTCTCGGCAGCCACAGTCACAGGGCAGCAGGGCAGTCCCTGGAGTCAATCATCTGGGAGATaGCTATGGATGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: DARVSAATVTGQQGSPWSQSSGR*LWMKSF
Trigger: AAATGATTTCATCCATAGTCATCTCCCAGATGATTG...ACTCCAGGGACTGCCCTGCTGCCCTGTGACTGTGGCTGCCGAGACCCTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGACAGCGGGCTCTTTCCTaGCAGTGGGGTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARQRALS*QWGVWR
Trigger: TCTCCAGACACCCCACTGTCAGGAAAGAGCCCGCTG...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTGAATCTGGACACTGCTaGGACACCCTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAESGHC*DTLRWT
Trigger: TGTCCACCTCAGGGTGTCTCAGCAGTGTCCAGATTC...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCCCATCCCTGGATCCTaGGCGTCTCTGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSPIPGS*ASLQPQ
Trigger: CTGCGGCTGCAGAGACGCTCAGGATCCAGGGATGGG...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480379.5
CDS-3UTR GCA 90 bp CAGCCACAGTCACAGGGCAGCAGGGCAGTCCCTGGAGTGTTTCATCATCTTATGTTGCTTGGCGTGATGTaGACGAGACTGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: QPQSQGSRAVPGVFHHLMLLGVM*TRLSNG
Trigger: GCCATTGCTCAGTCTCGTGCACATCACGCCAAGCAA...CATAAGATGATGAAACACTCCAGGGACTGCCCTGCTGCCCTGTGACTGTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR GCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCCGTGATGGTGATGGATaGAAACCCTCTGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVRDGDG*KPSAGA
Trigger: GGCCCCCGCAGAGGGTTTGCATCCATCACCATCACG...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGCTCCTTTGGGGAACTTaGTTTCTATCTGAACACCAT +
Preference number: 4 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKELLWGT*FLSEHH
Trigger: ATGGTGTTCAGATAGAAAGCAAGTTCCCCAAAGGAG...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCACAGCCTCGGGCATTaGACCCACCGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVHSLGH*THRFPS
Trigger: ACTTGGAAACCGGTGGGTGCAATGCCCGAGGCTGTG...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGACCCAAGCTGGATTGGTaGCTGCGTTCGTTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARPKLDW*LRSFPA
Trigger: CGCTGGGAACGAACGCAGGCACCAATCCAGCTTGGG...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGCTGAGACAAAGGCTCTaGTCCATTGCGTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQLRQRL*SIASVH
Trigger: GTGAACTGACGCAATGGAGCAGAGCCTTTGTCTCAG...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGCTCAGCCCCCAGCCGTaGTCCTCTCCCATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVLSPQP*SSPICP
Trigger: AGGACAGATGGGAGAGGAGCACGGCTGGGGGCTGAG...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480379.5
CDS-3UTR CCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCCACGAGACTGAGCAATaGCACACGGTAGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSHETEQ*HTVGAR
Trigger: CCTTGCCCCTACCGTGTGCCATTGCTCAGTCTCGTG...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAAAGAGCCGGGGGCGCCTaGAACAGTGTGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKRAGGA*NSVSSA
Trigger: GGCTGAGGACACACTGTTCCAGGCGCCCCCGGCTCT...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTGGGCTTTCCTCTGCTaGACCATGTGTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQWAFLC*TMCSSF
Trigger: GAAGCTTGAACACATGGTCCAGCAGAGGAAAGCCCA...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAATCCAGTGGGTTACATaGAGGTGGTTTCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAIQWVT*RWFPHN
Trigger: GTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGATCCAGTGGGTTACATaGAGGTGGTTTCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQIQWVT*RWFPHN
Trigger: GTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACAGGTCACAAAGAGATaGGCTGATTGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAQVTKR*ADCSTA
Trigger: GGCTGTGGAACAATCAGCCCATCTCTTTGTGACCTG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp AAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTTCTCTGGTGAGGAATaGGGCGGGGTGACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KGTVSSGLHGGGFPTTDCFSGEE*GGVTEG
Trigger: GCCCTCAGTCACCCCGCCCCATTCCTCACCAGAGAA...ACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCCGCTGCTACCCCACATaGCCCCCAAGCTGGATTGGT +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVRCYPT*PPSWIG
Trigger: ACCAATCCAGCTTGGGGGCCATGTGGGGTAGCAGCG...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356858.7
3UTR CAA 72 bp TCTGTGAATGTTGACTCCGCTGCGGTTAGCCAGAGATaGCTTGGCGTGATGTGCACGAGACTGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SVNVDSAAVSQR*LGVMCTRLSNG
Trigger: GCCATTGCTCAGTCTCGTGCACATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAACATTCACAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp TCTGTGAATGTTGACTCCGCTGCGGTTAGCCAGAGATTGCTTGGCGTGATGTGCAACGCAAATGCTCTGTaGATGTTGACTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SVNVDSAAVSQRLLGVMCNANAL*MLTPLR
Trigger: CCGCAGCGGAGTCAACATTCACAGAGCATTTGCGTT...GCACATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAACATTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGGGGTTTCCTTCAAGTaGCTTTCTTGTAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAGVSFK*LSCKPG
Trigger: CCCAGGTTTACAAGAAAGTCACTTGAAGGAAACCCC...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGGAGCGAGAAATGAACTaGGGCTTACGAACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGEREMN*GLRTSS
Trigger: ACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTC...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGGAGGATGGGGAATCGTaGACTGCTTCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PPVSKSASSIGWCTCSEREDGES*TASCWC
Trigger: GCACCAGCAAGAAGCAGTTCACGATTCCCCATCCTC...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTTTGCTTGGCGTGATGTaGACGAGACTGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIALLGVM*TRLSNG
Trigger: GCCATTGCTCAGTCTCGTGCACATCACGCCAAGCAA...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGCCCTCCAGGAGCTCCTaGTTCAGGGCTTCGCTTATT +
Preference number: 4 (lower is better)
Translates to: PPVSKSASSIGWCTCSERPSRSS*FRASLI
Trigger: AATAAGCGAAGCCCTGAAGCAGGAGCTCCTGGAGGG...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGGTTAGCTCCCACATTTaGCAATTCTGTGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKEVSSHI*QFCVFQ
Trigger: TTGGAAAACACAGAATTGGCAAATGTGGGAGCTAAC...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGTACTTTTGTGTGTACTaGCCTGTAACTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGYFCVY*PVTPAR
Trigger: CCTGGCTGGAGTTACAGGGCAGTACACACAAAAGTA...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGCTCCATCGCGGGGTaGTGGCGAGGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLACSIAG*WRGCCW
Trigger: CCAGCAGCACCCTCGCCAGCACCCCGCGATGGAGCA...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGCAAGGTCAAAGATCTTaGAGGCGTTTGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQQGQRS*RRLLRL
Trigger: GAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTG...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAAGGTCAAAGATCTTaGAGGCGTTTGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGQGQRS*RRLLRL
Trigger: GAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTG...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACAAGGTCAAAGATCTTaGAGGCGTTTGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAQGQRS*RRLLRL
Trigger: GAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCACTGCTTCTTGCTGGTaGGGATGGGAAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSTASCW*GWEGGS
Trigger: AGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGT...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTTGGGGAATCGTGAACTaGTTCTTGCTGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAWGIVN*FLLVRM
Trigger: CATCCGCACCAGCAAGAAGCAGTTCACGATTCCCCA...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGATCCTTAAACCCAGCCTaGTTCCCACAGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGSLNPA*FPQGLA
Trigger: AGCCAGCCCCTGTGGGAAGCAGGCTGGGTTTAAGGA...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGATCCTGAGCGTCTCTaGAGCCGCAGCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSDPERL*SRSPSF
Trigger: GAAGGAGGGGCTGCGGCTGCAGAGACGCTCAGGATC...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480379.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGAGCCGGGGGCGCCTaGAACAGTGTGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSRAGGA*NSVSSA
Trigger: GGCTGAGGACACACTGTTCCAGGCGCCCCCGGCTCT...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGTCTGCTGTTAATCTGTaGGAACTACAATTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKESAVNL*ELQLRL
Trigger: CAACCTCAATTGTAGTTCCCACAGATTAACAGCAGA...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGCAGGGCAGCCTGTaGTTAGACCGCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVQQGSL*LDRIPL
Trigger: CAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTG...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTGGGTTACATGGAGGTaGTTTCCCCACAACAGATTG +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQWVTWR*FPHNRL
Trigger: CAATCTGTTGTGGGGAAACCACCTCCATGTAACCCA...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGCCCCCAAGCTGGATTaGTGCCTGCGTTCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVAPKLD*CLRSFP
Trigger: TGGGAACGAACGCAGGCACCAATCCAGCTTGGGGGC...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp GTTGACTCCGCTGCGGTTAGCCAGAGATTGCTTGGCGTGATGTGCACGAGACTGCAGCAGGGCAGTCCCTaGAGTGTTTCATCATCTTAT +
Preference number: 4 (lower is better)
Translates to: VDSAAVSQRLLGVMCTRLQQGSP*SVSSSY
Trigger: ATAAGATGATGAAACACTCCAGGGACTGCCCTGCTG...CAGTCTCGTGCACATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACTTGTGAGCGAGAAATaGACTGAGGCTTACGAACTT +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRALVSEK*TEAYEL
Trigger: AAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTTGACTCCGCTGCGGTTAGCCAGAGATTGCTTGGCGTGATGTGCACGAGACTGAGCTCTAAACCTTGGTaGAGTCAGATTTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VDSAAVSQRLLGVMCTRLSSKPW*SQILPL
Trigger: CAGAGGCAAAATCTGACTTCACCAAGGTTTAGAGCT...CAGTCTCGTGCACATCACGCCAAGCAATCTCTGGCTAACCGCAGCGGAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR GCA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTTTTGGGCGGCAGCTCTaGCTCAGGTCCTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSFGRQL*LRSSLI
Trigger: GATGAGCGAGGACCTGAGGCAGAGCTGCCGCCCAAA...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGCGCTGGGCTTTCCTCTaGTGGACCATGTGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQRWAFL*WTMCSS
Trigger: GCTTGAACACATGGTCCAGCAGAGGAAAGCCCAGCG...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTAGGAGGCTCTGCTTCTaGCTCAGGTCCTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSRRLCF*LRSSFR
Trigger: GCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCT...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAACTGCTTCTTGCTGGTaGGGATGGGAAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARTASCW*GWEGGS
Trigger: AGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGT...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGGGAGGACCCTTCCTTaGCCTTCTCAGTGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSGRTLP*PSQCPV
Trigger: CACGGGACACTGAGAAGGGCAAGGAAGGGTCCTCCC...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCGAAGTCCCGATCCGCTaGTACCCCACATGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSEVPIR*YPTWPP
Trigger: TGGGGGCCATGTGGGGTAGCAGCGGATCGGGACTTC...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGGCATGTGTAATCTCCTaGCCTGTAACTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPVSKSASSIGWCTCSERACVIS*PVTPAR
Trigger: CCTGGCTGGAGTTACAGGGCAGGAGATTACACATGC...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424927.5
CDS-3UTR CCA 90 bp TTTGTGATGCCAGGGTCTCGGCAGCCACAGTCACAGGGCAGCAGGGCAGTCCCTTCTGTGACATCAGACTaGAGATTTTTAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: FVMPGSRQPQSQGSRAVPSVTSD*RFLRAI
Trigger: AATTGCCCTTAAAAATCTCCAGTCTGATGTCACAGA...AGGGACTGCCCTGCTGCCCTGTGACTGTGGCTGCCGAGACCCTGGCATCACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR CCA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGAGGGTCTCTCCTCTTTaGGCGGCAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRRVSPL*AAALPQ
Trigger: CTGAGGCAGAGCTGCCGCCCAAAGAGGAGAGACCCT...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGGGCTCAGGTGTGGTaGGGTCCTCACTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVRAQVW*GPHSSY
Trigger: GTAAGAAGAGTGAGGACCCCACCACACCTGAGCCCT...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTTATCACTCAGAGGATaGGGAATCGTGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQLSLRG*GIVNCF
Trigger: GAAGCAGTTCACGATTCCCCATCCTCTGAGTGATAA...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTTTCTCTGGTGAGGAATaGGGCGGGGTGACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSFSGEE*GGVTEG
Trigger: GCCCTCAGTCACCCCGCCCCATTCCTCACCAGAGAA...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp GCAGGGCAGTCCCTGGAGTGTTTCATCATCTTATGGCAGCCTTCTAGCGCACGCCTTCTCCAGACAGTTTaGGCATATTCTACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AGQSLECFIILWQPSSARLLQTV*AYSTEV
Trigger: AACCTCAGTAGAATATGCTCAAACTGTCTGGAGAAG...GCGTGCGCTAGAAGGCTGCCATAAGATGATGAAACACTCCAGGGACTGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGACCAGGGTCTCCTTGGTaGAGTCAGATTTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARPGSPW*SQILPL
Trigger: CAGAGGCAAAATCTGACTTCACCAAGGAGACCCTGG...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAAGGTGGACACAGGAACTaGACACCAGCGGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKGGHRN*TPAGSF
Trigger: GAAAGAGCCCGCTGGTGTTCAGTTCCTGTGTCCACC...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGACTTGCAGGCGTTTGCTaGGACTCAGAACAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGLAGVC*DSEQSS
Trigger: CGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAG...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCCTTCAGCCGTTCTTGTaGGCGAGAAATGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSLQPFL*ARNELR
Trigger: CCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAG...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGGAGGATGGGGAATCGTaGACTGCTTCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGEDGES*TASCWC
Trigger: GCACCAGCAAGAAGCAGTTCACGATTCCCCATCCTC...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTATGCATCTCCTTCTCTaGAATGCACCGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAMHLLL*NAPFFG
Trigger: CCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCAT...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTTGCTTGGCGTGATGTaGACGAGACTGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGLLGVM*TRLSNG
Trigger: GCCATTGCTCAGTCTCGTGCACATCACGCCAAGCAA...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCCGGGATTCCTAATCTaGCCGGAAGTAACGCAAATG +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVPGFLI*PEVTQM
Trigger: CATTTGCGTTACTTCCGGGCAGATTAGGAATCCCGG...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGTGTCCTCAGCCCTaGACTTGGGGCACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSVCPQP*TWGTES
Trigger: ACTCTCTGTGCCCCAAGTGCAGGGCTGAGGACACAC...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTTCTGGAGAACTCTGTaGAGGCAAAAGATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQFWRTL*RQKISD
Trigger: ATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAA...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCATTCTGGAGAACTCTGTaGAGGCAAAAGATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPFWRTL*RQKISD
Trigger: ATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAA...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGGGTCTCTTTGTCGTCTaGATGGGTGACCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: PPVSKSASSIGWCTCSERGLFVV*MGDPVL
Trigger: AAGTACTGGGTCACCCATGCAGACGACAAAGAGACC...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGAGGCTCTGCTTCTaGCTCAGGTCCTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSRRLCF*LRSSFR
Trigger: GCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCT...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAGATGACCGTGAGTGCTaGCTTCACCTTTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGDDREC*LHLFPT
Trigger: AGTGGGGAAAAGGTGAAGGCAGCACTCACGGTCATC...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGACTTGATGACCGTGAGTaGTGCCTTCACCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGLDDRE*CLHLFP
Trigger: GGGGAAAAGGTGAAGGCAGCACTCACGGTCATCAAG...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAATTCACCTCCCTGCCCTaGTGGTGTCAGCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKFTSLP*WCQQGH
Trigger: GTGACCTTGCTGACACCAGCAGGGCAGGGAGGTGAA...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAGGCTCTGCTCCATTaGGTCAGTTCACCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGKALLH*VSSPPC
Trigger: GCAGGGAGGTGAACTGACGCAATGGAGCAGAGCCTT...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTCACACAACCCAGTGTaGGCCTCGGGAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRSHNPV*ASGTFS
Trigger: GCTGAAGGTTCCCGAGGCCCACACTGGGTTGTGTGA...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTTTTGAGGTGGCTCAATaGGGACGGAGAGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVFEVAQ*GRRETC
Trigger: ACAAGTCTCTCTCCGTCCCCATTGAGCCACCTCAAA...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTCCTGGGTTCCAGCGCTaGCCTACGAGGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAPGFQR*PTRSWS
Trigger: AGACCAGGACCTCGTAGGCCAGCGCTGGAACCCAGG...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTGAATGGACAGTTGGTTaGCATGATCGCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGEWTVG*HDRWRD
Trigger: GTCACGCCAGCGATCATGCCAACCAACTGTCCATTC...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTTCCATCGCGGGGTGCTaGCGAGGGTGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFSIAGC*RGCCWG
Trigger: TCCCCAGCAGCACCCTCGCCAGCACCCCGCGATGGA...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTGGGGACTGTATCCAGTaGGTTACATGGAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVGDCIQ*VTWRWF
Trigger: AAACCACCTCCATGTAACCCACTGGATACAGTCCCC...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGCTGTGTCCCTCGGCTTaGGACAGCCCCTCTCTAATC +
Preference number: 4 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRLCPSA*DSPSLI
Trigger: GATTAGAGAGGGGCTGTCCCAAGCCGAGGGACACAG...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGACCTCCCTGCCCTGCTaGTGTCAGCAAGGTCACAAT +
Preference number: 4 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGTSLPC*CQQGHN
Trigger: ATTGTGACCTTGCTGACACCAGCAGGGCAGGGAGGT...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CTGGAGTGTTTCATCATCTTATGGCAGCCTTCTAGCGCACGCCCAGGGACAAGCCAGATTTTGCCTCTGTaGCATCAGACTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: LECFIILWQPSSARPGTSQILPL*HQTGDF
Trigger: AAAATCTCCAGTCTGATGTCACAGAGGCAAAATCTG...GCTTGTCCCTGGGCGTGCGCTAGAAGGCTGCCATAAGATGATGAAACACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR TCA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTTGTCGTCTGCATGGGTaGCCCAGTACTTGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSCRLHG*PSTCVS
Trigger: AGAGACGCAAGTACTGGGTCACCCATGCAGACGACA...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCGGGGTTTCCTTCAAGTaGCTTTCTTGTAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSGVSFK*LSCKPG
Trigger: CCCAGGTTTACAAGAAAGTCACTTGAAGGAAACCCC...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCCTTCAGCCGTTCTTGTaGGCGAGAAATGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVLQPFL*ARNELR
Trigger: CCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAG...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTGAGGATGGGGAATCGTaGACTGCTTCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSEDGES*TASCWC
Trigger: GCACCAGCAAGAAGCAGTTCACGATTCCCCATCCTC...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAACTAACTCCTCACCCGTaGCACGGCTCAAGATCGCTT +
Preference number: 4 (lower is better)
Translates to: VVRPHSFEGAGPVIARGKLTPHP*HGSRSL
Trigger: AAGCGATCTTGAGCCGTGTCACGGGTGAGGAGTTAG...TTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGACCTGCCAAACCTTCTTaGCATTGCCAGTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGPAKPS*HCQFVT
Trigger: GGTCACAAACTGGCAATGTCAAGAAGGTTTGGCAGG...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAAAGGCTGGTTTGCTCCTaGGACAAAGGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKRLVCS*DKGSAP
Trigger: TGGAGCAGAGCCTTTGTCTCAGGAGCAAACCAGCCT...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAGGCCATTACCTTTTTaGAGACTTCGGCACGGAGTC +
Preference number: 4 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGRPLPF*RLRHGV
Trigger: GACTCCGTGCCGAAGTCTTCAAAAAGGTAATGGCCT...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp TATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTGTGTGTCCTCAGCCCTaGACTTGGGGCACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: YPVGYMEVVSPQQIVDLFVCPQP*TWGTES
Trigger: ACTCTCTGTGCCCCAAGTGCAGGGCTGAGGACACAC...AAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGTCTCTTTGTCGTCTaGATGGGTGACCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARGLFVV*MGDPVL
Trigger: AAGTACTGGGTCACCCATGCAGACGACAAAGAGACC...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCTTGTTGCCTCTTGCTaGTTCCAGAAAATACTTTTG +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGLVASC*FQKILL
Trigger: CAAAAGTATTTTCTGGAAGCAGCAAGAGGCAACAAG...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp GTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTTGCTCCATCGCGGGGTaGTGGCGAGGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VIVSVWLGSVIQEVMFSFCSIAG*WRGCCW
Trigger: CCAGCAGCACCCTCGCCAGCACCCCGCGATGGAGCA...AAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGCTCTTAGATCGCATATaGATCTCCTTCTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQLLDRI*ISFSEM
Trigger: CATTTCAGAGAAGGAGATGCATATGCGATCTAAGAG...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCACTCTTAGATCGCATATaGATCTCCTTCTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRALLDRI*ISFSEM
Trigger: CATTTCAGAGAAGGAGATGCATATGCGATCTAAGAG...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp TGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTCACACAACCCAGTGTaGGCCTCGGGAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WRWFPHNRLLTYFLEGYCSHNPV*ASGTFS
Trigger: GCTGAAGGTTCCCGAGGCCCACACTGGGTTGTGTGA...ACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGATTTGAGGTGGCTCAATaGGGACGGAGAGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARFEVAQ*GRRETC
Trigger: ACAAGTCTCTCTCCGTCCCCATTGAGCCACCTCAAA...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTTCTTGCTGGTGCGGATaGGAAGGAGGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSSCWCG*EGGSAS
Trigger: AGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGA...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCTGGGTTACATGGAGGTaGTTTCCCCACAACAGATTG +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSWVTWR*FPHNRL
Trigger: CAATCTGTTGTGGGGAAACCACCTCCATGTAACCCA...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGGGGGACTGTATCCAGTaGGTTACATGGAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQGDCIQ*VTWRWF
Trigger: AAACCACCTCCATGTAACCCACTGGATACAGTCCCC...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAAACGCAAATGCTCTGTaGATGTTGACTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VVRPHSFEGAGPVIARGKNANAL*MLTPLR
Trigger: CCGCAGCGGAGTCAACATTCACAGAGCATTTGCGTT...TTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTCTCCAGCCAGGAATGTaGATGGACAGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSLQPGM*MDSWLA
Trigger: TGCCAACCAACTGTCCATTCACATTCCTGGCTGGAG...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
CDS-3UTR TCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTCCAGTAATTGCTTTTTaGAGACTTCGGCACGGAGTC +
Preference number: 4 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGPVIAF*RLRHGV
Trigger: GACTCCGTGCCGAAGTCTTCAAAAAGCAATTACTGG...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTTGTATCAGGCCTCTCTaGTGGGCAGGAAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFCIRPL*WAGNSR
Trigger: CCTGCTGTTTCCTGCCCATCAGAGAGGCCTGATACA...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp TGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTCGCTGGGCTTTCCTCTaGTGGACCATGTGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: WRWFPHNRLLTYFLEGYCRWAFL*WTMCSS
Trigger: GCTTGAACACATGGTCCAGCAGAGGAAAGCCCAGCG...ACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGTTCTCATCAATCATCTaGGAGATGACTATGGATGAA +
Preference number: 4 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGFSSII*EMTMDE
Trigger: TTCATCCATAGTCATCTCCCAGATGATTGATGAGAA...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTAGGGTCTCTCCTCTTTaGGCGGCAGCTCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGRVSPL*AAALPQ
Trigger: CTGAGGCAGAGCTGCCGCCCAAAGAGGAGAGACCCT...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp GTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAACCACGGAGCTGTTTCTaGAGAACTCTGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VVRPHSFEGAGPVIARGKPRSCF*RTLCRQ
Trigger: TTGCCTGCACAGAGTTCTCCAGAAACAGCTCCGTGG...TTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGCGGATCTGTGCATTTTaGGGCTGGCAATTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVRICAF*GWQFEV
Trigger: CACCTCAAATTGCCAGCCCCAAAATGCACAGATCCG...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp AAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTGGTTGGCATGATCGCTaGCGTGACAATGAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: KGTVSSGLHGGGFPTTDCGWHDR*RDNELY
Trigger: ATACAACTCATTGTCACGCCAGCGATCATGCCAACC...ACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGGGCTTCTGTTCCACTaGAGGAGCAGACACAGTCAT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSGLLFH*RSRHSH
Trigger: ATGACTGTGTCTGCTCCTCCAGTGGAACAGAAGCCC...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTTCTTGCTGGTGCGGATaGGAAGGAGGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFSCWCG*EGGSAS
Trigger: AGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGA...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCAGCAGGGCAGCCTGTaGTTAGACCGCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSQQGSL*LDRIPL
Trigger: CAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTG...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCGCCTCTAGCATTGGGTaGTGTACATGTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVASSIG*CTCSER
Trigger: CCTTTCTGAACATGTACACCACCCAATGCTAGAGGC...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTGCTTCCCACAGGGGCTaGCTTGATGACCGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGASHRG*LDDREC
Trigger: GCACTCACGGTCATCAAGCCAGCCCCTGTGGGAAGC...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAACTGAAAGCCAAGGCTaGTTTGCTCCTGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARTESQG*FAPETK
Trigger: CTTTGTCTCAGGAGCAAACCAGCCTTGGCTTTCAGT...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCCAGATTTTGCCTCTGTaGCATCAGACTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSQILPL*HQTGDF
Trigger: AAAATCTCCAGTCTGATGTCACAGAGGCAAAATCTG...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCAGGCAAAAGATCTCTaGTGCCGACCTGGATGGGCG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGQAKDL*CRPGWA
Trigger: CGCCCATCCAGGTCGGCATCAGAGATCTTTTGCCTG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCGGTTTCAGGAAGCTTTaGTGTCGTCTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSGFRKL*CRLSVG
Trigger: GCCCACAGAGAGACGACATCAAAGCTTCCTGAAACC...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR TCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTCTTCAGCCGTTCTTGTaGGCGAGAAATGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSLQPFL*ARNELR
Trigger: CCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAG...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGCCCACAACAGATTGTTaGCCTATTTTCTCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQPTTDC*PIFSRV
Trigger: AACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGG...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGCACAAAGAGATGGGCTaGTTGTTCCACAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VVSPQQIVDLFSRGLLFLHKEMG*LFHSLG
Trigger: CCCGAGGCTGTGGAACAATCAGCCCATCTCTTTGTG...CAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAATTCCCAGCGCTGCTGTaGAAAGTGACTACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKFPALL*KVTTKG
Trigger: TCCCTTTGTAGTCACTTTTCACAGCAGCGCTGGGAA...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAACCGGGATTCCTAATCTaGCCGGAAGTAACGCAAATG +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKPGFLI*PEVTQM
Trigger: CATTTGCGTTACTTCCGGGCAGATTAGGAATCCCGG...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGACAGGACGGATCTGTaGATTTTGGGGCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSDRTDL*ILGLAI
Trigger: AATTGCCAGCCCCAAAATGCACAGATCCGTCCTGTC...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTACTTCCAGTGCTTCTTaGAAGGTCAAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVTSSAS*KVKDLA
Trigger: TGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGT...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCACTTCCAGTGCTTCTTaGAAGGTCAAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSTSSAS*KVKDLA
Trigger: TGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGT...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp AACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCATGGGAAGGAGGCTCTaGTTCTGCCTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NRLLTYFLEGYCFCLAWVMGRRL*FCLRSS
Trigger: GGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCAT...GACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp TTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATATGGGAAGGAGGCTCTaGTTCTGCCTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLEGYCFCLAWVSNSGSDMGRRL*FCLRSS
Trigger: GGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCAT...ATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTTGGGGAATCGTGAACTaGTTCTTGCTGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFWGIVN*FLLVRM
Trigger: CATCCGCACCAGCAAGAAGCAGTTCACGATTCCCCA...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGAGATTCGGCATCTGTaGACCACACACATCACACCT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSEIRHL*TTHITP
Trigger: AGGTGTGATGTGTGTGGTGCACAGATGCCGAATCTC...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp TTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATCACGAGACTGAGCAATaGCACACGGTAGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FLEGYCFCLAWVSNSGSDHETEQ*HTVGAR
Trigger: CCTTGCCCCTACCGTGTGCCATTGCTCAGTCTCGTG...ATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTAGGGCTCAGGTGTGGTaGGGTCCTCACTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LEGYCFCLAWVSNSGSDVRAQVW*GPHSSY
Trigger: GTAAGAAGAGTGAGGACCCCACCACACCTGAGCCCT...AACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGACCGTGAAGGCCACATaGTCCTCCAAAACTCAAATG +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVTVKAT*SSKTQM
Trigger: CATTTGAGTTTTGGAGGACCATGTGGCCTTCACGGT...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTCTTCTCCAGACAGTTTaGGCATATTCTACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGLLQTV*AYSTEV
Trigger: AACCTCAGTAGAATATGCTCAAACTGTCTGGAGAAG...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTCCAGGGTCTCCTTGGTaGAGTCAGATTTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAPGSPW*SQILPL
Trigger: CAGAGGCAAAATCTGACTTCACCAAGGAGACCCTGG...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCGGTGGACACAGGAACTaGACACCAGCGGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWIGGHRN*TPAGSF
Trigger: GAAAGAGCCCGCTGGTGTTCAGTTCCTGTGTCCACC...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGGTCTACGTAATAGATTaGATCTGGACACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQVYVID*IWTLLR
Trigger: TCTCAGCAGTGTCCAGATTCAATCTATTACGTAGAC...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGCTTGTGAGCGAGAAATaGACTGAGGCTTACGAACTT +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVLVSEK*TEAYEL
Trigger: AAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAG...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTGAGGATGGGGAATCGTaGACTGCTTCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGEDGES*TASCWC
Trigger: GCACCAGCAAGAAGCAGTTCACGATTCCCCATCCTC...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTATGCATCTCCTTCTCTaGAATGCACCGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSMHLLL*NAPFFG
Trigger: CCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCAT...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTTATTGTAGAAAACACTaGAGTTACGTCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLALGGVHVYCRKH*SYVRAS
Trigger: GGAAGCTCTGACGTAACTTCAGTGTTTTCTACAATA...AACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCATCACACCTGCTGGTaGCGAGGCCATTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSHHTCW*RGHYLF
Trigger: AAAAAGGTAATGGCCTCGTCACCAGCAGGTGTGATG...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGACAAAGATGTCAAGTTaGGATTCGGCATCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVTKMSS*DSASVH
Trigger: GTGCACAGATGCCGAATCTCAACTTGACATCTTTGT...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGCTTGTTGCCTCTTGCTaGTTCCAGAAAATACTTTTG +
Preference number: 4 (lower is better)
Translates to: PPVSKSASSIGWCTCSERLVASC*FQKILL
Trigger: CAAAAGTATTTTCTGGAAGCAGCAAGAGGCAACAAG...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGACTTCCAGTGCTTCTTaGAAGGTCAAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQTSSAS*KVKDLA
Trigger: TGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGT...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCGCTGGGCTTTCCTCTaGTGGACCATGTGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGRWAFL*WTMCSS
Trigger: GCTTGAACACATGGTCCAGCAGAGGAAAGCCCAGCG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp GTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTAGGAGGCTCTGCTTCTaGCTCAGGTCCTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: VIVSVWLGSVIQEVMFSFRRLCF*LRSSFR
Trigger: GCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCT...AAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp CTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTGGGGAATCGTGAACTaGTTCTTGCTGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: LEGYCFCLAWVSNSGSDVWGIVN*FLLVRM
Trigger: CATCCGCACCAGCAAGAAGCAGTTCACGATTCCCCA...AACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTGGATGTAAACAAACTTaGTTGTATCAGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGGCKQT*LYQASL
Trigger: CAGAGAGGCCTGATACAAGCAAGTTTGTTTACATCC...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTCACAGCCTCGGGCATTaGACCCACCGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFHSLGH*THRFPS
Trigger: ACTTGGAAACCGGTGGGTGCAATGCCCGAGGCTGTG...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTCACCCGCCTCAACGATaGGGTTTCCTTCAAGTGACT +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAHPPQR*GFLQVT
Trigger: AGTCACTTGAAGGAAACCCCATCGTTGAGGCGGGTG...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTTCAAATATGGGCTTCTGTTCCACTaGAGGAGCAGACACAGTCAT +
Preference number: 4 (lower is better)
Translates to: PSQPLALGGVHVQKGFKYGLLFH*RSRHSH
Trigger: ATGACTGTGTCTGCTCCTCCAGTGGAACAGAAGCCC...ATATTTGAAACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCTGGGCTTTCCTCTGCTaGACCATGTGTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSWAFLC*TMCSSF
Trigger: GAAGCTTGAACACATGGTCCAGCAGAGGAAAGCCCA...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCAGCAGGGCAGCCTGTaGTTAGACCGCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGQQGSL*LDRIPL
Trigger: CAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTGGGGACTGTATCCAGTaGGTTACATGGAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFGDCIQ*VTWRWF
Trigger: AAACCACCTCCATGTAACCCACTGGATACAGTCCCC...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTGGCATTTGCATAACTaGCAGGTGCTGAGATTGAAA +
Preference number: 4 (lower is better)
Translates to: HRFPSQPLALGGVHVQKGWHLHN*QVLRLK
Trigger: TTTCAATCTCAGCACCTGCCAGTTATGCAAATGCCA...ACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCAGGTCACAAAGAGATaGGCTGATTGTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSQVTKR*ADCSTA
Trigger: GGCTGTGGAACAATCAGCCCATCTCTTTGTGACCTG...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp CCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGAACGCAAATGCTCTGTaGATGTTGACTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQQIVDLFSRGLLFLFGLNANAL*MLTPLR
Trigger: CCGCAGCGGAGTCAACATTCACAGAGCATTTGCGTT...CAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp GTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTCAGGCAAAAGATCTCTaGTGCCGACCTGGATGGGCG +
Preference number: 4 (lower is better)
Translates to: VIVSVWLGSVIQEVMFSFQAKDL*CRPGWA
Trigger: CGCCCATCCAGGTCGGCATCAGAGATCTTTTGCCTG...AAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGGTCTACGTAATAGATTaGATCTGGACACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGVYVID*IWTLLR
Trigger: TCTCAGCAGTGTCCAGATTCAATCTATTACGTAGAC...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp TTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGGTTTCAGGAAGCTTTaGTGTCGTCTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLEGYCFCLAWVSNSGSDGFRKL*CRLSVG
Trigger: GCCCACAGAGAGACGACATCAAAGCTTCCTGAAACC...ATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR TCA 90 bp TGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTGAGCGAGAAATGAACTaGGGCTTACGAACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WRWFPHNRLLTYFLEGYCEREMN*GLRTSS
Trigger: ACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTC...ACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTCTTGTGAGCGAGAAATaGACTGAGGCTTACGAACTT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSLVSEK*TEAYEL
Trigger: AAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAG...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCATGCATCTCCTTCTCTaGAATGCACCGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSMHLLL*NAPFFG
Trigger: CCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCAT...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGCCCACAACAGATTGTTaGCCTATTTTCTCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRPTTDC*PIFSRV
Trigger: AACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGG...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCGCTGCTGTGAAAAGTaGCTACAAAGGGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGRCCEK*LQREQL
Trigger: CAGCTGCTCCCTTTGTAGTCACTTTTCACAGCAGCG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCGTTAGCTCCCACATTTaGCAATTCTGTGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVVSSHI*QFCVFQ
Trigger: TTGGAAAACACAGAATTGGCAAATGTGGGAGCTAAC...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
CDS-3UTR GCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTCGCTGGGCTTTCCTCTaGTGGACCATGTGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFRWAFL*WTMCSS
Trigger: GCTTGAACACATGGTCCAGCAGAGGAAAGCCCAGCG...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCACTGCTTCTTGCTGGTaGGGATGGGAAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWITASCW*GWEGGS
Trigger: AGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGT...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTTGGGGAATCGTGAACTaGTTCTTGCTGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGWGIVN*FLLVRM
Trigger: CATCCGCACCAGCAAGAAGCAGTTCACGATTCCCCA...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAACCTCCAAAACTCAAATaGAAGGGATTCGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKPPKLK*KGFVSP
Trigger: GGGAGAAACGAATCCCTTGCATTTGAGTTTTGGAGG...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTCCACGGAGCTGTTTCTaGAGAACTCTGTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFPRSCF*RTLCRQ
Trigger: TTGCCTGCACAGAGTTCTCCAGAAACAGCTCCGTGG...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGATGTGTAATCTCCTTTaGGGAACTTGCTTTCTATCT +
Preference number: 4 (lower is better)
Translates to: PPVSKSASSIGWCTCSERMCNLL*GTCFLS
Trigger: AGATAGAAAGCAAGTTCCCCAAAGGAGATTACACAT...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCAGGGCTCAGGTGTGGTaGGGTCCTCACTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWIRAQVW*GPHSSY
Trigger: GTAAGAAGAGTGAGGACCCCACCACACCTGAGCCCT...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTTCTTGCTGGTGCGGATaGGAAGGAGGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFSCWCG*EGGSAS
Trigger: AGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGA...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTTTATCACTCAGAGGATaGGGAATCGTGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSLSLRG*GIVNCF
Trigger: GAAGCAGTTCACGATTCCCCATCCTCTGAGTGATAA...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp AAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGTTTCTGTTTGGCTTaGGTCAGTAATTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KGTVSSGLHGGGFPTTDCCFCLA*VSNSGS
Trigger: ACTTCCTGAATTACTGACCCAAGCCAAACAGAAACA...ACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTATCCAGTGGGTTACATaGAGGTGGTTTCCCCACAAC +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAIQWVT*RWFPHN
Trigger: GTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCGCCTCTAGCATTGGGTaGTGTACATGTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSASSIG*CTCSER
Trigger: CCTTTCTGAACATGTACACCACCCAATGCTAGAGGC...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCAAAGACCCATCCCTaGATCCTGAGCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFSKTHP*ILSVSA
Trigger: TGCAGAGACGCTCAGGATCCAGGGATGGGTCTTTGA...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480379.5
3UTR CAA 72 bp CATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATaGGGTGGTGTACATGTTCAGAAAGGTTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: HCTHRFPSQPLA*GGVHVQKGFKY
Trigger: ATATTTGAAACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTCTTGCAGGCGTTTGCTaGGACTCAGAACAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFLAGVC*DSEQSS
Trigger: CGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAG...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTGAGCGAGAAATGAACTaGGGCTTACGAACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAEREMN*GLRTSS
Trigger: ACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTC...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp TATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTCTTGTGAGCGAGAAATaGACTGAGGCTTACGAACTT +
Preference number: 4 (lower is better)
Translates to: YPVGYMEVVSPQQIVDLFLVSEK*TEAYEL
Trigger: AAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAG...AAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp AACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCCTTCAGCCGTTCTTGTaGGCGAGAAATGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: NRLLTYFLEGYCFCLAWVLQPFL*ARNELR
Trigger: CCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAG...GACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGCCAGTAATTGCTTTTTaGAGACTTCGGCACGGAGTC +
Preference number: 4 (lower is better)
Translates to: VVSPQQIVDLFSRGLLFLPVIAF*RLRHGV
Trigger: GACTCCGTGCCGAAGTCTTCAAAAAGCAATTACTGG...CAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTTGTATCAGGCCTCTCTaGTGGGCAGGAAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: VIVSVWLGSVIQEVMFSFCIRPL*WAGNSR
Trigger: CCTGCTGTTTCCTGCCCATCAGAGAGGCCTGATACA...AAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTACTTTTGTGTGTACTaGCCTGTAACTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAYFCVY*PVTPAR
Trigger: CCTGGCTGGAGTTACAGGGCAGTACACACAAAAGTA...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR GCA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAACTCCTTTGGGGAACTTaGTTTCTATCTGAACACCAT +
Preference number: 4 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKLLWGT*FLSEHH
Trigger: ATGGTGTTCAGATAGAAAGCAAGTTCCCCAAAGGAG...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR GCA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGACTTCCAGTGCTTCTTaGAAGGTCAAAGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRTSSAS*KVKDLA
Trigger: TGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGT...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp GTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTACTGCTTCTTGCTGGTaGGGATGGGAAGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VIVSVWLGSVIQEVMFSFTASCW*GWEGGS
Trigger: AGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGT...AAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCGGATCTGTGCATTTTaGGGCTGGCAATTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGRICAF*GWQFEV
Trigger: CACCTCAAATTGCCAGCCCCAAAATGCACAGATCCG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGTCTGCTGTTAATCTGTaGGAACTACAATTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVSAVNL*ELQLRL
Trigger: CAACCTCAATTGTAGTTCCCACAGATTAACAGCAGA...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCATGTGTAATCTCCTTTaGGGAACTTGCTTTCTATCT +
Preference number: 4 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVMCNLL*GTCFLS
Trigger: AGATAGAAAGCAAGTTCCCCAAAGGAGATTACACAT...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTTGGGCTTTCCTCTGCTaGACCATGTGTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGWAFLC*TMCSSF
Trigger: GAAGCTTGAACACATGGTCCAGCAGAGGAAAGCCCA...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCTTATCACTCAGAGGATaGGGAATCGTGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSLSLRG*GIVNCF
Trigger: GAAGCAGTTCACGATTCCCCATCCTCTGAGTGATAA...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
3UTR CAA 72 bp CAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATaGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QWVTWRWFPHNR*LTYFLEGYCFC
Trigger: ACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGCAATCATCTGGGAGATaGCTATGGATGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGQSSGR*LWMKSF
Trigger: AAATGATTTCATCCATAGTCATCTCCCAGATGATTG...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR TCA 90 bp AACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCGAGCGAGAAATGAACTaGGGCTTACGAACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NRLLTYFLEGYCFCLAWVEREMN*GLRTSS
Trigger: ACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTC...GACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCTGTCTGGAGAAAAACTaGTCTCTTTGTCGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSCLEKN*SLCRLH
Trigger: ATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACA...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTGGTTGGCATGATCGCTaGCGTGACAATGAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGGWHDR*RDNELY
Trigger: ATACAACTCATTGTCACGCCAGCGATCATGCCAACC...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
CDS-3UTR CCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTTGGGCTTTCCTCTGCTaGACCATGTGTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFWAFLC*TMCSSF
Trigger: GAAGCTTGAACACATGGTCCAGCAGAGGAAAGCCCA...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTTGTTTCTGTTTGGCTTaGGTCAGTAATTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSCFCLA*VSNSGS
Trigger: ACTTCCTGAATTACTGACCCAAGCCAAACAGAAACA...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGAACAGACAGCAAAGTTaGACCATTAGGCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVNRQQS*TIRLFL
Trigger: AAGAAATAGCCTAATGGTCCAACTTTGCTGTCTGTT...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR CAA 72 bp TGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTaGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: WVTWRWFPHNRL*TYFLEGYCFCL
Trigger: CAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTATGCATCTCCTTCTCTaGAATGCACCGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFMHLLL*NAPFFG
Trigger: CCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCAT...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR TCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCACAACAGATTGTTaGCCTATTTTCTCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGPTTDC*PIFSRV
Trigger: AACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAATCTGTGACATCAGACTaGAGATTTTTAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: VVRPHSFEGAGPVIARGKSVTSD*RFLRAI
Trigger: AATTGCCCTTAAAAATCTCCAGTCTGATGTCACAGA...TTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CCA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCGGTTGGCATGATCGCTaGCGTGACAATGAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWIGWHDR*RDNELY
Trigger: ATACAACTCATTGTCACGCCAGCGATCATGCCAACC...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCAGATTTTGCCTCTGTaGCATCAGACTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGQILPL*HQTGDF
Trigger: AAAATCTCCAGTCTGATGTCACAGAGGCAAAATCTG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR GCA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTGGATGTAAACAAACTTaGTTGTATCAGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFGCKQT*LYQASL
Trigger: CAGAGAGGCCTGATACAAGCAAGTTTGTTTACATCC...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTTTATCACTCAGAGGATaGGGAATCGTGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFLSLRG*GIVNCF
Trigger: GAAGCAGTTCACGATTCCCCATCCTCTGAGTGATAA...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCGTTATTGTTTCTGTTTaGCTTGGGTCAGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSVIVSV*LGSVIQ
Trigger: CTGAATTACTGACCCAAGCCAAACAGAAACAATAAC...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTCTCTTAGATCGCATATaGATCTCCTTCTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFLLDRI*ISFSEM
Trigger: CATTTCAGAGAAGGAGATGCATATGCGATCTAAGAG...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR GCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCTCTTAGATCGCATATaGATCTCCTTCTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGLLDRI*ISFSEM
Trigger: CATTTCAGAGAAGGAGATGCATATGCGATCTAAGAG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCTGTCTGGAGAAAAACTaGTCTCTTTGTCGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWICLEKN*SLCRLH
Trigger: ATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACA...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTTGTTTCTGTTTGGCTTaGGTCAGTAATTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGCFCLA*VSNSGS
Trigger: ACTTCCTGAATTACTGACCCAAGCCAAACAGAAACA...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp CCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTTCAAATATGTTATTGTTTCTGTTTaGCTTGGGTCAGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: PSQPLALGGVHVQKGFKYVIVSV*LGSVIQ
Trigger: CTGAATTACTGACCCAAGCCAAACAGAAACAATAAC...ATATTTGAAACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTCAATCATCTGGGAGATaGCTATGGATGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFQSSGR*LWMKSF
Trigger: AAATGATTTCATCCATAGTCATCTCCCAGATGATTG...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCTGTGACATCAGACTaGAGATTTTTAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFSVTSD*RFLRAI
Trigger: AATTGCCCTTAAAAATCTCCAGTCTGATGTCACAGA...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTTTCTCATCAATCATCTaGGAGATGACTATGGATGAA +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGFSSII*EMTMDE
Trigger: TTCATCCATAGTCATCTCCCAGATGATTGATGAGAA...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CCA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTGTTATTGTTTCTGTTTaGCTTGGGTCAGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGVIVSV*LGSVIQ
Trigger: CTGAATTACTGACCCAAGCCAAACAGAAACAATAAC...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
3UTR CAA 72 bp TTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTaGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLTYFLEGYCFC*AWVSNSGSDVF
Trigger: GAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CCA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTAACAGACAGCAAAGTTaGACCATTAGGCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFNRQQS*TIRLFL
Trigger: AAGAAATAGCCTAATGGTCCAACTTTGCTGTCTGTT...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
3UTR CAA 72 bp ACATTTTGGCATTTGCATAACTGGCAGGTGCTGAGATaGAAATTTAAAAGGAGATGGATTTGGATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TFWHLHNWQVLR*KFKRRWIWIPK
Trigger: TTTTGGGATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAAATGCCAAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR TCA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTATATTGTAGAAAACACTaGAGTTACGTCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLYCRKH*SYVRAS
Trigger: GGAAGCTCTGACGTAACTTCAGTGTTTTCTACAATA...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR GCA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTAGTTAGCTCCCACATTTaGCAATTCTGTGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLVSSHI*QFCVFQ
Trigger: TTGGAAAACACAGAATTGGCAAATGTGGGAGCTAAC...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS CCA 90 bp CTGTGCAGGCAAAAGATCTCTGATGCCGACCTGGATGGGCGCCATTaGCCAGAGCCGGGGGCGCCTGGAACAGTGTGTCCTCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LCRQKISDADLDGRH*PEPGAPGTVCPQPC
Trigger: GCAGGGCTGAGGACACACTGTTCCAGGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAGGTCGGCATCAGAGATCTTTTGCCTGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 90 bp GAAGGCCCTAGGGGAGGACCCTTCCTTGCCCTTCTCAGTGTCCCGTaGTGTCTGGCATCCTCTGTGTCCCTCGGCTTGGGACAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: EGPRGGPFLALLSVP*CLASSVSLGLGQPL
Trigger: GAGGGGCTGTCCCAAGCCGAGGGACACAGAGGATGCCAGACACCACGGGACACTGAGAAGGGCAAGGAAGGGTCCTCCCCTAGGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CCA 90 bp GGCTCCAGATCCCACCTGGCCACTCAGCCATGTCAGCTCCTCCTCTaGGCTCATCTTCCTCATCCGCGAGGCAAGGAGTGCACGCACCTG +
Preference number: 5 (lower is better)
Translates to: GSRSHLATQPCQLLL*AHLPHPRGKECTHL
Trigger: CAGGTGCGTGCACTCCTTGCCTCGCGGATGAGGAAGATGAGCCCAGAGGAGGAGCTGACATGGCTGAGTGGCCAGGTGGGATCTGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368674.5
CDS TCA 90 bp ACCACGGAGCTGTTTCTGGAGAACTCTGTGCAGGCAAAAGATCTCTaGTGCCGACCTGGATGGGCGCCATTGGCCAGAGCCGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: TTELFLENSVQAKDL*CRPGWAPLARAGGA
Trigger: GGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAGGTCGGCATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAAACAGCTCCGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS TCA 90 bp CACCTCCCTGCCCTGCTGGTGTCAGCAAGGTCACAATCAAGCTGGTaGCCCCACCAGCCTCATCTCCCAGCCGGTCCTGCCAAACCTTCT +
Preference number: 5 (lower is better)
Translates to: HLPALLVSARSQSSW*PHQPHLPAGPAKPS
Trigger: AGAAGGTTTGGCAGGACCGGCTGGGAGATGAGGCTGGTGGGGTCACCAGCTTGATTGTGACCTTGCTGACACCAGCAGGGCAGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp TGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGGCCCCCAAGCTGGATaGGTGCCTGCGTTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: WSAGQPVVRPHSFEGAGPGPQAG*VPAFVP
Trigger: GGGAACGAACGCAGGCACCAATCCAGCTTGGGGGCC...TGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS GCA 90 bp GTGAACTGCTTCTTGCTGGTGCGGATGGGAAGGAGGCTCTGCTTCTaGCTCAGGTCCTCCTTCCGCTGGGCTTTCCTCTGCTGGACCATG +
Preference number: 5 (lower is better)
Translates to: VNCFLLVRMGRRLCF*LRSSFRWAFLCWTM
Trigger: CATGGTCCAGCAGAGGAAAGCCCAGCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS GCA 90 bp GGAATCGTGAACTGCTTCTTGCTGGTGCGGATGGGAAGGAGGCTCTaGTTCTGCCTCAGGTCCTCCTTCCGCTGGGCTTTCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GIVNCFLLVRMGRRL*FCLRSSFRWAFLCW
Trigger: CCAGCAGAGGAAAGCCCAGCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS CCA 90 bp TCTGCATGGGTGACCCAGTACTTGCGTCTCTCACACAACCCAGTGTaGGCCTCGGGAACCTTCAGCCGCACCACGGAGCTGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SAWVTQYLRLSHNPV*ASGTFSRTTELFLE
Trigger: CTCCAGAAACAGCTCCGTGGTGCGGCTGAAGGTTCCCGAGGCCCACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGTCCTCAGCCCTGCACTaGGGGCACAGAGAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGSSALH*GHRESP
Trigger: TGGGGACTCTCTGTGCCCCAAGTGCAGGGCTGAGGA...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS GCA 90 bp CGGGAACCTTCAGCCGCACCACGGAGCTGTTTCTGGAGAACTCTGTaGAGGCAAAAGATCTCTGATGCCGACCTGGATGGGCGCCATTGG +
Preference number: 5 (lower is better)
Translates to: REPSAAPRSCFWRTL*RQKISDADLDGRHW
Trigger: CCAATGGCGCCCATCCAGGTCGGCATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAAACAGCTCCGTGGTGCGGCTGAAGGTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS GCA 90 bp TTCCAGCGCTGGCCTACGAGGTCCTGGTCTCCCTCCAGGAGCTCCTaGTTCAGGGCTTCGCTTATTGGCTCTCTGTTCACTAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: FQRWPTRSWSPSRSS*FRASLIGSLFTRPS
Trigger: AGATGGCCTAGTGAACAGAGAGCCAATAAGCGAAGCCCTGAAGCAGGAGCTCCTGGAGGGAGACCAGGACCTCGTAGGCCAGCGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 90 bp GACAAAGGCTCTGCTCCATTGCGTCAGTTCACCTCCCTGCCCTGCTaGTGTCAGCAAGGTCACAATCAAGCTGGTGACCCCACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: DKGSAPLRQFTSLPC*CQQGHNQAGDPTSL
Trigger: GAGGCTGGTGGGGTCACCAGCTTGATTGTGACCTTGCTGACACCAGCAGGGCAGGGAGGTGAACTGACGCAATGGAGCAGAGCCTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAACCTGGATGGGCGCCATaGGCCAGAGCCGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: VVRPHSFEGAGPVIARGKPGWAP*ARAGGA
Trigger: GGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAGG...TTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTCCCACAGGGGCTGGCTaGATGACCGTGAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAPTGAG*MTVSAA
Trigger: GGCAGCACTCACGGTCATCAAGCCAGCCCCTGTGGG...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS GCA 90 bp GCTCCTGAGACAAAGGCTCTGCTCCATTGCGTCAGTTCACCTCCCTaGCCTGCTGGTGTCAGCAAGGTCACAATCAAGCTGGTGACCCCA +
Preference number: 5 (lower is better)
Translates to: APETKALLHCVSSPP*PAGVSKVTIKLVTP
Trigger: TGGGGTCACCAGCTTGATTGTGACCTTGCTGACACCAGCAGGGCAGGGAGGTGAACTGACGCAATGGAGCAGAGCCTTTGTCTCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CCA 90 bp CAGTGTGGGCCTCGGGAACCTTCAGCCGCACCACGGAGCTGTTTCTaGAGAACTCTGTGCAGGCAAAAGATCTCTGATGCCGACCTGGAT +
Preference number: 5 (lower is better)
Translates to: QCGPREPSAAPRSCF*RTLCRQKISDADLD
Trigger: ATCCAGGTCGGCATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAAACAGCTCCGTGGTGCGGCTGAAGGTTCCCGAGGCCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp TGTGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCGCGGTTAGCCAGAGATaGCTTGGCGTGATGTGCACG +
Preference number: 5 (lower is better)
Translates to: CGQQGSLWLDRIPLKELVAVSQR*LGVMCT
Trigger: CGTGCACATCACGCCAAGCAATCTCTGGCTAACCGC...GACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTCAGGGTCTCTCCTCTTaGGGCGGCAGCTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAQGLSS*GGSSAS
Trigger: TGAGGCAGAGCTGCCGCCCAAAGAGGAGAGACCCTG...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp CTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGTCTGTGTCCCTCGGCTaGGGACAGCCCCTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: LIQHSKSSQVQVVWSAGQSVSLG*GQPLSN
Trigger: ATTAGAGAGGGGCTGTCCCAAGCCGAGGGACACAGA...CTGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 90 bp GTGGGGTGTCTGGAGAAAAACTGGTCTCTTTGTCGTCTGCATGGGTaGCCCAGTACTTGCGTCTCTCACACAACCCAGTGTGGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: VGCLEKNWSLCRLHG*PSTCVSHTTQCGPR
Trigger: CCGAGGCCCACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACACCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp GTTAGCCAGAGATTGCTTGGCGTGATGTGCACGAGACTGAGCAATGGCACACGGGCGGTTAGCCAGAGATaGCTTGGCGTGATGTGCACG +
Preference number: 5 (lower is better)
Translates to: VSQRLLGVMCTRLSNGTRAVSQR*LGVMCT
Trigger: CGTGCACATCACGCCAAGCAATCTCTGGCTAACCGC...CCGTGTGCCATTGCTCAGTCTCGTGCACATCACGCCAAGCAATCTCTGGCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463082.1
CDS-3UTR CAA 90 bp TGTGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCTTTGGGGCTGGCAATTaGAGGTGGCTCAATGGGGAC +
Preference number: 5 (lower is better)
Translates to: CGQQGSLWLDRIPLKELVFGAGN*RWLNGD
Trigger: GTCCCCATTGAGCCACCTCAAATTGCCAGCCCCAAA...GACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGATGAATGTGAATGGACAGTaGGTTGGCATGATCGCTGGC +
Preference number: 5 (lower is better)
Translates to: EWGGVTEGPLTAPGHKEMNVNGQ*VGMIAG
Trigger: GCCAGCGATCATGCCAACCAACTGTCCATTCACATT...CATCTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGCCACAGCCTCGGGCATaGCACCCACCGGTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PPVSKSASSIGWCTCSERPQPRA*HPPVSK
Trigger: CTTGGAAACCGGTGGGTGCAATGCCCGAGGCTGTGG...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS TCA 90 bp CACCCTGAGGTGGACACAGGAACTGAACACCAGCGGGCTCTTTCCTaGCAGTGGGGTGTCTGGAGAAAAACTGGTCTCTTTGTCGTCTGC +
Preference number: 5 (lower is better)
Translates to: HPEVDTGTEHQRALS*QWGVWRKTGLFVVC
Trigger: GCAGACGACAAAGAGACCAGTTTTTCTCCAGACACCCCACTGTCAGGAAAGAGCCCGCTGGTGTTCAGTTCCTGTGTCCACCTCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 90 bp GACAGTGGGGTGTCTGGAGAAAAACTGGTCTCTTTGTCGTCTGCATaGGTGACCCAGTACTTGCGTCTCTCACACAACCCAGTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: DSGVSGEKLVSLSSA*VTQYLRLSHNPVWA
Trigger: GGCCCACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACACCCCACTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 90 bp CTCTGCTTCTGCCTCAGGTCCTCCTTCCGCTGGGCTTTCCTCTGCTaGACCATGTGTTCAAGCTTCTTCAGCCGTTCTTGTGAGCGAGAA +
Preference number: 5 (lower is better)
Translates to: LCFCLRSSFRWAFLC*TMCSSFFSRSCERE
Trigger: TTCTCGCTCACAAGAACGGCTGAAGAAGCTTGAACACATGGTCCAGCAGAGGAAAGCCCAGCGGAAGGAGGACCTGAGGCAGAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS-3UTR CAA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCTGGATGGGCGCCATaGGCCAGAGCCGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGPGWAP*ARAGGA
Trigger: GGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAGG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCATCAGGGCTTCGCTTATaGGCTCTCTGTTCACTAGGC +
Preference number: 5 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRASGLRL*ALCSLG
Trigger: GCCTAGTGAACAGAGAGCCAATAAGCGAAGCCCTGA...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS TCA 90 bp ACTTCCAGTGCTTCTTGCAAGGTCAAAGATCTTGCAGGCGTTTGCTaGGACTCAGAACAGTCTTCGGACAGGCCAGGGCTCCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: TSSASCKVKDLAGVC*DSEQSSDRPGLPAP
Trigger: TGGAGCAGGGAGCCCTGGCCTGTCCGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 90 bp GCCCCCAAGCTGGATTGGTGCCTGCGTTCGTTCCCAGCGCTGCTGTaGAAAGTGACTACAAAGGGAGCAGCTGGATACAACAGGGATTTA +
Preference number: 5 (lower is better)
Translates to: APKLDWCLRSFPALL*KVTTKGAAGYNRDL
Trigger: TAAATCCCTGTTGTATCCAGCTGCTCCCTTTGTAGTCACTTTTCACAGCAGCGCTGGGAACGAACGCAGGCACCAATCCAGCTTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp TGTGGTCAGCAGGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCGAAAAACTGGTCTCTTaGTCGTCTGCATGGGTGACC +
Preference number: 5 (lower is better)
Translates to: CGQQGSLWLDRIPLKELVEKLVS*SSAWVT
Trigger: GGTCACCCATGCAGACGACAAAGAGACCAGTTTTTC...GACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCCTGCTGACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGTTTTCTCGAGGGTTATaGTTTCTGTTTGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKEFSRGL*FLFGLG
Trigger: ACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAA...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTGGGTGACCCAGTACTaGCGTCTCTCACACAACCCA +
Preference number: 5 (lower is better)
Translates to: PPVSKSASSIGWCTCSERWVTQY*RLSHNP
Trigger: TGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCA...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCTGGGTGACCCAGTACTaGCGTCTCTCACACAACCCA +
Preference number: 5 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSWVTQY*RLSHNP
Trigger: TGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCA...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp GAGGAATGGGGCGGGGTGACTGAGGGCCCTCTGACTGCTCCAGGTCACAAAGAGGGTTATTGTTTCTGTTaGGCTTGGGTCAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: EEWGGVTEGPLTAPGHKEGYCFC*AWVSNS
Trigger: TGAATTACTGACCCAAGCCAAACAGAAACAATAACC...CTCTTTGTGACCTGGAGCAGTCAGAGGGCCCTCAGTCACCCCGCCCCATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS TCA 90 bp AGCTGGATTGGTGCCTGCGTTCGTTCCCAGCGCTGCTGTGAAAAGTaGCTACAAAGGGAGCAGCTGGATACAACAGGGATTTACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SWIGACVRSQRCCEK*LQREQLDTTGIYSF
Trigger: GAAGGAGTAAATCCCTGTTGTATCCAGCTGCTCCCTTTGTAGTCACTTTTCACAGCAGCGCTGGGAACGAACGCAGGCACCAATCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS GCA 90 bp TTGGGTTTGAACAAGTTATCACTCAGAGGATGGGGAATCGTGAACTaGTTCTTGCTGGTGCGGATGGGAAGGAGGCTCTGCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LGLNKLSLRGWGIVN*FLLVRMGRRLCFCL
Trigger: GAGGCAGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGATTCCCCATCCTCTGAGTGATAACTTGTTCAAACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS CCA 90 bp GGTAGCTGTCCCGTAATCCTCCAACATCCAACTGAAAGCCAAGGCTaGTTTGCTCCTGAGACAAAGGCTCTGCTCCATTGCGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: GSCPVILQHPTESQG*FAPETKALLHCVSS
Trigger: TGAACTGACGCAATGGAGCAGAGCCTTTGTCTCAGGAGCAAACCAGCCTTGGCTTTCAGTTGGATGTTGGAGGATTACGGGACAGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCATCCAGTAATTGCTTTTaGAAGACTTCGGCACGGAGT +
Preference number: 5 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRASSNCF*KTSARS
Trigger: ACTCCGTGCCGAAGTCTTCAAAAAGCAATTACTGGA...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp CCTCGGGCATTGCACCCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTTGTAAACAAACTTGCTaGTATCAGGCCTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: PRALHPPVSKSASSIGWCCKQTC*YQASLM
Trigger: CATCAGAGAGGCCTGATACAAGCAAGTTTGTTTACA...ACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGGGTGCAATGCCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS TCA 90 bp AGGTGGCTCAATGGGGACGGAGAGAGACTTGTCTACGTAATAGATTaGATCTGGACACTGCTGAGACACCCTGAGGTGGACACAGGAACT +
Preference number: 5 (lower is better)
Translates to: RWLNGDGERLVYVID*IWTLLRHPEVDTGT
Trigger: AGTTCCTGTGTCCACCTCAGGGTGTCTCAGCAGTGTCCAGATTCAATCTATTACGTAGACAAGTCTCTCTCCGTCCCCATTGAGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 90 bp TCTCTCTGTGGGCTCAGAAAGGTCTCTAGACAGACAGTCATCGCTTaGAGAGCTATCCCCAATGGGAAGGAAATGTCTAGTGGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SLCGLRKVSRQTVIA*RAIPNGKEMSSGLL
Trigger: CAGAAGCCCACTAGACATTTCCTTCCCATTGGGGATAGCTCTCCAAGCGATGACTGTCTGTCTAGAGACCTTTCTGAGCCCACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCGATGCCAGGGTCTCCTaGGTGAAGTCAGATTTTGCC +
Preference number: 5 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVDARVS*VKSDFA
Trigger: GGCAAAATCTGACTTCACCAAGGAGACCCTGGCATC...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp CTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTCAGGGTCTCTCCTCTTaGGGCGGCAGCTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LEGYCFCLAWVSNSGSDVQGLSS*GGSSAS
Trigger: TGAGGCAGAGCTGCCGCCCAAAGAGGAGAGACCCTG...AACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp GGGCAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTTGGCGTGACAATGAGTaGTATGGTCCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: GQPVVRPHSFEGAGPVIAWRDNE*YGPFPL
Trigger: AAGGGGAAAAGGACCATACAACTCATTGTCACGCCA...AGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCACAGACAGTCATCGCTaGGAGAGCTATCCCCAATGG +
Preference number: 5 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVTDSHR*ESYPQW
Trigger: CCATTGGGGATAGCTCTCCAAGCGATGACTGTCTGT...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCGGGTTTCAGGAAGCTTaGATGTCGTCTCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVGFQEA*MSSLCG
Trigger: CCCACAGAGAGACGACATCAAAGCTTCCTGAAACCC...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTCCACAGCCTCGGGCATaGCACCCACCGGTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAPQPRA*HPPVSK
Trigger: CTTGGAAACCGGTGGGTGCAATGCCCGAGGCTGTGG...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS CCA 90 bp GGACGGATCTGTGCATTTTGGGGCTGGCAATTTGAGGTGGCTCAATaGGGACGGAGAGAGACTTGTCTACGTAATAGATTGAATCTGGAC +
Preference number: 5 (lower is better)
Translates to: GRICAFWGWQFEVAQ*GRRETCLRNRLNLD
Trigger: GTCCAGATTCAATCTATTACGTAGACAAGTCTCTCTCCGTCCCCATTGAGCCACCTCAAATTGCCAGCCCCAAAATGCACAGATCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp AACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCTCCTCAGCCCTGCACTaGGGGCACAGAGAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: NRLLTYFLEGYCFCLAWVSSALH*GHRESP
Trigger: TGGGGACTCTCTGTGCCCCAAGTGCAGGGCTGAGGA...GACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCGAACTACAATTGAGGTaGAGCGACAGGACGGATCTG +
Preference number: 5 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVELQLR*SDRTDL
Trigger: CAGATCCGTCCTGTCGCTCAACCTCAATTGTAGTTC...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGCTGTGGGAACTACAATaGAGGTTGAGCGACAGGACG +
Preference number: 5 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVLWELQ*RLSDRT
Trigger: CGTCCTGTCGCTCAACCTCAATTGTAGTTCCCACAG...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp AAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTGCAAGGTCAAAGATCTaGCAGGCGTTTGCTGAGACT +
Preference number: 5 (lower is better)
Translates to: KGTVSSGLHGGGFPTTDCARSKI*QAFAET
Trigger: AGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGC...ACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTATCGTGAACTGCTTCTaGCTGGTGCGGATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSIVNCF*LVRMGR
Trigger: CCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGAT...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGCAGAAATGCACCGTTCTTaGGGTTTGAACAAGTTATCA +
Preference number: 5 (lower is better)
Translates to: AYPAFEVLPGPGSVVSRAEMHRS*GLNKLS
Trigger: TGATAACTTGTTCAAACCCAAAGAACGGTGCATTTC...TGCCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp TGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCAGGGGGTTATTGTTTCTGTTaGGCTTGGGTCAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: WLIQHSKSSQVQVVWSAGGYCFC*AWVSNS
Trigger: TGAATTACTGACCCAAGCCAAACAGAAACAATAACC...CCCTGCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp AAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTAGTCAGCCTCTAGCATaGGGTGGTGTACATGTTCAG +
Preference number: 5 (lower is better)
Translates to: KGTVSSGLHGGGFPTTDCSQPLA*GGVHVQ
Trigger: CTGAACATGTACACCACCCAATGCTAGAGGCTGACT...ACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGAGGCCATTACCTTTTaGAAGACTTCGGCACGGAGT +
Preference number: 5 (lower is better)
Translates to: QPVVRPHSFEGAGPVIAREAITF*KTSARS
Trigger: ACTCCGTGCCGAAGTCTTCAAAAAGGTAATGGCCTC...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 90 bp GGGCAAAGAAACCCAGGAAAAAGGATTCTGGGTTTCAGGAAGCTTTaGTGTCGTCTCTCTGTGGGCTCAGAAAGGTCTCTAGACAGACAG +
Preference number: 5 (lower is better)
Translates to: GQRNPGKRILGFRKL*CRLSVGSERSLDRQ
Trigger: CTGTCTGTCTAGAGACCTTTCTGAGCCCACAGAGAGACGACATCAAAGCTTCCTGAAACCCAGAATCCTTTTTCCTGGGTTTCTTTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS TCA 90 bp GCACCACACACATCACACCTGCTGGTGACGAGGCCATTACCTTTTTaGAGACTTCGGCACGGAGTCTGTTACTTTGTAAGATCACCCTTT +
Preference number: 5 (lower is better)
Translates to: APHTSHLLVTRPLPF*RLRHGVCYFVRSPF
Trigger: AAAGGGTGATCTTACAAAGTAACAGACTCCGTGCCGAAGTCTTCAAAAAGGTAATGGCCTCGTCACCAGCAGGTGTGATGTGTGTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 90 bp TGCTGGCTGTCTGCTCAGCCGTCTTCAAGCCTTGACACATATGGATaGTACAAACTTTGGCTCTTCTCTGGGAGGGAAACCAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: CWLSAQPSSSLDTYG*YKLWLFSGRETSYS
Trigger: AGAGTAACTGGTTTCCCTCCCAGAGAAGAGCCAAAGTTTGTATCATCCATATGTGTCAAGGCTTGAAGACGGCTGAGCAGACAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS TCA 90 bp TGGATCTCATATCTGCTGGCTGTCTGCTCAGCCGTCTTCAAGCCTTaGCACATATGGATGATACAAACTTTGGCTCTTCTCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: WISYLLAVCSAVFKP*HIWMIQTLALLWEG
Trigger: TCCCTCCCAGAGAAGAGCCAAAGTTTGTATCATCCATATGTGTCAAGGCTTGAAGACGGCTGAGCAGACAGCCAGCAGATATGAGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS CCA 90 bp GGCTCTCTGTTCACTAGGCCATCTACTCCATCTGCTGTTAATCTGTaGGAACTACAATTGAGGTTGAGCGACAGGACGGATCTGTGCATT +
Preference number: 5 (lower is better)
Translates to: GSLFTRPSTPSAVNL*ELQLRLSDRTDLCI
Trigger: AATGCACAGATCCGTCCTGTCGCTCAACCTCAATTGTAGTTCCCACAGATTAACAGCAGATGGAGTAGATGGCCTAGTGAACAGAGAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 90 bp GCTATCCCCAATGGGAAGGAAATGTCTAGTGGGCTTCTGTTCCACTaGAGGAGCAGACACAGTCATACATACTTCTCCTTGTTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: AIPNGKEMSSGLLFH*RSRHSHTYFSLLPL
Trigger: AAGAGGCAACAAGGAGAAGTATGTATGACTGTGTCTGCTCCTCCAGTGGAACAGAAGCCCACTAGACATTTCCTTCCCATTGGGGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp CCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGACATACATACTTCTCCTaGTTGCCTCTTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PVVRPHSFEGAGPVIARGHTYFS*LPLAAS
Trigger: GGAAGCAGCAAGAGGCAACAAGGAGAAGTATGTATG...TCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp GTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGGCAAGGTCAAAGATCTaGCAGGCGTTTGCTGAGACT +
Preference number: 5 (lower is better)
Translates to: VRPHSFEGAGPVIARGKGARSKI*QAFAET
Trigger: AGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGC...CCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGCCCCACAACAGATTGTaGACCTATTTTCTCGAGGGT +
Preference number: 5 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQPHNRL*TYFLEG
Trigger: ACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp CTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGCCCACATTTTGGCATTaGCATAACTGGCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LSLMAYPAFEVLPGPGSVPTFWH*HNWQVL
Trigger: CAGCACCTGCCAGTTATGCAAATGCCAAAATGTGGG...CACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCTCCTGCCAAACCTTCTaGACATTGCCAGTTTGTGAC +
Preference number: 5 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVSCQTF*TLPVCD
Trigger: GTCACAAACTGGCAATGTCAAGAAGGTTTGGCAGGA...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 90 bp GGACCATGTGTTCAAGCTTCTTCAGCCGTTCTTGTGAGCGAGAAATaGACTGAGGCTTACGAACTTCCAGTGCTTCTTGCAAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GPCVQASSAVLVSEK*TEAYELPVLLARSK
Trigger: CTTTGACCTTGCAAGAAGCACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAGAAGCTTGAACACATGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 90 bp TTTCCTCTGCTGGACCATGTGTTCAAGCTTCTTCAGCCGTTCTTGTaGGCGAGAAATGAACTGAGGCTTACGAACTTCCAGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FPLLDHVFKLLQPFL*ARNELRLTNFQCFL
Trigger: CAAGAAGCACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAGAAGCTTGAACACATGGTCCAGCAGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 90 bp GGAAAGACTTTCATTTCTTTCCCAGGCAGAATGATCTTTGGGGGATaGGAAGAGTCGACTGTGGATCTCATATCTGCTGGCTGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: GKTFISFPGRMIFGG*EESTVDLISAGCLL
Trigger: GAGCAGACAGCCAGCAGATATGAGATCCACAGTCGACTCTTCTCATCCCCCAAAGATCATTCTGCCTGGGAAAGAAATGAAAGTCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS-3UTR CAA 90 bp TGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTGATGCCAGGGTCTCCTaGGTGAAGTCAGATTTTGCC +
Preference number: 5 (lower is better)
Translates to: WRWFPHNRLLTYFLEGYCDARVS*VKSDFA
Trigger: GGCAAAATCTGACTTCACCAAGGAGACCCTGGCATC...ACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp CCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGCGGTTAGCCAGAGATaGCTTGGCGTGATGTGCACG +
Preference number: 5 (lower is better)
Translates to: PQQIVDLFSRGLLFLFGLAVSQR*LGVMCT
Trigger: CGTGCACATCACGCCAAGCAATCTCTGGCTAACCGC...CAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGAATGTGAATGGACAGTaGGTTGGCATGATCGCTGGC +
Preference number: 5 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRNVNGQ*VGMIAG
Trigger: GCCAGCGATCATGCCAACCAACTGTCCATTCACATT...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
CDS-3UTR CAA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCACAGACAGTCATCGCTaGGAGAGCTATCCCCAATGG +
Preference number: 5 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSTDSHR*ESYPQW
Trigger: CCATTGGGGATAGCTCTCCAAGCGATGACTGTCTGT...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTAGATCTTGCAGGCGTTaGCTGAGACTCAGAACAGTC +
Preference number: 5 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSRSCRR*LRLRTV
Trigger: GACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCT...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGAGATCTTGCAGGCGTTaGCTGAGACTCAGAACAGTC +
Preference number: 5 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRRSCRR*LRLRTV
Trigger: GACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCT...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCTTTCCCCACAACAGATaGTTGACCTATTTTCTCGAG +
Preference number: 5 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSFPHNR*LTYFLE
Trigger: CTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAA...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS GCA 90 bp GAGGAGCAGACACAGTCATACATACTTCTCCTTGTTGCCTCTTGCTaGTTCCAGAAAATACTTTTGTGTGTACTGCCCTGTAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: EEQTQSYILLLVASC*FQKILLCVLPCNSS
Trigger: GCTGGAGTTACAGGGCAGTACACACAAAAGTATTTTCTGGAAGCAGCAAGAGGCAACAAGGAGAAGTATGTATGACTGTGTCTGCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS GCA 90 bp CTGGAGGAGCAGACACAGTCATACATACTTCTCCTTGTTGCCTCTTaGTGCTTCCAGAAAATACTTTTGTGTGTACTGCCCTGTAACTCC +
Preference number: 5 (lower is better)
Translates to: LEEQTQSYILLLVAS*CFQKILLCVLPCNS
Trigger: GGAGTTACAGGGCAGTACACACAAAAGTATTTTCTGGAAGCAGCAAGAGGCAACAAGGAGAAGTATGTATGACTGTGTCTGCTCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTTTGGGGCTGGCAATTaGAGGTGGCTCAATGGGGAC +
Preference number: 5 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFFGAGN*RWLNGD
Trigger: GTCCCCATTGAGCCACCTCAAATTGCCAGCCCCAAA...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAAACATACTTCTCCTTGTaGCCTCTTGCTGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKTYFSL*PLAASR
Trigger: TCTGGAAGCAGCAAGAGGCAACAAGGAGAAGTATGT...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp TATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTGCAAGGTCAAAGATCTaGCAGGCGTTTGCTGAGACT +
Preference number: 5 (lower is better)
Translates to: YPVGYMEVVSPQQIVDLFARSKI*QAFAET
Trigger: AGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGC...AAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTGCAAGGTCAAAGATCTaGCAGGCGTTTGCTGAGACT +
Preference number: 5 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFARSKI*QAFAET
Trigger: AGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGC...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp CCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGATCGTGAACTGCTTCTaGCTGGTGCGGATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PQQIVDLFSRGLLFLFGLIVNCF*LVRMGR
Trigger: CCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGAT...CAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTATCGTGAACTGCTTCTaGCTGGTGCGGATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGIVNCF*LVRMGR
Trigger: CCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGAT...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ACATTAAGGGGACTGTATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGTTTCCCCACAACAGATaGTTGACCTATTTTCTCGAG +
Preference number: 5 (lower is better)
Translates to: TLRGLYPVGYMEVVSPQQFPHNR*LTYFLE
Trigger: CTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAA...CTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATACAGTCCCCTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp AGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCTGGCAGGTGCTGAGATaGAAATTTAAAAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: SLMAYPAFEVLPGPGSVVWQVLR*KFKRRW
Trigger: CCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCA...GACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp TATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTCCCACATTTTGGCATTaGCATAACTGGCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: YPVGYMEVVSPQQIVDLFPTFWH*HNWQVL
Trigger: CAGCACCTGCCAGTTATGCAAATGCCAAAATGTGGG...AAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp TATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTAGTCAGCCTCTAGCATaGGGTGGTGTACATGTTCAG +
Preference number: 5 (lower is better)
Translates to: YPVGYMEVVSPQQIVDLFSQPLA*GGVHVQ
Trigger: CTGAACATGTACACCACCCAATGCTAGAGGCTGACT...AAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp CAGCCTGTGGTTAGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAAACAAAGATGTCAAGTaGAGATTCGGCATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: QPVVRPHSFEGAGPVIARNKDVK*RFGICA
Trigger: TGCACAGATGCCGAATCTCAACTTGACATCTTTGTT...TCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCTAACCACAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 90 bp GGAAAGACTTTCATTTCTTTCCCAGGCAGAATGATCTTTGGGGGATaGGAAGAGTCGACTGTGGATCAGACCAAGTACCTTTTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GKTFISFPGRMIFGG*EESTVDQTKYLLPK
Trigger: CTTTGGCAAAAGGTACTTGGTCTGATCCACAGTCGACTCTTCTCATCCCCCAAAGATCATTCTGCCTGGGAAAGAAATGAAAGTCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657225.1
CDS CCA 90 bp CACATACATCTTGTAAGGGGCAAAGAAACCCAGGAAAAAGGATTCTaGGTTTCAGGAAGCTTTGATGTCGTCTCTCTGTGGGCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: HIHLVRGKETQEKGF*VSGSFDVVSLWAQK
Trigger: TTTCTGAGCCCACAGAGAGACGACATCAAAGCTTCCTGAAACCCAGAATCCTTTTTCCTGGGTTTCTTTGCCCCTTACAAGATGTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS-3UTR CAA 90 bp CTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTGAAAAACTGGTCTCTTaGTCGTCTGCATGGGTGACC +
Preference number: 5 (lower is better)
Translates to: LEGYCFCLAWVSNSGSDVEKLVS*SSAWVT
Trigger: GGTCACCCATGCAGACGACAAAGAGACCAGTTTTTC...AACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp CCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTTCAAATATGAACTACAATTGAGGTaGAGCGACAGGACGGATCTG +
Preference number: 5 (lower is better)
Translates to: PSQPLALGGVHVQKGFKYELQLR*SDRTDL
Trigger: CAGATCCGTCCTGTCGCTCAACCTCAATTGTAGTTC...ATATTTGAAACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTCTGTGGGAACTACAATaGAGGTTGAGCGACAGGACG +
Preference number: 5 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFLWELQ*RLSDRT
Trigger: CGTCCTGTCGCTCAACCTCAATTGTAGTTCCCACAG...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp AACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCTCAGGGCTTCGCTTATaGGCTCTCTGTTCACTAGGC +
Preference number: 5 (lower is better)
Translates to: NRLLTYFLEGYCFCLAWVSGLRL*ALCSLG
Trigger: GCCTAGTGAACAGAGAGCCAATAAGCGAAGCCCTGA...GACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGAACTTCCAGTGCTTCTaGCAAGGTCAAAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRNFQCF*QGQRSC
Trigger: GCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGTT...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp AGACCGCATTCCTTTGAAGGAGCTGGTCCAGTAATTGCTAGAGGAAAAGGGAAAAACTTCCAGTGCTTCTaGCAAGGTCAAAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: RPHSFEGAGPVIARGKGKNFQCF*QGQRSC
Trigger: GCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGTT...TTTCCCTTTTCCTCTAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTAACTTCCAGTGCTTCTaGCAAGGTCAAAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSNFQCF*QGQRSC
Trigger: GCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGTT...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTAACTTCCAGTGCTTCTaGCAAGGTCAAAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSNFQCF*QGQRSC
Trigger: GCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGTT...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTATCGTGAACTGCTTCTaGCTGGTGCGGATGGGAAGG +
Preference number: 5 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFIVNCF*LVRMGR
Trigger: CCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGAT...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp TTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTGTGGTCAGCGTTGTAAAAACTAGCTaGTTCTTAGCTTCCCAAACA +
Preference number: 5 (lower is better)
Translates to: LMAYPAFEVLPGPGSVVSVVKTS*FLASQT
Trigger: TGTTTGGGAAGCTAAGAACAAGCTAGTTTTTACAAC...GCTGACCACACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp CCACCGGTTTCCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGGTTGTAAAAACTAGCTaGTTCTTAGCTTCCCAAACA +
Preference number: 5 (lower is better)
Translates to: PPVSKSASSIGWCTCSERVVKTS*FLASQT
Trigger: TGTTTGGGAAGCTAAGAACAAGCTAGTTTTTACAAC...CCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGGAAACCGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS TCA 90 bp ATGTGTTCAAGCTTCTTCAGCCGTTCTTGTGAGCGAGAAATGAACTaGGGCTTACGAACTTCCAGTGCTTCTTGCAAGGTCAAAGATCTT +
Preference number: 5 (lower is better)
Translates to: MCSSFFSRSCEREMN*GLRTSSASCKVKDL
Trigger: AAGATCTTTGACCTTGCAAGAAGCACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAGAAGCTTGAACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS-3UTR CAA 90 bp CCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTTGTCTACGTAATAGATaGAATCTGGACACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: PVGYMEVVSPQQIVDLFSCLRNR*NLDTAE
Trigger: CTCAGCAGTGTCCAGATTCAATCTATTACGTAGACA...AGAAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp ATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGTAGTTGTCTACGTAATAGATaGAATCTGGACACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: MLSLMAYPAFEVLPGPGSCLRNR*NLDTAE
Trigger: CTCAGCAGTGTCCAGATTCAATCTATTACGTAGACA...ACTACCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp CCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGGCGTGACAATGAGTaGTATGGTCCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PHNRLLTYFLEGYCFCLAWRDNE*YGPFPL
Trigger: AAGGGGAAAAGGACCATACAACTCATTGTCACGCCA...AGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp CCAAGTCAGCCTCTAGCATTGGGTGGTGTACATGTTCAGAAAGGTTTCAAATATTGGCGTGACAATGAGTaGTATGGTCCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PSQPLALGGVHVQKGFKYWRDNE*YGPFPL
Trigger: AAGGGGAAAAGGACCATACAACTCATTGTCACGCCA...ATATTTGAAACCTTTCTGAACATGTACACCACCCAATGCTAGAGGCTGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp GTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGCATACATACTTCTCCTaGTTGCCTCTTGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: VVSPQQIVDLFSRGLLFLHTYFS*LPLAAS
Trigger: GGAAGCAGCAAGAGGCAACAAGGAGAAGTATGTATG...CAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284694.11
CDS-3UTR CAA 90 bp GATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCAGGCACCGTTCTTTGGGTTaGAACAAGTTATCACTCAGA +
Preference number: 5 (lower is better)
Translates to: DNAKFNGLSSIRSPPRSRHRSLG*NKLSLR
Trigger: TCTGAGTGATAACTTGTTCAAACCCAAAGAACGGTG...CCTGGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCAAACCTTCTTGACATaGCCAGTTTGTGACCGTGAA +
Preference number: 5 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSQTFLT*PVCDRE
Trigger: TTCACGGTCACAAACTGGCAATGTCAAGAAGGTTTG...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS-3UTR CAA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTACATACTTCTCCTTGTaGCCTCTTGCTGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGTYFSL*PLAASR
Trigger: TCTGGAAGCAGCAAGAGGCAACAAGGAGAAGTATGT...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000356858.7
CDS-3UTR CAA 90 bp GTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTAGATCTTGCAGGCGTTaGCTGAGACTCAGAACAGTC +
Preference number: 5 (lower is better)
Translates to: VSPQQIVDLFSRGLLFLFRSCRR*LRLRTV
Trigger: GACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCT...AAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCACCGTTCTTTGGGTTaGAACAAGTTATCACTCAGA +
Preference number: 5 (lower is better)
Translates to: EDNAKFNGLSSIRSPPRSHRSLG*NKLSLR
Trigger: TCTGAGTGATAACTTGTTCAAACCCAAAGAACGGTG...GGACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATGAAGATAATGCTAAGTTTAATGGCTTATCCAGCATTCGAAGTCCTCCCAGGTCCCCACAACAGATTGTaGACCTATTTTCTCGAGGGT +
Preference number: 5 (lower is better)
Translates to: MKIMLSLMAYPAFEVLPGPHNRL*TYFLEG
Trigger: ACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG...ACCTGGGAGGACTTCGAATGCTGGATAAGCCATTAAACTTAGCATTATCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTTTGGCAGGTGCTGAGATaGAAATTTAAAAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: IQWVTWRWFPHNRLLTYFWQVLR*KFKRRW
Trigger: CCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCA...AAAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp GTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGCACCGTTCTTTGGGTTaGAACAAGTTATCACTCAGA +
Preference number: 5 (lower is better)
Translates to: VVSPQQIVDLFSRGLLFLHRSLG*NKLSLR
Trigger: TCTGAGTGATAACTTGTTCAAACCCAAAGAACGGTG...CAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp TATCCAGTGGGTTACATGGAGGTGGTTTCCCCACAACAGATTGTTGACCTATTTGAAATGCACCGTTCTTaGGGTTTGAACAAGTTATCA +
Preference number: 5 (lower is better)
Translates to: YPVGYMEVVSPQQIVDLFEMHRS*GLNKLS
Trigger: TGATAACTTGTTCAAACCCAAAGAACGGTGCATTTC...AAATAGGTCAACAATCTGTTGTGGGGAAACCACCTCCATGTAACCCACTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTTCTCGAGGGTTATaGTTTCTGTTTGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: VVSPQQIVDLFSRGLLFLFSRGL*FLFGLG
Trigger: ACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAA...CAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp CCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGTTTGGCTTGCACCGTTCTTTGGGTTaGAACAAGTTATCACTCAGA +
Preference number: 5 (lower is better)
Translates to: PQQIVDLFSRGLLFLFGLHRSLG*NKLSLR
Trigger: TCTGAGTGATAACTTGTTCAAACCCAAAGAACGGTG...CAAGCCAAACAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp GTGGTTTCCCCACAACAGATTGTTGACCTATTTTCTCGAGGGTTATTGTTTCTGGAAATGCACCGTTCTTaGGGTTTGAACAAGTTATCA +
Preference number: 5 (lower is better)
Translates to: VVSPQQIVDLFSRGLLFLEMHRS*GLNKLS
Trigger: TGATAACTTGTTCAAACCCAAAGAACGGTGCATTTC...CAGAAACAATAACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS TCA 90 bp CAAGTTATCATAGATTCTCTTAGATCGCATATGCATCTCCTTCTCTaGAATGCACCGTTCTTTGGGTTTGAACAAGTTATCACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: QVIIDSLRSHMHLLL*NAPFFGFEQVITQR
Trigger: CCTCTGAGTGATAACTTGTTCAAACCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCATATGCGATCTAAGAGAATCTATGATAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS-3UTR CAA 90 bp TCGAGGGTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTGGTTATTGTTTCTGTTaGGCTTGGGTCAGTAATTCA +
Preference number: 5 (lower is better)
Translates to: SRVIVSVWLGSVIQEVMFGYCFC*AWVSNS
Trigger: TGAATTACTGACCCAAGCCAAACAGAAACAATAACC...AAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAACCCTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTACCCCACAACAGATTGTaGACCTATTTTCTCGAGGGT +
Preference number: 5 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLPHNRL*TYFLEG
Trigger: ACCCTCGAGAAAATAGGTCAACAATCTGTTGTGGGG...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp TTGCATAACTGGCAGGTGCTGAGATTGAAATTTAAAAGGAGATGGATTTGGATCTTTCCCCACAACAGATaGTTGACCTATTTTCTCGAG +
Preference number: 5 (lower is better)
Translates to: LHNWQVLRLKFKRRWIWIFPHNR*LTYFLE
Trigger: CTCGAGAAAATAGGTCAACAATCTGTTGTGGGGAAA...GATCCAAATCCATCTCCTTTTAAATTTCAATCTCAGCACCTGCCAGTTATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp GTTATTGTTTCTGTTTGGCTTGGGTCAGTAATTCAGGAAGTGATGTTTTCCTTTTTTTCTCGAGGGTTATaGTTTCTGTTTGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: VIVSVWLGSVIQEVMFSFFSRGL*FLFGLG
Trigger: ACCCAAGCCAAACAGAAACAATAACCCTCGAGAAAA...AAAGGAAAACATCACTTCCTGAATTACTGACCCAAGCCAAACAGAAACAATAAC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000424927.5
ENST00000480379.5
CDS-3UTR CAA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTATGTAAACAAACTTGCTaGTATCAGGCCTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLCKQTC*YQASLM
Trigger: CATCAGAGAGGCCTGATACAAGCAAGTTTGTTTACA...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS-3UTR CAA 90 bp ATGTGTATTATAAACATTTGGAAGAACAGACAGCAAAGTTGGACCATTAGGCTAGAAATGCACCGTTCTTaGGGTTTGAACAAGTTATCA +
Preference number: 5 (lower is better)
Translates to: MCIINIWKNRQQSWTIRLEMHRS*GLNKLS
Trigger: TGATAACTTGTTCAAACCCAAAGAACGGTGCATTTC...TAGCCTAATGGTCCAACTTTGCTGTCTGTTCTTCCAAATGTTTATAATACACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284694.11
ENST00000424927.5
CDS CCA 72 bp GTCCCGATCCGCTGCTACCCCACATGGCCCCCAAGCTaGATTGGTGCCTGCGTTCGTTCCCAGCGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: VPIRCYPTWPPS*IGACVRSQRCC
Trigger: ACAGCAGCGCTGGGAACGAACGCAGGCACCAATCCAGCTTGGGGGCCATGTGGGGTAGCAGCGGATCGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CCA 72 bp CAAAAGATCTCTGATGCCGACCTGGATGGGCGCCATTaGCCAGAGCCGGGGGCGCCTGGAACAGTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: QKISDADLDGRH*PEPGAPGTVCP
Trigger: AGGACACACTGTTCCAGGCGCCCCCGGCTCTGGCCAATGGCGCCCATCCAGGTCGGCATCAGAGATCTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp GTGACCCAGTACTTGCGTCTCTCACACAACCCAGTGTaGGCCTCGGGAACCTTCAGCCGCACCACGGAGCTG +
Preference number: 6 (lower is better)
Translates to: VTQYLRLSHNPV*ASGTFSRTTEL
Trigger: CAGCTCCGTGGTGCGGCTGAAGGTTCCCGAGGCCCACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp AGGGGAGGACCCTTCCTTGCCCTTCTCAGTGTCCCGTaGTGTCTGGCATCCTCTGTGTCCCTCGGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: RGGPFLALLSVP*CLASSVSLGLG
Trigger: TCCCAAGCCGAGGGACACAGAGGATGCCAGACACCACGGGACACTGAGAAGGGCAAGGAAGGGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS GCA 72 bp TTCTTGCTGGTGCGGATGGGAAGGAGGCTCTGCTTCTaGCTCAGGTCCTCCTTCCGCTGGGCTTTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: FLLVRMGRRLCF*LRSSFRWAFLC
Trigger: GCAGAGGAAAGCCCAGCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS GCA 72 bp AACTGCTTCTTGCTGGTGCGGATGGGAAGGAGGCTCTaGTTCTGCCTCAGGTCCTCCTTCCGCTGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: NCFLLVRMGRRL*FCLRSSFRWAF
Trigger: GAAAGCCCAGCGGAAGGAGGACCTGAGGCAGAAGCAGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS GCA 72 bp TGGCCTACGAGGTCCTGGTCTCCCTCCAGGAGCTCCTaGTTCAGGGCTTCGCTTATTGGCTCTCTGTTCACT +
Preference number: 6 (lower is better)
Translates to: WPTRSWSPSRSS*FRASLIGSLFT
Trigger: AGTGAACAGAGAGCCAATAAGCGAAGCCCTGAAGCAGGAGCTCCTGGAGGGAGACCAGGACCTCGTAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp TCTGCTCCATTGCGTCAGTTCACCTCCCTGCCCTGCTaGTGTCAGCAAGGTCACAATCAAGCTGGTGACCCC +
Preference number: 6 (lower is better)
Translates to: SAPLRQFTSLPC*CQQGHNQAGDP
Trigger: GGGGTCACCAGCTTGATTGTGACCTTGCTGACACCAGCAGGGCAGGGAGGTGAACTGACGCAATGGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CAA 72 bp CTGGTCTCTTTGTCGTCTGCATGGGTGACCCAGTACTaGCGTCTCTCACACAACCCAGTGTGGGCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: LVSLSSAWVTQY*RLSHNPVWASG
Trigger: TCCCGAGGCCCACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS TCA 72 bp CTGTTTCTGGAGAACTCTGTGCAGGCAAAAGATCTCTaGTGCCGACCTGGATGGGCGCCATTGGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LFLENSVQAKDL*CRPGWAPLARA
Trigger: GGCTCTGGCCAATGGCGCCCATCCAGGTCGGCATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS TCA 72 bp CAGCCTCATCTCCCAGCCGGTCCTGCCAAACCTTCTTaGCATTGCCAGTTTGTGACCGTGAAGGCCACATGG +
Preference number: 6 (lower is better)
Translates to: QPHLPAGPAKPS*HCQFVTVKATW
Trigger: CCATGTGGCCTTCACGGTCACAAACTGGCAATGTCAAGAAGGTTTGGCAGGACCGGCTGGGAGATGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CCA 72 bp CCTCGGGAACCTTCAGCCGCACCACGGAGCTGTTTCTaGAGAACTCTGTGCAGGCAAAAGATCTCTGATGCC +
Preference number: 6 (lower is better)
Translates to: PREPSAAPRSCF*RTLCRQKISDA
Trigger: GGCATCAGAGATCTTTTGCCTGCACAGAGTTCTCCAGAAACAGCTCCGTGGTGCGGCTGAAGGTTCCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CAA 90 bp GGAGAAAAACTGGTCTCTTTGTCGTCTGCATGGGTGACCCAGTACTaGCGTCTCTCACACAACCCAGTGTGGGCCTCGGGAACCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GEKLVSLSSAWVTQY*RLSHNPVWASGTFS
Trigger: GCTGAAGGTTCCCGAGGCCCACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CAA 90 bp CCACCAGCCTCATCTCCCAGCCGGTCCTGCCAAACCTTCTTGACATaGCCAGTTTGTGACCGTGAAGGCCACATGGTCCTCCAAAACTCA +
Preference number: 6 (lower is better)
Translates to: PPASSPSRSCQTFLT*PVCDREGHMVLQNS
Trigger: TGAGTTTTGGAGGACCATGTGGCCTTCACGGTCACAAACTGGCAATGTCAAGAAGGTTTGGCAGGACCGGCTGGGAGATGAGGCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS GCA 72 bp ACAAAGGCTCTGCTCCATTGCGTCAGTTCACCTCCCTaGCCTGCTGGTGTCAGCAAGGTCACAATCAAGCTG +
Preference number: 6 (lower is better)
Translates to: TKALLHCVSSPP*PAGVSKVTIKL
Trigger: CAGCTTGATTGTGACCTTGCTGACACCAGCAGGGCAGGGAGGTGAACTGACGCAATGGAGCAGAGCCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CCA 72 bp TGCCTCAGGTCCTCCTTCCGCTGGGCTTTCCTCTGCTaGACCATGTGTTCAAGCTTCTTCAGCCGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: CLRSSFRWAFLC*TMCSSFFSRSC
Trigger: ACAAGAACGGCTGAAGAAGCTTGAACACATGGTCCAGCAGAGGAAAGCCCAGCGGAAGGAGGACCTGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS CCA 72 bp TGTTTAACCCAGGTATTGAGTGCAACAGGAGGGACTTaGGCAGTGCCCCAGCTCGGACCTGTCCCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: CLTQVLSATGGT*AVPQLGPVPVF
Trigger: AAACACTGGGACAGGTCCGAGCTGGGGCACTGCCCAAGTCCCTCCTGTTGCACTCAATACCTGGGTTAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS CAA 72 bp CTCCCTCCAGGAGCTCCTGCTTCAGGGCTTCGCTTATaGGCTCTCTGTTCACTAGGCCATCTACTCCATCTG +
Preference number: 6 (lower is better)
Translates to: LPPGAPASGLRL*ALCSLGHLLHL
Trigger: CAGATGGAGTAGATGGCCTAGTGAACAGAGAGCCAATAAGCGAAGCCCTGAAGCAGGAGCTCCTGGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CAA 72 bp TCATCTCCCAGCCGGTCCTGCCAAACCTTCTTGACATaGCCAGTTTGTGACCGTGAAGGCCACATGGTCCTC +
Preference number: 6 (lower is better)
Translates to: SSPSRSCQTFLT*PVCDREGHMVL
Trigger: GAGGACCATGTGGCCTTCACGGTCACAAACTGGCAATGTCAAGAAGGTTTGGCAGGACCGGCTGGGAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CAA 90 bp ACGAACTTCCAGTGCTTCTTGCAAGGTCAAAGATCTTGCAGGCGTTaGCTGAGACTCAGAACAGTCTTCGGACAGGCCAGGGCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: TNFQCFLQGQRSCRR*LRLRTVFGQARAPC
Trigger: GCAGGGAGCCCTGGCCTGTCCGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 72 bp GCTTCTTGCAAGGTCAAAGATCTTGCAGGCGTTTGCTaGGACTCAGAACAGTCTTCGGACAGGCCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: ASCKVKDLAGVC*DSEQSSDRPGL
Trigger: GAGCCCTGGCCTGTCCGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGCAAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 72 bp CTGGATTGGTGCCTGCGTTCGTTCCCAGCGCTGCTGTaGAAAGTGACTACAAAGGGAGCAGCTGGATACAAC +
Preference number: 6 (lower is better)
Translates to: LDWCLRSFPALL*KVTTKGAAGYN
Trigger: GTTGTATCCAGCTGCTCCCTTTGTAGTCACTTTTCACAGCAGCGCTGGGAACGAACGCAGGCACCAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 72 bp TCGGCATCTGTGCACCACACACATCACACCTGCTGGTaGCGAGGCCATTACCTTTTTGAAGACTTCGGCACG +
Preference number: 6 (lower is better)
Translates to: SASVHHTHHTCW*RGHYLFEDFGT
Trigger: CGTGCCGAAGTCTTCAAAAAGGTAATGGCCTCGTCACCAGCAGGTGTGATGTGTGTGGTGCACAGATGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CAA 72 bp CCTGACAGTGGGGTGTCTGGAGAAAAACTGGTCTCTTaGTCGTCTGCATGGGTGACCCAGTACTTGCGTCTC +
Preference number: 6 (lower is better)
Translates to: PDSGVSGEKLVS*SSAWVTQYLRL
Trigger: GAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACACCCCACTGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CAA 90 bp GGGCTCTTTCCTGACAGTGGGGTGTCTGGAGAAAAACTGGTCTCTTaGTCGTCTGCATGGGTGACCCAGTACTTGCGTCTCTCACACAAC +
Preference number: 6 (lower is better)
Translates to: GLFPDSGVSGEKLVS*SSAWVTQYLRLSHN
Trigger: GTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACACCCCACTGTCAGGAAAGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS TCA 72 bp GTGGACACAGGAACTGAACACCAGCGGGCTCTTTCCTaGCAGTGGGGTGTCTGGAGAAAAACTGGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: VDTGTEHQRALS*QWGVWRKTGLF
Trigger: AAAGAGACCAGTTTTTCTCCAGACACCCCACTGTCAGGAAAGAGCCCGCTGGTGTTCAGTTCCTGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS GCA 72 bp AACAAGTTATCACTCAGAGGATGGGGAATCGTGAACTaGTTCTTGCTGGTGCGGATGGGAAGGAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: NKLSLRGWGIVN*FLLVRMGRRLC
Trigger: GCAGAGCCTCCTTCCCATCCGCACCAGCAAGAAGCAGTTCACGATTCCCCATCCTCTGAGTGATAACTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS GCA 72 bp GGGAAACAAAGATGTCAAGTTGAGATTCGGCATCTGTaGACCACACACATCACACCTGCTGGTGACGAGGCC +
Preference number: 6 (lower is better)
Translates to: GKQRCQVEIRHL*TTHITPAGDEA
Trigger: GGCCTCGTCACCAGCAGGTGTGATGTGTGTGGTGCACAGATGCCGAATCTCAACTTGACATCTTTGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CCA 72 bp CCCGTAATCCTCCAACATCCAACTGAAAGCCAAGGCTaGTTTGCTCCTGAGACAAAGGCTCTGCTCCATTGC +
Preference number: 6 (lower is better)
Translates to: PVILQHPTESQG*FAPETKALLHC
Trigger: GCAATGGAGCAGAGCCTTTGTCTCAGGAGCAAACCAGCCTTGGCTTTCAGTTGGATGTTGGAGGATTACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS CAA 72 bp CAGTGCTTCTTGCAAGGTCAAAGATCTTGCAGGCGTTaGCTGAGACTCAGAACAGTCTTCGGACAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QCFLQGQRSCRR*LRLRTVFGQAR
Trigger: CCTGGCCTGTCCGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGCAAGAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS CAA 90 bp GCTAGTGAGACTGGCAAACACAATTTTCTTTGTTTAACCCAGGTATaGAGTGCAACAGGAGGGACTTGGGCAGTGCCCCAGCTCGGACCT +
Preference number: 6 (lower is better)
Translates to: ASETGKHNFLCLTQV*SATGGTWAVPQLGP
Trigger: AGGTCCGAGCTGGGGCACTGCCCAAGTCCCTCCTGTTGCACTCAATACCTGGGTTAAACAAAGAAAATTGTGTTTGCCAGTCTCACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS TCA 72 bp CTGGAGAAAAACTGGTCTCTTTGTCGTCTGCATGGGTaGCCCAGTACTTGCGTCTCTCACACAACCCAGTGT +
Preference number: 6 (lower is better)
Translates to: LEKNWSLCRLHG*PSTCVSHTTQC
Trigger: ACACTGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS GCA 72 bp TGGGGTGTCTGGAGAAAAACTGGTCTCTTTGTCGTCTaGATGGGTGACCCAGTACTTGCGTCTCTCACACAA +
Preference number: 6 (lower is better)
Translates to: WGVWRKTGLFVV*MGDPVLASLTQ
Trigger: TTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp GTGTCTGGAGAAAAACTGGTCTCTTTGTCGTCTGCATaGGTGACCCAGTACTTGCGTCTCTCACACAACCCA +
Preference number: 6 (lower is better)
Translates to: VSGEKLVSLSSA*VTQYLRLSHNP
Trigger: TGGGTTGTGTGAGAGACGCAAGTACTGGGTCACCCATGCAGACGACAAAGAGACCAGTTTTTCTCCAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CAA 90 bp ACTAGGCCATCTACTCCATCTGCTGTTAATCTGTGGGAACTACAATaGAGGTTGAGCGACAGGACGGATCTGTGCATTTTGGGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: TRPSTPSAVNLWELQ*RLSDRTDLCILGLA
Trigger: TGCCAGCCCCAAAATGCACAGATCCGTCCTGTCGCTCAACCTCAATTGTAGTTCCCACAGATTAACAGCAGATGGAGTAGATGGCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS TCA 72 bp AATGGGGACGGAGAGAGACTTGTCTACGTAATAGATTaGATCTGGACACTGCTGAGACACCCTGAGGTGGAC +
Preference number: 6 (lower is better)
Translates to: NGDGERLVYVID*IWTLLRHPEVD
Trigger: GTCCACCTCAGGGTGTCTCAGCAGTGTCCAGATTCAATCTATTACGTAGACAAGTCTCTCTCCGTCCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS GCA 72 bp CAAACACAATTTTCTTTGTTTAACCCAGGTATTGAGTaGAACAGGAGGGACTTGGGCAGTGCCCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: QTQFSLFNPGIE*NRRDLGSAPAR
Trigger: CCGAGCTGGGGCACTGCCCAAGTCCCTCCTGTTGCACTCAATACCTGGGTTAAACAAAGAAAATTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS CCA 72 bp GGGCTCAGAAAGGTCTCTAGACAGACAGTCATCGCTTaGAGAGCTATCCCCAATGGGAAGGAAATGTCTAGT +
Preference number: 6 (lower is better)
Translates to: GLRKVSRQTVIA*RAIPNGKEMSS
Trigger: ACTAGACATTTCCTTCCCATTGGGGATAGCTCTCCAAGCGATGACTGTCTGTCTAGAGACCTTTCTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS CAA 90 bp GGGGCAAAGAAACCCAGGAAAAAGGATTCTGGGTTTCAGGAAGCTTaGATGTCGTCTCTCTGTGGGCTCAGAAAGGTCTCTAGACAGACA +
Preference number: 6 (lower is better)
Translates to: GAKKPRKKDSGFQEA*MSSLCGLRKVSRQT
Trigger: TGTCTGTCTAGAGACCTTTCTGAGCCCACAGAGAGACGACATCAAAGCTTCCTGAAACCCAGAATCCTTTTTCCTGGGTTTCTTTGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS CAA 90 bp TGCACCACACACATCACACCTGCTGGTGACGAGGCCATTACCTTTTaGAAGACTTCGGCACGGAGTCTGTTACTTTGTAAGATCACCCTT +
Preference number: 6 (lower is better)
Translates to: CTTHITPAGDEAITF*KTSARSLLLCKITL
Trigger: AAGGGTGATCTTACAAAGTAACAGACTCCGTGCCGAAGTCTTCAAAAAGGTAATGGCCTCGTCACCAGCAGGTGTGATGTGTGTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 72 bp AGCTTCTTCAGCCGTTCTTGTGAGCGAGAAATGAACTaGGGCTTACGAACTTCCAGTGCTTCTTGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: SFFSRSCEREMN*GLRTSSASCKV
Trigger: GACCTTGCAAGAAGCACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 72 bp CTGGACCATGTGTTCAAGCTTCTTCAGCCGTTCTTGTaGGCGAGAAATGAACTGAGGCTTACGAACTTCCAG +
Preference number: 6 (lower is better)
Translates to: LDHVFKLLQPFL*ARNELRLTNFQ
Trigger: CTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAGAAGCTTGAACACATGGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 72 bp TCTGCTCAGCCGTCTTCAAGCCTTGACACATATGGATaGTACAAACTTTGGCTCTTCTCTGGGAGGGAAACC +
Preference number: 6 (lower is better)
Translates to: SAQPSSSLDTYG*YKLWLFSGRET
Trigger: GGTTTCCCTCCCAGAGAAGAGCCAAAGTTTGTATCATCCATATGTGTCAAGGCTTGAAGACGGCTGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS GCA 72 bp ACGAACTTCCAGTGCTTCTTGCAAGGTCAAAGATCTTaGAGGCGTTTGCTGAGACTCAGAACAGTCTTCGGA +
Preference number: 6 (lower is better)
Translates to: TNFQCFLQGQRS*RRLLRLRTVFG
Trigger: TCCGAAGACTGTTCTGAGTCTCAGCAAACGCCTGCAAGATCTTTGACCTTGCAAGAAGCACTGGAAGTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS CCA 72 bp TGTGCATTTTGGGGCTGGCAATTTGAGGTGGCTCAATaGGGACGGAGAGAGACTTGTCTACGTAATAGATTG +
Preference number: 6 (lower is better)
Translates to: CAFWGWQFEVAQ*GRRETCLRNRL
Trigger: CAATCTATTACGTAGACAAGTCTCTCTCCGTCCCCATTGAGCCACCTCAAATTGCCAGCCCCAAAATGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp CAGGAATGTGAATGGACAGTTGGTTGGCATGATCGCTaGCGTGACAATGAGTTGTATGGTCCTTTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: QECEWTVGWHDR*RDNELYGPFPL
Trigger: AAGGGGAAAAGGACCATACAACTCATTGTCACGCCAGCGATCATGCCAACCAACTGTCCATTCACATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000424927.5
ENST00000432642.5
ENST00000488181.3
CDS CAA 72 bp CACATCACACCTGCTGGTGACGAGGCCATTACCTTTTaGAAGACTTCGGCACGGAGTCTGTTACTTTGTAAG +
Preference number: 6 (lower is better)
Translates to: HITPAGDEAITF*KTSARSLLLCK
Trigger: CTTACAAAGTAACAGACTCCGTGCCGAAGTCTTCAAAAAGGTAATGGCCTCGTCACCAGCAGGTGTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 72 bp GTTCAAGCTTCTTCAGCCGTTCTTGTGAGCGAGAAATaGACTGAGGCTTACGAACTTCCAGTGCTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: VQASSAVLVSEK*TEAYELPVLLA
Trigger: TGCAAGAAGCACTGGAAGTTCGTAAGCCTCAGTTCATTTCTCGCTCACAAGAACGGCTGAAGAAGCTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS TCA 72 bp ACATCACACCTGCTGGTGACGAGGCCATTACCTTTTTaGAGACTTCGGCACGGAGTCTGTTACTTTGTAAGA +
Preference number: 6 (lower is better)
Translates to: TSHLLVTRPLPF*RLRHGVCYFVR
Trigger: TCTTACAAAGTAACAGACTCCGTGCCGAAGTCTTCAAAAAGGTAATGGCCTCGTCACCAGCAGGTGTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356858.7
CDS TCA 72 bp TATCTGCTGGCTGTCTGCTCAGCCGTCTTCAAGCCTTaGCACATATGGATGATACAAACTTTGGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: YLLAVCSAVFKP*HIWMIQTLALL
Trigger: GAGAAGAGCCAAAGTTTGTATCATCCATATGTGTCAAGGCTTGAAGACGGCTGAGCAGACAGCCAGCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS TCA 72 bp TTCATTTCTTTCCCAGGCAGAATGATCTTTGGGGGATaGGAAGAGTCGACTGTGGATCTCATATCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: FISFPGRMIFGG*EESTVDLISAG
Trigger: GCCAGCAGATATGAGATCCACAGTCGACTCTTCTCATCCCCCAAAGATCATTCTGCCTGGGAAAGAAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS CCA 72 bp TTCACTAGGCCATCTACTCCATCTGCTGTTAATCTGTaGGAACTACAATTGAGGTTGAGCGACAGGACGGAT +
Preference number: 6 (lower is better)
Translates to: FTRPSTPSAVNL*ELQLRLSDRTD
Trigger: ATCCGTCCTGTCGCTCAACCTCAATTGTAGTTCCCACAGATTAACAGCAGATGGAGTAGATGGCCTAGTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000368674.5
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp AATGGGAAGGAAATGTCTAGTGGGCTTCTGTTCCACTaGAGGAGCAGACACAGTCATACATACTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: NGKEMSSGLLFH*RSRHSHTYFSL
Trigger: CAAGGAGAAGTATGTATGACTGTGTCTGCTCCTCCAGTGGAACAGAAGCCCACTAGACATTTCCTTCCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS TCA 72 bp TTCATTTCTTTCCCAGGCAGAATGATCTTTGGGGGATaGGAAGAGTCGACTGTGGATCAGACCAAGTACCTT +
Preference number: 6 (lower is better)
Translates to: FISFPGRMIFGG*EESTVDQTKYL
Trigger: AAGGTACTTGGTCTGATCCACAGTCGACTCTTCTCATCCCCCAAAGATCATTCTGCCTGGGAAAGAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657225.1
CDS CAA 72 bp CGCATATGCATCTCCTTCTCTGAAATGCACCGTTCTTaGGGTTTGAACAAGTTATCACTCAGAGGATGGGGA +
Preference number: 6 (lower is better)
Translates to: RICISFSEMHRS*GLNKLSLRGWG
Trigger: TCCCCATCCTCTGAGTGATAACTTGTTCAAACCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCATATGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3
CDS GCA 72 bp GAACAAGTCCAAAAGGTGATCTCATCCAAACACACTTaGAGGACTTTCTCTGCGTCCTCACTTTCAAGCATT +
Preference number: 6 (lower is better)
Translates to: EQVQKVISSKHT*RTFSASSLSSI
Trigger: AATGCTTGAAAGTGAGGACGCAGAGAAAGTCCTGCAAGTGTGTTTGGATGAGATCACCTTTTGGACTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657225.1
CDS CCA 72 bp AAAGACTTTCATTTCTTTCCCAGGCAGAATGATCTTTaGGGGATGAGAAGAGTCGACTGTGGATCAGACCAA +
Preference number: 6 (lower is better)
Translates to: KDFHFFPRQNDL*GMRRVDCGSDQ
Trigger: TTGGTCTGATCCACAGTCGACTCTTCTCATCCCCCAAAGATCATTCTGCCTGGGAAAGAAATGAAAGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657225.1
CDS CAA 72 bp GCAGACACAGTCATACATACTTCTCCTTGTTGCCTCTaGCTGCTTCCAGAAAATACTTTTGTGTGTACTGCC +
Preference number: 6 (lower is better)
Translates to: ADTVIHTSPCCL*LLPENTFVCTA
Trigger: GGCAGTACACACAAAAGTATTTTCTGGAAGCAGCAAGAGGCAACAAGGAGAAGTATGTATGACTGTGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS TCA 72 bp TGTGGTAGCTGTCCCGTAATCCTTCTCCAGACAGTTTaGGCATATTCTACTGAGGTTTCAAAGCCATTTTAC +
Preference number: 6 (lower is better)
Translates to: CGSCPVILLQTV*AYSTEVSKPFY
Trigger: GTAAAATGGCTTTGAAACCTCAGTAGAATATGCTCAAACTGTCTGGAGAAGGATTACGGGACAGCTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284694.11
ENST00000432642.5
ENST00000463082.1
CDS GCA 72 bp ACACAGTCATACATACTTCTCCTTGTTGCCTCTTGCTaGTTCCAGAAAATACTTTTGTGTGTACTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: TQSYILLLVASC*FQKILLCVLPC
Trigger: ACAGGGCAGTACACACAAAAGTATTTTCTGGAAGCAGCAAGAGGCAACAAGGAGAAGTATGTATGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000432642.5
ENST00000488181.3
CDS CCA 72 bp AAAGACTTTCATTTCTTTCCCAGGCAGAATGATCTTTaGGGGATGAGAAGAGTCGACTGTGGATCTCATATC +
Preference number: 6 (lower is better)
Translates to: KDFHFFPRQNDL*GMRRVDCGSHI
Trigger: GATATGAGATCCACAGTCGACTCTTCTCATCCCCCAAAGATCATTCTGCCTGGGAAAGAAATGAAAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488181.3
CDS TCA 72 bp TCAGACCAAGTACCTTTTGCCAAAGGCAATAGCTGCTaGGTCCATTTTCACCATCAAACATGGGAACTAAAT +
Preference number: 6 (lower is better)
Translates to: SDQVPFAKGNSC*VHFHHQTWELN
Trigger: ATTTAGTTCCCATGTTTGATGGTGAAAATGGACTCAGCAGCTATTGCCTTTGGCAAAAGGTACTTGGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657225.1
CDS TCA 72 bp ATAGATTCTCTTAGATCGCATATGCATCTCCTTCTCTaGAATGCACCGTTCTTTGGGTTTGAACAAGTTATC +
Preference number: 6 (lower is better)
Translates to: IDSLRSHMHLLL*NAPFFGFEQVI
Trigger: GATAACTTGTTCAAACCCAAAGAACGGTGCATTTCAGAGAAGGAGATGCATATGCGATCTAAGAGAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284694.11
ENST00000356858.7
ENST00000424927.5
ENST00000432642.5
ENST00000480379.5
ENST00000488181.3