Pregenerated sensors for C10ORF88 (Homo sapiens)
Ensembl gene IDs: ENSG00000119965Ensembl transcript IDs: ENST00000481909.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCTTCCTTTTTGTCCTTTCATGGCTTCTTCTGGTCACTGTCATaGCGATTGTCAACTGTCATGGAGCTAGCAGGAGCGTTATTTAGC | + |
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Preference number: 1 (lower is better) Translates to: LPSFLSFHGFFWSLS*RLSTVMELAGALFS Trigger: GCTAAATAACGCTCCTGCTAGCTCCATGACAGTTGACAATCGCCATGACAGTGACCAGAAGAAGCCATGAAAGGACAAAAAGGAAGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CCA 90 bp | CAGAGAGAATTGCAATCCCTTGACTCATATGTGTTCATCCTTCCATaGAGAGCCTCATTATTTCATACAATAAACATGCCAGAAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: QRELQSLDSYVFILP*RASLFHTINMPEKD Trigger: ATCCTTTTCTGGCATGTTTATTGTATGAAATAATGAGGCTCTCCATGGAAGGATGAACACATATGAGTCAAGGGATTGCAATTCTCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCAGAATTGCAATCCCTTaGCTCATATGTGTTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: SYRGCNQSPLDWLQKELFRIAIP*LICVHP Trigger: AGGATGAACACATATGAGTCAAGGGATTGCAATTCT...GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAAGTAACCAGTCTCCTCTaGACTGGTTACAAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: AKGGIFLDFSEMGSELPKVTSLL*TGYKRN Trigger: GTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTAC...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAATTTCATGGCTTCTTCTaGTCACTGTCATGGCGATTG | + |
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Preference number: 2 (lower is better) Translates to: AKGGIFLDFSEMGSELPKFHGFF*SLSWRL Trigger: CAATCGCCATGACAGTGACCAGAAGAAGCCATGAAA...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CCA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCGTGTTCATCCTTCCATaGAGAGCCTCATTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: YRGCNQSPLDWLQKELFIVFILP*RASLFH Trigger: ATGAAATAATGAGGCTCTCCATGGAAGGATGAACAC...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGACTGGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGTGTAAACTGGTAATCTaGAGTAAAGGCTCCAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LWTGYKRNFSSQASCFLKCKLVI*SKGSKS Trigger: AGACTTGGAGCCTTTACTTCAGATTACCAGTTTACA...CTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCAGTTCCCAGAGCAGGTaGATTTATTTTTATATGCAA | + |
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Preference number: 2 (lower is better) Translates to: SYRGCNQSPLDWLQKELFSSQSR*IYFYMQ Trigger: TTGCATATAAAAATAAATGCACCTGCTCTGGGAACT...GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTCAATCGCCACTGAATTGAGAAGCAGGAGTATGGCTCACAAATCAACTCAGTCTCCTCTGGACTaGTTACAAAAGGAACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: FYSIATELRSRSMAHKSTQSPLD*LQKELF Trigger: GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTG...AGTTGATTTGTGAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTGAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGACTGGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGGTCAAACAAGATGACTaGATCTGTTTTACAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LWTGYKRNFSSQASCFLKVKQDD*ICFTGK Trigger: TTTTCCTGTAAAACAGATGCAGTCATCTTGTTTGAC...CTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGATAAGCAGATCTATCAGAGAGAATTaGAATCCCTTGACTCATATG | + |
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Preference number: 2 (lower is better) Translates to: GYKRNFSSQASCFLKISRSIREN*NPLTHM Trigger: CATATGAGTCAAGGGATTGCAATTCTCTCTGATAGA...TCTGCTTATCTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CCA 72 bp | TTTTTGTCCTTTCATGGCTTCTTCTGGTCACTGTCATaGCGATTGTCAACTGTCATGGAGCTAGCAGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: FLSFHGFFWSLS*RLSTVMELAGA Trigger: CGCTCCTGCTAGCTCCATGACAGTTGACAATCGCCATGACAGTGACCAGAAGAAGCCATGAAAGGACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CCA 72 bp | GTCAGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTaGTTACAAAAGGAACTTTTCATCACAGGCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: VSYRGCNQSPLD*LQKELFITGIL Trigger: CAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR GCA 72 bp | CAGAAATGGGCAGTGAACTTCCTAAAACCAGAGTGCTaGCTTCCTTTTTGTCCTTTCATGGCTTCTTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: QKWAVNFLKPEC*LPFCPFMASSG Trigger: ACCAGAAGAAGCCATGAAAGGACAAAAAGGAAGGCAGCACTCTGGTTTTAGGAAGTTCACTGCCCATTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CCA 72 bp | GTTTGGTCAGCTATCGTGGTTGTAACCAGTCTCCTCTaGACTGGTTACAAAAGGAACTTTTCATCACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VWSAIVVVTSLL*TGYKRNFSSQA Trigger: TGCCTGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCTGACCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTATTCAATCGCCACTGAATTGAGAAGCAGGAGTATGGCTCACAAATCAACTGAGAATTGCAATCCCTaGACTCATATGTGTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: FYSIATELRSRSMAHKSTENCNP*THMCSS Trigger: GGATGAACACATATGAGTCAAGGGATTGCAATTCTC...AGTTGATTTGTGAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTGAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR TCA 72 bp | ACAAACACTGCAGGTTTTATTCAATCGCCACTGAATTaGGAAGCAGGAGTATGGCTCACAAATCAACTTTTC | + |
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Preference number: 3 (lower is better) Translates to: TNTAGFIQSPLN*EAGVWLTNQLF Trigger: GAAAAGTTGATTTGTGAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTGAATAAAACCTGCAGTGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CCA 72 bp | AGGTGTTTCACATTCAAGCAAAGGGAGGAATATTCCTaGATTTTTCAGAAATGGGCAGTGAACTTCCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: RCFTFKQREEYS*IFQKWAVNFLK Trigger: TTTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGCTTGAATGTGAAACACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGATAAGCAGAAAAACTGAGGTCACTTaGTGTAAGACAATGATCCCT | + |
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Preference number: 3 (lower is better) Translates to: GYKRNFSSQASCFLKISRKTEVT*CKTMIP Trigger: AGGGATCATTGTCTTACACAAAGTGACCTCAGTTTT...TCTGCTTATCTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGATAAGCAGAGTCTATCAGAGAGAATaGCAATCCCTTGACTCATAT | + |
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Preference number: 3 (lower is better) Translates to: GYKRNFSSQASCFLKISRVYQRE*QSLDSY Trigger: ATATGAGTCAAGGGATTGCAATTCTCTCTGATAGAC...TCTGCTTATCTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAAACCTGGAGCAGGCGGTaGCAGCAGCTCCTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: AKGGIFLDFSEMGSELPKTWSRR*QQLLPV Trigger: GACTGGGAGGAGCTGCTGGCACCGCCTGCTCCAGGT...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR TCA 90 bp | CGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCACAAAAATCACCAGATCCTaGCCTGGAGCAGGCGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RGCNQSPLDWLQKELFITKITRS*PGAGGA Trigger: GGCACCGCCTGCTCCAGGTCAGGATCTGGTGATTTT...TGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAACACCAGATCCTGACCTaGAGCAGGCGGTGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AKGGIFLDFSEMGSELPKHQILT*SRRCQQ Trigger: CTGCTGGCACCGCCTGCTCCAGGTCAGGATCTGGTG...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR TCA 90 bp | AGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCCAATCGCCACTGAATTaGGAAGCAGGAGTATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SYRGCNQSPLDWLQKELFQSPLN*EAGVWL Trigger: GAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTG...GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CAA 72 bp | TCCTTTCATGGCTTCTTCTGGTCACTGTCATGGCGATaGTCAACTGTCATGGAGCTAGCAGGAGCGTTATTT | + |
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Preference number: 4 (lower is better) Translates to: SFHGFFWSLSWR*STVMELAGALF Trigger: AAATAACGCTCCTGCTAGCTCCATGACAGTTGACAATCGCCATGACAGTGACCAGAAGAAGCCATGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR TCA 90 bp | AGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATACAATTCCGCTGCTaGCACCTAACCATATCCATC | + |
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Preference number: 4 (lower is better) Translates to: SYRGCNQSPLDWLQKELFIQFRC*HLTISI Trigger: GATGGATATGGTTAGGTGTCAGCAGCGGAATTGTAT...GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | AGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCGTAACCAGTCTCCTCTaGACTGGTTACAAAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SYRGCNQSPLDWLQKELFVTSLL*TGYKRN Trigger: GTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTAC...GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | CGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCACACTAAAACCAGAGTGCTaGCTTCCTTTTTGTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RGCNQSPLDWLQKELFITLKPEC*LPFCPF Trigger: GAAAGGACAAAAAGGAAGGCAGCACTCTGGTTTTAG...TGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | AGCTATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCGGGGAGTTAGGATTTTaGAGCAAATCCAGTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: SYRGCNQSPLDWLQKELFGELGF*SKSSNK Trigger: TTTGTTACTGGATTTGCTGCAAAATCCTAACTCCCC...GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCTTCCTAAAACCAGAGTaGTGCCTTCCTTTTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YRGCNQSPLDWLQKELFIFLKPE*CLPFCP Trigger: AGGACAAAAAGGAAGGCAGCACTCTGGTTTTAGGAA...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCCAGTCTCCTCTGGACTaGTTACAAAAGGAACTTTTC | + |
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Preference number: 4 (lower is better) Translates to: YRGCNQSPLDWLQKELFIQSPLD*LQKELF Trigger: GAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTG...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| 3UTR CAA 72 bp | CTGAAAACTAAGTCTATCAGAGAGAATTGCAATCCCTaGACTCATATGTGTTCATCCTTCCATGGAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LKTKSIRENCNP*THMCSSFHGEP Trigger: AGGCTCTCCATGGAAGGATGAACACATATGAGTCAAGGGATTGCAATTCTCTCTGATAGACTTAGTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR TCA 90 bp | TTTTATTCAATCGCCACTGAATTGAGAAGCAGGAGTATGGCTCACAAATCAACTTTGGTGATGTTTTCCTaGCACTCGGTCTTATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: FYSIATELRSRSMAHKSTLVMFS*HSVLFP Trigger: GGGAAATAAGACCGAGTGTCAGGAAAACATCACCAA...AGTTGATTTGTGAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTGAATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCAGGGAGGAATATTCCTaGATTTTTCAGAAATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YRGCNQSPLDWLQKELFIREEYS*IFQKWA Trigger: TGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCT...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAAAAGAGTGACAAACACTaGAGGTTTTATTCAATCGCC | + |
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Preference number: 4 (lower is better) Translates to: AKGGIFLDFSEMGSELPKKSDKH*RFYSIA Trigger: GGCGATTGAATAAAACCTGCAGTGTTTGTCACTCTT...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCGTGTTCATCCTTCCATaGAGAGCCTCATTATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FKQREEYSWIFQKWAVNFVFILP*RASLFH Trigger: ATGAAATAATGAGGCTCTCCATGGAAGGATGAACAC...GAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGCTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR TCA 90 bp | TTCTTAAACTGTCTGGGGTTACTGAGGTCAAACAAGATGACTGCATCTGTTTTAAGAATTGCAATCCCTTaGCTCATATGTGTTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: FLNCLGLLRSNKMTASVLRIAIP*LICVHP Trigger: AGGATGAACACATATGAGTCAAGGGATTGCAATTCT...TAAAACAGATGCAGTCATCTTGTTTGACCTCAGTAACCCCAGACAGTTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | TTTTATTCAATCGCCACTGAATTGAGAAGCAGGAGTATGGCTCACAAATCAACTTGTAGTCCAATCATATaGTTGTATCCAGAATTGCCC | + |
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Preference number: 4 (lower is better) Translates to: FYSIATELRSRSMAHKSTCSPII*LYPELP Trigger: GGGCAATTCTGGATACAAGCATATGATTGGACTACA...AGTTGATTTGTGAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTGAATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAATCTATCAGAGAGAATTaGAATCCCTTGACTCATATG | + |
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Preference number: 4 (lower is better) Translates to: AKGGIFLDFSEMGSELPKSIREN*NPLTHM Trigger: CATATGAGTCAAGGGATTGCAATTCTCTCTGATAGA...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCAGTTCCCAGAGCAGGTaGATTTATTTTTATATGCAA | + |
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Preference number: 4 (lower is better) Translates to: YRGCNQSPLDWLQKELFISSQSR*IYFYMQ Trigger: TTGCATATAAAAATAAATGCACCTGCTCTGGGAACT...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR TCA 90 bp | TTCTTAAACTGTCTGGGGTTACTGAGGTCAAACAAGATGACTGCATCTGTTTTAGGAGTTGGGTATATTTaGGTTGTCACTTACTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLNCLGLLRSNKMTASVLGVGYI*VVTYFL Trigger: AAGAAAGTAAGTGACAACTCAAATATACCCAACTCC...TAAAACAGATGCAGTCATCTTGTTTGACCTCAGTAACCCCAGACAGTTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGACTGGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGTTTTACAAGCATGTGTaGAGGACTCCAATTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: LWTGYKRNFSSQASCFLKFYKHV*RTPILD Trigger: ATCTAAAATTGGAGTCCTCCACACATGCTTGTAAAA...CTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR GCA 90 bp | TTCTTAAACTGTCTGGGGTTACTGAGGTCAAACAAGATGACTGCATCTGTTTTAGTCAAACAAGATGACTaGATCTGTTTTACAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: FLNCLGLLRSNKMTASVLVKQDD*ICFTGK Trigger: TTTTCCTGTAAAACAGATGCAGTCATCTTGTTTGAC...TAAAACAGATGCAGTCATCTTGTTTGACCTCAGTAACCCCAGACAGTTTAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CCA 90 bp | TTCTTAAACTGTCTGGGGTTACTGAGGTCAAACAAGATGACTGCATCTGTTTTATGGATTTTTCAGAAATaGGCAGTGAACTTCCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: FLNCLGLLRSNKMTASVLWIFQK*AVNFLK Trigger: TTTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCA...TAAAACAGATGCAGTCATCTTGTTTGACCTCAGTAACCCCAGACAGTTTAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | CGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCACATCACTGTCATGGCGATaGTCAACTGTCATGGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: RGCNQSPLDWLQKELFITSLSWR*STVMEL Trigger: TAGCTCCATGACAGTTGACAATCGCCATGACAGTGA...TGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | GGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGATAAGCAGATGTCAAGGTCTATCCTaGATCCTAGAGCAGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GYKRNFSSQASCFLKISRCQGLS*ILEQES Trigger: GCTCTCCTGCTCTAGGATCAAGGATAGACCTTGACA...TCTGCTTATCTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCCTCTCCACCAGGCAGTaGTGTACTTTTATCAATGTA | + |
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Preference number: 5 (lower is better) Translates to: YRGCNQSPLDWLQKELFILSTRQ*CTFINV Trigger: TACATTGATAAAAGTACACAACTGCCTGGTGGAGAG...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | CGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCACAAAAACTGAGGTCACTTaGTGTAAGACAATGATCCCT | + |
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Preference number: 5 (lower is better) Translates to: RGCNQSPLDWLQKELFITKTEVT*CKTMIP Trigger: AGGGATCATTGTCTTACACAAAGTGACCTCAGTTTT...TGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | TATCGTGGTTGTAACCAGTCTCCTCTGGACTGGTTACAAAAGGAACTTTTCATCGAGAATTGCAATCCCTaGACTCATATGTGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: YRGCNQSPLDWLQKELFIENCNP*THMCSS Trigger: GGATGAACACATATGAGTCAAGGGATTGCAATTCTC...GATGAAAAGTTCCTTTTGTAACCAGTCCAGAGGAGACTGGTTACAACCACGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | TTTTATTCAATCGCCACTGAATTGAGAAGCAGGAGTATGGCTCACAAATCAACTAGTCCAATCATATGCTaGTATCCAGAATTGCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: FYSIATELRSRSMAHKSTSPIIC*YPELPN Trigger: GTTGGGCAATTCTGGATACAAGCATATGATTGGACT...AGTTGATTTGTGAGCCATACTCCTGCTTCTCAATTCAGTGGCGATTGAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGACTGGTTACAAAAGGAACTTTTCATCACAGGCATCCTGTTTCTTAAAGGTCTATCAGAGAGAATaGCAATCCCTTGACTCATAT | + |
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Preference number: 5 (lower is better) Translates to: LWTGYKRNFSSQASCFLKVYQRE*QSLDSY Trigger: ATATGAGTCAAGGGATTGCAATTCTCTCTGATAGAC...CTTTAAGAAACAGGATGCCTGTGATGAAAAGTTCCTTTTGTAACCAGTCCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | GCAAAGGGAGGAATATTCCTGGATTTTTCAGAAATGGGCAGTGAACTTCCTAAAAAGAAAGGAATGGTTTaGAGGCATAACTTTACACTC | + |
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Preference number: 5 (lower is better) Translates to: AKGGIFLDFSEMGSELPKKKGMV*RHNFTL Trigger: GAGTGTAAAGTTATGCCTCAAAACCATTCCTTTCTT...TTTAGGAAGTTCACTGCCCATTTCTGAAAAATCCAGGAATATTCCTCCCTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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| CDS-3UTR CAA 90 bp | TTCTTAAACTGTCTGGGGTTACTGAGGTCAAACAAGATGACTGCATCTGTTTTACGGAGTTGGGTATATTaGAGTTGTCACTTACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLNCLGLLRSNKMTASVLRSWVY*SCHLLS Trigger: AGAAAGTAAGTGACAACTCAAATATACCCAACTCCG...TAAAACAGATGCAGTCATCTTGTTTGACCTCAGTAACCCCAGACAGTTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481909.2 |
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