RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C10ORF71 (Homo sapiens)

Ensembl gene IDs: ENSG00000177354

Ensembl transcript IDs: ENST00000374144.8, ENST00000470615.1

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTaGGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGT +
Preference number: 1 (lower is better)
Translates to: PGEGGREGGRRAGVE*AWELARRGPGQASS
Trigger: ACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR GCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTaGCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: GGCGYRGTLGTRRCP*HTHLICRAREEQGG
Trigger: CCCACCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 90 bp CCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTaGGCCAGGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGT +
Preference number: 1 (lower is better)
Translates to: PLPHPPNLQGEGRAG*ARRGRKGGREKGWS
Trigger: ACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCCTGGCCCACCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 90 bp GCTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTaGGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCC +
Preference number: 1 (lower is better)
Translates to: AGGLRGLLIKELTSE*VGVGTEGHLGPGGA
Trigger: GGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 90 bp GGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTaGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTG +
Preference number: 1 (lower is better)
Translates to: GALGVCSSRSLQVSG*VWVQRDTWDQAVPL
Trigger: CAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR TCA 90 bp CAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTTTGGGTaGGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATC +
Preference number: 1 (lower is better)
Translates to: QAVPLHQRRAREPFG*GRLGIPTAFWTLWI
Trigger: GATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 90 bp TTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTaGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACAC +
Preference number: 1 (lower is better)
Translates to: LGVCSSRSLQVSGWV*VQRDTWDQAVPLPH
Trigger: GTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR GCA 90 bp GTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTaGAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTG +
Preference number: 1 (lower is better)
Translates to: VSPCEGNPFCANDHF*KIALGWSLASLPEL
Trigger: CAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CAA 90 bp GGGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTaGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: GWVWVQRDTWDQAVP*PHPPNLQGEGRAGW
Trigger: CCACCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CCA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCTGGGTGAGGTCGTCTTaGGATCCCTACTGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: VECAWELARRGPGQASSAWVRSS*DPYCLL
Trigger: CAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCA...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CCA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTCCTCTGGGTTCATCTaGGGGTGGGGGACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNSSGFI*GWGTAC
Trigger: GCAGGCTGTCCCCCACCCCCAGATGAACCCAGAGGA...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAAGGAAGTAAGCTCCTCTaGGTTCATCTGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GEGGREGGRRAGVECAWEGSKLL*VHLGVG
Trigger: CCCCACCCCCAGATGAACCCAGAGGAGCTTACTTCC...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR GCA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGGGCCAAGCAAGCAGTaGCCCTCCATCAGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRGPSKQ*PSIRGE
Trigger: CTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCC...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR GCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGCTTGGGACCAGGCGGTaGCCTTGCCACACCCACCTA +
Preference number: 2 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVLGTRR*PCHTHL
Trigger: TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAG...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR GCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAATCTTGGGATCCCTACTaGCTTCTGGACTTTATGGAT +
Preference number: 2 (lower is better)
Translates to: GEGGREGGRRAGVECAWESWDPY*LLDFMD
Trigger: ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGA...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTGGGTTCATCTGGGGGTaGGGGACAGCCTGCAGTAAC +
Preference number: 2 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPGFIWG*GTACSN
Trigger: GTTACTGCAGGCTGTCCCCCACCCCCAGATGAACCC...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGGAGTAGAGTGCGCCTaGGAACTGGCACGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PVKETHSVQMIISAKLPWGVECA*ELARRG
Trigger: TCCCCTCCGTGCCAGTTCCCAGGCGCACTCTACTCC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CCA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAGTACAGAGGGACACTTaGGACCAGGCGGTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: GKFLPVKETHSVQMIISAVQRDT*DQAVPL
Trigger: CAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTAC...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 72 bp AGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTaGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGC +
Preference number: 3 (lower is better)
Translates to: REGGRRAGVECA*ELARRGPGQAS
Trigger: GCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 72 bp GCCAGGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTaGAGTAGAGTGCGCCTGGGAACTGGCACGGAGGGG +
Preference number: 3 (lower is better)
Translates to: ARRGRKGGREKG*SRVRLGTGTEG
Trigger: CCCCTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR GCA 72 bp GGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTaGCCCTCCATCAGAGGAGAGCCAGGGAGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: GTGTEGTGPSKQ*PSIRGEPGSPL
Trigger: CAAAGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR GCA 72 bp GGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTaGAGGGCGAGGGAAGAGCAGGGTGGGCCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: GTRRCPCHTHLI*RAREEQGGPGE
Trigger: CTCTCCTGGCCCACCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 72 bp CACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTaGGCCAGGAGAGGGAGGAAGGGAGGGAGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: HPPNLQGEGRAG*ARRGRKGGREK
Trigger: CTTCTCCCTCCCTCCCTTCCTCCCTCTCCTGGCCCACCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR GCA 72 bp GGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTaGCACACCCACCTAATTTGCAGGGCGAGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GYRGTLGTRRCP*HTHLICRAREE
Trigger: CTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR CCA 72 bp TGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTaGGTACAGAGGGACACTTGGGACCAGGCGGTGCCC +
Preference number: 3 (lower is better)
Translates to: CSSRSLQVSGWV*VQRDTWDQAVP
Trigger: GGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CAA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGAAGGCTAAGTATGTGTaGATGATCGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GGDRAKQAVPLHQRRAREKAKYV*MIVCVC
Trigger: ACACACACACACGATCATCAACACATACTTAGCCTT...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CAA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCGGGGGCCTTAGGGGTTaGCTCATCAAGGAGCTTACA +
Preference number: 3 (lower is better)
Translates to: HFCKIALGWSLASLPELTGGLRG*LIKELT
Trigger: TGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR-3UTR CAA 90 bp AAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTGAGCCAGGGAGCCCTTaGGGTGAGGTCGTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: KETHSVQMIISAKLPWAGEPGSP*GEVVLG
Trigger: TCCCAAGACGACCTCACCCAAAGGGCTCCCTGGCTC...ACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
3UTR GCA 72 bp GGAGCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTaGCTTCTGGACTTTATGGATCTAAAAAGGCTAAGT +
Preference number: 3 (lower is better)
Translates to: GALWVRSSWDPY*LLDFMDLKRLS
Trigger: ACTTAGCCTTTTTAGATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTAAGCCGGACACGGAGTaGCGGTGCACGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GTGPSKQCPSIRGEPGSPKPDTE*RCTGGG
Trigger: GCCCCCTCCCGTGCACCGCCACTCCGTGTCCGGCTT...AGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGACACGAGGGCCCTGCCTaGGGAAGGTGGGCGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRHEGPA*GRWARR
Trigger: TCTCCGCGCCCACCTTCCTCAGGCAGGGCCCTCGTG...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGGGACACTCTGGGTCCTaGCGCGGGCCGCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGGHSGS*RGPRRH
Trigger: GTGCCTCCGCGGCCCGCGCCAGGACCCAGAGTGTCC...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGCCGTCACGGGCACTaGCTGGAAGCCGGGGTACAG +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRGRHGH*LEAGVQ
Trigger: CTGTACCCCGGCTTCCAGCCAGTGCCCGTGACGGCC...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGGCACGGAGGACTCGTGGACACTCTaGGTCCTGGCGCGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KGGREKGWSRVRLGTGTEDSWTL*VLARAA
Trigger: CGCGGCCCGCGCCAGGACCCAGAGTGTCCACGAGTC...CTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCGCCAGGTGCAGCATCTaGTGGTGCCTTCACCCGGTC +
Preference number: 4 (lower is better)
Translates to: VECAWELARRGPGQASSAARCSI*WCLHPV
Trigger: GACCGGGTGAAGGCACCACCAGATGCTGCACCTGGC...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGAGTGCGCCTGGGAACTaGCACGGAGGGGACCGGGCC +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQSAPGN*HGGDRA
Trigger: GGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACT...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCAGGGAGCCCTTTGGGTaGGGTCGTCTTGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: VECAWELARRGPGQASSAREPFG*GRLGIP
Trigger: AGGGATCCCAAGACGACCTCACCCAAAGGGCTCCCT...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGGCCATGCTCGACCCCTaGCCAGGGTCCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGAMLDP*PGSSMT
Trigger: GGTCATGGAGGACCCTGGGCAGGGGTCGAGCATGGC...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCAATGAGGGCGCTGGCCTaGAGAGTGCGGGGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: WVWVQRDTWDQAVPLPHPMRALA*RVRGAV
Trigger: GACTGCACCCCGCACTCTGCAGGCCAGCGCCCTCAT...TGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCAGGTGGCCGTGTCATTaGCTGCTGGGAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VECAWELARRGPGQASSARWPCH*LLGGSC
Trigger: GCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCT...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGTGGGGCGGTGTTCCCTaGAGTCTGGACACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELARRGPGQASSAPPSEEWGGVP*SLDTSW
Trigger: CCAGCTGGTGTCCAGACTCCAGGGAACACCGCCCCA...CTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTGCCATGGGGGTGGCTaGTCTTCTATGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: RVRLGTGTEGTGPSKQCPCHGGG*SSMSPS
Trigger: CGAGGGTGACATAGAAGACCAGCCACCCCCATGGCA...GGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGTCCTGGAGGACCTTCTaGGTGGCGGGGTACGCGGGC +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQSWRTF*VAGYAG
Trigger: GCCCGCGTACCCCGCCACCCAGAAGGTCCTCCAGGA...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp AGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCCTGGGGATTGATGTGTaGTGCAGTGGGGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: RVRLGTGTEGTGPSKQCPLGIDV*CSGVIS
Trigger: GCTGATGACCCCACTGCATCACACATCAATCCCCAG...GGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGCCCAGGGGCTGGCTTaGTTAGGCTCCTCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQAQGLA*LGSSGS
Trigger: GCTTCCCGAGGAGCCTAATCAAGCCAGCCCCTGGGC...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGGTGGGCGCGGAGAGCTaGGAGGAGCAGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVVGAES*EEQRSG
Trigger: GCCGCTGCGCTGCTCCTCTCAGCTCTCCGCGCCCAC...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGGCACAGCGGCCTTTaGTGTGTCTGCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRGHSGL*CVCSKS
Trigger: GGACTTGGAGCAGACACAGCAAAGGCCGCTGTGCCC...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTGGGAGGAAGCTGCTaGAGCCGTGACAGGCCATTT +
Preference number: 4 (lower is better)
Translates to: RGPGQASSAPPSEESQGALGGSC*SRDRPF
Trigger: AAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAG...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCAGGCTCACCCGTGACTaGCTTGTGGTGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTRLTRD*LVVWRG
Trigger: CCCTCTCCACACCACAAGCCAGTCACGGGTGAGCCT...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGCAGCTGGCCTGGACCTaGCAGGGAGAGACTGTGCGC +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQQLAWT*QGETVR
Trigger: GCGCACAGTCTCTCCCTGCCAGGTCCAGGCCAGCTG...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAATGGCAGGACTGGAGCTaGCCCAGGGGCTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWEWQDWS*PRGWLD
Trigger: ATCAAGCCAGCCCCTGGGCCAGCTCCAGTCCTGCCA...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCGGGTTCATCTGGGGGTaGGGGACAGCCTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTGFIWG*GTACSN
Trigger: GTTACTGCAGGCTGTCCCCCACCCCCAGATGAACCC...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTCTGCCTGAGTTGACCTaGATGCCTGCTGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GTGPSKQCPSIRGEPGSPLPELT*MPAESE
Trigger: CTCAGACTCAGCAGGCATTCAGGTCAACTCAGGCAG...AGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGACAACAGTTTTCGGGCTaGCATGGGGGTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRQQFSG*HGGGWS
Trigger: AGACCAGCCACCCCCATGGCAGCCCGAAAACTGTTG...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGACTCCTCCCAAATGTTaGTGGCAGCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ELARRGPGQASSAPPSEETPPKC*WQQGSR
Trigger: CCTGCTCCCCTGCTGCCAGCAACATTTGGGAGGAGT...CTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGGGCCTTTGCTGTGTCTaGTCCAAGTCCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGGLCCV*SKSSGQ
Trigger: CTGCCCGGAGGACTTGGAGCAGACACAGCAAAGGCC...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCGGGTGGGGGACAGCCTaGAGTAACTCAAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: RGPGQASSAPPSEESQGAGWGTA*SNSRNA
Trigger: GGCATTTCTTGAGTTACTGCAGGCTGTCCCCCACCC...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGGCACGGAGTACTTGGGTAGCTGTTaGAAGGTGGCCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KGGREKGWSRVRLGTGTEYLGSC*KVAAQP
Trigger: GGGCTGGGCGGCCACCTTCCAACAGCTACCCAAGTA...CTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCAGTCCTCCAAGGACATaGTCCTCAGGAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VECAWELARRGPGQASSASPPRT*SSGEAA
Trigger: TGCTGCCTCTCCTGAGGACCATGTCCTTGGAGGACT...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCATTCCCCTTTGGGGCTaGCTGAGAGGCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTIPLWG*LRGLHP
Trigger: AGGATGGAGGCCTCTCAGCCAGCCCCAAAGGGGAAT...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTGTTTTCGGGCTGCCATaGGGGTGGCTGGTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GTGPSKQCPSIRGEPGSPVFGLP*GWLVFY
Trigger: ATAGAAGACCAGCCACCCCCATGGCAGCCCGAAAAC...AGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGAATTCGCCCTCTCACTaGGGACCAGTCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GGDRAKQAVPLHQRRARENSPSH*GPVFCQ
Trigger: CTGGCAGAAGACTGGTCCCCAGTGAGAGGGCGAATT...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGTGGGTGAGGTCGTCTTaGGATCCCTACTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GGDRAKQAVPLHQRRAREWVRSS*DPYCLL
Trigger: CAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCA...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAGGGAGGGAGAAGGGCTaGAGTAGAGTGCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLGREKG*SRVRLG
Trigger: TCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCC...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCGGTCCTTCTGGGGATTaGTGTGTGATGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTGPSGD*CVMQWG
Trigger: ACCCCACTGCATCACACATCAATCCCCAGAAGGACC...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAGGCCGTGTCATTGGCTaGTGGGAGGAAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLGRVIG*WEEAAG
Trigger: TCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCC...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp AAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGGCACGGAGATGCTTCCCCCTGGCTaGGGTTTTCCAGGCATGCGT +
Preference number: 4 (lower is better)
Translates to: KGGREKGWSRVRLGTGTEMLPPG*GFPGMR
Trigger: ACGCATGCCTGGAAAACCGCAGCCAGGGGGAAGCAT...CTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCAACCGCTCTTGCAATTaGTTGCCACGAGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTNRSCN*LPRGQV
Trigger: CACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTT...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCAAGTCTGGACACCAGCTaGATCCGGCAGGACCCATCT +
Preference number: 4 (lower is better)
Translates to: WVWVQRDTWDQAVPLPHPSLDTS*IRQDPS
Trigger: AGATGGGTCCTGCCGGATCCAGCTGGTGTCCAGACT...TGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGTGCTGGAGGAGTCGCTaGACGCGTCTGTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQCWRSR*TRLCTS
Trigger: AGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCA...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGCGTGCTTGCTGGGTATaGTGGGGGTCAGGAGCTTAC +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQRACWV*WGSGAY
Trigger: GTAAGCTCCTGACCCCCATCATACCCAGCAAGCACG...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAAGTTCTCCGTGCTTCCTaGCTGGCTGGTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWEVLRAS*LAGSCS
Trigger: AGAACAGCTACCAGCCAGGCAGGAAGCACGGAGAAC...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGTGTGGACAGAGCCCCTaGTGCAAGTCTGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ELARRGPGQASSAPPSEECGQSP*CKSVLF
Trigger: GAAGAGAACAGACTTGCAGCAGGGGCTCTGTCCACA...CTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTCCTTGTTCTCATAACTaGTTCTCTCAGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GTGPSKQCPSIRGEPGSPPCSHN*FSQQPP
Trigger: GGGAGGCTGCTGAGAGAAGCAGTTATGAGAACAAGG...AGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGCCTCCATCCTGGCCATaGTCGACCCCTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVPPSWP*STPAQG
Trigger: ACCCTGGGCAGGGGTCGAGCATGGCCAGGATGGAGG...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGCAGAACCGCTCTTaGAATTGCTTGCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWELQNRS*NCLPRG
Trigger: GCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAG...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAAAGTACTCCCCGGACTaGGGATCCTGGAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLKYSPD*GSWRTF
Trigger: GAAGGTCCTCCAGGATCCGCAGTCCGGGGAGTACTT...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATGAGGCACGAGGGCCCTaGCTGAGGAAGGTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDEARGP*LRKVGA
Trigger: CGCGCCCACCTTCCTCAGGCAGGGCCCTCGTGCCTC...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATGGGCCAAGCAAGCAGTaGCCCTCCATCAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNGPSKQ*PSIRGE
Trigger: CTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCC...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAACCAGGCGGTGCCCTTaGCACACCCACCTAATTTGC +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLTRRCP*HTHLIC
Trigger: GCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAGTAGCTGTTGGAAGGTaGCCGCCCAGCCCGAATGTT +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLVAVGR*PPSPNV
Trigger: AACATTCGGGCTGGGCGGCCACCTTCCAACAGCTAC...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGAGCCGGAGGCTTGCTaGCAGTGGGCCTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVEPEAC*QWACSH
Trigger: GTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTC...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAAAAATTGCCCTGGGCTaGTCCTTAGCCAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRKIALG*SLASLP
Trigger: AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTT...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGACTGGAAGCTGCAGGTaGCTGCCGTGCTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRTGSCR*LPCWVS
Trigger: TGAAACCCAGCACGGCAGGCACCTGCAGCTTCCAGT...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGATGTGTCCTCGGAGATaGACAAACTCCGGAATGCCC +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGMCPRR*TNSGMP
Trigger: GGGCATTCCGGAGTTTGTGCATCTCCGAGGACACAT...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGGTAACTGGCTCCAAATaGCACTTTTCCTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GGDRAKQAVPLHQRRAREVTGSK*HFSSGC
Trigger: ACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTAC...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGCTTGGGACCAGGCGGTaGCCTTGCCACACCCACCTA +
Preference number: 4 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVLGTRR*PCHTHL
Trigger: TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAG...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGCTCTCACAACGTTaGCTCTCGGTCCTGTCGAAA +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWELLSQR*LSVLSK
Trigger: TTTCGACAGGACCGAGAGCCAACGTTGTGAGAGCAG...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCAAAGGTGGGCCTCTCTaGTTGGTCTGTGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VECAWELARRGPGQASSAKGGPL*LVCVFS
Trigger: AGAAAAGACACAGACCAACCAGAGAGGCCCACCTTT...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCTGGGCTCCTTCTCTTaGTATCCGTTTAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTLGSFS*YPFSCP
Trigger: AGGACAGCTAAACGGATACCAAGAGAAGGAGCCCAG...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGCTCCTGTCTTCCCGCTaGTTCTCAGTAAACCACATC +
Preference number: 4 (lower is better)
Translates to: ELARRGPGQASSAPPSEELLSSR*FSVNHI
Trigger: GATGTGGTTTACTGAGAACCAGCGGGAAGACAGGAG...CTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGTTTCTCTGTTTTGGGTaGGACTGCAGGTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ELARRGPGQASSAPPSEEFLCFG*DCRWLA
Trigger: AGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAA...CTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAGGGCTTTCTCTGTTTTaGGTGGGACTGCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLGLSLF*VGLQVA
Trigger: AGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCC...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTCCTCTGGGTTCATCTaGGGGTGGGGGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVSSGFI*GWGTAC
Trigger: GCAGGCTGTCCCCCACCCCCAGATGAACCCAGAGGA...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAAATGAGGCAAAGGATTaGTCTGAAGAGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRNEAKD*SEELVL
Trigger: CAGCACCAGCTCTTCAGATCAATCCTTTGCCTCATT...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAAATTAGCTTCCTCTGCTaGTGCCTTCCTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWEISFLC*CLPGSS
Trigger: GGAAGAACCAGGAAGGCATCAGCAGAGGAAGCTAAT...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATCAAGGAGCTTACAAGTaGGTGGGTGGGTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNQGAYK*VGGCGY
Trigger: GTACCCACACCCACCCACTCACTTGTAAGCTCCTTG...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGCTTAAGGCACAGTACTaGAGCTCATCCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGLKAQY*SSSFRI
Trigger: GATGCGGAAGGATGAGCTGCAGTACTGTGCCTTAAG...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGTGCCACGAGGCCAGGTaGAGCATCTGGTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVCHEAR*SIWWCL
Trigger: AAGGCACCACCAGATGCTGCACCTGGCCTCGTGGCA...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCCTGCAGAGTGCGGGGTaGAGTCACCGTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTLQSAG*SHREAL
Trigger: CAGGGCCTCACGGTGACTGCACCCCGCACTCTGCAG...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGTCATTTCTGCAAAATTaGCCTGGGCTGGTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: ELARRGPGQASSAPPSEESFLQN*PGLVLS
Trigger: GCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGA...CTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGTCTCTGTTACAGCACTaGAAGCTGCAGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRSLLQH*KLQVPA
Trigger: GGCAGGCACCTGCAGCTTCCAGTGCTGTAACAGAGA...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAAGTGACAGGCCATTTCTaGATTCTTGGAGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWEVTGHF*ILGGLL
Trigger: CAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCAC...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGACTTAGAAAGCTCATTTaGAGGGCTTTCCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRLRKLI*RAFLKP
Trigger: GGGCTTGAGGAAAGCCCTCCAAATGAGCTTTCTAAG...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGGCACGGAGGCTGTAGGGTCCTTCTaGGGATTGATGTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: KGGREKGWSRVRLGTGTEAVGSF*GLMCDA
Trigger: TGCATCACACATCAATCCCCAGAAGGACCCTACAGC...CTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATGAGAGGCCTCCATCCTaGCCATGCTCGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDERPPS*PCSTPA
Trigger: GGCAGGGGTCGAGCATGGCCAGGATGGAGGCCTCTC...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTAGTCGGGGCCTCTCTCTaGGGCACAGCGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ALGVCSSRSLQVSGWVWVVGASL*GTAAFA
Trigger: AGCAAAGGCCGCTGTGCCCCAGAGAGAGGCCCCGAC...TACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGGTCTTGATTTTCACCTaGAGTGGCAAGTCGAAGACA +
Preference number: 4 (lower is better)
Translates to: GGDRAKQAVPLHQRRAREVLIFT*SGKSKT
Trigger: TGTCTTCGACTTGCCACTCCAGGTGAAAATCAAGAC...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCATACTTGCCCGTCTCTaGGTCATAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RGPGQASSAPPSEESQGAILARL*VIEGLD
Trigger: ATCAAGACCTTCTATGACCCAGAGACGGGCAAGTAT...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGGGAGTAGAGTGCGCCTaGGAACTGGCACGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRGVECA*ELARRG
Trigger: TCCCCTCCGTGCCAGTTCCCAGGCGCACTCTACTCC...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAACTAGAGCCTCTCATTaGCCAGATGCAATTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRTRASH*PDAIAK
Trigger: CTTTGCAATTGCATCTGGTCAATGAGAGGCTCTAGT...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGCAAACACCTGTCGGGTaGTATCCGGGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVQTPVG*YPGTQP
Trigger: TGGCTGTGTCCCCGGATATCACCCGACAGGTGTTTG...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGGAAGCTGCAGGTGCCTaGCGTGCTGGGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVEAAGA*RAGFQD
Trigger: ATCCTGAAACCCAGCACGGCAGGCACCTGCAGCTTC...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGCCCGGTCTGTTAGGCTaGTCACCTCCCTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVPGLLG*SPPCLH
Trigger: ATGCAGACAGGGAGGTGAGCAGCCTAACAGACCGGG...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGAGCCCGAATGTTCCGTaGCCTGTGACGGTAACTGGC +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVSPNVP*PVTVTG
Trigger: GCCAGTTACCGTCACAGGGCACGGAACATTCGGGCT...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATTCAGAGCCGGAGGCTTaGTGGCAGTGGGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDSEPEA*WQWACS
Trigger: AGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGA...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTGTGTTCTGAAGTCCTaGTTCCCTCTCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGCVLKS*FPLRFC
Trigger: ACAGAACCTGAGAGGGAAGCAGGACTTCAGAACACA...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGCCTTTCTCTTTGCAATaGTTCCCCCTGGCTGCGGTT +
Preference number: 4 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRPFSLQ*FPLAAV
Trigger: AACCGCAGCCAGGGGGAAGCATTGCAAAGAGAAAGG...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGCTTTCCCTTTCTCTTTaGAATGCTTCCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQLSLSL*NASPWL
Trigger: CAGCCAGGGGGAAGCATTGCAAAGAGAAAGGGAAAG...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCTGCAGCATCTGGTGGTaGCTTCACCCGGTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTCSIWW*LHPVPL
Trigger: GAGGGGGACCGGGTGAAGGCACCACCAGATGCTGCA...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATTCTCCCAGAGGTGCCTaGTGGGCTGGTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDSPRGA*WAGGHI
Trigger: GATGTGGCCACCAGCCCAGCAGGCACCTCTGGGAGA...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGTTGACTCACATAAGGTaGCCGTGTCATTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQLTHIR*PCHWLL
Trigger: CAGCAGCCAATGACACGGCCACCTTATGTGAGTCAA...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCAGAGACTGACATTCACTaGGCTCCTTCTCTTGGTATC +
Preference number: 4 (lower is better)
Translates to: WVWVQRDTWDQAVPLPHPETDIH*APSLGI
Trigger: GATACCAAGAGAAGGAGCCCAGTGAATGTCAGTCTC...TGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATCACCAGAGGCATAGATaGGAAATTCCCCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNHQRHR*EIPLWG
Trigger: GCCCCAAAGGGGAATTTCCCATCTATGCCTCTGGTG...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATAGGTGCAGCATCTGGTaGTGCCTTCACCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDRCSIW*CLHPVP
Trigger: GGGGACCGGGTGAAGGCACCACCAGATGCTGCACCT...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGCCTCGGGTAAAGCAATaGTGGGGATGTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVPRVKQ*WGCAMG
Trigger: CCCCATGGCACATCCCCACCATTGCTTTACCCGAGG...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGGGAAGTAAGCTCCTCTaGGTTCATCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVGSKLL*VHLGVG
Trigger: CCCCACCCCCAGATGAACCCAGAGGAGCTTACTTCC...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGCAGCGGGCACCCTCCTaGCTGTCAGAAAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRQRAPS*LSERQN
Trigger: ATTCTGCCTTTCTGACAGTCAGGAGGGTGCCCGCTG...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGAAGCTGCTGGAGCCGTaGCAGGCCATTTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVKLLEP*QAISGF
Trigger: GAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTT...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGGCCCATTGGGGAGGATaGCACCGTTGCTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRAHWGG*HRCSQV
Trigger: AACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGC...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCTCCCATTCTGTGCAAATaGTCATTTCTGCAAAATTGC +
Preference number: 4 (lower is better)
Translates to: GTGPSKQCPSIRGEPGSPPILCK*SFLQNC
Trigger: GCAATTTTGCAGAAATGATCATTTGCACAGAATGGG...AGGGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCACTTCTTATTTCCTTaGATCATCTGTTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GGDRAKQAVPLHQRRAREHFLFP*IICWLQ
Trigger: TTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTG...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTGGAGACAGGCTTATTaGTGCTCCTTAGGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNWRQAY*CSLGRK
Trigger: TTTCCGGCCTAAGGAGCAGCAATAAGCCTGTCTCCA...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGGCAGAAAGGTACCTTTaGCTCTCCCAGGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRAERYL*LSQAHP
Trigger: CGGGTGAGCCTGGGAGAGGCAAAGGTACCTTTCTGC...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGTGTTCTCTTCCTGACTaGAGCTGGCCTGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRCSLPD*SWPGPG
Trigger: GCCAGGTCCAGGCCAGCTGCAGTCAGGAAGAGAACA...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGGGACAGAGCCCCTGCTaGAAGTCTGTTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVGQSPC*KSVLFL
Trigger: CAGGAAGAGAACAGACTTGCAGCAGGGGCTCTGTCC...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGAGAGGGAGGAAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAAGCAAATGATCATTTCTaGAAAATTGCCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEGGREGGRRAGVECAWEANDHF*KIALGW
Trigger: CCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC...TTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTTCCTCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGGAGCTTTGCTTTCTaGGACGGTTCCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVGSFAF*DGSSCV
Trigger: GACACAGCTGGAACCGTCCCAGAAAGCAAAGCTCCC...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGACTTACCTTTGAGGCTTaGCATAAAATCGGATTGGCT +
Preference number: 4 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRLTFEA*HKIGLA
Trigger: AGCCAATCCGATTTTATGCCAAGCCTCAAAGGTAAG...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCGGTCCTCCAGGGGCCTaGGAAGACTCCTCCCAAATG +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTGPPGA*EDSSQM
Trigger: CATTTGGGAGGAGTCTTCCCAGGCCCCTGGAGGACC...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGCTTAGCCAGTCTGCCTaGGTTGACCTGAATGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRLSQSA*VDLNAC
Trigger: GCAGGCATTCAGGTCAACTCAGGCAGACTGGCTAAG...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCCATCATCCAACACGCTaGCGATGCTGGAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTHHPTR*RCWRSR
Trigger: GCGACTCCTCCAGCATCGGCAGCGTGTTGGATGATG...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCATTGCTCACAGGTTCTTaGTTTCCATCAACCTTACCT +
Preference number: 4 (lower is better)
Translates to: WVWVQRDTWDQAVPLPHPLLTGS*FPSTLP
Trigger: AGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAA...TGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTTGAAACCTGGTGTTTaGTCTTCCCAACAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGLKPGV*SSQQFS
Trigger: CGAAAACTGTTGGGAAGAGCAAACACCAGGTTTCAA...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTATCTTGGGATCCCTACTaGCTTCTGGACTTTATGGAT +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLSWDPY*LLDFMD
Trigger: ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGA...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGCCGGGGGAAACCAAATaGTGTTCTTGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVPGETK*CSWWGR
Trigger: TCTTCCCCACCAAGAACACCATTTGGTTTCCCCCGG...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATAATCAGGTTGTGAGCTaGGAGCTTTTCCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNNQVVS*ELFLPQ
Trigger: CTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATT...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATGTTCGCTCTGCTGGCTaGCTGTCTGCTGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDVRSAG*LSAESR
Trigger: CCTGGATTCAGCAGACAGCCAGCCAGCAGAGCGAAC...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCTGCCTGCTGGGCTGGTaGCCACATCCAGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTCLLGW*PHPAMN
Trigger: GTTCATTGCTGGATGTGGCCACCAGCCCAGCAGGCA...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCTCCCAGGCTCACCCGTaGCTGGCTTGTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLASQAHP*LACGVE
Trigger: CTCCACACCACAAGCCAGTCACGGGTGAGCCTGGGA...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTTGGCTGGCTGTCTGCTaGATCCAGGGCGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ANDHFCKIALGWSLASLPWLAVC*IQGVLA
Trigger: AGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCA...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGCAGCAGCCTCCCCATTaGCATAGAAGGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGQQPPH*HRRGLW
Trigger: CCAAAGCCCCCTTCTATGTCAATGGGGAGGCTGCTG...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp ACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGAACCACATCTTCTGCTaGTCATCAAATGAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TRRCPCHTHLICRAREEQNHIFC*SSNEAK
Trigger: CTTTGCCTCATTTGATGATCAGCAGAAGATGTGGTT...CTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCGCCCAGGGTCCTCCATaGCCTCGTTGGCCATGCACT +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLAAQGPP*PRWPCT
Trigger: AGTGCATGGCCAACGAGGTCATGGAGGACCCTGGGC...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGCCCTTTGGGGCTGGCTaGGAGGCCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWPFGAG*EASILA
Trigger: GGCCAGGATGGAGGCCTCTCAGCCAGCCCCAAAGGG...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTACTCTCATTGACCAGATaGAATTGCAAAGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLLSLTR*NCKVGI
Trigger: AATCCCCACTTTGCAATTGCATCTGGTCAATGAGAG...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGAGTGCTTGGGAGCTTTaGTTTCTGGGACGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRSAWEL*FLGRFQ
Trigger: CTGGAACCGTCCCAGAAAGCAAAGCTCCCAAGCACT...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTTTTCCAGGCATGCGTaGCCATTGCTTAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVFSRHA*PLLKAQ
Trigger: CTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAA...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGGCTCTTGCAATTGCTTaGCACGAGGCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGALAIA*HEARCS
Trigger: GCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGC...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGGGCTGGAGTAGAGTaGGCCTGGGAACTGGCACGG +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLARAGVE*AWELAR
Trigger: CCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCT...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATTCCGTGCTTCCTGCCTaGCTGGTAGCTGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDSVLPA*LVAVLM
Trigger: CATCAGAACAGCTACCAGCCAGGCAGGAAGCACGGA...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCCCCGTGACTGGCTTGTaGTGTGGAGAGGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTPVTGL*CGEGNF
Trigger: AAAGTTCCCCTCTCCACACCACAAGCCAGTCACGGG...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGTGTTCCCTGGAGTCTaGACACCAGCTGGATCCGGC +
Preference number: 4 (lower is better)
Translates to: ANDHFCKIALGWSLASLPVFPGV*TPAGSG
Trigger: GCCGGATCCAGCTGGTGTCCAGACTCCAGGGAACAC...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTATGCAATGCTTCCCCCTaGCTGCGGTTTTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALGVCSSRSLQVSGWVWVCNASP*LRFSRH
Trigger: ATGCCTGGAAAACCGCAGCCAGGGGGAAGCATTGCA...TACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTCCCAGAGGTGCCTGCTaGGCTGGTGGCCACATCCAG +
Preference number: 4 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPPRGAC*AGGHIQ
Trigger: CTGGATGTGGCCACCAGCCCAGCAGGCACCTCTGGG...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCGTCACGGGCACTGGCTaGAAGCCGGGGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLAVTGTG*KPGYST
Trigger: TGTGCTGTACCCCGGCTTCCAGCCAGTGCCCGTGAC...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGGGCCACATCCAGCAATaGACCTCTTGGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGGHIQQ*TSWREG
Trigger: ACCCTCTCTCCAAGAGGTTCATTGCTGGATGTGGCC...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGTGGGGACCAGTCTTCTaGCAGGGGGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWWGPVF*QGALLW
Trigger: CCAGAGCAGGGCCCCCTGGCAGAAGACTGGTCCCCA...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTACTTGCCAGCTTCTTTaGCCGCCGCAGGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ANDHFCKIALGWSLASLPTCQLL*PPQGFL
Trigger: GAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGT...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCTTTTATGCTTATATTTaGTGTCATCACTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTFYAYI*CHHCPS
Trigger: AGATGGGCAGTGATGACACCAAATATAAGCATAAAA...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATATGCCACTTTTCCTCTaGGTGTGGCCCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDMPLFL*VWPTVL
Trigger: GAGAACAGTGGGCCACACCCAGAGGAAAAGTGGCAT...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATTGTTCTGATGGGTGTTaGAAACTTCAGCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDCSDGC*KLQRAP
Trigger: GGGTGCCCGCTGAAGTTTCCAACACCCATCAGAACA...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGAGGAGAGAGGGGCCCTaGGAAGAATTTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRRREGP*EEFLVQ
Trigger: TTGAACCAGAAATTCTTCCCAGGGCCCCTCTCTCCT...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCTCCTTCTCATCCTTCTaGCTGTCACCTGCACTCACA +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTSFSSF*LSPALT
Trigger: TGTGAGTGCAGGTGACAGTCAGAAGGATGAGAAGGA...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCTGCTGGCAGTGGGCCTaGTCTCACAACGTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLACWQWA*SHNVGS
Trigger: AGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCA...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGCCTTGCATCATCTGTTaGCTCCAAGAAAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRPCIIC*LQESCP
Trigger: AGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGG...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAATCCCACACGAGGGCGTaGGTCAGGTCCTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKSHTRA*VRSSLR
Trigger: CCGGAGGGAGGACCTGACCCACGCCCTCGTGTGGGA...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGGGACTGCAGGTaGCTTGCTTGCTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCGWDCR*LACCPL
Trigger: GAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCC...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGAATCGAAGCAGAAGTTaGCACTGTTTTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVNRSRS*HCFLEE
Trigger: CTCTTCCAGAAAACAGTGTCAACTTCTGCTTCGATT...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTTGGTGGGCATTCCATaGCTCAAAAGCACTATTTTC +
Preference number: 4 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVLVGIP*LKSTIF
Trigger: GAAAATAGTGCTTTTGAGTCATGGAATGCCCACCAA...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATGGGGGCTGGGCTaGCTTCTCTTGAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCPWGLG*LLLRIR
Trigger: CCTGATTCTCAAGAGAAGCCAGCCCAGCCCCCATGG...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp AAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTGGGCTGCCATGGGGGTaGCTGGTCTTCTATGTCACC +
Preference number: 4 (lower is better)
Translates to: KETHSVQMIISAKLPWAGGLPWG*LVFYVT
Trigger: GGTGACATAGAAGACCAGCCACCCCCATGGCAGCCC...ACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTCAGGGGGCCCTGCTCTaGGTGTGGACAAAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPQGALL*VWTKSD
Trigger: GTCACTTTTTGTCCACACCCAGAGCAGGGCCCCCTG...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTGATGATGCCCAGGCCTaGAGCTTCTACACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPDDAQA*SFYTLL
Trigger: GAGGAGGGTGTAGAAGCTCCAGGCCTGGGCATCATC...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTAGCCAGGGAGCCCTTTaGGTGAGGTCGTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPSQGAL*VRSSWD
Trigger: ATCCCAAGACGACCTCACCCAAAGGGCTCCCTGGCT...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGAATCCAGGGCGTaGTTGCTGGGTATGATGGGG +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWAESRA*LLGMMG
Trigger: CCCCATCATACCCAGCAAGCACGCCCTGGATTCAGC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAGAGGCTTGCTGGCAGTaGGCCTGCTCTCACAACGTT +
Preference number: 4 (lower is better)
Translates to: GKFLPVKETHSVQMIISAEACWQ*ACSHNV
Trigger: AACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTC...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATTTTTGTATACAAAGGTaGGCCTCTCTGGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDFCIQR*ASLVGL
Trigger: CAGACCAACCAGAGAGGCCCACCTTTGTATACAAAA...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGGATCATAATGTTCATTaGGTTCCACAGGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRDHNVH*VPQAGQ
Trigger: TTGACCTGCCTGTGGAACCCAATGAACATTATGATC...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTACCCCATTCTGGCCTTaGCAATTCCTCCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ANDHFCKIALGWSLASLPTPFWP*QFLLFV
Trigger: CACAAAGAGGAGGAATTGCCAAGGCCAGAATGGGGT...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATGTGACTCTTGAAACCTaGTGTTTGCTCTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDVTLET*CLLFPT
Trigger: TGTTGGGAAGAGCAAACACCAGGTTTCAAGAGTCAC...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCATGTAGTCCAGACTCGTaGACACTCTGGGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GKFLPVKETHSVQMIISACSPDS*TLWVLA
Trigger: CGCCAGGACCCAGAGTGTCCACGAGTCTGGACTACA...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTACAGAGGACAAAAAGTGACTCTTaGAACCTGGTGTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GVCSSRSLQVSGWVWVQRTKSDS*NLVFAL
Trigger: AAGAGCAAACACCAGGTTTCAAGAGTCACTTTTTGT...CCTCTGTACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp AAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTACGGGATGGAGACCTTaGCATACTTGCCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KETHSVQMIISAKLPWAGTGWRP*HTCPSL
Trigger: CAGAGACGGGCAAGTATGTCAAGGTCTCCATCCCGT...ACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCGCAAGTTTCTCCCTGTaGAGGAAACCCATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLAASFSL*RKPILC
Trigger: GCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGC...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCTGCTGGGAGGAAGCTaGTGGAGCCGTGACAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLPVKETHSVQMIISAKLLLGGS*WSRDRP
Trigger: TGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAG...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGGACTGCAGGTGGCTTaGTTGCTGTCCTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWGLQVA*LLSSLA
Trigger: AGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCGGGGCCTTAGGGGTTTaGTCATCAAGGAGCTTACAA +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLAGALGV*SSRSLQ
Trigger: TTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCC...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTGCCTGCCGTGCTaGGTTTCAGGATCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCRCLPC*VSGSVV
Trigger: AACTACAGATCCTGAAACCCAGCACGGCAGGCACCT...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTCTCCCTGAACGTACTTaGGTAGCTGTTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPLPERT*VAVGRW
Trigger: CCACCTTCCAACAGCTACCCAAGTACGTTCAGGGAG...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTCCATTTCTGGATTCTTaGAGGACTCCTGTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ANDHFCKIALGWSLASLPPFLDS*RTPVLR
Trigger: ACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGG...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGCCTTCTGGACTTTATGGATCTAAAAAGGCTAAGTATGTGTTGATGATCGTGCTTTGGCTTCCTCCATaGGGGCTGGGCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPSGLYGSKKAKYVLMIVLWLPP*GLGWLL
Trigger: GAGAAGCCAGCCCAGCCCCCATGGAGGAAGCCAAAG...CACGATCATCAACACATACTTAGCCTTTTTAGATCCATAAAGTCCAGAAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAACCTCCCAAATGTTGCTaGCAGCAGGGGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKPPKCC*QQGSRH
Trigger: GTGCCTGCTCCCCTGCTGCCAGCAACATTTGGGAGG...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGCCTTCTGGACTTTATGGATCTAAAAAGGCTAAGTATGTGTTGATGATCGTGAGGTGCCTGCTGGGCTaGTGGCCACATCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LPSGLYGSKKAKYVLMIVRCLLG*WPHPAM
Trigger: CATTGCTGGATGTGGCCACCAGCCCAGCAGGCACCT...CACGATCATCAACACATACTTAGCCTTTTTAGATCCATAAAGTCCAGAAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGCCTTCTGGACTTTATGGATCTAAAAAGGCTAAGTATGTGTTGATGATCGTGGTACAGAGGGACACTTaGGACCAGGCGGTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPSGLYGSKKAKYVLMIVVQRDT*DQAVPL
Trigger: CAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTAC...CACGATCATCAACACATACTTAGCCTTTTTAGATCCATAAAGTCCAGAAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTTTCAAATGTGTGTTCTaGAGTCCTGCTTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ANDHFCKIALGWSLASLPFKCVF*SPASLS
Trigger: TGAGAGGGAAGCAGGACTTCAGAACACACATTTGAA...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGGGCTGCCAGCTTCCCTaGGTCTGCAGAACCGCTCTT +
Preference number: 4 (lower is better)
Translates to: FLPVKETHSVQMIISAKLGCQLP*VCRTAL
Trigger: AAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCC...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGGCATGCGTGCCCATTaGTTAAGGCACAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWGMRAH*LRHSTA
Trigger: TGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGTGTTTTGGGTGGGACTaGAGGTGGCTTGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWCFGWD*RWLACC
Trigger: ACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACA...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCTTAGTGTTGATACTTTaGAGACAGGCTTATTGCTGC +
Preference number: 4 (lower is better)
Translates to: HFCKIALGWSLASLPELTLVLIL*RQAYCC
Trigger: GCAGCAATAAGCCTGTCTCCAAAGTATCAACACTAA...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCGAAGAGGAGCGAATTTaGGAGGATTTTTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PFCANDHFCKIALGWSLAEEERI*EDFSEP
Trigger: CGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTC...GGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCGTGTCATTGGCTGCTaGGAGGAAGCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLPVKETHSVQMIISAKLRVIGC*EEAAGA
Trigger: GGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACG...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAATTCCTCCTCTTTGTaGCCACTGCTGAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GKFLPVKETHSVQMIISANSSSL*PLLRES
Trigger: GGACTCCCTCAGCAGTGGCCACAAAGAGGAGGAATT...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGGATTTTCACCTGGAGTaGCAAGTCGAAGACAAAGTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGDFHLE*QVEDKV
Trigger: TACTTTGTCTTCGACTTGCCACTCCAGGTGAAAATC...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCACCCACTGTTCTCTGGTaGAAAGTCCCAAACACCTGT +
Preference number: 4 (lower is better)
Translates to: GKFLPVKETHSVQMIISAPTVLW*KVPNTC
Trigger: ACAGGTGTTTGGGACTTTTCACCAGAGAACAGTGGG...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTACTTTTCCTCTCCCTaGACGTACTTGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPYFSSP*TYLGSC
Trigger: ACAGCTACCCAAGTACGTTCAGGGAGAGGAAAAGTA...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGCCCTGTGACGGTAACTaGCTCCAAATGCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWPCDGN*LQMPLF
Trigger: GAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGG...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGTCCAGCAGCTTTGGTTaGTGGGCATTCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWSSSFG*WAFHDS
Trigger: TGAGTCATGGAATGCCCACCAACCAAAGCTGCTGGA...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCCTCTCTGGTTaGTCTGTGTCTTTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCVGLSG*SVSFLL
Trigger: TAGAAGAAAAGACACAGACCAACCAGAGAGGCCCAC...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGGACAAAAAGTaGCTCTTGAAACCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCGVDKK*LLKPGV
Trigger: AACACCAGGTTTCAAGAGTCACTTTTTGTCCACACC...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGGTCATAGAAGGTCTTaGTTTTCACCTGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWGHRRS*FSPGVA
Trigger: TGCCACTCCAGGTGAAAATCAAGACCTTCTATGACC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCAGCTTTGGTTGGTaGGCATTCCATGACTCAAAA +
Preference number: 4 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCSSFGW*AFHDSK
Trigger: TTTTGAGTCATGGAATGCCCACCAACCAAAGCTGCT...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR GCA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAAGACAGGCTTATTGCTaGTCCTTAGGCCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKRQAYC*SLGRKL
Trigger: CAGTTTCCGGCCTAAGGAGCAGCAATAAGCCTGTCT...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGTTGACACTGTTTTCTaGAAGAGGAGCGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: PVKETHSVQMIISAKLPWVDTVF*KRSEFG
Trigger: CCCAAATTCGCTCCTCTTCCAGAAAACAGTGTCAAC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CTGCCTTCTGGACTTTATGGATCTAAAAAGGCTAAGTATGTGTTGATGATCGTGTGTCCCCATAGTGCTTaGGAGCTTTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPSGLYGSKKAKYVLMIVCPHSA*ELCFLG
Trigger: TCCCAGAAAGCAAAGCTCCCAAGCACTATGGGGACA...CACGATCATCAACACATACTTAGCCTTTTTAGATCCATAAAGTCCAGAAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGATCCTCACCCCATTCTaGCCTTGGCAATTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLPVKETHSVQMIISAKLILTPF*PWQFLL
Trigger: GAGGAGGAATTGCCAAGGCCAGAATGGGGTGAGGAT...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR TCA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAAAGGTCTTTGGCCTGTaGAAAGGTTGTGCCCTTATT +
Preference number: 4 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKKVFGL*KGCALI
Trigger: AATAAGGGCACAACCTTTTCACAGGCCAAAGACCTT...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGACCAAATGGTGTTCTTaGTGGGGAAGAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: FLPVKETHSVQMIISAKLTKWCS*WGRGKQ
Trigger: CTGTTTGCCTCTTCCCCACCAAGAACACCATTTGGT...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CCA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAAAGAAATGCCTTCTGTaGCAAAGTCCTCTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKKKCLL*QSPLGH
Trigger: ATGACCTAGAGGACTTTGCCACAGAAGGCATTTCTT...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp GGCCGCCTCCCGACAGGCTCCGAGAAGCCGGACACGGAGTGGCGGTaGACGGGAGGGGGCAGGGAACGGACCACGGGGAAATTGTGTCGG +
Preference number: 5 (lower is better)
Translates to: GRLPTGSEKPDTEWR*TGGGRERTTGKLCR
Trigger: CCGACACAATTTCCCCGTGGTCCGTTCCCTGCCCCCTCCCGTGCACCGCCACTCCGTGTCCGGCTTCTCGGAGCCTGTCGGGAGGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp ACCCTCCTCTCCTGGGCTCTGGGGAGGACCATGAGGGCGCTGGCCTaGAGAGTGCGGGGTGCAGTCACCGTGAGGCCCTGGGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLLSWALGRTMRALA*RVRGAVTVRPWVQL
Trigger: CAGCTGGACCCAGGGCCTCACGGTGACTGCACCCCGCACTCTGCAGGCCAGCGCCCTCATGGTCCTCCCCAGAGCCCAGGAGAGGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GACAGCTCAAGTAGGGGGTCAGAGCCGCCCTCCCACACGAGGGCGTaGGTCAGGTCCTCCCTCCGGGTGACCCTGGCAGGACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: DSSSRGSEPPSHTRA*VRSSLRVTLAGLEL
Trigger: CAGCTCCAGTCCTGCCAGGGTCACCCGGAGGGAGGACCTGACCCACGCCCTCGTGTGGGAGGGCGGCTCTGACCCCCTACTTGAGCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp GGCTCTGGGGAGGACCATGAGGGCGCTGGCCTGCAGAGTGCGGGGTaGAGTCACCGTGAGGCCCTGGGTCCAGCTGTAGTCCAGACTCGT +
Preference number: 5 (lower is better)
Translates to: GSGEDHEGAGLQSAG*SHREALGPAVVQTR
Trigger: ACGAGTCTGGACTACAGCTGGACCCAGGGCCTCACGGTGACTGCACCCCGCACTCTGCAGGCCAGCGCCCTCATGGTCCTCCCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GTACAGCACATAGGGAGCGGCCAGGGCGTCCGGTGGGGGCGGCTCTaGGGAGGCCCCCTCGGAGGACGGGATGGAGACCTTGACATACTT +
Preference number: 5 (lower is better)
Translates to: VQHIGSGQGVRWGRL*GGPLGGRDGDLDIL
Trigger: AAGTATGTCAAGGTCTCCATCCCGTCCTCCGAGGGGGCCTCCCCAGAGCCGCCCCCACCGGACGCCCTGGCCGCTCCCTATGTGCTGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCACCCGTGACTGGCTaGTGGTGTGGAGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: RVRLGTGTEGTGPSKQCPSPVTG*WCGEGN
Trigger: GTTCCCCTCTCCACACCACAAGCCAGTCACGGGTGA...GGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCAAGGTGGCCGTGTCATaGGCTGCTGGGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RGPGQASSAPPSEESQGAKVAVS*AAGRKL
Trigger: CAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTT...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGGAATCCAGGGCGTGCTaGCTGGGTATGATGGGGGTC +
Preference number: 5 (lower is better)
Translates to: GGDRAKQAVPLHQRRAREESRAC*LGMMGV
Trigger: GACCCCCATCATACCCAGCAAGCACGCCCTGGATTC...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCCGCACGTCCTTGAGGTaGAACAGCAGGCTAGGGGCT +
Preference number: 5 (lower is better)
Translates to: RGPGQASSAPPSEESQGARTSLR*NSRLGA
Trigger: AGCCCCTAGCCTGCTGTTCAACCTCAAGGACGTGCG...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCATGGGAAATTCCCCTTaGGGGCTGGCTGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RVRLGTGTEGTGPSKQCPMGNSP*GLAERP
Trigger: AGGCCTCTCAGCCAGCCCCAAAGGGGAATTTCCCAT...GGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCCCAGCAATGAACCTCTaGGAGAGAGGGTCCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RVRLGTGTEGTGPSKQCPPAMNL*ERGSGG
Trigger: ACCTCCGGACCCTCTCTCCAAGAGGTTCATTGCTGG...GGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCGGGACTGCAGGTGGCTaGCTTGCTGTCCTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: RGPGQASSAPPSEESQGAGTAGG*LAVLSS
Trigger: GCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCC...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp TTGTGTCGGGGCCTCTCTCTGGGGCACAGCGGCCTTTGCTGTGTCTaGTCCAAGTCCTCCGGGCAGGGCTTTCCCTCCTGTGACTCGCCA +
Preference number: 5 (lower is better)
Translates to: LCRGLSLGHSGLCCV*SKSSGQGFPSCDSP
Trigger: TGGCGAGTCACAGGAGGGAAAGCCCTGCCCGGAGGACTTGGAGCAGACACAGCAAAGGCCGCTGTGCCCCAGAGAGAGGCCCCGACACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGTGCAGAAAGGTACCTTaGCCTCTCCCAGGCTCACCC +
Preference number: 5 (lower is better)
Translates to: GGDRAKQAVPLHQRRARECRKVP*PLPGSP
Trigger: GGGTGAGCCTGGGAGAGGCAAAGGTACCTTTCTGCA...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGACTCCTCCCAAATGTaGCTGGCAGCAGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRDSSQM*LAAGEQ
Trigger: CTGCTCCCCTGCTGCCAGCAACATTTGGGAGGAGTC...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTTGGGTGAGGTCGTCTaGGGATCCCTACTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RVRLGTGTEGTGPSKQCPLGEVV*GSLLPS
Trigger: AGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAA...GGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GTAGAGTGCGCCTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCTCCTCCATGACCTCGTaGGCCATGCACTTCACACGT +
Preference number: 5 (lower is better)
Translates to: VECAWELARRGPGQASSASSMTS*AMHFTR
Trigger: ACGTGTGAAGTGCATGGCCAACGAGGTCATGGAGGA...GGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAGGCGCACTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCTCTTCCTCCTCTTACTaGCCAGCTTCTTTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RGPGQASSAPPSEESQGASSSSY*PASLPA
Trigger: GGCGGGCAAAGAAGCTGGCAAGTAAGAGGAGGAAGA...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CTGGGAACTGGCACGGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGTGGAGAGGGGAACTTaGACTCACATAAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: LGTGTEGTGPSKQCPSIRVERGT*THIRWP
Trigger: CGGCCACCTTATGTGAGTCAAAGTTCCCCTCTCCAC...TCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCCGTGCCAGTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATGGTACAGAGGGACACTaGGGACCAGGCGGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNGTEGH*GPGGAL
Trigger: AAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACC...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp AAGTCTCCCAGAGGTGCCTGCTGGGCTGGTGGCCACATCCAGCAATaGACCTCTTGGAGAGAGGGTCCGGAGGTCTTCTGCCGACAGCTC +
Preference number: 5 (lower is better)
Translates to: KSPRGACWAGGHIQQ*TSWREGPEVFCRQL
Trigger: GAGCTGTCGGCAGAAGACCTCCGGACCCTCTCTCCAAGAGGTTCATTGCTGGATGTGGCCACCAGCCCAGCAGGCACCTCTGGGAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp ATGGGGCTGCCAGCTTCCCTGAGTCTGCAGAACCGCTCTTGCAATTaGTTGCCACGAGGCCAGGTGCAGCATCTGGTGGTGCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: MGLPASLSLQNRSCN*LPRGQVQHLVVPSP
Trigger: GGGTGAAGGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp TGTGCCATGGGGCTGCCAGCTTCCCTGAGTCTGCAGAACCGCTCTTaGAATTGCTTGCCACGAGGCCAGGTGCAGCATCTGGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: CAMGLPASLSLQNRS*NCLPRGQVQHLVVP
Trigger: AGGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCCATGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp AAGCCTCAGGGAGAGGTGTTTCCTGGGGCGGTGTTCCCTGGAGTCTaGACACCAGCTGGATCCGGCAGGACCCATCTCCAACTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KPQGEVFPGAVFPGV*TPAGSGRTHLQLSF
Trigger: GAAGGAGAGTTGGAGATGGGTCCTGCCGGATCCAGCTGGTGTCCAGACTCCAGGGAACACCGCCCCAGGAAACACCTCTCCCTGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GCTGTGCAGGAAGCTCAAGTCTCCCAGAGGTGCCTGCTGGGCTGGTaGCCACATCCAGCAATGAACCTCTTGGAGAGAGGGTCCGGAGGT +
Preference number: 5 (lower is better)
Translates to: AVQEAQVSQRCLLGW*PHPAMNLLERGSGG
Trigger: ACCTCCGGACCCTCTCTCCAAGAGGTTCATTGCTGGATGTGGCCACCAGCCCAGCAGGCACCTCTGGGAGACTTGAGCTTCCTGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AAGGGAGGGAGGGAGAAGGGCTGGAGTAGAGTGCGCCTGGGAACTGGCACGGAGTCTGCAGAACCGCTCTaGCAATTGCTTGCCACGAGG +
Preference number: 5 (lower is better)
Translates to: KGGREKGWSRVRLGTGTESAEPL*QLLATR
Trigger: CCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGA...CTCCGTGCCAGTTCCCAGGCGCACTCTACTCCAGCCCTTCTCCCTCCCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGGGGGGCCTTAGGGGTTaGCTCATCAAGGAGCTTACA +
Preference number: 5 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGGGLRG*LIKELT
Trigger: TGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp CCCGCCGCAGGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTGGCTTaGTTGCTGTCCTCTCTAGCTGTGCAGGAAGCTCAAGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PAAGLSLFWVGLQVA*LLSSLAVQEAQVSQ
Trigger: CTGGGAGACTTGAGCTTCCTGCACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp ATTTGGTGTCATCACTGCCCATCTTCCGCTCTCTGCGTGTCCAGCTaGTCAGGCCTCCTCGGGAATGGGAGAGAAACCCGGCTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: IWCHHCPSSALCVSS*SGLLGNGRETRLCP
Trigger: TGGGCAGAGCCGGGTTTCTCTCCCATTCCCGAGGAGGCCTGAGCAGCTGGACACGCAGAGAGCGGAAGATGGGCAGTGATGACACCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470615.1
CDS CCA 90 bp AAGGTGGCCGCCCAGCCCGAATGTTCCGTGCCCTGTGACGGTAACTaGCTCCAAATGCCACTTTTCCTCTGGGTGTGGCCCACTGTTCTC +
Preference number: 5 (lower is better)
Translates to: KVAAQPECSVPCDGN*LQMPLFLWVWPTVL
Trigger: GAGAACAGTGGGCCACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGGGCTGGGCGGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp TATCCGTTTAGCTGTCCTGGGGGTGATGGGGTTCGCTCTGCTGGCTaGCTGTCTGCTGAATCCAGGGCGTGCTTGCTGGGTATGATGGGG +
Preference number: 5 (lower is better)
Translates to: YPFSCPGGDGVRSAG*LSAESRACLLGMMG
Trigger: CCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGAGCGAACCCCATCACCCCCAGGACAGCTAAACGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp CTAGCTGTGCAGGAAGCTCAAGTCTCCCAGAGGTGCCTGCTGGGCTaGTGGCCACATCCAGCAATGAACCTCTTGGAGAGAGGGTCCGGA +
Preference number: 5 (lower is better)
Translates to: LAVQEAQVSQRCLLG*WPHPAMNLLERGSG
Trigger: TCCGGACCCTCTCTCCAAGAGGTTCATTGCTGGATGTGGCCACCAGCCCAGCAGGCACCTCTGGGAGACTTGAGCTTCCTGCACAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp ATCTTCCGCTCTCTGCGTGTCCAGCTGCTCAGGCCTCCTCGGGAATaGGAGAGAAACCCGGCTCTGCCCAGCAGCCAAGACTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: IFRSLRVQLLRPPRE*ERNPALPSSQDFFP
Trigger: AGGAAAGAAGTCTTGGCTGCTGGGCAGAGCCGGGTTTCTCTCCCATTCCCGAGGAGGCCTGAGCAGCTGGACACGCAGAGAGCGGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470615.1
CDS-3UTR CAA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCGGAAGAGGAGCGAATTaGGGAGGATTTTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTGRGAN*GGFFRA
Trigger: GGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTCC...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGCGCTTCCGCACGTCCTaGAGGTTGAACAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRRFRTS*RLNSRL
Trigger: TAGCCTGCTGTTCAACCTCAAGGACGTGCGGAAGCG...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGGCTCAGGATCCCTATaGCAAAGCCTCAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRGSGSL*QSLRER
Trigger: CCTCTCCCTGAGGCTTTGCAATAGGGATCCTGAGCC...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGGGGGCACAGCGGCCTTaGCTGTGTCTGCTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVGAQRP*LCLLQV
Trigger: GACTTGGAGCAGACACAGCAAAGGCCGCTGTGCCCC...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp AAGGTGGCCGTGTCATTGGCTGCTGGGAGGAAGCTGCTGGAGCCGTaGCAGGCCATTTCTGGATTCTTGGAGGACTCCTGTTCTCCGTGC +
Preference number: 5 (lower is better)
Translates to: KVAVSLAAGRKLLEP*QAISGFLEDSCSPC
Trigger: GCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp TGTCCTCGGAGATGCACAAACTCCGGAATGCCCGGTCTGTTAGGCTaGTCACCTCCCTGTCTGCATCATCCAACACGCTGCCGATGCTGG +
Preference number: 5 (lower is better)
Translates to: CPRRCTNSGMPGLLG*SPPCLHHPTRCRCW
Trigger: CCAGCATCGGCAGCGTGTTGGATGATGCAGACAGGGAGGTGAGCAGCCTAACAGACCGGGCATTCCGGAGTTTGTGCATCTCCGAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp ACTTGGGTAGCTGTTGGAAGGTGGCCGCCCAGCCCGAATGTTCCGTaGCCTGTGACGGTAACTGGCTCCAAATGCCACTTTTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TWVAVGRWPPSPNVP*PVTVTGSKCHFSSG
Trigger: CCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGGGCTGGGCGGCCACCTTCCAACAGCTACCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp CTCCTGAGCCTGATCCGTCTTCCTCCTCTTACTTGCCAGCTTCTTTaGCCGCCGCAGGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LLSLIRLPPLTCQLL*PPQGFLCFGWDCRW
Trigger: CCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGAGGAGGAAGACGGATCAGGCTCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GGTACTTTTCCTCTCCCTGAACGTACTTGGGTAGCTGTTGGAAGGTaGCCGCCCAGCCCGAATGTTCCGTGCCCTGTGACGGTAACTGGC +
Preference number: 5 (lower is better)
Translates to: GTFPLPERTWVAVGR*PPSPNVPCPVTVTG
Trigger: GCCAGTTACCGTCACAGGGCACGGAACATTCGGGCTGGGCGGCCACCTTCCAACAGCTACCCAAGTACGTTCAGGGAGAGGAAAAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp CTGGGAGGAAGCTGCTGGAGCCGTGACAGGCCATTTCTGGATTCTTaGAGGACTCCTGTTCTCCGTGCTTCCTGCCTGGCTGGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LGGSCWSRDRPFLDS*RTPVLRASCLAGSC
Trigger: ACAGCTACCAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp ATTGGCTGCTGGGAGGAAGCTGCTGGAGCCGTGACAGGCCATTTCTaGATTCTTGGAGGACTCCTGTTCTCCGTGCTTCCTGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: IGCWEEAAGAVTGHF*ILGGLLFSVLPAWL
Trigger: CAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp TATTGCAAAGCCTCAGGGAGAGGTGTTTCCTGGGGCGGTGTTCCCTaGAGTCTGGACACCAGCTGGATCCGGCAGGACCCATCTCCAACT +
Preference number: 5 (lower is better)
Translates to: YCKASGRGVSWGGVP*SLDTSWIRQDPSPT
Trigger: AGTTGGAGATGGGTCCTGCCGGATCCAGCTGGTGTCCAGACTCCAGGGAACACCGCCCCAGGAAACACCTCTCCCTGAGGCTTTGCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp ATGGGGGTGGCTGGTCTTCTATGTCACCCTCGGGTAAAGCAATGGTaGGGATGTGCCATGGGGCTGCCAGCTTCCCTGAGTCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: MGVAGLLCHPRVKQW*GCAMGLPASLSLQN
Trigger: GTTCTGCAGACTCAGGGAAGCTGGCAGCCCCATGGCACATCCCCACCATTGCTTTACCCGAGGGTGACATAGAAGACCAGCCACCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAGCCATTTCTGGATTCTaGGAGGACTCCTGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: CGYRGTLGTRRCPCHTHLAISGF*EDSCSP
Trigger: CGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGC...TAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATAGGCATGCGTGCCCATaGCTTAAGGCACAGTACTGC +
Preference number: 5 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNRHACP*LKAQYC
Trigger: GCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCT...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGCCGTAGCTCTGAGGGTGTaGTCTTTAATCGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: RGPGQASSAPPSEESQGAVALRV*SLIVNS
Trigger: GCTGTTTACGATTAAAGACAACACCCTCAGAGCTAC...GGCTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTAGGCCCAGGGGCTGGCTaGATTAGGCTCCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: ALGVCSSRSLQVSGWVWVGPGAG*IRLLGK
Trigger: CTTCCCGAGGAGCCTAATCAAGCCAGCCCCTGGGCC...TACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp CTGGAAGAGGAGCGAATTTGGGAGGATTTTTCAGAGCCGGAGGCTTaGTGGCAGTGGGCCTGCTCTCACAACGTTGGCTCTCGGTCCTGT +
Preference number: 5 (lower is better)
Translates to: LEEERIWEDFSEPEA*WQWACSHNVGSRSC
Trigger: ACAGGACCGAGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp CTCGCCATGCTTCTCCTGAGCCTGATCCGTCTTCCTCCTCTTACTTaGCAGCTTCTTTGCCCGCCGCAGGGCTTTCTCTGTTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LAMLLLSLIRLPPLT*QLLCPPQGFLCFGW
Trigger: CCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGAGGAGGAAGACGGATCAGGCTCAGGAGAAGCATGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GAAGAGGAGCGAATTTGGGAGGATTTTTCAGAGCCGGAGGCTTGCTaGCAGTGGGCCTGCTCTCACAACGTTGGCTCTCGGTCCTGTCGA +
Preference number: 5 (lower is better)
Translates to: EEERIWEDFSEPEAC*QWACSHNVGSRSCR
Trigger: TCGACAGGACCGAGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GGTGTGGAGAGGGGAACTTTGACTCACATAAGGTGGCCGTGTCATTaGCTGCTGGGAGGAAGCTGCTGGAGCCGTGACAGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: GVERGTLTHIRWPCH*LLGGSCWSRDRPFL
Trigger: CAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGTCAAAGTTCCCCTCTCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CTGGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGCCAAGAAAGCTGTCCTaGTCAGCCGGCAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LGALGVCSSRSLQVSGWVPRKLS*SAGRCL
Trigger: GAGACACCTGCCGGCTGACAAGGACAGCTTTCTTGG...CACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGTGGGTGTGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCGCACTTCTTATTTCCTaGCATCATCTGTTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGCGYRGTLGTRRCPCHTALLIS*HHLLAP
Trigger: TGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGC...GGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCACACCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGAGGGGACCGGGCCAAGCAAGCAGTGCCCCTCCATCAGAGGAGAGCCAGGGAGAACTGTTCCTGGGGGTaGTGTTTTGTATACAAAGGT +
Preference number: 5 (lower is better)
Translates to: GGDRAKQAVPLHQRRARENCSWG*CFVYKG
Trigger: ACCTTTGTATACAAAACACAACCCCCAGGAACAGTT...CTCCCTGGCTCTCCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATGAGCCAGGGAGCCCTTaGGGTGAGGTCGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDEPGSP*GEVVLG
Trigger: TCCCAAGACGACCTCACCCAAAGGGCTCCCTGGCTC...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp CTTCCTCCATGGGGGCTGGGCTGGCTTCTCTTGAGAATCAGGTTGTaGGCTGGGAGCTTTTCCTTCCACAGCAAATACCTGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPPWGLGWLLLRIRL*AGSFSFHSKYLGSW
Trigger: CCAGGAGCCCAGGTATTTGCTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATTCTCAAGAGAAGCCAGCCCAGCCCCCATGGAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp CCCAGCCCGAATGTTCCGTGCCCTGTGACGGTAACTGGCTCCAAATaGCACTTTTCCTCTGGGTGTGGCCCACTGTTCTCTGGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: PSPNVPCPVTVTGSK*HFSSGCGPLFSGEK
Trigger: CTTTTCACCAGAGAACAGTGGGCCACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp GATGGGGTTCGCTCTGCTGGCTGGCTGTCTGCTGAATCCAGGGCGTaGTTGCTGGGTATGATGGGGGTCAGGAGCTTACTGATGTTAAAG +
Preference number: 5 (lower is better)
Translates to: DGVRSAGWLSAESRA*LLGMMGVRSLLMLK
Trigger: CTTTAACATCAGTAAGCTCCTGACCCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGAGCGAACCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp CCGGCTCTGCCCAGCAGCCAAGACTTCTTTCCTCTTTATCCAGGCTaGCCAAAGGTGATAGGAGAGTGGATTCAGGACCCAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PALPSSQDFFPLYPG*PKVIGEWIQDPSLL
Trigger: GAGGAGGCTTGGGTCCTGAATCCACTCTCCTATCACCTTTGGGCAGCCTGGATAAAGAGGAAAGAAGTCTTGGCTGCTGGGCAGAGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470615.1
CDS CCA 90 bp TCCATGGGGGCTGGGCTGGCTTCTCTTGAGAATCAGGTTGTGAGCTaGGAGCTTTTCCTTCCACAGCAAATACCTGGGCTCCTGGATCCC +
Preference number: 5 (lower is better)
Translates to: SMGAGLASLENQVVS*ELFLPQQIPGLLDP
Trigger: GGGATCCAGGAGCCCAGGTATTTGCTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATTCTCAAGAGAAGCCAGCCCAGCCCCCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp TCTTACTTGCCAGCTTCTTTGCCCGCCGCAGGGCTTTCTCTGTTTTaGGTGGGACTGCAGGTGGCTTGCTTGCTGTCCTCTCTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SYLPASLPAAGLSLF*VGLQVACLLSSLAV
Trigger: CACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp CTCCAAATGCCACTTTTCCTCTGGGTGTGGCCCACTGTTCTCTGGTaGAAAGTCCCAAACACCTGTCGGGTGATATCCGGGGACACAGCC +
Preference number: 5 (lower is better)
Translates to: LQMPLFLWVWPTVLW*KVPNTCRVISGDTA
Trigger: GGCTGTGTCCCCGGATATCACCCGACAGGTGTTTGGGACTTTTCACCAGAGAACAGTGGGCCACACCCAGAGGAAAAGTGGCATTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp TTGACTCACATAAGGTGGCCGTGTCATTGGCTGCTGGGAGGAAGCTaGTGGAGCCGTGACAGGCCATTTCTGGATTCTTGGAGGACTCCT +
Preference number: 5 (lower is better)
Translates to: LTHIRWPCHWLLGGS*WSRDRPFLDSWRTP
Trigger: AGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp TCTCTTTGCAATGCTTCCCCCTGGCTGCGGTTTTCCAGGCATGCGTaGCCATTGCTTAAGGCACAGTACTGCAGCTCATCCTTCCGCATC +
Preference number: 5 (lower is better)
Translates to: SLCNASPWLRFSRHA*PLLKAQYCSSSFRI
Trigger: GATGCGGAAGGATGAGCTGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAACCGCAGCCAGGGGGAAGCATTGCAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GAGCGAATTTGGGAGGATTTTTCAGAGCCGGAGGCTTGCTGGCAGTaGGCCTGCTCTCACAACGTTGGCTCTCGGTCCTGTCGAAAGATT +
Preference number: 5 (lower is better)
Translates to: ERIWEDFSEPEACWQ*ACSHNVGSRSCRKI
Trigger: AATCTTTCGACAGGACCGAGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp ACTCACATAAGGTGGCCGTGTCATTGGCTGCTGGGAGGAAGCTGCTaGAGCCGTGACAGGCCATTTCTGGATTCTTGGAGGACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: THIRWPCHWLLGGSC*SRDRPFLDSWRTPV
Trigger: AACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp AGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGAACCAAATGGTGTTCTaGGTGGGGAAGAGGCAAACA +
Preference number: 5 (lower is better)
Translates to: RGTLGTRRCPCHTHLICRNQMVF*VGKRQT
Trigger: TGTTTGCCTCTTCCCCACCAAGAACACCATTTGGTT...CCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGGGGCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGTTGGAGACAGGCTTATaGCTGCTCCTTAGGCCGGAA +
Preference number: 5 (lower is better)
Translates to: GGLRGLLIKELTSEWVGVLETGL*LLLRPE
Trigger: TTCCGGCCTAAGGAGCAGCAATAAGCCTGTCTCCAA...CACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CAGGCGGTGCCCTTGCCACACCCACCTAATTTGCAGGGCGAGGGAAGAGCAGGGTGGCATAAAATCGGATaGGCTGTCACTGTAAAACAC +
Preference number: 5 (lower is better)
Translates to: QAVPLPHPPNLQGEGRAGWHKIG*AVTVKH
Trigger: GTGTTTTACAGTGACAGCCAATCCGATTTTATGCCA...CCCTGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTGAGTTGACCTACTTGCCAGCTTCTTaGCCCGCCGCAGGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HFCKIALGWSLASLPELTYLPAS*PAAGLS
Trigger: AGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTA...GGTCAACTCAGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp CCCTGTCTGCATCATCCAACACGCTGCCGATGCTGGAGGAGTCGCTaGACGCGTCTGTGCACTTCTTATTTCCTTGCATCATCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: PCLHHPTRCRCWRSR*TRLCTSYFLASSVG
Trigger: GCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCATCGGCAGCGTGTTGGATGATGCAGACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp AGGCCATTTCTGGATTCTTGGAGGACTCCTGTTCTCCGTGCTTCCTaGCTGGCTGGTAGCTGTTCTGATGGGTGTTGGAAACTTCAGCGG +
Preference number: 5 (lower is better)
Translates to: RPFLDSWRTPVLRAS*LAGSCSDGCWKLQR
Trigger: CCGCTGAAGTTTCCAACACCCATCAGAACAGCTACCAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp CATTTCTGGATTCTTGGAGGACTCCTGTTCTCCGTGCTTCCTGCCTaGCTGGTAGCTGTTCTGATGGGTGTTGGAAACTTCAGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: HFWILGGLLFSVLPA*LVAVLMGVGNFSGH
Trigger: GTGCCCGCTGAAGTTTCCAACACCCATCAGAACAGCTACCAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp CAGGAGGACAGGGTTCTCTTAGCAAGGTCGTGTCCCCATAGTGCTTaGGAGCTTTGCTTTCTGGGACGGTTCCAGCTGTGTCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QEDRVLLARSCPHSA*ELCFLGRFQLCPFS
Trigger: AGAGAAAGGACACAGCTGGAACCGTCCCAGAAAGCAAAGCTCCCAAGCACTATGGGGACACGACCTTGCTAAGAGAACCCTGTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GAATCAGGTTGTGAGCTGGGAGCTTTTCCTTCCACAGCAAATACCTaGGCTCCTGGATCCCTGCACCCCCAGGGTATAGATGTGGACAGA +
Preference number: 5 (lower is better)
Translates to: ESGCELGAFPSTANT*APGSLHPQGIDVDR
Trigger: TCTGTCCACATCTATACCCTGGGGGTGCAGGGATCCAGGAGCCCAGGTATTTGCTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp CTTGCCCGTCTCTGGGTCATAGAAGGTCTTGATTTTCACCTGGAGTaGCAAGTCGAAGACAAAGTACTCCCCGGACTGCGGATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LARLWVIEGLDFHLE*QVEDKVLPGLRILE
Trigger: CTCCAGGATCCGCAGTCCGGGGAGTACTTTGTCTTCGACTTGCCACTCCAGGTGAAAATCAAGACCTTCTATGACCCAGAGACGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp CCCCTCGGAGGACGGGATGGAGACCTTGACATACTTGCCCGTCTCTaGGTCATAGAAGGTCTTGATTTTCACCTGGAGTGGCAAGTCGAA +
Preference number: 5 (lower is better)
Translates to: PLGGRDGDLDILARL*VIEGLDFHLEWQVE
Trigger: TTCGACTTGCCACTCCAGGTGAAAATCAAGACCTTCTATGACCCAGAGACGGGCAAGTATGTCAAGGTCTCCATCCCGTCCTCCGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTTAGCCAGTCTGCCTCGCTCTTGCAATTGCTaGCCACGAGGCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: ANDHFCKIALGWSLASLPRSCNC*PRGQVQ
Trigger: CTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCG...AGGCAGACTGGCTAAGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp TGTGGCCCACTGTTCTCTGGTGAAAAGTCCCAAACACCTGTCGGGTaGTATCCGGGGACACAGCCAGATAGGAGTCATGGAAGGATGTGT +
Preference number: 5 (lower is better)
Translates to: CGPLFSGEKSQTPVG*YPGTQPDRSHGRMC
Trigger: ACACATCCTTCCATGACTCCTATCTGGCTGTGTCCCCGGATATCACCCGACAGGTGTTTGGGACTTTTCACCAGAGAACAGTGGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp TTGCCAGTCTTTGGCTTCCTCCATGGGGGCTGGGCTGGCTTCTCTTaGGAATCAGGTTGTGAGCTGGGAGCTTTTCCTTCCACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LPVFGFLHGGWAGFS*ESGCELGAFPSTAN
Trigger: ATTTGCTGTGGAAGGAAAAGCTCCCAGCTCACAACCTGATTCTCAAGAGAAGCCAGCCCAGCCCCCATGGAGGAAGCCAAAGACTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp TACTGCAGCTCATCCTTCCGCATCACATTCTCCTTCTCATCCTTCTaGCTGTCACCTGCACTCACATCCTTCCTCCTGTCTTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: YCSSSFRITFSFSSF*LSPALTSFLLSSRW
Trigger: CCAGCGGGAAGACAGGAGGAAGGATGTGAGTGCAGGTGACAGTCAGAAGGATGAGAAGGAGAATGTGATGCGGAAGGATGAGCTGCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp TCTGTCTCTTGGGACACAGATCTGGAGAGCCCATTCTCTAGCTGGTaGGTCTTCATTTTCTCTGTAGCCCCTCCAGGCTCAGGATCCCTA +
Preference number: 5 (lower is better)
Translates to: SVSWDTDLESPFSSW*VFIFSVAPPGSGSL
Trigger: TAGGGATCCTGAGCCTGGAGGGGCTACAGAGAAAATGAAGACCCACCAGCTAGAGAATGGGCTCTCCAGATCTGTGTCCCAAGAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATTTCTCTCCAGCAGCTTaGGTTGGTGGGCATTCCATG +
Preference number: 5 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDFSPAA*VGGHSM
Trigger: CATGGAATGCCCACCAACCAAAGCTGCTGGAGAGAA...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GCCTTAGGGGTTTGCTCATCAAGGAGCTTACAAGTGAGTGGGTGGGTGTGGGTAGGGAGGATGACACCGTaGCTCACAGGTTCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: ALGVCSSRSLQVSGWVWVGRMTP*LTGSCF
Trigger: AAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCC...TACCCACACCCACCCACTCACTTGTAAGCTCCTTGATGAGCAAACCCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp ATGCTGGAGGAGTCGCTGAACGCGTCTGTGCACTTCTTATTTCCTTaGATCATCTGTTGGCTCCAAGAAAGCTGTCCTTGTCAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: MLEESLNASVHFLFP*IICWLQESCPCQPA
Trigger: TGCCGGCTGACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp TCGCTGAACGCGTCTGTGCACTTCTTATTTCCTTGCATCATCTGTTaGCTCCAAGAAAGCTGTCCTTGTCAGCCGGCAGGTGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SLNASVHFLFPCIIC*LQESCPCQPAGVSG
Trigger: ACCAGAGACACCTGCCGGCTGACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGGGTACAGAGGGACACTTGGGACCAGGCGGTGCCCTTGCCACACCCACCTAATATTAGTGTTGATACTTaGGAGACAGGCTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: WVQRDTWDQAVPLPHPPNISVDT*ETGLLL
Trigger: CAGCAATAAGCCTGTCTCCAAAGTATCAACACTAAT...ATTAGGTGGGTGTGGCAAGGGCACCGCCTGGTCCCAAGTGTCCCTCTGTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGCTCAGGTTCTGTCTCTaGGGACACAGATCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGLRFCL*GHRSGE
Trigger: CTCTCCAGATCTGTGTCCCAAGAGACAGAACCTGAG...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 90 bp GGAGAGAGGGGCCCTGGGAAGAATTTCTGGTTCAAATGTGTGTTCTaGAGTCCTGCTTCCCTCTCAGGTTCTGTCTCTTGGGACACAGAT +
Preference number: 5 (lower is better)
Translates to: GERGPGKNFWFKCVF*SPASLSGSVSWDTD
Trigger: ATCTGTGTCCCAAGAGACAGAACCTGAGAGGGAAGCAGGACTTCAGAACACACATTTGAACCAGAAATTCTTCCCAGGGCCCCTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp GGGCCCTGGGAAGAATTTCTGGTTCAAATGTGTGTTCTGAAGTCCTaGTTCCCTCTCAGGTTCTGTCTCTTGGGACACAGATCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GPWEEFLVQMCVLKS*FPLRFCLLGHRSGE
Trigger: CTCTCCAGATCTGTGTCCCAAGAGACAGAACCTGAGAGGGAAGCAGGACTTCAGAACACACATTTGAACCAGAAATTCTTCCCAGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTCCTGCTCTCACAACGTaGGCTCTCGGTCCTGTCGAA +
Preference number: 5 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPPALTT*ALGPVE
Trigger: TTCGACAGGACCGAGAGCCAACGTTGTGAGAGCAGG...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGGAGGGAGTAAGGTCTTaGGCCTGTGAAAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGEGVRS*ACEKVV
Trigger: CACAACCTTTTCACAGGCCAAAGACCTTACTCCCTC...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGCTGGTCCTGGCAATTCCTCCTCTTaGTGGCCACTGCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ETHSVQMIISAKLPWAGPGNSSS*WPLLRE
Trigger: CTCCCTCAGCAGTGGCCACAAAGAGGAGGAATTGCC...AGGACCAGCCCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGGGGTCCTTCTGGGGATaGATGTGTGATGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: PVKETHSVQMIISAKLPWGSFWG*MCDAVG
Trigger: CCCCACTGCATCACACATCAATCCCCAGAAGGACCC...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAACGGACCACGGGGAAATaGTGTCGGGGCCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKRTTGK*CRGLSL
Trigger: CAGAGAGAGGCCCCGACACAATTTCCCCGTGGTCCG...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCCCTGGCCACACCCACCTAATTaGCAGGGCGAGGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PVKETHSVQMIISAKLPWPHPPN*QGEGRA
Trigger: TGCTCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGG...CCAGGGCAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 90 bp GCTGTCACTGTAAAACACATCTTCCTCCTCAGGAGAGAGGGGCCCTaGGAAGAATTTCTGGTTCAAATGTGTGTTCTGAAGTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: AVTVKHIFLLRREGP*EEFLVQMCVLKSCF
Trigger: GAAGCAGGACTTCAGAACACACATTTGAACCAGAAATTCTTCCCAGGGCCCCTCTCTCCTGAGGAGGAAGATGTGTTTTACAGTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GTATGTGTTGATGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGCCTCTCTGGTaGGTCTGTGTCTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VCVDDRVCVCVCVCVCVCGGPLW*VCVFSS
Trigger: AGAAGAAAAGACACAGACCAACCAGAGAGGCCCACC...ACACACACACACACACACACACACACACACACACACACGATCATCAACACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GCCCTTTGGGTGAGGTCGTCTTGGGATCCCTACTGCCTTCTGGACTTTATGGATAATTTGGCCTTACCTTaGAGGCTTGGCATAAAATCG +
Preference number: 5 (lower is better)
Translates to: ALWVRSSWDPYCLLDFMDNLALP*RLGIKS
Trigger: CGATTTTATGCCAAGCCTCAAAGGTAAGGCCAAATT...ATCCATAAAGTCCAGAAGGCAGTAGGGATCCCAAGACGACCTCACCCAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 90 bp TCCTCAAGCCCATTGGGGAGGATGACACCGTTGCTCACAGGTTCTTaGTTTCCATCAACCTTACCTCTAGTTTTCTCATCAAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SSSPLGRMTPLLTGS*FPSTLPLVFSSSTF
Trigger: GAAAGTGCTTGATGAGAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCACCTGGGGGTTGTGTTTaGTATACAAAGGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GKFLPVKETHSVQMIISAPGGCV*YTKVGL
Trigger: GAGGCCCACCTTTGTATACAAAACACAACCCCCAGG...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAAGGGCTTTCTCTGTTTaGGGTGGGACTGCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKRAFSV*GGTAGG
Trigger: GCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCT...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAACAGCATGTGCCTGTTaGAAGCAGAAGATGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GKFLPVKETHSVQMIISATACAC*KQKMVR
Trigger: CCTCACCATCTTCTGCTTCAAACAGGCACATGCTGT...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGGAACCGCTCTTGCAATaGCTTGCCACGAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: FLPVKETHSVQMIISAKLEPLLQ*LATRPG
Trigger: ACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTC...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTGTTTTGGGGGAGGGTTTTTATGCTTATATTaGGTGTCATCACTGCCCATC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVCVACFGGGFLCLY*VSSLPI
Trigger: GATGGGCAGTGATGACACCAAATATAAGCATAAAAA...CCCTCCCCCAAAACAAGCAACACACACACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp GGCAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAGTTGCTCACAGGTTCTaGCTTTCCATCAACCTTACC +
Preference number: 5 (lower is better)
Translates to: GKFLPVKETHSVQMIISAVAHRF*LSINLT
Trigger: GGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAAC...TGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGCTTTCCTCAAGCCCATaGGGGAGGATGACACCGTTG +
Preference number: 5 (lower is better)
Translates to: FLPVKETHSVQMIISAKLLSSSP*GRMTPL
Trigger: CAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAG...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp TTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAAATTGGACGGGATGGAGACCTaGACATACTTGCCCGTCTCT +
Preference number: 5 (lower is better)
Translates to: FLPVKETHSVQMIISAKLDGMET*TYLPVS
Trigger: AGAGACGGGCAAGTATGTCAAGGTCTCCATCCCGTC...CAATTTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CAAGTTTCTCCCTGTGAAGGAAACCCATTCTGTGCAAATGATCATTTCTGCAAATCCTTGCATCATCTGTaGGCTCCAAGAAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QVSPCEGNPFCANDHFCKSLHHL*APRKLS
Trigger: GGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGA...TTTGCAGAAATGATCATTTGCACAGAATGGGTTTCCTTCACAGGGAGAAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS-3UTR CAA 90 bp CTGCCTTCTGGACTTTATGGATCTAAAAAGGCTAAGTATGTGTTGATGATCGTGAAGGCTAAGTATGTGTaGATGATCGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LPSGLYGSKKAKYVLMIVKAKYV*MIVCVC
Trigger: ACACACACACACGATCATCAACACATACTTAGCCTT...CACGATCATCAACACATACTTAGCCTTTTTAGATCCATAAAGTCCAGAAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CCCACACGAGGGCGTGGGTCAGGTCCTCCCTCCGGGTaGCCCTGGCAGGACTGGAGCTGGCCCAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PTRGRGSGPPSG*PWQDWSWPRGW
Trigger: CCAGCCCCTGGGCCAGCTCCAGTCCTGCCAGGGTCACCCGGAGGGAGGACCTGACCCACGCCCTCGTGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp ATAGGGAGCGGCCAGGGCGTCCGGTGGGGGCGGCTCTaGGGAGGCCCCCTCGGAGGACGGGATGGAGACCTT +
Preference number: 6 (lower is better)
Translates to: IGSGQGVRWGRL*GGPLGGRDGDL
Trigger: AAGGTCTCCATCCCGTCCTCCGAGGGGGCCTCCCCAGAGCCGCCCCCACCGGACGCCCTGGCCGCTCCCTAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CCTGGGTCCAGCTGTAGTCCAGACTCGTGGACACTCTaGGTCCTGGCGCGGGCCGCGGAGGCACGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: PGSSCSPDSWTL*VLARAAEARGP
Trigger: GGGCCCTCGTGCCTCCGCGGCCCGCGCCAGGACCCAGAGTGTCCACGAGTCTGGACTACAGCTGGACCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CCGACAGGCTCCGAGAAGCCGGACACGGAGTGGCGGTaGACGGGAGGGGGCAGGGAACGGACCACGGGGAAA +
Preference number: 6 (lower is better)
Translates to: PTGSEKPDTEWR*TGGGRERTTGK
Trigger: TTTCCCCGTGGTCCGTTCCCTGCCCCCTCCCGTGCACCGCCACTCCGTGTCCGGCTTCTCGGAGCCTGTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AGTAGGGGGTCAGAGCCGCCCTCCCACACGAGGGCGTaGGTCAGGTCCTCCCTCCGGGTGACCCTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SRGSEPPSHTRA*VRSSLRVTLAG
Trigger: TCCTGCCAGGGTCACCCGGAGGGAGGACCTGACCCACGCCCTCGTGTGGGAGGGCGGCTCTGACCCCCTACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GAGGACCATGAGGGCGCTGGCCTGCAGAGTGCGGGGTaGAGTCACCGTGAGGCCCTGGGTCCAGCTGTAGTC +
Preference number: 6 (lower is better)
Translates to: EDHEGAGLQSAG*SHREALGPAVV
Trigger: GACTACAGCTGGACCCAGGGCCTCACGGTGACTGCACCCCGCACTCTGCAGGCCAGCGCCCTCATGGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GACCCTGGCAGGACTGGAGCTGGCCCAGGGGCTGGCTaGATTAGGCTCCTCGGGAAGCAGCTCTGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: DPGRTGAGPGAG*IRLLGKQLWSS
Trigger: GGAGGACCAGAGCTGCTTCCCGAGGAGCCTAATCAAGCCAGCCCCTGGGCCAGCTCCAGTCCTGCCAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp ACCCTGGCAGGACTGGAGCTGGCCCAGGGGCTGGCTTaGTTAGGCTCCTCGGGAAGCAGCTCTGGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: TLAGLELAQGLA*LGSSGSSSGPP
Trigger: TGGAGGACCAGAGCTGCTTCCCGAGGAGCCTAATCAAGCCAGCCCCTGGGCCAGCTCCAGTCCTGCCAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GGCCTCTCTCTGGGGCACAGCGGCCTTTGCTGTGTCTaGTCCAAGTCCTCCGGGCAGGGCTTTCCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: GLSLGHSGLCCV*SKSSGQGFPSC
Trigger: ACAGGAGGGAAAGCCCTGCCCGGAGGACTTGGAGCAGACACAGCAAAGGCCGCTGTGCCCCAGAGAGAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GCCTCAGGGAGAGGTGTTTCCTGGGGCGGTGTTCCCTaGAGTCTGGACACCAGCTGGATCCGGCAGGACCCA +
Preference number: 6 (lower is better)
Translates to: ASGRGVSWGGVP*SLDTSWIRQDP
Trigger: TGGGTCCTGCCGGATCCAGCTGGTGTCCAGACTCCAGGGAACACCGCCCCAGGAAACACCTCTCCCTGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GCAATTGCTTGCCACGAGGCCAGGTGCAGCATCTGGTaGTGCCTTCACCCGGTCCCCCTCTCCCACCAGAGG +
Preference number: 6 (lower is better)
Translates to: AIACHEARCSIW*CLHPVPLSHQR
Trigger: CCTCTGGTGGGAGAGGGGGACCGGGTGAAGGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp ATTGCTTGCCACGAGGCCAGGTGCAGCATCTGGTGGTaGCTTCACCCGGTCCCCCTCTCCCACCAGAGGCAT +
Preference number: 6 (lower is better)
Translates to: IACHEARCSIWW*LHPVPLSHQRH
Trigger: ATGCCTCTGGTGGGAGAGGGGGACCGGGTGAAGGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AAGTCGAAGACAAAGTACTCCCCGGACTGCGGATCCTaGAGGACCTTCTGGGTGGCGGGGTACGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: KSKTKYSPDCGS*RTFWVAGYAGR
Trigger: CCTGCCCGCGTACCCCGCCACCCAGAAGGTCCTCCAGGATCCGCAGTCCGGGGAGTACTTTGTCTTCGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp TCTCTGCGTGTCCAGCTGCTCAGGCCTCCTCGGGAATaGGAGAGAAACCCGGCTCTGCCCAGCAGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: SLRVQLLRPPRE*ERNPALPSSQD
Trigger: GTCTTGGCTGCTGGGCAGAGCCGGGTTTCTCTCCCATTCCCGAGGAGGCCTGAGCAGCTGGACACGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470615.1
CDS CAA 90 bp ATCCTGGCCATGCTCGACCCCTGCCCAGGGTCCTCCATGACCTCGTaGGCCATGCACTTCACACGTGTGCCCCGTGTGTTAGTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: ILAMLDPCPGSSMTS*AMHFTRVPRVLVGV
Trigger: GACACCCACTAACACACGGGGCACACGTGTGAAGTGCATGGCCAACGAGGTCATGGAGGACCCTGGGCAGGGGTCGAGCATGGCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp AGAACCGCTCTTGCAATTGCTTGCCACGAGGCCAGGTaGAGCATCTGGTGGTGCCTTCACCCGGTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: RTALAIACHEAR*SIWWCLHPVPL
Trigger: GAGGGGGACCGGGTGAAGGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CATCACTGCCCATCTTCCGCTCTCTGCGTGTCCAGCTaGTCAGGCCTCCTCGGGAATGGGAGAGAAACCCGG +
Preference number: 6 (lower is better)
Translates to: HHCPSSALCVSS*SGLLGNGRETR
Trigger: CCGGGTTTCTCTCCCATTCCCGAGGAGGCCTGAGCAGCTGGACACGCAGAGAGCGGAAGATGGGCAGTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470615.1
CDS CCA 72 bp CCTCTCCCTGAACGTACTTGGGTAGCTGTTGGAAGGTaGCCGCCCAGCCCGAATGTTCCGTGCCCTGTGACG +
Preference number: 6 (lower is better)
Translates to: PLPERTWVAVGR*PPSPNVPCPVT
Trigger: CGTCACAGGGCACGGAACATTCGGGCTGGGCGGCCACCTTCCAACAGCTACCCAAGTACGTTCAGGGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp TCCTGGGGCGGTGTTCCCTGGAGTCTGGACACCAGCTaGATCCGGCAGGACCCATCTCCAACTCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SWGGVPWSLDTS*IRQDPSPTLLP
Trigger: TGGAAGGAGAGTTGGAGATGGGTCCTGCCGGATCCAGCTGGTGTCCAGACTCCAGGGAACACCGCCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GGAGAGGTGTTTCCTGGGGCGGTGTTCCCTGGAGTCTaGACACCAGCTGGATCCGGCAGGACCCATCTCCAA +
Preference number: 6 (lower is better)
Translates to: GEVFPGAVFPGV*TPAGSGRTHLQ
Trigger: TTGGAGATGGGTCCTGCCGGATCCAGCTGGTGTCCAGACTCCAGGGAACACCGCCCCAGGAAACACCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp CATGGGGCTGCCAGCTTCCCTGAGTCTGCAGAACCGCTCTTGCAATaGCTTGCCACGAGGCCAGGTGCAGCATCTGGTGGTGCCTTCACC +
Preference number: 6 (lower is better)
Translates to: HGAASFPESAEPLLQ*LATRPGAASGGAFT
Trigger: GGTGAAGGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp ATGTGCCATGGGGCTGCCAGCTTCCCTGAGTCTGCAGAACCGCTCTaGCAATTGCTTGCCACGAGGCCAGGTGCAGCATCTGGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: MCHGAASFPESAEPL*QLLATRPGAASGGA
Trigger: GGCACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCCATGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CTGGGGAGGCCCCCTCGGAGGACGGGATGGAGACCTTaGCATACTTGCCCGTCTCTGGGTCATAGAAGGTCT +
Preference number: 6 (lower is better)
Translates to: LGRPPRRTGWRP*HTCPSLGHRRS
Trigger: AGACCTTCTATGACCCAGAGACGGGCAAGTATGTCAAGGTCTCCATCCCGTCCTCCGAGGGGGCCTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CGCTCTGCTGGCTGGCTGTCTGCTGAATCCAGGGCGTaGTTGCTGGGTATGATGGGGGTCAGGAGCTTACTG +
Preference number: 6 (lower is better)
Translates to: RSAGWLSAESRA*LLGMMGVRSLL
Trigger: CAGTAAGCTCCTGACCCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GGGCTGCCAGCTTCCCTGAGTCTGCAGAACCGCTCTTaGAATTGCTTGCCACGAGGCCAGGTGCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: GLPASLSLQNRS*NCLPRGQVQHL
Trigger: CAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GCCCAGCCCGAATGTTCCGTGCCCTGTGACGGTAACTaGCTCCAAATGCCACTTTTCCTCTGGGTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: AQPECSVPCDGN*LQMPLFLWVWP
Trigger: GGGCCACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGGGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CACCAGAGGCATAGATGGGAAATTCCCCTTTGGGGCTaGCTGAGAGGCCTCCATCCTGGCCATGCTCGACCC +
Preference number: 6 (lower is better)
Translates to: HQRHRWEIPLWG*LRGLHPGHARP
Trigger: GGGTCGAGCATGGCCAGGATGGAGGCCTCTCAGCCAGCCCCAAAGGGGAATTTCCCATCTATGCCTCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AACGGACCACGGGGAAATTGTGTCGGGGCCTCTCTCTaGGGCACAGCGGCCTTTGCTGTGTCTGCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: NGPRGNCVGASL*GTAAFAVSAPS
Trigger: ACTTGGAGCAGACACAGCAAAGGCCGCTGTGCCCCAGAGAGAGGCCCCGACACAATTTCCCCGTGGTCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp ATGCTCGACCCCTGCCCAGGGTCCTCCATGACCTCGTaGGCCATGCACTTCACACGTGTGCCCCGTGTGTTA +
Preference number: 6 (lower is better)
Translates to: MLDPCPGSSMTS*AMHFTRVPRVL
Trigger: TAACACACGGGGCACACGTGTGAAGTGCATGGCCAACGAGGTCATGGAGGACCCTGGGCAGGGGTCGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GGGGCTGCCAGCTTCCCTGAGTCTGCAGAACCGCTCTaGCAATTGCTTGCCACGAGGCCAGGTGCAGCATCT +
Preference number: 6 (lower is better)
Translates to: GAASFPESAEPL*QLLATRPGAAS
Trigger: AGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GCCAGCTTCTTTGCCCGCCGCAGGGCTTTCTCTGTTTaGGGTGGGACTGCAGGTGGCTTGCTTGCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: ASFFARRRAFSV*GGTAGGLLAVL
Trigger: GAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp GCCCGCCGCAGGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTGGCTaGCTTGCTGTCCTCTCTAGCTGTGCAGGAAGCTCAAGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: ARRRAFSVLGGTAGG*LAVLSSCAGSSSLP
Trigger: TGGGAGACTTGAGCTTCCTGCACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GCTGTTGGAAGGTGGCCGCCCAGCCCGAATGTTCCGTaGCCTGTGACGGTAACTGGCTCCAAATGCCACTTT +
Preference number: 6 (lower is better)
Translates to: AVGRWPPSPNVP*PVTVTGSKCHF
Trigger: AAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATTCGGGCTGGGCGGCCACCTTCCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CCCCCTGGCTGCGGTTTTCCAGGCATGCGTGCCCATTaGTTAAGGCACAGTACTGCAGCTCATCCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: PPGCGFPGMRAH*LRHSTAAHPSA
Trigger: TGCGGAAGGATGAGCTGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAACCGCAGCCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CCAGCTTCCCTGAGTCTGCAGAACCGCTCTTGCAATTaGTTGCCACGAGGCCAGGTGCAGCATCTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: PASLSLQNRSCN*LPRGQVQHLVV
Trigger: CACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AGGTGGCCGTGTCATTGGCTGCTGGGAGGAAGCTGCTaGAGCCGTGACAGGCCATTTCTGGATTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: RWPCHWLLGGSC*SRDRPFLDSWR
Trigger: CCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CTCTCCCACCAGAGGCATAGATGGGAAATTCCCCTTTaGGGCTGGCTGAGAGGCCTCCATCCTGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: LSHQRHRWEIPL*GWLRGLHPGHA
Trigger: AGCATGGCCAGGATGGAGGCCTCTCAGCCAGCCCCAAAGGGGAATTTCCCATCTATGCCTCTGGTGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CCAGCTTCTTTGCCCGCCGCAGGGCTTTCTCTGTTTTaGGTGGGACTGCAGGTGGCTTGCTTGCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: PASLPAAGLSLF*VGLQVACLLSS
Trigger: AGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp TCCCCCTGGCTGCGGTTTTCCAGGCATGCGTGCCCATaGCTTAAGGCACAGTACTGCAGCTCATCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: SPWLRFSRHACP*LKAQYCSSSFR
Trigger: GCGGAAGGATGAGCTGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAACCGCAGCCAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GCCAGCTTCCCTGAGTCTGCAGAACCGCTCTTGCAATaGCTTGCCACGAGGCCAGGTGCAGCATCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: ASFPESAEPLLQ*LATRPGAASGG
Trigger: ACCACCAGATGCTGCACCTGGCCTCGTGGCAAGCAATTGCAAGAGCGGTTCTGCAGACTCAGGGAAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp GGGGTTCGCTCTGCTGGCTGGCTGTCTGCTGAATCCAGGGCGTGCTaGCTGGGTATGATGGGGGTCAGGAGCTTACTGATGTTAAAGGGG +
Preference number: 6 (lower is better)
Translates to: GVRSAGWLSAESRAC*LGMMGVRSLLMLKG
Trigger: CCCCTTTAACATCAGTAAGCTCCTGACCCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGAGCGAACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp GCCGCAGGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTGGCTTGCTaGCTGTCCTCTCTAGCTGTGCAGGAAGCTCAAGTCTCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: AAGLSLFWVGLQVAC*LSSLAVQEAQVSQR
Trigger: CCTCTGGGAGACTTGAGCTTCCTGCACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp AACCCAGGATCCTCACCCCATTCTGGCCTTGGCAATTCCTCCTCTTaGTGGCCACTGCTGAGGGAGTCCTCCAAGGACATGGTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: NPGSSPHSGLGNSSS*WPLLRESSKDMVLR
Trigger: CCTGAGGACCATGTCCTTGGAGGACTCCCTCAGCAGTGGCCACAAAGAGGAGGAATTGCCAAGGCCAGAATGGGGTGAGGATCCTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp TCTCCTGAGCCTGATCCGTCTTCCTCCTCTTACTTGCCAGCTTCTTaGCCCGCCGCAGGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: SPEPDPSSSSYLPAS*PAAGLSLFWVGLQV
Trigger: CACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGAGGAGGAAGACGGATCAGGCTCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GATTTTTCAGAGCCGGAGGCTTGCTGGCAGTGGGCCTaGTCTCACAACGTTGGCTCTCGGTCCTGTCGAAAG +
Preference number: 6 (lower is better)
Translates to: DFSEPEACWQWA*SHNVGSRSCRK
Trigger: CTTTCGACAGGACCGAGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CGAATTTGGGAGGATTTTTCAGAGCCGGAGGCTTGCTaGCAGTGGGCCTGCTCTCACAACGTTGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: RIWEDFSEPEAC*QWACSHNVGSR
Trigger: CCGAGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AGCTGCTGGAGCCGTGACAGGCCATTTCTGGATTCTTaGAGGACTCCTGTTCTCCGTGCTTCCTGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SCWSRDRPFLDS*RTPVLRASCLA
Trigger: AGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AGGGGAACTTTGACTCACATAAGGTGGCCGTGTCATTaGCTGCTGGGAGGAAGCTGCTGGAGCCGTGACAGG +
Preference number: 6 (lower is better)
Translates to: RGTLTHIRWPCH*LLGGSCWSRDR
Trigger: CCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGTCAAAGTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp TCTGCTGGCTGGCTGTCTGCTGAATCCAGGGCGTGCTaGCTGGGTATGATGGGGGTCAGGAGCTTACTGATG +
Preference number: 6 (lower is better)
Translates to: SAGWLSAESRAC*LGMMGVRSLLM
Trigger: CATCAGTAAGCTCCTGACCCCCATCATACCCAGCAAGCACGCCCTGGATTCAGCAGACAGCCAGCCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp CTCTTACTTGCCAGCTTCTTTGCCCGCCGCAGGGCTTTCTCTGTTTaGGGTGGGACTGCAGGTGGCTTGCTTGCTGTCCTCTCTAGCTGT +
Preference number: 6 (lower is better)
Translates to: LLLASFFARRRAFSV*GGTAGGLLAVLSSC
Trigger: ACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp ACTCGCCATGCTTCTCCTGAGCCTGATCCGTCTTCCTCCTCTTACTaGCCAGCTTCTTTGCCCGCCGCAGGGCTTTCTCTGTTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: TRHASPEPDPSSSSY*PASLPAAGLSLFWV
Trigger: CACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGAGGAGGAAGACGGATCAGGCTCAGGAGAAGCATGGCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GAGCGAATTTGGGAGGATTTTTCAGAGCCGGAGGCTTaGTGGCAGTGGGCCTGCTCTCACAACGTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: ERIWEDFSEPEA*WQWACSHNVGS
Trigger: AGAGCCAACGTTGTGAGAGCAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp ATAAGGTGGCCGTGTCATTGGCTGCTGGGAGGAAGCTaGTGGAGCCGTGACAGGCCATTTCTGGATTCTTGG +
Preference number: 6 (lower is better)
Translates to: IRWPCHWLLGGS*WSRDRPFLDSW
Trigger: CCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp AATGCTTCCCCCTGGCTGCGGTTTTCCAGGCATGCGTaGCCATTGCTTAAGGCACAGTACTGCAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: NASPWLRFSRHA*PLLKAQYCSSS
Trigger: GGATGAGCTGCAGTACTGTGCCTTAAGCAATGGGCACGCATGCCTGGAAAACCGCAGCCAGGGGGAAGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp TCAGGCCTCCTCGGGAATGGGAGAGAAACCCGGCTCTaGCCAGCAGCCAAGACTTCTTTCCTCTTTATCCAG +
Preference number: 6 (lower is better)
Translates to: SGLLGNGRETRL*PAAKTSFLFIQ
Trigger: CTGGATAAAGAGGAAAGAAGTCTTGGCTGCTGGGCAGAGCCGGGTTTCTCTCCCATTCCCGAGGAGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470615.1
CDS CCA 72 bp TGGGAGGAAGCTGCTGGAGCCGTGACAGGCCATTTCTaGATTCTTGGAGGACTCCTGTTCTCCGTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: WEEAAGAVTGHF*ILGGLLFSVLP
Trigger: AGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAGAAATGGCCTGTCACGGCTCCAGCAGCTTCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp TGTGGTGTGGAGAGGGGAACTTTGACTCACATAAGGTaGCCGTGTCATTGGCTGCTGGGAGGAAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CGVERGTLTHIR*PCHWLLGGSCW
Trigger: CCAGCAGCTTCCTCCCAGCAGCCAATGACACGGCCACCTTATGTGAGTCAAAGTTCCCCTCTCCACACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GGCACAAAACCCAGGATCCTCACCCCATTCTGGCCTTaGCAATTCCTCCTCTTTGTGGCCACTGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: GTKPRILTPFWP*QFLLFVATAEG
Trigger: TCCCTCAGCAGTGGCCACAAAGAGGAGGAATTGCCAAGGCCAGAATGGGGTGAGGATCCTGGGTTTTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp TCCTCACCCCATTCTGGCCTTGGCAATTCCTCCTCTTaGTGGCCACTGCTGAGGGAGTCCTCCAAGGACATG +
Preference number: 6 (lower is better)
Translates to: SSPHSGLGNSSS*WPLLRESSKDM
Trigger: CATGTCCTTGGAGGACTCCCTCAGCAGTGGCCACAAAGAGGAGGAATTGCCAAGGCCAGAATGGGGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp CCTGATCCGTCTTCCTCCTCTTACTTGCCAGCTTCTTaGCCCGCCGCAGGGCTTTCTCTGTTTTGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: PDPSSSSYLPAS*PAAGLSLFWVG
Trigger: TCCCACCCAAAACAGAGAAAGCCCTGCGGCGGGCAAAGAAGCTGGCAAGTAAGAGGAGGAAGACGGATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CCACTTTTCCTCTGGGTGTGGCCCACTGTTCTCTGGTaGAAAGTCCCAAACACCTGTCGGGTGATATCCGGG +
Preference number: 6 (lower is better)
Translates to: PLFLWVWPTVLW*KVPNTCRVISG
Trigger: CCCGGATATCACCCGACAGGTGTTTGGGACTTTTCACCAGAGAACAGTGGGCCACACCCAGAGGAAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CTGCCAGGGGGCCCTGCTCTGGGTGTGGACAAAAAGTaGCTCTTGAAACCTGGTGTTTGCTCTTCCCAACAG +
Preference number: 6 (lower is better)
Translates to: LPGGPALGVDKK*LLKPGVCSSQQ
Trigger: CTGTTGGGAAGAGCAAACACCAGGTTTCAAGAGTCACTTTTTGTCCACACCCAGAGCAGGGCCCCCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTGGCTTaGTTGCTGTCCTCTCTAGCTGTGCAGGAAGCTCAA +
Preference number: 6 (lower is better)
Translates to: GLSLFWVGLQVA*LLSSLAVQEAQ
Trigger: TTGAGCTTCCTGCACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp TCTTCCCAACAGTTTTCGGGCTGCCATGGGGGTGGCTaGTCTTCTATGTCACCCTCGGGTAAAGCAATGGTG +
Preference number: 6 (lower is better)
Translates to: SSQQFSGCHGGG*SSMSPSGKAMV
Trigger: CACCATTGCTTTACCCGAGGGTGACATAGAAGACCAGCCACCCCCATGGCAGCCCGAAAACTGTTGGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp AGGGCTTTCTCTGTTTTGGGTGGGACTGCAGGTGGCTaGCTTGCTGTCCTCTCTAGCTGTGCAGGAAGCTCA +
Preference number: 6 (lower is better)
Translates to: RAFSVLGGTAGG*LAVLSSCAGSS
Trigger: TGAGCTTCCTGCACAGCTAGAGAGGACAGCAAGCAAGCCACCTGCAGTCCCACCCAAAACAGAGAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp AATGTTCCGTGCCCTGTGACGGTAACTGGCTCCAAATaGCACTTTTCCTCTGGGTGTGGCCCACTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: NVPCPVTVTGSK*HFSSGCGPLFS
Trigger: AGAGAACAGTGGGCCACACCCAGAGGAAAAGTGGCATTTGGAGCCAGTTACCGTCACAGGGCACGGAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CTGGATTCTTGGAGGACTCCTGTTCTCCGTGCTTCCTaGCTGGCTGGTAGCTGTTCTGATGGGTGTTGGAAA +
Preference number: 6 (lower is better)
Translates to: LDSWRTPVLRAS*LAGSCSDGCWK
Trigger: TTTCCAACACCCATCAGAACAGCTACCAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp AGGGTTCTCTTAGCAAGGTCGTGTCCCCATAGTGCTTaGGAGCTTTGCTTTCTGGGACGGTTCCAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: RVLLARSCPHSA*ELCFLGRFQLC
Trigger: ACACAGCTGGAACCGTCCCAGAAAGCAAAGCTCCCAAGCACTATGGGGACACGACCTTGCTAAGAGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp TGGGACACAGATCTGGAGAGCCCATTCTCTAGCTGGTaGGTCTTCATTTTCTCTGTAGCCCCTCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: WDTDLESPFSSW*VFIFSVAPPGS
Trigger: TGAGCCTGGAGGGGCTACAGAGAAAATGAAGACCCACCAGCTAGAGAATGGGCTCTCCAGATCTGTGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp GTCGCTGAACGCGTCTGTGCACTTCTTATTTCCTTGCATCATCTGTaGGCTCCAAGAAAGCTGTCCTTGTCAGCCGGCAGGTGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VAERVCALLISLHHL*APRKLSLSAGRCLW
Trigger: CCAGAGACACCTGCCGGCTGACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp GATGCTGGAGGAGTCGCTGAACGCGTCTGTGCACTTCTTATTTCCTaGCATCATCTGTTGGCTCCAAGAAAGCTGTCCTTGTCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: DAGGVAERVCALLIS*HHLLAPRKLSLSAG
Trigger: GCCGGCTGACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CATCATCCAACACGCTGCCGATGCTGGAGGAGTCGCTaGACGCGTCTGTGCACTTCTTATTTCCTTGCATCA +
Preference number: 6 (lower is better)
Translates to: HHPTRCRCWRSR*TRLCTSYFLAS
Trigger: TGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTCCTCCAGCATCGGCAGCGTGTTGGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CTGTTCTCTGGTGAAAAGTCCCAAACACCTGTCGGGTaGTATCCGGGGACACAGCCAGATAGGAGTCATGGA +
Preference number: 6 (lower is better)
Translates to: LFSGEKSQTPVG*YPGTQPDRSHG
Trigger: TCCATGACTCCTATCTGGCTGTGTCCCCGGATATCACCCGACAGGTGTTTGGGACTTTTCACCAGAGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp ATTCTTGGAGGACTCCTGTTCTCCGTGCTTCCTGCCTaGCTGGTAGCTGTTCTGATGGGTGTTGGAAACTTC +
Preference number: 6 (lower is better)
Translates to: ILGGLLFSVLPA*LVAVLMGVGNF
Trigger: GAAGTTTCCAACACCCATCAGAACAGCTACCAGCCAGGCAGGAAGCACGGAGAACAGGAGTCCTCCAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CTCTGGGTCATAGAAGGTCTTGATTTTCACCTGGAGTaGCAAGTCGAAGACAAAGTACTCCCCGGACTGCGG +
Preference number: 6 (lower is better)
Translates to: LWVIEGLDFHLE*QVEDKVLPGLR
Trigger: CCGCAGTCCGGGGAGTACTTTGTCTTCGACTTGCCACTCCAGGTGAAAATCAAGACCTTCTATGACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GGACGGGATGGAGACCTTGACATACTTGCCCGTCTCTaGGTCATAGAAGGTCTTGATTTTCACCTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: GRDGDLDILARL*VIEGLDFHLEW
Trigger: CCACTCCAGGTGAAAATCAAGACCTTCTATGACCCAGAGACGGGCAAGTATGTCAAGGTCTCCATCCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp CGCGTCTGTGCACTTCTTATTTCCTTGCATCATCTGTaGGCTCCAAGAAAGCTGTCCTTGTCAGCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: RVCALLISLHHL*APRKLSLSAGR
Trigger: CCTGCCGGCTGACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GAACTGTATGTGCTCTTAACACGCTTCCGCACGTCCTaGAGGTTGAACAGCAGGCTAGGGGCTTTGGACTTG +
Preference number: 6 (lower is better)
Translates to: ELYVLLTRFRTS*RLNSRLGALDL
Trigger: CAAGTCCAAAGCCCCTAGCCTGCTGTTCAACCTCAAGGACGTGCGGAAGCGTGTTAAGAGCACATACAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GGGCTTTCCTCAAGCCCATTGGGGAGGATGACACCGTaGCTCACAGGTTCTTGCTTTCCATCAACCTTACCT +
Preference number: 6 (lower is better)
Translates to: GLSSSPLGRMTP*LTGSCFPSTLP
Trigger: AGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp GAATCGAAGCAGAAGTTGACACTGTTTTCTGGAAGAGGAGCGAATTaGGGAGGATTTTTCAGAGCCGGAGGCTTGCTGGCAGTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: ESKQKLTLFSGRGAN*GGFFRAGGLLAVGL
Trigger: CAGGCCCACTGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTCCAGAAAACAGTGTCAACTTCTGCTTCGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp CATTTGGAGGGCTTTCCTCAAGCCCATTGGGGAGGATaGCACCGTTGCTCACAGGTTCTTGCTTTCCATCAA +
Preference number: 6 (lower is better)
Translates to: HLEGFPQAHWGG*HRCSQVLAFHQ
Trigger: TTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAGCCCTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp GCGTCTGTGCACTTCTTATTTCCTTGCATCATCTGTTaGCTCCAAGAAAGCTGTCCTTGTCAGCCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ASVHFLFPCIIC*LQESCPCQPAG
Trigger: ACCTGCCGGCTGACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp TTAGAAAGCTCATTTGGAGGGCTTTCCTCAAGCCCATaGGGGAGGATGACACCGTTGCTCACAGGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: LESSFGGLSSSP*GRMTPLLTGSC
Trigger: GCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAGCCCTCCAAATGAGCTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS TCA 72 bp TCATCCTTCCGCATCACATTCTCCTTCTCATCCTTCTaGCTGTCACCTGCACTCACATCCTTCCTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SSFRITFSFSSF*LSPALTSFLLS
Trigger: AGACAGGAGGAAGGATGTGAGTGCAGGTGACAGTCAGAAGGATGAGAAGGAGAATGTGATGCGGAAGGATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CTCTGTTACAGCACTGGAAGCTGCAGGTGCCTGCCGTaGTGGGTTTCAGGATCTGTAGTTTTAAAACGTCTT +
Preference number: 6 (lower is better)
Translates to: LCYSTGSCRCLP*WVSGSVVLKRL
Trigger: AAGACGTTTTAAAACTACAGATCCTGAAACCCAGCACGGCAGGCACCTGCAGCTTCCAGTGCTGTAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp CTTTGGACTTGTAGCTGTCTCGAGACTGACATTCACTaGGCTCCTTCTCTTGGTATCCGTTTAGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LWTCSCLETDIH*APSLGIRLAVL
Trigger: CAGGACAGCTAAACGGATACCAAGAGAAGGAGCCCAGTGAATGTCAGTCTCGAGACAGCTACAAGTCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp CAGAAGTTGACACTGTTTTCTGGAAGAGGAGCGAATTaGGGAGGATTTTTCAGAGCCGGAGGCTTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: QKLTLFSGRGAN*GGFFRAGGLLA
Trigger: TGCCAGCAAGCCTCCGGCTCTGAAAAATCCTCCCAAATTCGCTCCTCTTCCAGAAAACAGTGTCAACTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp CGTTGGCTCTCGGTCCTGTCGAAAGATTTAATTAGTGTTGATACTTaGGAGACAGGCTTATTGCTGCTCCTTAGGCCGGAAACTGGCACC +
Preference number: 6 (lower is better)
Translates to: RWLSVLSKDLISVDT*ETGLLLLLRPETGT
Trigger: GGTGCCAGTTTCCGGCCTAAGGAGCAGCAATAAGCCTGTCTCCAAAGTATCAACACTAATTAAATCTTTCGACAGGACCGAGAGCCAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp TCATTTGGAGGGCTTTCCTCAAGCCCATTGGGGAGGATGACACCGTaGCTCACAGGTTCTTGCTTTCCATCAACCTTACCTCTAGTTTTC +
Preference number: 6 (lower is better)
Translates to: SFGGLSSSPLGRMTP*LTGSCFPSTLPLVF
Trigger: GAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAAAGCCCTCCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GAGTCGCTGAACGCGTCTGTGCACTTCTTATTTCCTTaGATCATCTGTTGGCTCCAAGAAAGCTGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ESLNASVHFLFP*IICWLQESCPC
Trigger: ACAAGGACAGCTTTCTTGGAGCCAACAGATGATGCAAGGAAATAAGAAGTGCACAGACGCGTTCAGCGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp CCCATTGGGGAGGATGACACCGTTGCTCACAGGTTCTaGCTTTCCATCAACCTTACCTCTAGTTTTCTCATC +
Preference number: 6 (lower is better)
Translates to: PIGEDDTVAHRF*LSINLTSSFLI
Trigger: GATGAGAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp CTGTCGAAAGATTTAATTAGTGTTGATACTTTGGAGACAGGCTTATaGCTGCTCCTTAGGCCGGAAACTGGCACCTCCAGTCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LSKDLISVDTLETGL*LLLRPETGTSSLLW
Trigger: CCAGAGGAGACTGGAGGTGCCAGTTTCCGGCCTAAGGAGCAGCAATAAGCCTGTCTCCAAAGTATCAACACTAATTAAATCTTTCGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp TTCCTCAAGCCCATTGGGGAGGATGACACCGTTGCTCACAGGTTCTaGCTTTCCATCAACCTTACCTCTAGTTTTCTCATCAAGCACTTT +
Preference number: 6 (lower is better)
Translates to: FLKPIGEDDTVAHRF*LSINLTSSFLIKHF
Trigger: AAAGTGCTTGATGAGAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGGGCTTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp CCATTGGGGAGGATGACACCGTTGCTCACAGGTTCTTaGTTTCCATCAACCTTACCTCTAGTTTTCTCATCA +
Preference number: 6 (lower is better)
Translates to: PLGRMTPLLTGS*FPSTLPLVFSS
Trigger: TGATGAGAAAACTAGAGGTAAGGTTGATGGAAAGCAAGAACCTGTGAGCAACGGTGTCATCCTCCCCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CCA 72 bp TGTTACAGCACTGGAAGCTGCAGGTGCCTGCCGTGCTaGGTTTCAGGATCTGTAGTTTTAAAACGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: CYSTGSCRCLPC*VSGSVVLKRLF
Trigger: AAAAAGACGTTTTAAAACTACAGATCCTGAAACCCAGCACGGCAGGCACCTGCAGCTTCCAGTGCTGTAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374144.8
ENST00000470615.1
CDS CCA 72 bp GTAAAACACATCTTCCTCCTCAGGAGAGAGGGGCCCTaGGAAGAATTTCTGGTTCAAATGTGTGTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: VKHIFLLRREGP*EEFLVQMCVLK
Trigger: CTTCAGAACACACATTTGAACCAGAAATTCTTCCCAGGGCCCCTCTCTCCTGAGGAGGAAGATGTGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS GCA 72 bp GAAGAATTTCTGGTTCAAATGTGTGTTCTGAAGTCCTaGTTCCCTCTCAGGTTCTGTCTCTTGGGACACAGA +
Preference number: 6 (lower is better)
Translates to: EEFLVQMCVLKS*FPLRFCLLGHR
Trigger: TCTGTGTCCCAAGAGACAGAACCTGAGAGGGAAGCAGGACTTCAGAACACACATTTGAACCAGAAATTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp GATTTAATTAGTGTTGATACTTTGGAGACAGGCTTATaGCTGCTCCTTAGGCCGGAAACTGGCACCTCCAGT +
Preference number: 6 (lower is better)
Translates to: DLISVDTLETGL*LLLRPETGTSS
Trigger: ACTGGAGGTGCCAGTTTCCGGCCTAAGGAGCAGCAATAAGCCTGTCTCCAAAGTATCAACACTAATTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 90 bp AGAGGCAGCATGATAGGTTTAATTACGGGGGTAGCTCTGAGGGTGTaGTCTTTAATCGTAAACAGCATGTGCCTGTTTGAAGCAGAAGAT +
Preference number: 6 (lower is better)
Translates to: RGSMIGLITGVALRV*SLIVNSMCLFEAED
Trigger: ATCTTCTGCTTCAAACAGGCACATGCTGTTTACGATTAAAGACAACACCCTCAGAGCTACCCCCGTAATTAAACCTATCATGCTGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8
CDS CAA 72 bp ATGATAGGTTTAATTACGGGGGTAGCTCTGAGGGTGTaGTCTTTAATCGTAAACAGCATGTGCCTGTTTGAA +
Preference number: 6 (lower is better)
Translates to: MIGLITGVALRV*SLIVNSMCLFE
Trigger: TTCAAACAGGCACATGCTGTTTACGATTAAAGACAACACCCTCAGAGCTACCCCCGTAATTAAACCTATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374144.8