RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C10ORF53 (Homo sapiens)

Ensembl gene IDs: ENSG00000178645

Ensembl transcript IDs: ENST00000374111.8, ENST00000374112.7, ENST00000374113.3, ENST00000535836.1

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGATGGTTAGGACTGCTCTCAGAGCAGGTGAAGCCGCAGGTCTCTaGGCGATCCTGAAAGCCCTGCTCCTTCAGCACAGGTGCCCCGGG +
Preference number: 1 (lower is better)
Translates to: AMVRTALRAGEAAGL*AILKALLLQHRCPG
Trigger: CCCGGGGCACCTGTGCTGAAGGAGCAGGGCTTTCAGGATCGCTCAGAGACCTGCGGCTTCACCTGCTCTGAGAGCAGTCCTAACCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR TCA 90 bp GGACTGCTCTCAGAGCAGGTGAAGCCGCAGGTCTCTGAGCGATCCTaGAAGCCCTGCTCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTT +
Preference number: 1 (lower is better)
Translates to: GLLSEQVKPQVSERS*KPCSFSTGAPGPEF
Trigger: AAACTCTGGACCCGGGGCACCTGTGCTGAAGGAGCAGGGCTTTCAGGATCGCTCAGAGACCTGCGGCTTCACCTGCTCTGAGAGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR GCA 90 bp AGGGTAGGAGGCACAAAGACGTGGGGCGTGGGGGAGGTGACATGCTaGTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGACAC +
Preference number: 1 (lower is better)
Translates to: RVGGTKTWGVGEVTC*CFEELYDPPKTHRH
Trigger: GTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCCTACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTaGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTAT +
Preference number: 1 (lower is better)
Translates to: GTSAMVGSRVGGTKT*GVGEVTCCCFEELY
Trigger: ATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp GTAGGAGGCACAAAGACGTGGGGCGTGGGGGAGGTGACATGCTGCTaGTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGACACACA +
Preference number: 1 (lower is better)
Translates to: VGGTKTWGVGEVTCC*FEELYDPPKTHRHT
Trigger: TGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp TCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGGGGGAGGTGACATaGTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGA +
Preference number: 1 (lower is better)
Translates to: SRVGGTKTWGVGEVT*CCFEELYDPPKTHR
Trigger: TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCCTACCCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp GTTCAGGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATaGTCATGCTGCCGAGGCCAGAAACGGCAGCTTACCCCATTAACC +
Preference number: 1 (lower is better)
Translates to: VQAVSYHKTRPGRSP*SCCRGQKRQLTPLT
Trigger: GGTTAATGGGGTAAGCTGCCGTTTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATaGTGCCGAGGCCAGAAACGGCAGCTTACCCCATTAACCTTGCTA +
Preference number: 1 (lower is better)
Translates to: AVSYHKTRPGRSPWS*CRGQKRQLTPLTLL
Trigger: TAGCAAGGTTAATGGGGTAAGCTGCCGTTTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp ACACACACACACAGATATAGGGTGCCAGGCATTCATCAGAGCCTATaGAGAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTC +
Preference number: 1 (lower is better)
Translates to: THTHRYRVPGIHQSL*RARLQGTREGSPPF
Trigger: GAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 90 bp GGGAGAGAAGGGAGAAGGGGAAAGATTATGGTAGGAGTTGCTGCTTaGGTTGGGCAGCATTTACCAGGTGGAGAAGGGGATGCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: GREGRRGKIMVGVAA*VGQHLPGGEGDARR
Trigger: CCTCCTGGCATCCCCTTCTCCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACCATAATCTTTCCCCTTCTCCCTTCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp GTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTaGCGAGGCCAGAAACGGCAGCTTACCCCATTAACCTTGCTAGAT +
Preference number: 1 (lower is better)
Translates to: VSYHKTRPGRSPWSC*RGQKRQLTPLTLLD
Trigger: ATCTAGCAAGGTTAATGGGGTAAGCTGCCGTTTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 90 bp GAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATaGAGCCAAGGAGGGCAGGTCTTCTTCACTTGTAGTGCTACTCTG +
Preference number: 1 (lower is better)
Translates to: ESVYCLALPALQLWS*SQGGQVFFTCSATL
Trigger: CAGAGTAGCACTACAAGTGAAGAAGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR TCA 90 bp TGGAGAAGCAGGCTGGATAAAATACAGGGACACAAGGAGAGGCTCTaGAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: WRSRLDKIQGHKERL*SQRFRPCHTTKPGL
Trigger: CAGGCCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTGTGTCCCTGTATTTTATCCAGCCTGCTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp AATACAGTTGTAGAGACTCAGAGCTGGGGAGAATCACGTTGGGTTTaGCACAGGTTGCCTGTGGGACATCTAGCTGGAGAGGTTCGGGAG +
Preference number: 1 (lower is better)
Translates to: NTVVETQSWGESRWV*HRLPVGHLAGEVRE
Trigger: CTCCCGAACCTCTCCAGCTAGATGTCCCACAGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTACAACTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp TGCTGGGAGAGAAGGGAGAAGGGGAAAGATTATGGTAGGAGTTGCTaGTTGAGTTGGGCAGCATTTACCAGGTGGAGAAGGGGATGCCAG +
Preference number: 1 (lower is better)
Translates to: CWERREKGKDYGRSC*LSWAAFTRWRRGCQ
Trigger: CTGGCATCCCCTTCTCCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACCATAATCTTTCCCCTTCTCCCTTCTCTCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp TGCCTGTTCCATGAGGAGATCAGTAGGCATTCAGCACGGCTATCCTaGCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCTAGGG +
Preference number: 1 (lower is better)
Translates to: CLFHEEISRHSARLS*PFHTVGLVYHRLLG
Trigger: CCCTAGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGCCAGGATAGCCGTGCTGAATGCCTACTGATCTCCTCATGGAACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR CCA 90 bp CCACAAGCCCTAGAGTTGAGGTCTAGGGCCAGTGCATTCCCCTGGTaGAGCATGGGTTACTTGCTCATGTCAAGACTCTGTTTCCACCAA +
Preference number: 1 (lower is better)
Translates to: PQALELRSRASAFPW*SMGYLLMSRLCFHQ
Trigger: TTGGTGGAAACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCACCAGGGGAATGCACTGGCCCTAGACCTCAACTCTAGGGCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp TTGCCACAAGCCCTAGAGTTGAGGTCTAGGGCCAGTGCATTCCCCTaGTGGAGCATGGGTTACTTGCTCATGTCAAGACTCTGTTTCCAC +
Preference number: 1 (lower is better)
Translates to: LPQALELRSRASAFP*WSMGYLLMSRLCFH
Trigger: GTGGAAACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCACCAGGGGAATGCACTGGCCCTAGACCTCAACTCTAGGGCTTGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp AGAAGGGAGAAGGGGAAAGATTATGGTAGGAGTTGCTGCTTGAGTTaGGCAGCATTTACCAGGTGGAGAAGGGGATGCCAGGAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: RREKGKDYGRSCCLS*AAFTRWRRGCQEGR
Trigger: TCTGCCCTCCTGGCATCCCCTTCTCCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACCATAATCTTTCCCCTTCTCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp CACACACAGACACACACACACACACACACACACACAGATATAGGGTaGCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAA +
Preference number: 1 (lower is better)
Translates to: HTQTHTHTHTHTDIG*QAFIRAYAEQGCRE
Trigger: TTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374112.7
3UTR GCA 90 bp CACACAGACACACACACACACACACACACACACACAGATATAGGGTaGCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAA +
Preference number: 1 (lower is better)
Translates to: HTDTHTHTHTHTDIG*QAFIRAYAEQGCRE
Trigger: TTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535836.1
3UTR CCA 90 bp TGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTGGCAGGATaGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTTGTTGAGG +
Preference number: 1 (lower is better)
Translates to: WPSSNCWVLCPGLAG*SIDCHPLLTVCLLR
Trigger: CCTCAACAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 90 bp GAAGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTaGGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTGGGGGCTG +
Preference number: 1 (lower is better)
Translates to: EEMPNPKAGRKHWHC*EKGRSVHFRRWWGL
Trigger: CAGCCCCCACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp AACTGTTGGGTGTTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTaGCATCCTTTGTTAACTGTGTGTTTGTTGAGGGCTCACTATGGG +
Preference number: 1 (lower is better)
Translates to: NCWVLCPGLAGWSID*HPLLTVCLLRAHYG
Trigger: CCCATAGTGAGCCCTCAACAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAACACCCAACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 90 bp CAGAGTAACGAGATAGGAATCCAGTTAAACAGCTTGGGGAAGAGATaGCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAA +
Preference number: 1 (lower is better)
Translates to: QSNEIGIQLNSLGKR*QIPKQGESTGIVEK
Trigger: TTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCTTCCCCAAGCTGTTTAACTGGATTCCTATCTCGTTACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp GTCAAGGTTTATAGCTGTGAGCAACAGAGCTGGTTCTGGCTGAGATaGGCTCAAAAGGAATTGTTTGAGAGGAAACCAGGATCTCAAGGA +
Preference number: 1 (lower is better)
Translates to: VKVYSCEQQSWFWLR*AQKELFERKPGSQG
Trigger: TCCTTGAGATCCTGGTTTCCTCTCAAACAATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 90 bp AGTGTCTCAGTCAAGGTTTATAGCTGTGAGCAACAGAGCTGGTTCTaGCTGAGATGGGCTCAAAAGGAATTGTTTGAGAGGAAACCAGGA +
Preference number: 1 (lower is better)
Translates to: SVSVKVYSCEQQSWF*LRWAQKELFERKPG
Trigger: TCCTGGTTTCCTCTCAAACAATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGACTGAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 90 bp AGTTCACTTCAGAAGATGGTGGGGGCTGTCCCCAAGTTCCCAAATTaGGTAAGTAGTTCATCGATCATAACTTCAACACGGGAATACAGT +
Preference number: 1 (lower is better)
Translates to: SSLQKMVGAVPKFPN*VSSSSIITSTREYS
Trigger: ACTGTATTCCCGTGTTGAAGTTATGATCGATGAACTACTTACTCAATTTGGGAACTTGGGGACAGCCCCCACCATCTTCTGAAGTGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 90 bp ACACACTTTACTGTGTGGTTTTGGATACTCTCCTGTGTGTGCCACTaGAAGCACAGGGCTTTCAGTACAAGTTTCAAACTCAGAAAGAAA +
Preference number: 1 (lower is better)
Translates to: THFTVWFWILSCVCH*KHRAFSTSFKLRKK
Trigger: TTTCTTTCTGAGTTTGAAACTTGTACTGAAAGCCCTGTGCTTTCAGTGGCACACACAGGAGAGTATCCAAAACCACACAGTAAAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR GCA 90 bp TCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATaGTTCTGGCAACTATGTGTTATTAGTCAGGAATGGCACCTTGTT +
Preference number: 1 (lower is better)
Translates to: SPVLSTLSTKQWNLR*FWQLCVISQEWHLV
Trigger: AACAAGGTGCCATTCCTGACTAATAACACATAGTTGCCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CCA 90 bp TTGGTTAGCTTTATATACAATTTGTTATCATATCAGACATACCTATaGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGGGCTGGTAAA +
Preference number: 1 (lower is better)
Translates to: LVSFIYNLLSYQTYL*LPPRVHFQRPWAGK
Trigger: TTTACCAGCCCATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAGCTAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR CCA 90 bp CTCTCTTTAATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATaGAATCTCAGATGCTTCTGGCAACTATGTGTTATTAGTCAGGAA +
Preference number: 1 (lower is better)
Translates to: LSLISPVLSTLSTKQ*NLRCFWQLCVISQE
Trigger: TTCCTGACTAATAACACATAGTTGCCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAATTAAAGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGGGGAGCCCACCGTTCTaGTGGGAGAGAAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVGSPPF*WERREK
Trigger: CTTCTCCCTTCTCTCCCAGCAGAACGGTGGGCTCCC...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGACACAAGGAGAGGCTCTaGAGCCAGAGGTTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRHKERL*SQRFRP
Trigger: CGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTGTG...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGGGATGTAGCTGCCGCTaGCAGAGCCACAGAACACAT +
Preference number: 2 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVGCSCR*QSHRTH
Trigger: ATGTGTTCTGTGGCTCTGGCAGCGGCAGCTACATCC...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGGCAGCATTTACCAGGTaGAGAAGGGGATGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVAAFTR*RRGCQE
Trigger: CTCCTGGCATCCCCTTCTCCACCTGGTAAATGCTGC...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp GGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTaGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGGGCAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GARMSSTLKHRALLP*MGSKLCLLLLGREV
Trigger: CACCTCCCTGCCCAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR GCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGGGATGTAGCTGCCGCTaGCAGAGCCACAGAACACAT +
Preference number: 2 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQGCSCR*QSHRTH
Trigger: ATGTGTTCTGTGGCTCTGGCAGCGGCAGCTACATCC...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGCCAGTGTCCACACCGTaGCACAGCCACTTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGPVSTP*HSHFCL
Trigger: CAGGCAGAAGTGGCTGTGCCACGGTGTGGACACTGG...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAAGTAGAGACTCAGAGCTaGGGAGAATCACGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: EQGCREPERGAHRSAGREVETQS*GESRWV
Trigger: AACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGACACTTCAGAAGATGGTaGGGGCTGTCCCCAAGTTCC +
Preference number: 2 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRHFRRW*GLSPSS
Trigger: GGAACTTGGGGACAGCCCCCACCATCTTCTGAAGTG...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTTGTGAGCAACAGAGCTaGTTCTGGCTGAGATGGGCT +
Preference number: 2 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPCEQQS*FWLRWA
Trigger: AGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACA...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAAAGTTGCTGCTTGAGTTaGGCAGCATTTACCAGGTGG +
Preference number: 2 (lower is better)
Translates to: EQGCREPERGAHRSAGRESCCLS*AAFTRW
Trigger: CCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACT...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp GTAGAGACTCAGAGCTGGGGAGAATCACGTTGGGTTTGCCACAGGTaGCCTGTGGGACATCTAGCTGGAGAGGTTCGGGAGATGTGGGAC +
Preference number: 2 (lower is better)
Translates to: VETQSWGESRWVCHR*PVGHLAGEVREMWD
Trigger: GTCCCACATCTCCCGAACCTCTCCAGCTAGATGTCCCACAGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTACAGCCACTTCTGCCTaGATCATAGAATGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSTATSA*IIEWLG
Trigger: CCCCAGCCATTCTATGATGCAGGCAGAAGTGGCTGT...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGAAATCACTTAGGGCTGTaGGGTGGGCAGTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRNHLGL*GGQWAR
Trigger: CCTGGCCCACTGCCCACCCCACAGCCCTAAGTGATT...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTaGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: HEGARMSSTLKHRAL*PLMGSKLCLLLLGR
Trigger: CCTGCCCAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGCAGGGAACAGGTGAGTaGGGCTCAGATCGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWQGTGE*GSDRKG
Trigger: CCCTTTACGATCTGAGCCTCACTCACCTGTTCCCTG...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTAGTTCCCACTCCAAATaGAGACAGGGGAAGCTAGCA +
Preference number: 2 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSSSHSK*RQGKLA
Trigger: TGCTAGCTTCCCCTGTCTGCATTTGGAGTGGGAACT...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR GCA 90 bp CATGAGGAGATCAGTAGGCATTCAGCACGGCTATCCTGGCCTTTTCACACAGTGCGCACAGTGCCAGCCTaGCAGGCCAGAAGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: HEEISRHSARLSWPFHTVRTVPA*QARSSH
Trigger: ATGAGAGCTTCTGGCCTGGCAGGCTGGCACTGTGCG...CACTGTGTGAAAAGGCCAGGATAGCCGTGCTGAATGCCTACTGATCTCCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR GCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAATATGGTAGGAGTTGCTaGTTGAGTTGGGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: EQGCREPERGAHRSAGREYGRSC*LSWAAF
Trigger: AAATGCTGCCCAACTCAAGCAGCAACTCCTACCATA...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGCCAGTGTCCACACCGTaGCACAGCCACTTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALPVSTP*HSHFCL
Trigger: CAGGCAGAAGTGGCTGTGCCACGGTGTGGACACTGG...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGCAGCCATGTGGCGAGTaGTTTGCAGGAGGAGATAAT +
Preference number: 2 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQQPCGE*FAGGDN
Trigger: ATTATCTCCTCCTGCAAACCACTCGCCACATGGCTG...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGCCAGTGCATTCCCCTaGTGGAGCATGGGTTACTTG +
Preference number: 2 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWASAFP*WSMGYL
Trigger: CAAGTAACCCATGCTCCACCAGGGGAATGCACTGGC...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTGCTGGAGAAGCAGGCTaGATAAAATACAGGGACACA +
Preference number: 2 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPAGEAG*IKYRDT
Trigger: TGTGTCCCTGTATTTTATCCAGCCTGCTTCTCCAGC...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGACAGGATCTCAAGGACTaGCCTAGAAGGCTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRQDLKD*PRRLEK
Trigger: CTTCTCCAGCCTTCTAGGCCAGTCCTTGAGATCCTG...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTGGAGGCACAAAGACGTaGGGCGTGGGGGAGGTGACA +
Preference number: 2 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCGGTKT*GVGEVT
Trigger: TGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCC...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGCGAGTTGCCCTGTTCTaGCTAGCAGAGCCCAGTGTC +
Preference number: 2 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRRVALF*LAEPSV
Trigger: GACACTGGGCTCTGCTAGTCAGAACAGGGCAACTCG...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGGTCCCCAGTGGTCTTTaGAGTTCTGGGGTGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALVPSGL*SSGVQE
Trigger: CTCCTGCACCCCAGAACTTCAAAGACCACTGGGGAC...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGAAGAGCTGGTTCTGGCTaGGATGGGCTCAAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRRAGSG*DGLKRN
Trigger: ATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCT...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTCTCCTTCAGCACAGGTaGCCCGGGTCCAGAGTTTTC +
Preference number: 2 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFLLQHR*PGSRVF
Trigger: GAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGAG...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGGGGAGCCCACCGTTCTaGTGGGAGAGAAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVGSPPF*WERREK
Trigger: CTTCTCCCTTCTCTCCCAGCAGAACGGTGGGCTCCC...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGGGCTGCCTGGGGCGATaGTTAGGACTGCTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: FYSRGTREPSHILLRTLLGCLGR*LGLLSE
Trigger: CTCTGAGAGCAGTCCTAACCATCGCCCCAGGCAGCC...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGTCAGCACGGCTATCCTaGCCTTTTCACACAGTGGGT +
Preference number: 2 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGSARLS*PFHTVG
Trigger: ACCCACTGTGTGAAAAGGCCAGGATAGCCGTGCTGA...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTTGTGGGACATCTAGCTaGAGAGGTTCGGGAGATGTG +
Preference number: 2 (lower is better)
Translates to: SKNATLALEQLLGVVSRACGTSS*RGSGDV
Trigger: CACATCTCCCGAACCTCTCCAGCTAGATGTCCCACA...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTTGGGGAGAATCACGTTaGGTTTGCCACAGGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SKNATLALEQLLGVVSRAWGESR*VCHRLP
Trigger: AGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCA...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTGTTCACTTCAGAAGATaGTGGGGGCTGTCCCCAAGT +
Preference number: 2 (lower is better)
Translates to: SKNATLALEQLLGVVSRAVHFRR*WGLSPS
Trigger: ACTTGGGGACAGCCCCCACCATCTTCTGAAGTGAAC...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGATCCCCTGGTGGAGCATaGGTTACTTGCTCATGTCAA +
Preference number: 2 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRSPGGA*VTCSCQ
Trigger: TTGACATGAGCAAGTAACCCATGCTCCACCAGGGGA...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp CCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTTGAATCACTTAGGGCTGTaGGGTGGGCAGTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PGLAGWSIDCHPLLTVCLNHLGL*GGQWAR
Trigger: CCTGGCCCACTGCCCACCCCACAGCCCTAAGTGATT...CAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp GAATACAGTTGTAGAGACTCAGAGCTGGGGAGAATCACGTTGGGTTaGCCACAGGTTGCCTGTGGGACATCTAGCTGGAGAGGTTCGGGA +
Preference number: 2 (lower is better)
Translates to: EYSCRDSELGRITLG*PQVACGTSSWRGSG
Trigger: TCCCGAACCTCTCCAGCTAGATGTCCCACAGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTACAACTGTATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp GCTGCCAGAGCCACAGAACACATCATTCCTTCTCTTACCATCCTTTaGCCACAAGCCCTAGAGTTGAGGTCTAGGGCCAGTGCATTCCCC +
Preference number: 2 (lower is better)
Translates to: AARATEHIIPSLTIL*PQALELRSRASAFP
Trigger: GGGGAATGCACTGGCCCTAGACCTCAACTCTAGGGCTTGTGGCAAAAGGATGGTAAGAGAAGGAATGATGTGTTCTGTGGCTCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGAAGCACTGGCATTGTTaGGAAAAGGGCAGATCAGTT +
Preference number: 2 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQKHWHC*EKGRSV
Trigger: AACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTT...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAAAGCACTGGCATTGTTaGGAAAAGGGCAGATCAGTT +
Preference number: 2 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRKHWHC*EKGRSV
Trigger: AACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTT...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCGGGCAGCTGCTGTTGTaGCGACTTGAGATGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLGQLLL*RLEMPV
Trigger: AACAGGCATCTCAAGTCGGCACAACAGCAGCTGCCC...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCAATGGCTGGGGCAGCTaGTGTTGTGCCGACTTGAGA +
Preference number: 2 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLNGWGS*CCADLR
Trigger: TCTCAAGTCGGCACAACAGCAGCTGCCCCAGCCATT...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCTTCTGTGGGCTCCTGTaGAGCCAGGTGACAATCCTG +
Preference number: 2 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLFCGLL*SQVTIL
Trigger: CAGGATTGTCACCTGGCTGCACAGGAGCCCACAGAA...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGATGTGGGACATCTAGCTaGAGAGGTTCGGGAGATGTG +
Preference number: 2 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRCGTSS*RGSGDV
Trigger: CACATCTCCCGAACCTCTCCAGCTAGATGTCCCACA...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTATTTTAGCAGCCATGTaGCGAGTGGTTTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SKNATLALEQLLGVVSRAILAAM*RVVCRR
Trigger: CCTCCTGCAAACCACTCGCCACATGGCTGCTAAAAT...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGATGTGAGCAACAGAGCTaGTTCTGGCTGAGATGGGCT +
Preference number: 2 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGCEQQS*FWLRWA
Trigger: AGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACA...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TTGAGGAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACGCAGCATTTACCAGGTaGAGAAGGGGATGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LRSSMTLPRHTDTHTHTHAAFTR*RRGCQE
Trigger: CTCCTGGCATCCCCTTCTCCACCTGGTAAATGCTGC...GTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535836.1
3UTR-3UTR TCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGTTTCCTTTTGTGAAATaGACCCCTTTCCCACAATCT +
Preference number: 2 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPFPFVK*TPFPQS
Trigger: AGATTGTGGGAAAGGGGTTCATTTCACAAAAGGAAA...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGACCCAAGTTCCCAAATTaGGTAAGTAGTTCATCGATC +
Preference number: 2 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRPKFPN*VSSSSI
Trigger: GATCGATGAACTACTTACTCAATTTGGGAACTTGGG...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTGGCTTCCACCCAGAGTaGATTTTCAAAGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFGFHPE*IFKGHG
Trigger: CCCATGGCCTTTGAAAATGCACTCTGGGTGGAAGCC...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR GCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGAATCACGTTGGGTTTaGCACAGGTTGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVESRWV*HRLPVG
Trigger: TCCCACAGGCAACCTGTGGCAAACCCAACGTGATTC...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTATGGGGAGAATCACGTTaGGTTTGCCACAGGTTGCCT +
Preference number: 2 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVWGESR*VCHRLP
Trigger: AGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCA...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGAATTTTAGCAGCCATGTaGCGAGTGGTTTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRILAAM*RVVCRR
Trigger: CCTCCTGCAAACCACTCGCCACATGGCTGCTAAAAT...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACTGGCCTAGAAGGCTaGAGAAGCAGGCTGGATAAA +
Preference number: 2 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGTGLEG*RSRLDK
Trigger: TTTATCCAGCCTGCTTCTCCAGCCTTCTAGGCCAGT...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp GGAAGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTaGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: GRDAKSQSRAKALAL*RKGQISSLQKMVGA
Trigger: AGCCCCCACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp TGGGGAAGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATaGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTGGGG +
Preference number: 2 (lower is better)
Translates to: WGRDAKSQSRAKALA*LRKGQISSLQKMVG
Trigger: CCCCACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTAGCTCAATGTGTACCTaGTATTGGAGGGCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFSSMCT*YWRALP
Trigger: AGGGAGAGCCCTCCAATATCAGGTACACATTGAGCT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR TCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATGCTCTCAGAGCAGGTaGAGCCGCAGGTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKCSQSR*SRRSLS
Trigger: GCTCAGAGACCTGCGGCTTCACCTGCTCTGAGAGCA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR TCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGATCAACTCTGACAAGTaGAGCTTGGGCTGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: HEGARMSSTLKHRALLPLINSDK*SLGWGF
Trigger: AAAACCCCAGCCCAAGCTTCACTTGTCAGAGTTGAT...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGCAGAGGAAACCTCGGTaGTTTTTCCCAGCAATGCTG +
Preference number: 2 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLQRKPR*FFPAML
Trigger: CAGCATTGCTGGGAAAAATCACCGAGGTTTCCTCTG...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGGTTCCTCTTAATCAGTaGCAGAGGAGGATAAGGCCA +
Preference number: 2 (lower is better)
Translates to: HEGARMSSTLKHRALLPLVPLNQ*QRRIRP
Trigger: TGGCCTTATCCTCCTCTGTCACTGATTAAGAGGAAC...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR GCA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGGAATCACGTTGGGTTTaGCACAGGTTGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: RDAKSQSRAKALALLRKGESRWV*HRLPVG
Trigger: TCCCACAGGCAACCTGTGGCAAACCCAACGTGATTC...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGGGAGGGCTCTCCCTATaGGTTGAGATTGAGACATGT +
Preference number: 2 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRGGLSL*VEIETC
Trigger: ACATGTCTCAATCTCAACCCATAGGGAGAGCCCTCC...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CCA 90 bp TTGAGGAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACACTGGCCTAGAAGGCTaGAGAAGCAGGCTGGATAAA +
Preference number: 2 (lower is better)
Translates to: LRSSMTLPRHTDTHTHTHTGLEG*RSRLDK
Trigger: TTTATCCAGCCTGCTTCTCCAGCCTTCTAGGCCAGT...GTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535836.1
3UTR-3UTR CCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTACAACAGAGCTGGTTCTaGCTGAGATGGGCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVQQSWF*LRWAQK
Trigger: CTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTG...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGAGGGTCTCTTATGCCTaGCTGAAGAGTTTAAATTTT +
Preference number: 2 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVRVSYA*LKSLNF
Trigger: AAAATTTAAACTCTTCAGCCAGGCATAAGAGACCCT...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp TCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTaGCGCCCTCCTCAGACGATATTAATGCAAAAGAAGGCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: SRGTREPSHILLRTL*RPPQTILMQKKAGH
Trigger: ATGACCTGCCTTCTTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CAA 90 bp CTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTaGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: LAGWSIDCHPLLTVC*LRAHYGTSAMVGSR
Trigger: CCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 90 bp GTGTTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTaGTTAACTGTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCT +
Preference number: 2 (lower is better)
Translates to: VLCPGLAGWSIDCHP*LTVCLLRAHYGTSA
Trigger: AGCACTTGTCCCATAGTGAGCCCTCAACAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGAGAGCTGGTTCTGGCTaGGATGGGCTCAAAAGGAAT +
Preference number: 2 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVRAGSG*DGLKRN
Trigger: ATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCT...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp GCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCTAGGGAAACAGATATAGGGCAGCTGCTGTTGTaGCGACTTGAGATGCCTGTT +
Preference number: 2 (lower is better)
Translates to: AFSHSGSSLPSPPRETDIGQLLL*RLEMPV
Trigger: AACAGGCATCTCAAGTCGGCACAACAGCAGCTGCCC...TATATCTGTTTCCCTAGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR GCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGAGTAAAGGGTCTCTTATaGCTGGCTGAAGAGTTTAAA +
Preference number: 2 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRVKGLL*LAEEFK
Trigger: TTTAAACTCTTCAGCCAGGCATAAGAGACCCTTTAC...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGCACACAGATATAGGGTaGCAGGCATTCATCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVHTDIG*QAFIRA
Trigger: GGCTCTGATGAATGCCTGGCACCCTATATCTGTGTG...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp CCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTTGGAGGTGACATGCTGCTaGTTTGAGGAGCTCTATGAC +
Preference number: 2 (lower is better)
Translates to: PGLAGWSIDCHPLLTVCLEVTCC*FEELYD
Trigger: GTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC...CAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTCCCTCTTTAACTCTATaGGGCTGTGTTCTACTCCAG +
Preference number: 2 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFPSLTL*GCVLLQ
Trigger: CTGGAGTAGAACACAGCCCCATAGAGTTAAAGAGGG...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGTGGTCTTTGAAGTTCTaGGGTGCAGGAGGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: FYSRGTREPSHILLRTLLWSLKF*GAGGFE
Trigger: CTCAAACCCTCCTGCACCCCAGAACTTCAAAGACCA...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACAGTTCACTTCAGAAGATaGTGGGGGCTGTCCCCAAGT +
Preference number: 2 (lower is better)
Translates to: DDFSSHVASGLQEEIMETVHFRR*WGLSPS
Trigger: ACTTGGGGACAGCCCCCACCATCTTCTGAAGTGAAC...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGCAGCCATGTGGCGAGTaGTTTGCAGGAGGAGATAAT +
Preference number: 2 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVQPCGE*FAGGDN
Trigger: ATTATCTCCTCCTGCAAACCACTCGCCACATGGCTG...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR TCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAGCTGTTGTGCCGACTTaGGATGCCTGTTCCATGAGG +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKAVVPT*DACSMR
Trigger: CCTCATGGAACAGGCATCTCAAGTCGGCACAACAGC...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR TCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGACCCAAGTTCCCAAATTaGGTAAGTAGTTCATCGATC +
Preference number: 2 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRPKFPN*VSSSSI
Trigger: GATCGATGAACTACTTACTCAATTTGGGAACTTGGG...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGAAAACGGGCAGATCAATaGTTGGGAAAGATGATTTTA +
Preference number: 2 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRKRADQ*LGKMIL
Trigger: TAAAATCATCTTTCCCAAGCATTGATCTGCCCGTTT...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGACACACTTTACTGTGTaGTTTTGGATACTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGTHFTV*FWILSC
Trigger: ACAGGAGAGTATCCAAAACCACACAGTAAAGTGTGT...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACAGTAGAGACTCAGAGCTaGGGAGAATCACGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: DDFSSHVASGLQEEIMETVETQS*GESRWV
Trigger: AACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp GCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCTAGGGAAACAGATATATGGCACAGCCACTTCTaGCTGCATCATAGAATGGCT +
Preference number: 2 (lower is better)
Translates to: AFSHSGSSLPSPPRETDIWHSHF*LHHRMA
Trigger: AGCCATTCTATGATGCAGGCAGAAGTGGCTGTGCCA...TATATCTGTTTCCCTAGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR GCA 90 bp GCTGCTCTCGAACTCCTGTGTTCAAACAAATCCACCCACCTTGGATTCCCAAAGAAGATTCAACATACCTaGCCATGTACCCCCTGTATC +
Preference number: 2 (lower is better)
Translates to: AALELLCSNKSTHLGFPKKIQHT*PCTPCI
Trigger: GATACAGGGGGTACATGGGCAGGTATGTTGAATCTT...CTTTGGGAATCCAAGGTGGGTGGATTTGTTTGAACACAGGAGTTCGAGAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGAGCTCAATGTGTACCTaGTATTGGAGGGCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: IISDIPMASTQSAFSKAMSSMCT*YWRALP
Trigger: AGGGAGAGCCCTCCAATATCAGGTACACATTGAGCT...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR TCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATGTCTCTGAGCGATCCTaGAAGCCCTGCTCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: KSFGHESRNHSSRERFPDVSERS*KPCSFS
Trigger: GCTGAAGGAGCAGGGCTTTCAGGATCGCTCAGAGAC...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR GCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTATTCTGTGGGCTCCTGTaGAGCCAGGTGACAATCCTG +
Preference number: 2 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLFCGLL*SQVTIL
Trigger: CAGGATTGTCACCTGGCTGCACAGGAGCCCACAGAA...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGCAATGGAATCTCAGATaGTTCTGGCAACTATGTGTT +
Preference number: 2 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALQWNLR*FWQLCV
Trigger: AACACATAGTTGCCAGAAGCATCTGAGATTCCATTG...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR GCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATGTGCCGACTTGAGATaGCTGTTCCATGAGGAGATC +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKCADLR*LFHEEI
Trigger: GATCTCCTCATGGAACAGGCATCTCAAGTCGGCACA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAACCCTCTTTAACTCTATaGGGCTGTGTTCTACTCCAG +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKPSLTL*GCVLLQ
Trigger: CTGGAGTAGAACACAGCCCCATAGAGTTAAAGAGGG...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAGTGCAAGCAGTTTCATaGTCCCCAGTGGTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKVQAVS*SPVVFE
Trigger: TTCAAAGACCACTGGGGACCATGAAACTGCTTGCAC...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp TTGAGGAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACTATTCACCCTTATTCTaGAAACAGACCCACCATTTT +
Preference number: 2 (lower is better)
Translates to: LRSSMTLPRHTDTHTHTHYSPLF*KQTHHF
Trigger: AAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATA...GTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535836.1
3UTR-3UTR TCA 90 bp CTTTATATACAATTTGTTATCATATCAGACATACCTATGGCTTCCACCCAGAGTCGAGTTGCCCTGTTCTaGCTAGCAGAGCCCAGTGTC +
Preference number: 2 (lower is better)
Translates to: LYIQFVIISDIPMASTQSRVALF*LAEPSV
Trigger: GACACTGGGCTCTGCTAGTCAGAACAGGGCAACTCG...ACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR TCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATTTTCCTTTTGTGAAATaGACCCCTTTCCCACAATCT +
Preference number: 2 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNFPFVK*TPFPQS
Trigger: AGATTGTGGGAAAGGGGTTCATTTCACAAAAGGAAA...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTAGGAGGGCTCTCCCTATaGGTTGAGATTGAGACATGT +
Preference number: 2 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLGGLSL*VEIETC
Trigger: ACATGTCTCAATCTCAACCCATAGGGAGAGCCCTCC...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGAGTGTCATGCACTGCTaGCATATCAACTCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: IISDIPMASTQSAFSKAMSVMHC*HINSVS
Trigger: AGACACTGAGTTGATATGCCAGCAGTGCATGACACT...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTATTCACCCTTATTCTaGAAACAGACCCACCATTTT +
Preference number: 2 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCYSPLF*KQTHHF
Trigger: AAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATA...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR GCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATAATGGCTGGGGCAGCTaGTGTTGTGCCGACTTGAGA +
Preference number: 2 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNNGWGS*CCADLR
Trigger: TCTCAAGTCGGCACAACAGCAGCTGCCCCAGCCATT...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATTGGCACAGCCACTTCTaGCTGCATCATAGAATGGCT +
Preference number: 2 (lower is better)
Translates to: KSFGHESRNHSSRERFPDWHSHF*LHHRMA
Trigger: AGCCATTCTATGATGCAGGCAGAAGTGGCTGTGCCA...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CCA 90 bp GCTGCTCTCGAACTCCTGTGTTCAAACAAATCCACCCACCTTGGATTCCCAAAGAATCTCAGATGCTTCTaGCAACTATGTGTTATTAGT +
Preference number: 2 (lower is better)
Translates to: AALELLCSNKSTHLGFPKNLRCF*QLCVIS
Trigger: ACTAATAACACATAGTTGCCAGAAGCATCTGAGATT...CTTTGGGAATCCAAGGTGGGTGGATTTGTTTGAACACAGGAGTTCGAGAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CCA 90 bp GCTGCTCTCGAACTCCTGTGTTCAAACAAATCCACCCACCTTGGATTCCCAAAGATATATACTACACATTaGTGCGTAAGAGTGGAAAGT +
Preference number: 2 (lower is better)
Translates to: AALELLCSNKSTHLGFPKIYTTH*CVRVES
Trigger: ACTTTCCACTCTTACGCACCAATGTGTAGTATATAT...CTTTGGGAATCCAAGGTGGGTGGATTTGTTTGAACACAGGAGTTCGAGAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGATATATACTACACATTaGTGCGTAAGAGTGGAAAGT +
Preference number: 2 (lower is better)
Translates to: FYSRGTREPSHILLRTLLIYTTH*CVRVES
Trigger: ACTTTCCACTCTTACGCACCAATGTGTAGTATATAT...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CAA 90 bp AGACAGGGGAAGCTAGCAATTTCAGTTCTCAGCATTGAAAAAGTTTaGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTG +
Preference number: 2 (lower is better)
Translates to: RQGKLAISVLSIEKV*AMKVEITAQGRDFL
Trigger: CAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTTTCAATGCTGAGAACTGAAATTGCTAGCTTCCCCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATCTACTTTGTCCTGTGTaGGAAGGAACTTGTGCAAGC +
Preference number: 2 (lower is better)
Translates to: KSFGHESRNHSSRERFPDLLCPV*EGTCAS
Trigger: GCTTGCACAAGTTCCTTCTCACACAGGACAAAGTAG...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR TCA 90 bp CTTTATATACAATTTGTTATCATATCAGACATACCTATGGCTTCCACCCAGAGTCAAAGCTTTAACTTCTaGGCACAGAGAGGCACGCAC +
Preference number: 2 (lower is better)
Translates to: LYIQFVIISDIPMASTQSQSFNF*AQRGTH
Trigger: GTGCGTGCCTCTCTGTGCTCAGAAGTTAAAGCTTTG...ACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATTGAGTACTAAACAATaGAATCTCAGATGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKLSTKQ*NLRCFW
Trigger: CCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATATACTACACATTGGTaGGTAAGAGTGGAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKYTTHW*VRVESK
Trigger: TTTACTTTCCACTCTTACGCACCAATGTGTAGTATA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCTTTACTGTGTGGTTTTaGATACTCTCCTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFFTVWF*ILSCVC
Trigger: GCACACACAGGAGAGTATCCAAAACCACACAGTAAA...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTACATTTTCAAAGGCCATaGGCTGGTAAAATGTTAACT +
Preference number: 2 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLHFQRP*AGKMLT
Trigger: AGTTAACATTTTACCAGCCCATGGCCTTTGAAAATG...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR CAA 90 bp TTGATTGCATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATaGGAGGGCTCTCCCTATGGGTTGAGATTGAGACATGTTATAAAT +
Preference number: 2 (lower is better)
Translates to: LIAFYCFLQLNVYLI*EGSPYGLRLRHVIN
Trigger: ATTTATAACATGTCTCAATCTCAACCCATAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAATGCAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR GCA 90 bp TTTGACGTCATTAGATCAATATCTGCATTTCCCCCTCTCTGTTACTCTATAGTTCAATGGAATCTCAGATaGTTCTGGCAACTATGTGTT +
Preference number: 2 (lower is better)
Translates to: FDVIRSISAFPPLCYSIVQWNLR*FWQLCV
Trigger: AACACATAGTTGCCAGAAGCATCTGAGATTCCATTG...AACTATAGAGTAACAGAGAGGGGGAAATGCAGATATTGATCTAATGACGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR TCA 72 bp TCAGAGCAGGTGAAGCCGCAGGTCTCTGAGCGATCCTaGAAGCCCTGCTCCTTCAGCACAGGTGCCCCGGGT +
Preference number: 3 (lower is better)
Translates to: SEQVKPQVSERS*KPCSFSTGAPG
Trigger: ACCCGGGGCACCTGTGCTGAAGGAGCAGGGCTTTCAGGATCGCTCAGAGACCTGCGGCTTCACCTGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR GCA 72 bp GGAGGCACAAAGACGTGGGGCGTGGGGGAGGTGACATaGTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: GGTKTWGVGEVT*CCFEELYDPPK
Trigger: CTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp GCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTaGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: AMVGSRVGGTKT*GVGEVTCCCFE
Trigger: CTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGCTGGGGAGAATCACGTaGGGTTTGCCACAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPLGRIT*GLPQVA
Trigger: GGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAG...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 72 bp CAGAGCCCAGTGTCCACACCGTGGCACAGCCACTTCTaGCTGCATCATAGAATGGCTGGGGCAGCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: QSPVSTPWHSHF*LHHRMAGAAAV
Trigger: AACAGCAGCTGCCCCAGCCATTCTATGATGCAGGCAGAAGTGGCTGTGCCACGGTGTGGACACTGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR GCA 72 bp GGCACAAAGACGTGGGGCGTGGGGGAGGTGACATGCTaGTGCTTTGAGGAGCTCTATGACCCTCCCAAGACA +
Preference number: 3 (lower is better)
Translates to: GTKTWGVGEVTC*CFEELYDPPKT
Trigger: TGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGACTGGGGAGAATCACGTaGGGTTTGCCACAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRLGRIT*GLPQVA
Trigger: GGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAG...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTGGTAGGAGTTGCTGCTaGAGTTGGGCAGCATTTACC +
Preference number: 3 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPGRSCC*SWAAFT
Trigger: GGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACC...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 72 bp CCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGTTTaGGGCTGCCTGGGGCGATGGTTAGGACTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: PVVFEVLGCRRV*GCLGRWLGLLS
Trigger: TGAGAGCAGTCCTAACCATCGCCCCAGGCAGCCTCAAACCCTCCTGCACCCCAGAACTTCAAAGACCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR GCA 72 bp CACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTaGCGAGGCCAGAAACGGCAGCTTACCCCATTAACC +
Preference number: 3 (lower is better)
Translates to: HKTRPGRSPWSC*RGQKRQLTPLT
Trigger: GGTTAATGGGGTAAGCTGCCGTTTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 72 bp ACAAAGACGTGGGGCGTGGGGGAGGTGACATGCTGCTaGTTTGAGGAGCTCTATGACCCTCCCAAGACACAC +
Preference number: 3 (lower is better)
Translates to: TKTWGVGEVTCC*FEELYDPPKTH
Trigger: GTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp GTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATaGTCATGCTGCCGAGGCCAGAAACGGCAGCTTACC +
Preference number: 3 (lower is better)
Translates to: VSYHKTRPGRSP*SCCRGQKRQLT
Trigger: GGTAAGCTGCCGTTTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp AGAGGTTCAGGCCGTGTCATACCACAAAACCAGGCCTaGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: RGSGRVIPQNQA*KEPMVMLPRPE
Trigger: TTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCCTGAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 72 bp TACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATaGTGCCGAGGCCAGAAACGGCAGCTTACCCCATTA +
Preference number: 3 (lower is better)
Translates to: YHKTRPGRSPWS*CRGQKRQLTPL
Trigger: TAATGGGGTAAGCTGCCGTTTCTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp AAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTaGGGTGCAGGAGGGTTTGAGGCTGCCTGGGGCGAT +
Preference number: 3 (lower is better)
Translates to: KQFHGPQWSLKF*GAGGFEAAWGD
Trigger: ATCGCCCCAGGCAGCCTCAAACCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CAA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGAGAATCACGTTGGGTTaGCCACAGGTTGCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWRITLG*PQVACG
Trigger: CCCACAGGCAACCTGTGGCAAACCCAACGTGATTCT...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAATGGGCTCAAAAGGAATaGTTTGAGAGGAAACCAGGA +
Preference number: 3 (lower is better)
Translates to: EQGCREPERGAHRSAGREWAQKE*FERKPG
Trigger: TCCTGGTTTCCTCTCAAACAATTCCTTTTGAGCCCA...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 72 bp GTAGAGACTCAGAGCTGGGGAGAATCACGTTGGGTTTaGCACAGGTTGCCTGTGGGACATCTAGCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: VETQSWGESRWV*HRLPVGHLAGE
Trigger: CTCTCCAGCTAGATGTCCCACAGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 72 bp ACTTGTGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTaGAGTTCTGGGGTGCAGGAGGGTTTGAGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: TCASSFMVPSGL*SSGVQEGLRLP
Trigger: AGGCAGCCTCAAACCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR GCA 72 bp ACTTCTGAGCACAGAGAGGCACGCACAGTGCCAGCCTaGCAGGCCAGAAGCTCTCATTTGAATGTTGCTGAT +
Preference number: 3 (lower is better)
Translates to: TSEHREARTVPA*QARSSHLNVAD
Trigger: ATCAGCAACATTCAAATGAGAGCTTCTGGCCTGGCAGGCTGGCACTGTGCGTGCCTCTCTGTGCTCAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR GCA 72 bp AATGGCTGGGGCAGCTGCTGTTGTGCCGACTTGAGATaGCTGTTCCATGAGGAGATCAGTAGGCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: NGWGSCCCADLR*LFHEEISRHSA
Trigger: TGCTGAATGCCTACTGATCTCCTCATGGAACAGGCATCTCAAGTCGGCACAACAGCAGCTGCCCCAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR GCA 72 bp GGGCCAGTGCATTCCCCTGGTGGAGCATGGGTTACTTaGTCATGTCAAGACTCTGTTTCCACCAAGACTCAC +
Preference number: 3 (lower is better)
Translates to: GPVHSPGGAWVT*SCQDSVSTKTH
Trigger: GTGAGTCTTGGTGGAAACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCACCAGGGGAATGCACTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGGGTCCCCAGTGGTCTTaGAAGTTCTGGGGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: FYSRGTREPSHILLRTLLGPQWS*KFWGAG
Trigger: TCCTGCACCCCAGAACTTCAAAGACCACTGGGGACC...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR TCA 72 bp TACTGTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATaGAGCCAAGGAGGGCAGGTCTTCTTCACTTGTAGT +
Preference number: 3 (lower is better)
Translates to: YCLALPALQLWS*SQGGQVFFTCS
Trigger: ACTACAAGTGAAGAAGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGACAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR CCA 72 bp GTCCTGTGTGAGAAGGAACTTGTGCAAGCAGTTTCATaGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: VLCEKELVQAVS*SPVVFEVLGCR
Trigger: CCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCACAAGTTCCTTCTCACACAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CCA 72 bp CTAGAGTTGAGGTCTAGGGCCAGTGCATTCCCCTGGTaGAGCATGGGTTACTTGCTCATGTCAAGACTCTGT +
Preference number: 3 (lower is better)
Translates to: LELRSRASAFPW*SMGYLLMSRLC
Trigger: ACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCACCAGGGGAATGCACTGGCCCTAGACCTCAACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGAGAATCACGTTGGGTTaGCCACAGGTTGCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: RDAKSQSRAKALALLRKGRITLG*PQVACG
Trigger: CCCACAGGCAACCTGTGGCAAACCCAACGTGATTCT...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAACTGGGGCAGCTGCTGTaGTGCCGACTTGAGATGCCT +
Preference number: 3 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKLGQLL*CRLEMP
Trigger: AGGCATCTCAAGTCGGCACAACAGCAGCTGCCCCAG...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CAA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTAATGTGTACCTGATATaGGAGGGCTCTCCCTATGGG +
Preference number: 3 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFNVYLI*EGSPYG
Trigger: CCCATAGGGAGAGCCCTCCAATATCAGGTACACATT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CAA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTACCATGACCTCCCATTaGACGTCATTAGATCAATAT +
Preference number: 3 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSTMTSH*TSLDQY
Trigger: ATATTGATCTAATGACGTCAAATGGGAGGTCATGGT...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CAA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGGAGTTGCTGCTTGAGTaGGGCAGCATTTACCAGGTG +
Preference number: 3 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVELLLE*GSIYQV
Trigger: CACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTC...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 72 bp GGGAGAAGGGGAAAGATTATGGTAGGAGTTGCTGCTTaGGTTGGGCAGCATTTACCAGGTGGAGAAGGGGAT +
Preference number: 3 (lower is better)
Translates to: GRRGKIMVGVAA*VGQHLPGGEGD
Trigger: ATCCCCTTCTCCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACCATAATCTTTCCCCTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 72 bp ACACACACACACACACACACACACACAGATATAGGGTaGCAGGCATTCATCAGAGCCTATGCAGAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTDIG*QAFIRAYAEQG
Trigger: GCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp CATGAGGAGATCAGTAGGCATTCAGCACGGCTATCCTaGCCTTTTCACACAGTGGGTCTAGTTTACCATCGC +
Preference number: 3 (lower is better)
Translates to: HEEISRHSARLS*PFHTVGLVYHR
Trigger: GCGATGGTAAACTAGACCCACTGTGTGAAAAGGCCAGGATAGCCGTGCTGAATGCCTACTGATCTCCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR CCA 72 bp CTTCAACACGGGAATACAGTTGTAGAGACTCAGAGCTaGGGAGAATCACGTTGGGTTTGCCACAGGTTGCCT +
Preference number: 3 (lower is better)
Translates to: LQHGNTVVETQS*GESRWVCHRLP
Trigger: AGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTACAACTGTATTCCCGTGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp AAGGGGAAAGATTATGGTAGGAGTTGCTGCTTGAGTTaGGCAGCATTTACCAGGTGGAGAAGGGGATGCCAG +
Preference number: 3 (lower is better)
Translates to: KGKDYGRSCCLS*AAFTRWRRGCQ
Trigger: CTGGCATCCCCTTCTCCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACCATAATCTTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTGCGAAAGCACTGGCATaGTTGAGAAAAGGGCAGATC +
Preference number: 3 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCAKALA*LRKGQI
Trigger: GATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGC...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp GAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACACACATGGAGCATGGGTTACTaGCTCATGTCAAGACTCTGT +
Preference number: 3 (lower is better)
Translates to: ELYDPPKTHRHTHTHTHTWSMGY*LMSRLC
Trigger: ACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCA...TGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535836.1
3UTR TCA 72 bp AGGCTGGATAAAATACAGGGACACAAGGAGAGGCTCTaGAGCCAGAGGTTCAGGCCGTGTCATACCACAAAA +
Preference number: 3 (lower is better)
Translates to: RLDKIQGHKERL*SQRFRPCHTTK
Trigger: TTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTGTGTCCCTGTATTTTATCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR GCA 72 bp GTGTTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTaGCATCCTTTGTTAACTGTGTGTTTGTTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: VLCPGLAGWSID*HPLLTVCLLRA
Trigger: AGCCCTCAACAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGCCTGTTCTGAGCACTTaGAGTACTAAACAATGGAAT +
Preference number: 3 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGPVLST*STKQWN
Trigger: ATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGG...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CAA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGTGTGTGAGAAGGAACTaGTGCAAGCAGTTTCATGGT +
Preference number: 3 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALCVRRN*CKQFHG
Trigger: ACCATGAAACTGCTTGCACAAGTTCCTTCTCACACA...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CAA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGATTATATCCCCTACTTaGTCCTGTGTGAGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: HEGARMSSTLKHRALLPLIISPT*SCVRRN
Trigger: GTTCCTTCTCACACAGGACAAAGTAGGGGATATAAT...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CAA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTCTTTACTGTGTGGTTTaGGATACTCTCCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFLYCVV*DTLLCV
Trigger: CACACACAGGAGAGTATCCAAAACCACACAGTAAAG...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CAA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCTCCTGTTTCCAATGTTaGGGGAAACTCGTAGCATCA +
Preference number: 3 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLSCFQC*GKLVAS
Trigger: TGATGCTACGAGTTTCCCCAAACATTGGAAACAGGA...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CAA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACAGCGAAAGCACTGGCATaGTTGAGAAAAGGGCAGATC +
Preference number: 3 (lower is better)
Translates to: DDFSSHVASGLQEEIMETAKALA*LRKGQI
Trigger: GATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGC...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 72 bp CCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTaGGAAAAGGGCAGATCAGTTCACTTCAGAAGATGG +
Preference number: 3 (lower is better)
Translates to: PNPKAGRKHWHC*EKGRSVHFRRW
Trigger: CCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGGACAATTTTTGTTTaGGGGGACTCAGCATCTATT +
Preference number: 3 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVGTIFV*GDSASI
Trigger: AATAGATGCTGAGTCCCCCAAAACAAAAATTGTCCC...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR-3UTR CAA 90 bp TTGAGGAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACGGGACAATTTTTGTTTaGGGGGACTCAGCATCTATT +
Preference number: 3 (lower is better)
Translates to: LRSSMTLPRHTDTHTHTHGTIFV*GDSASI
Trigger: AATAGATGCTGAGTCCCCCAAAACAAAAATTGTCCC...GTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535836.1
3UTR-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAAATGTGTACCTGATATaGGAGGGCTCTCCCTATGGG +
Preference number: 3 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKNVYLI*EGSPYG
Trigger: CCCATAGGGAGAGCCCTCCAATATCAGGTACACATT...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR-3UTR CAA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTACCATGACCTCCCATTaGACGTCATTAGATCAATAT +
Preference number: 3 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFTMTSH*TSLDQY
Trigger: ATATTGATCTAATGACGTCAAATGGGAGGTCATGGT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR TCA 72 bp CAGAAGATGGTGGGGGCTGTCCCCAAGTTCCCAAATTaGGTAAGTAGTTCATCGATCATAACTTCAACACGG +
Preference number: 3 (lower is better)
Translates to: QKMVGAVPKFPN*VSSSSIITSTR
Trigger: CCGTGTTGAAGTTATGATCGATGAACTACTTACTCAATTTGGGAACTTGGGGACAGCCCCCACCATCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp GTCAAGGTTTATAGCTGTGAGCAACAGAGCTGGTTCTaGCTGAGATGGGCTCAAAAGGAATTGTTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: VKVYSCEQQSWF*LRWAQKELFER
Trigger: CCTCTCAAACAATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CCA 72 bp GTCTCAGTCAAGGTTTATAGCTGTGAGCAACAGAGCTaGTTCTGGCTGAGATGGGCTCAAAAGGAATTGTTT +
Preference number: 3 (lower is better)
Translates to: VSVKVYSCEQQS*FWLRWAQKELF
Trigger: AAACAATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGACTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR TCA 72 bp CTCAGAGGAAACCTCGGTGATTTTTCCCAGCAATGCTaGTTCAGACATCATTTGCCTCTGATCCAAACTGAA +
Preference number: 3 (lower is better)
Translates to: LRGNLGDFSQQC*FRHHLPLIQTE
Trigger: TTCAGTTTGGATCAGAGGCAAATGATGTCTGAATCAGCATTGCTGGGAAAAATCACCGAGGTTTCCTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR-3UTR CAA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGCCTGTTCTGAGCACTTaGAGTACTAAACAATGGAAT +
Preference number: 3 (lower is better)
Translates to: IISDIPMASTQSAFSKAMPVLST*STKQWN
Trigger: ATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGG...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR-3UTR CAA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGAGAAAGAAACCCAATTaGAATCCAGGCATGATACAC +
Preference number: 3 (lower is better)
Translates to: IISDIPMASTQSAFSKAMRKKPN*NPGMIH
Trigger: GTGTATCATGCCTGGATTCAAATTGGGTTTCTTTCT...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
3UTR GCA 72 bp CTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATaGTTCTGGCAACTATGTGTTATTAGTCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: LSTLSTKQWNLR*FWQLCVISQEW
Trigger: CCATTCCTGACTAATAACACATAGTTGCCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CCA 72 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATaGAATCTCAGATGCTTCTGGCAACTATGTGTTATT +
Preference number: 3 (lower is better)
Translates to: ISPVLSTLSTKQ*NLRCFWQLCVI
Trigger: AATAACACATAGTTGCCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAACACAAGGAGAGGCTCTaGAGCCAGAGGTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREHKERL*SQRFRP
Trigger: CGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTGTG...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGACAGCTTGCAGGCCCTaGAGGCGGAAGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVTACRP*RRKVWC
Trigger: GCACCACACCTTCCGCCTGCAGGGCCTGCAAGCTGT...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGGCCCATAGCGCAGGATaGCCACTGCGTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPAHSAG*PLRSWA
Trigger: TGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGC...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGGCGCAGGATGACCACTaGGTTCTTGGGCATCGCCAG +
Preference number: 4 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVAQDDH*VLGHRQ
Trigger: CTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGC...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGATGGCCAACACAGCTTaGAGGCCCTGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVMANTA*RPCRRK
Trigger: CTTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCAT...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAATCACTTAGGGCTGTaGGGTGGGCAGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPNHLGL*GGQWAR
Trigger: CCTGGCCCACTGCCCACCCCACAGCCCTAAGTGATT...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGGGAGGCACAAAGACGTaGGGCGTGGGGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQGGTKT*GVGEVT
Trigger: TGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCC...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTTGCTCTCAGAGCAGGTaGAGCCGCAGGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSCSQSR*SRRSLS
Trigger: GCTCAGAGACCTGCGGCTTCACCTGCTCTGAGAGCA...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAAGGATGTAGCTGCCGCTaGCAGAGCCACAGAACACAT +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREGCSCR*QSHRTH
Trigger: ATGTGTTCTGTGGCTCTGGCAGCGGCAGCTACATCC...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGGTGGGGGAGGTGACATaGTGCTGCTTTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPVGEVT*CCFEEL
Trigger: GAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCAC...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGGTGGGGGAGGTGACATaGTGCTGCTTTGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVVGEVT*CCFEEL
Trigger: GAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCAC...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAACACTTCAGAAGATGGTaGGGGCTGTCCCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREHFRRW*GLSPSS
Trigger: GGAACTTGGGGACAGCCCCCACCATCTTCTGAAGTG...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAAGCCAGTGCATTCCCCTaGTGGAGCATGGGTTACTTG +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREASAFP*WSMGYL
Trigger: CAAGTAACCCATGCTCCACCAGGGGAATGCACTGGC...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCTCGAGCAACTGTTaGGTGTTGTGTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPPSSNC*VLCPGL
Trigger: CAGCCCTGGACACAACACCCAACAGTTGCTCGAGGG...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTGGGTGCAGGAGGGTTTaGGGCTGCCTGGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFGCRRV*GCLGRW
Trigger: CCATCGCCCCAGGCAGCCTCAAACCCTCCTGCACCC...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGTGCTGGAGGAGGGCATaGGGCTGCCGAGGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLCWRRA*GCRGKH
Trigger: GTGCTTCCCTCGGCAGCCCCATGCCCTCCTCCAGCA...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTTGTGTCTCTTGCTTCTaGGCAGGGAGGTGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSCVSCF*AGRCVL
Trigger: GAGCACGCACCTCCCTGCCCAGAAGCAAGAGACACA...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAATGGGGAGAATCACGTTaGGTTTGCCACAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREWGESR*VCHRLP
Trigger: AGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCA...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAACAGGATCTCAAGGACTaGCCTAGAAGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREQDLKD*PRRLEK
Trigger: CTTCTCCAGCCTTCTAGGCCAGTCCTTGAGATCCTG...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGCAGGGAACAGGTGAGTaGGGCTCAGATCGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQQGTGE*GSDRKG
Trigger: CCCTTTACGATCTGAGCCTCACTCACCTGTTCCCTG...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAAGTAGGAGTTGCTGCTTaGGTTGGGCAGCATTTACCA +
Preference number: 4 (lower is better)
Translates to: EQGCREPERGAHRSAGREVGVAA*VGQHLP
Trigger: TGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTAC...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGAGGCGGAAGGTGTGGTaGTCCACCGGTAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRRRKVW*STGRPA
Trigger: GGCAGGCCTACCGGTGGAGCACCACACCTTCCGCCT...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTATGGCCAACACAGCTTaGAGGCCCTGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SKNATLALEQLLGVVSRAMANTA*RPCRRK
Trigger: CTTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCAT...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAATGTCAGCCTGGAGCTaGTGGTGGTCCTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRMSAWS*WWSSCH
Trigger: GTGACAAGAGGACCACCAGCAGCTCCAGGCTGACAT...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGATGCAGGCGGAAGGTGTaGTGCTCCACCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRCRRKV*CSTGRP
Trigger: AGGCCTACCGGTGGAGCACCACACCTTCCGCCTGCA...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTTGTGGGACATCTAGCTaGAGAGGTTCGGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPCGTSS*RGSGDV
Trigger: CACATCTCCCGAACCTCTCCAGCTAGATGTCCCACA...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGCAGCATTTACCAGGTaGAGAAGGGGATGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRAAFTR*RRGCQE
Trigger: CTCCTGGCATCCCCTTCTCCACCTGGTAAATGCTGC...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGCCAGGGCTGGCAGGATaGAGCATTGATTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQPGLAG*SIDCHP
Trigger: AGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGACCCTCGAGCAACTGTTaGGTGTTGTGTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRPSSNC*VLCPGL
Trigger: CAGCCCTGGACACAACACCCAACAGTTGCTCGAGGG...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp CAGAGCTGGGGAGAATCACGTTGGGTTTGCCACAGGTaGCCTGTGGGACATCTAGCTGGAGAGGTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: QSWGESRWVCHR*PVGHLAGEVRE
Trigger: CTCCCGAACCTCTCCAGCTAGATGTCCCACAGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGCGAGTTGCCCTGTTCTaGCTAGCAGAGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGRVALF*LAEPSV
Trigger: GACACTGGGCTCTGCTAGTCAGAACAGGGCAACTCG...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGTCTCTAGTCCAGAAATaGGCATGTGATCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPSLVQK*ACDPGL
Trigger: CAGGCCTGGATCACATGCTCATTTCTGGACTAGAGA...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGGCGCAGGATGACCACTaGGTTCTTGGGCATCGCCAG +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLAQDDH*VLGHRQ
Trigger: CTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGC...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGACAGCTTGCAGGCCCTaGAGGCGGAAGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLTACRP*RRKVWC
Trigger: GCACCACACCTTCCGCCTGCAGGGCCTGCAAGCTGT...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAACAGCTTGCAGGCCCTaGAGGCGGAAGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVTACRP*RRKVWC
Trigger: GCACCACACCTTCCGCCTGCAGGGCCTGCAAGCTGT...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTACAGCTTGCAGGCCCTaGAGGCGGAAGGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFTACRP*RRKVWC
Trigger: GCACCACACCTTCCGCCTGCAGGGCCTGCAAGCTGT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCGGGCAGGGAGGTGCGTaGTCGAGAGAGGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLGQGGA*SREGGK
Trigger: TTTGCCTCCCTCTCTCGAGCACGCACCTCCCTGCCC...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGGCAAGCTGTGTCTCTTaGTTCTGGGCAGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGASCVS*FWAGRC
Trigger: GCACCTCCCTGCCCAGAAGCAAGAGACACAGCTTGC...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGGAATCACGTTGGGTTTaGCACAGGTTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQESRWV*HRLPVG
Trigger: TCCCACAGGCAACCTGTGGCAAACCCAACGTGATTC...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGAGGGAGCCCACCGTTCTaGTGGGAGAGAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRGSPPF*WERREK
Trigger: CTTCTCCCTTCTCTCCCAGCAGAACGGTGGGCTCCC...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTGAGGTGACATGCTGCTaGTTTGAGGAGCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPEVTCC*FEELYD
Trigger: GTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTATGCAGGCGGAAGGTGTaGTGCTCCACCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVCRRKV*CSTGRP
Trigger: AGGCCTACCGGTGGAGCACCACACCTTCCGCCTGCA...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGAGCCTGGAGCTGCTGGTaGTCCTCTTGTCACTACTTG +
Preference number: 4 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRAWSCW*SSCHYL
Trigger: CAAGTAGTGACAAGAGGACCACCAGCAGCTCCAGGC...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGCAGCCATGTGGCGAGTaGTTTGCAGGAGGAGATAAT +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPQPCGE*FAGGDN
Trigger: ATTATCTCCTCCTGCAAACCACTCGCCACATGGCTG...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGATGTGAGCAACAGAGCTaGTTCTGGCTGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRCEQQS*FWLRWA
Trigger: AGCCCATCTCAGCCAGAACCAGCTCTGTTGCTCACA...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp AGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTaGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGC +
Preference number: 4 (lower is better)
Translates to: RMPHWPSSNCWV*CPGLAGWSIDC
Trigger: GCAATCAATGCTCCATCCTGCCAGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCGCCCATAGCGCAGGATaGCCACTGCGTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLAHSAG*PLRSWA
Trigger: TGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGC...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGCGAGTTGCCCTGTTCTaGCTAGCAGAGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLRVALF*LAEPSV
Trigger: GACACTGGGCTCTGCTAGTCAGAACAGGGCAACTCG...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCGAAGCCGCAGGTCTCTaGGCGATCCTGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLEAAGL*AILKAL
Trigger: CAGGGCTTTCAGGATCGCTCAGAGACCTGCGGCTTC...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTCAGAGGAAACCTCGGTaGTTTTTCCCAGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSQRKPR*FFPAML
Trigger: CAGCATTGCTGGGAAAAATCACCGAGGTTTCCTCTG...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTATGGCCAACACAGCTTaGAGGCCCTGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFMANTA*RPCRRK
Trigger: CTTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCAT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGACCTCTTGTCACTACTTaGGGTGAGCTTGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRPLVTT*GELAEL
Trigger: GAGTTCGGCAAGCTCACCCCAAGTAGTGACAAGAGG...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGGCAGCATTTACCAGGTaGAGAAGGGGATGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRAAFTR*RRGCQE
Trigger: CTCCTGGCATCCCCTTCTCCACCTGGTAAATGCTGC...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGGCCCATAGCGCAGGATaGCCACTGCGTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLAHSAG*PLRSWA
Trigger: TGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGC...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAGGGTGCAGGAGGGTTTaGGGCTGCCTGGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKGCRRV*GCLGRW
Trigger: CCATCGCCCCAGGCAGCCTCAAACCCTCCTGCACCC...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGCTTCAGCTCTGGTCATaGAGCCAAGGAGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALLQLWS*SQGGQV
Trigger: GACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAG...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp CCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTTGCACAAGGAGAGGCTCTaGAGCCAGAGGTTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PGLAGWSIDCHPLLTVCLHKERL*SQRFRP
Trigger: CGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTGTG...CAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGACAGGGAACAGGTGAGTaGGGCTCAGATCGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGQGTGE*GSDRKG
Trigger: CCCTTTACGATCTGAGCCTCACTCACCTGTTCCCTG...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGGCGCAGGATGACCACTaGGTTCTTGGGCATCGCCAG +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLAQDDH*VLGHRQ
Trigger: CTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGC...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGGCGCAGGATGACCACTaGGTTCTTGGGCATCGCCAG +
Preference number: 4 (lower is better)
Translates to: RDAKSQSRAKALALLRKGAQDDH*VLGHRQ
Trigger: CTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGC...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGACACACAGATATAGGGTaGCAGGCATTCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRHTDIG*QAFIRA
Trigger: GGCTCTGATGAATGCCTGGCACCCTATATCTGTGTG...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGGGGGAGGTGACATGCTaGTGCTTTGAGGAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRGEVTC*CFEELY
Trigger: ATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCC...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGAGGCAAATTGCTGGCTaGAAGCATCGCCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGRQIAG*KHRQRA
Trigger: AGCCCTTTGGCGATGCTTCCAGCCAGCAATTTGCCT...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGCCTCTTGTCACTACTTaGGGTGAGCTTGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWPLVTT*GELAEL
Trigger: GAGTTCGGCAAGCTCACCCCAAGTAGTGACAAGAGG...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGATCAGCCTGGAGCTGCTaGTGGTCCTCTTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: EVTCCCFEELYDPPKTHRSAWSC*WSSCHY
Trigger: GTAGTGACAAGAGGACCACCAGCAGCTCCAGGCTGA...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGGTCCTGGGTCTTTTGTaGGAACTGTTGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQVLGLL*ELLQRR
Trigger: TCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGAC...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGTTCACTTCAGAAGATaGTGGGGGCTGTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWVHFRR*WGLSPS
Trigger: ACTTGGGGACAGCCCCCACCATCTTCTGAAGTGAAC...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGACAGCCATGTGGCGAGTaGTTTGCAGGAGGAGATAAT +
Preference number: 4 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRQPCGE*FAGGDN
Trigger: ATTATCTCCTCCTGCAAACCACTCGCCACATGGCTG...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTAATCACTTAGGGCTGTaGGGTGGGCAGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCNHLGL*GGQWAR
Trigger: CCTGGCCCACTGCCCACCCCACAGCCCTAAGTGATT...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGAAGTTGCTGCTTGAGTTaGGCAGCATTTACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRSCCLS*AAFTRW
Trigger: CCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACT...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGTTGAGGGCTCACTATaGGACAAGTGCTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWVEGSL*DKCYGG
Trigger: CCCACCATAGCACTTGTCCCATAGTGAGCCCTCAAC...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTGTAAGAATGCCACACTaGCCCTCGAGCAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: SKNATLALEQLLGVVSRAVRMPH*PSSNCW
Trigger: CCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTAC...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp TGTAGAGACTCAGAGCTGGGGAGAATCACGTTGGGTTaGCCACAGGTTGCCTGTGGGACATCTAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CRDSELGRITLG*PQVACGTSSWR
Trigger: TCTCCAGCTAGATGTCCCACAGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp TGCCGAGGCCAGAAACGGCAGCTTACCCCATTAACCTaGCTAGATGCTGGATGTCGTAGCTGGCATGATTGC +
Preference number: 4 (lower is better)
Translates to: CRGQKRQLTPLT*LDAGCRSWHDC
Trigger: GCAATCATGCCAGCTACGACATCCAGCATCTAGCAAGGTTAATGGGGTAAGCTGCCGTTTCTGGCCTCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGGCTGTTGTGCCGACTTaGGATGCCTGTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALAVVPT*DACSMR
Trigger: CCTCATGGAACAGGCATCTCAAGTCGGCACAACAGC...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGGTCCCCAGTGGTCTTTaGAGTTCTGGGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLVPSGL*SSGVQE
Trigger: CTCCTGCACCCCAGAACTTCAAAGACCACTGGGGAC...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTAGAGCTGGTTCTGGCTaGGATGGGCTCAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SKNATLALEQLLGVVSRARAGSG*DGLKRN
Trigger: ATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCT...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGTGGCACAGCCACTTCTaGCTGCATCATAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGWHSHF*LHHRMA
Trigger: AGCCATTCTATGATGCAGGCAGAAGTGGCTGTGCCA...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTTTCTGTGGGCTCCTGTaGAGCCAGGTGACAATCCTG +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFFCGLL*SQVTIL
Trigger: CAGGATTGTCACCTGGCTGCACAGGAGCCCACAGAA...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGAGGAGGGCATGGGGCTaGCGAGGGAAGCACTTGTTA +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLRRAWG*RGKHLL
Trigger: TAACAAGTGCTTCCCTCGGCAGCCCCATGCCCTCCT...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGGGCACAAATACAACCTaGGGGGTTGAGGCGGATGCT +
Preference number: 4 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLGTNTT*GVEADA
Trigger: AGCATCCGCCTCAACCCCGCAGGTTGTATTTGTGCC...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAATGTCAGCCTGGAGCTaGTGGTGGTCCTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVMSAWS*WWSSCH
Trigger: GTGACAAGAGGACCACCAGCAGCTCCAGGCTGACAT...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGATGTAGCTGCCGCTaGCAGAGCCACAGAACACAT +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVGCSCR*QSHRTH
Trigger: ATGTGTTCTGTGGCTCTGGCAGCGGCAGCTACATCC...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACAGGGAGCCCACCGTTCTaGTGGGAGAGAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DDFSSHVASGLQEEIMETGSPPF*WERREK
Trigger: CTTCTCCCTTCTCTCCCAGCAGAACGGTGGGCTCCC...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTGGATGGAGCATTGATTaGCATCCTTTGTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPGWSID*HPLLTV
Trigger: CACAGTTAACAAAGGATGGCAATCAATGCTCCATCC...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TTGAGGAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACCACTTCAGAAGATGGTaGGGGCTGTCCCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LRSSMTLPRHTDTHTHTHHFRRW*GLSPSS
Trigger: GGAACTTGGGGACAGCCCCCACCATCTTCTGAAGTG...GTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535836.1
CDS-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGATTTTAGCAGCCATGTaGCGAGTGGTTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWILAAM*RVVCRR
Trigger: CCTCCTGCAAACCACTCGCCACATGGCTGCTAAAAT...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGTCCCCTGGTGGAGCATaGGTTACTTGCTCATGTCAA +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRSPGGA*VTCSCQ
Trigger: TTGACATGAGCAAGTAACCCATGCTCCACCAGGGGA...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGACTGGCCTAGAAGGCTaGAGAAGCAGGCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRTGLEG*RSRLDK
Trigger: TTTATCCAGCCTGCTTCTCCAGCCTTCTAGGCCAGT...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGACAGGATCTCAAGGACTaGCCTAGAAGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGQDLKD*PRRLEK
Trigger: CTTCTCCAGCCTTCTAGGCCAGTCCTTGAGATCCTG...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGCAACAGAGCTGGTTCTaGCTGAGATGGGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWQQSWF*LRWAQK
Trigger: CTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTG...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp ATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTaGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MSSTLKHRALLP*MGSKLCLLLLG
Trigger: GCCCAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
3UTR CAA 72 bp GCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTaGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ARMSSTLKHRAL*PLMGSKLCLLL
Trigger: AAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGGCCTCTGATCCAAACTaGAACATAGGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRASDPN*NIGLWA
Trigger: TGCCCAGAGCCCTATGTTTCAGTTTGGATCAGAGGC...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGTTGGAAATGGATACATaGTCCAATCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQLEMDT*SNLGQY
Trigger: GTATTGGCCCAGATTGGATCATGTATCCATTTCCAA...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAGTAGGAGTTGCTGCTTaGGTTGGGCAGCATTTACCA +
Preference number: 4 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGVGVAA*VGQHLP
Trigger: TGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTAC...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGGGGCAGCTGCTGTTGTaGCGACTTGAGATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLGQLLL*RLEMPV
Trigger: AACAGGCATCTCAAGTCGGCACAACAGCAGCTGCCC...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTACAGCCACTTCTGCCTaGATCATAGAATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFTATSA*IIEWLG
Trigger: CCCCAGCCATTCTATGATGCAGGCAGAAGTGGCTGT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGAGTTCCCACTCCAAATaGAGACAGGGGAAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLSSHSK*RQGKLA
Trigger: TGCTAGCTTCCCCTGTCTGCATTTGGAGTGGGAACT...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTGTAAAGGGTCTCTTATaGCTGGCTGAAGAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPVKGLL*LAEEFK
Trigger: TTTAAACTCTTCAGCCAGGCATAAGAGACCCTTTAC...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCCCAAGACACACAGAGAGGTGACATGCTGCTaGTTTGAGGAGCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: EVTCCCFEELYDPPKTHREVTCC*FEELYD
Trigger: GTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC...TCTGTGTGTCTTGGGAGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATGCAGGCGGAAGGTGTaGTGCTCCACCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKCRRKV*CSTGRP
Trigger: AGGCCTACCGGTGGAGCACCACACCTTCCGCCTGCA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGTCAGCACGGCTATCCTaGCCTTTTCACACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRSARLS*PFHTVG
Trigger: ACCCACTGTGTGAAAAGGCCAGGATAGCCGTGCTGA...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGCCCTCTTTAACTCTATaGGGCTGTGTTCTACTCCAG +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGPSLTL*GCVLLQ
Trigger: CTGGAGTAGAACACAGCCCCATAGAGTTAAAGAGGG...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGGGTGAAATGTCAGCCTaGAGCTGCTGGTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RDAKSQSRAKALALLRKGGEMSA*SCWWSS
Trigger: AGAGGACCACCAGCAGCTCCAGGCTGACATTTCACC...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGGTACAAGTCAGGTCCTaGGTCTTTTGTGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRVQVRS*VFCGNC
Trigger: ACAGTTCCCACAAAAGACCCAGGACCTGACTTGTAC...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp ACAGGAGTGTCTCAGTCAAGGTTTATAGCTGTGAGCAACAGAGCTGGTTCTGGCCATGTGATCCAGGCCTaGCCAACCCAGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: TGVSQSRFIAVSNRAGSGHVIQA*PTQVTK
Trigger: CTTTGTGACCTGGGTTGGCCAGGCCTGGATCACATG...GCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGACTGAGACACTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGGCTGGAGAAGCAGGCTaGATAAAATACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRAGEAG*IKYRDT
Trigger: TGTGTCCCTGTATTTTATCCAGCCTGCTTCTCCAGC...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGCTGGAGAAGCAGGCTaGATAAAATACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWAGEAG*IKYRDT
Trigger: TGTGTCCCTGTATTTTATCCAGCCTGCTTCTCCAGC...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTGGAGGCACAAAGACGTaGGGCGTGGGGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGGGTKT*GVGEVT
Trigger: TGTCACCTCCCCCACGCCCCACGTCTTTGTGCCTCC...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGTTGAGGGCTCACTATaGGACAAGTGCTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVVEGSL*DKCYGG
Trigger: CCCACCATAGCACTTGTCCCATAGTGAGCCCTCAAC...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTGCCCATAGCGCAGGATaGCCACTGCGTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGAHSAG*PLRSWA
Trigger: TGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGC...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGATTTCAACTAGAAATTaGGGGACTCCTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGISTRN*GTPQRR
Trigger: CCTCCTCTGAGGAGTCCCTCAATTTCTAGTTGAAAT...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR TCA 90 bp GCTGCTCTCGAACTCCTGTGTTCAAACAAATCCACCCACCTTGGATTCCCAAAGCATCTCACATTCTGCTaGGGACTCTTTTGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: AALELLCSNKSTHLGFPKHLTFC*GLFCAL
Trigger: GAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATG...CTTTGGGAATCCAAGGTGGGTGGATTTGTTTGAACACAGGAGTTCGAGAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGCATCTCACATTCTGCTaGGGACTCTTTTGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLHLTFC*GLFCAL
Trigger: GAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATG...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGTCTCTGAGCGATCCTaGAAGCCCTGCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TISHSAEDSFAPSSDDINVSERS*KPCSFS
Trigger: GCTGAAGGAGCAGGGCTTTCAGGATCGCTCAGAGAC...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGTCCCTGAATCAACTCTaGCAAGTGAAGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLSLNQL*QVKLGL
Trigger: CAGCCCAAGCTTCACTTGTCAGAGTTGATTCAGGGA...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGGAATGTCTAGCACGTTaGAGCACAGGGCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRECLAR*STGHFC
Trigger: GCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTC...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGAAGCACTGGCATTGTTaGGAAAAGGGCAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWKHWHC*EKGRSV
Trigger: AACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTT...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCTGTGCCGACTTGAGATaGCTGTTCCATGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLCADLR*LFHEEI
Trigger: GATCTCCTCATGGAACAGGCATCTCAAGTCGGCACA...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TTCACTTGTAGTGCTACTCTGAAGGCACAAATACAACCTGCGGGGTTGAGGCGGTGGCACAGCCACTTCTaGCTGCATCATAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: FTCSATLKAQIQPAGLRRWHSHF*LHHRMA
Trigger: AGCCATTCTATGATGCAGGCAGAAGTGGCTGTGCCA...CCGCCTCAACCCCGCAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGCTTGGATTCCCAAAGTaGTGGGATTACAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGLGFPK*WDYRQK
Trigger: CTTTTGCCTGTAATCCCAGCACTTTGGGAATCCAAG...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGTTTTGTGGGAACTGTTaGAAAGGAGAAACTTTCATC +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPFCGNC*KGETFI
Trigger: GATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAA...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp ACAGGAGTGTCTCAGTCAAGGTTTATAGCTGTGAGCAACAGAGCTGGTTCTGGCCCTCATGTCCATCTATaGCCAACACAGCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGVSQSRFIAVSNRAGSGPHVHL*PTQLAG
Trigger: GCCTGCAAGCTGTGTTGGCCATAGATGGACATGAGG...GCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGACTGAGACACTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TTGGGGAAACTCGTAGCATCACACACTTTACTGTGTGGTTTTGGATACTCTCCTCCAGTGTCCACACCGTaGCACAGCCACTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGKLVASHTLLCGFGYSPPVSTP*HSHFCL
Trigger: CAGGCAGAAGTGGCTGTGCCACGGTGTGGACACTGG...AGGAGAGTATCCAAAACCACACAGTAAAGTGTGTGATGCTACGAGTTTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAGGCTGCCTGGGGCGATaGTTAGGACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKGCLGR*LGLLSE
Trigger: CTCTGAGAGCAGTCCTAACCATCGCCCCAGGCAGCC...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGGGCTGCCTGGGGCGATaGTTAGGACTGCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IISDIPMASTQSAFSKAMGCLGR*LGLLSE
Trigger: CTCTGAGAGCAGTCCTAACCATCGCCCCAGGCAGCC...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGTGGTCTTTGAAGTTCTaGGGTGCAGGAGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLWSLKF*GAGGFE
Trigger: CTCAAACCCTCCTGCACCCCAGAACTTCAAAGACCA...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGGTGCAAGCAGTTTCATaGTCCCCAGTGGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLVQAVS*SPVVFE
Trigger: TTCAAAGACCACTGGGGACCATGAAACTGCTTGCAC...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp ACTTCAACACGGGAATACAGTTGTAGAGACTCAGAGCTGGGGAGAATCACGTTGGCCTGGAGCTGCTGGTaGTCCTCTTGTCACTACTTG +
Preference number: 4 (lower is better)
Translates to: TSTREYSCRDSELGRITLAWSCW*SSCHYL
Trigger: CAAGTAGTGACAAGAGGACCACCAGCAGCTCCAGGC...CAACGTGATTCTCCCCAGCTCTGAGTCTCTACAACTGTATTCCCGTGTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GGCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGATTGGTTTGGAAATaGATACATGATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GRVIPQNQAWKEPMVMLPRLVWK*IHDPIW
Trigger: CCAGATTGGATCATGTATCCATTTCCAAACCAATCT...CGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACACATGTGATCCAGGCCTaGCCAACCCAGGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: DDFSSHVASGLQEEIMETHVIQA*PTQVTK
Trigger: CTTTGTGACCTGGGTTGGCCAGGCCTGGATCACATG...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTATCCCCTGGTGGAGCATaGGTTACTTGCTCATGTCAA +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVSPGGA*VTCSCQ
Trigger: TTGACATGAGCAAGTAACCCATGCTCCACCAGGGGA...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATCCAGGGCTGGCAGGATaGAGCATTGATTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNPGLAG*SIDCHP
Trigger: AGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACACACATGTTGTGTCCAGGGCTaGCAGGATGGAGCATTGATT +
Preference number: 4 (lower is better)
Translates to: ELYDPPKTHRHTHTHTHTCCVQG*QDGALI
Trigger: AATCAATGCTCCATCCTGCCAGCCCTGGACACAACA...TGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535836.1
CDS-3UTR CCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGGTAAGAATGCCACACTaGCCCTCGAGCAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVVRMPH*PSSNCW
Trigger: CCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTAC...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp AGGGAGAAGGGGAAAGATTATGGTAGGAGTTGCTGCTaGAGTTGGGCAGCATTTACCAGGTGGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: REKGKDYGRSCC*SWAAFTRWRRG
Trigger: TCCCCTTCTCCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACCATAATCTTTCCCCTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGCTATCTTCTCTAGGATaGCCTCATGTCCATCTATGG +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLLSSLG*PHVHLW
Trigger: CCATAGATGGACATGAGGTCATCCTAGAGAAGATAG...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGCTTCTTCATTCACCATaGGTTCCACCACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: HEGARMSSTLKHRALLPLLLHSP*VPPHSS
Trigger: ACTGGAATGTGGTGGAACTCATGGTGAATGAAGAAG...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAGTCCCCAGTGGTCTTTaGAGTTCTGGGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKVPSGL*SSGVQE
Trigger: CTCCTGCACCCCAGAACTTCAAAGACCACTGGGGAC...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGCTACTTTGTCCTGTGTaGGAAGGAACTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALLLCPV*EGTCAS
Trigger: GCTTGCACAAGTTCCTTCTCACACAGGACAAAGTAG...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGTCCCTGAATCAACTCTaGCAAGTGAAGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLSLNQL*QVKLGL
Trigger: CAGCCCAAGCTTCACTTGTCAGAGTTGATTCAGGGA...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTCTCTAGTCCAGAAATaGGCATGTGATCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCSLVQK*ACDPGL
Trigger: CAGGCCTGGATCACATGCTCATTTCTGGACTAGAGA...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGCCCAAGTTCCCAAATTaGGTAAGTAGTTCATCGATC +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWPKFPN*VSSSSI
Trigger: GATCGATGAACTACTTACTCAATTTGGGAACTTGGG...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTCCCAAGTTCCCAAATTaGGTAAGTAGTTCATCGATC +
Preference number: 4 (lower is better)
Translates to: SKNATLALEQLLGVVSRAPKFPN*VSSSSI
Trigger: GATCGATGAACTACTTACTCAATTTGGGAACTTGGG...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp CCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTTGAGAGCTGGTTCTGGCTaGGATGGGCTCAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PGLAGWSIDCHPLLTVCLRAGSG*DGLKRN
Trigger: ATTCCTTTTGAGCCCATCTCAGCCAGAACCAGCTCT...CAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATAATGGCTGGGGCAGCTaGTGTTGTGCCGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: TISHSAEDSFAPSSDDINNGWGS*CCADLR
Trigger: TCTCAAGTCGGCACAACAGCAGCTGCCCCAGCCATT...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGTTTTGTGGGAACTGTTaGAAAGGAGAAACTTTCATC +
Preference number: 4 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQFCGNC*KGETFI
Trigger: GATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAA...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGATATGGTAGGAGTTGCTaGTTGAGTTGGGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGYGRSC*LSWAAF
Trigger: AAATGCTGCCCAACTCAAGCAGCAACTCCTACCATA...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGATTATGGTAGGAGTTaGTGCTTGAGTTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVDYGRS*CLSWAA
Trigger: TGCTGCCCAACTCAAGCAGCAACTCCTACCATAATC...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACAGGGGAGGTGACATGCTaGTGCTTTGAGGAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: DDFSSHVASGLQEEIMETGEVTC*CFEELY
Trigger: ATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCC...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTGGATGGAGCATTGATTaGCATCCTTTGTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: SKNATLALEQLLGVVSRAGWSID*HPLLTV
Trigger: CACAGTTAACAAAGGATGGCAATCAATGCTCCATCC...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGCCCTCTTTAACTCTATaGGGCTGTGTTCTACTCCAG +
Preference number: 4 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLPSLTL*GCVLLQ
Trigger: CTGGAGTAGAACACAGCCCCATAGAGTTAAAGAGGG...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTGTGCAAGCAGTTTCATaGTCCCCAGTGGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFVQAVS*SPVVFE
Trigger: TTCAAAGACCACTGGGGACCATGAAACTGCTTGCAC...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATTGGGGAGAATCACGTTaGGTTTGCCACAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNWGESR*VCHRLP
Trigger: AGGCAACCTGTGGCAAACCCAACGTGATTCTCCCCA...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTGTAGAGACTCAGAGCTaGGGAGAATCACGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCVETQS*GESRWV
Trigger: AACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGCAACAGAGCTGGTTCTaGCTGAGATGGGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RDAKSQSRAKALALLRKGQQSWF*LRWAQK
Trigger: CTTTTGAGCCCATCTCAGCCAGAACCAGCTCTGTTG...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTGTGTCCAGGGCTaGCAGGATGGAGCATTGATT +
Preference number: 4 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVCCVQG*QDGALI
Trigger: AATCAATGCTCCATCCTGCCAGCCCTGGACACAACA...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTAGAAGCCGCAGGTCTCTaGGCGATCCTGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLEAAGL*AILKAL
Trigger: CAGGGCTTTCAGGATCGCTCAGAGACCTGCGGCTTC...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGTTTCCTTTTGTGAAATaGACCCCTTTCCCACAATCT +
Preference number: 4 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWFPFVK*TPFPQS
Trigger: AGATTGTGGGAAAGGGGTTCATTTCACAAAAGGAAA...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGGGCAGGATGGAGCATTaGTTGCCATCCTTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: RDAKSQSRAKALALLRKGGRMEH*LPSFVN
Trigger: GTTAACAAAGGATGGCAATCAATGCTCCATCCTGCC...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTAATGGCCAACACAGCTTaGAGGCCCTGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLMANTA*RPCRRK
Trigger: CTTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCAT...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TTGGGGAAACTCGTAGCATCACACACTTTACTGTGTGGTTTTGGATACTCTCCTTTCTGTGGGCTCCTGTaGAGCCAGGTGACAATCCTG +
Preference number: 4 (lower is better)
Translates to: LGKLVASHTLLCGFGYSPFCGLL*SQVTIL
Trigger: CAGGATTGTCACCTGGCTGCACAGGAGCCCACAGAA...AGGAGAGTATCCAAAACCACACAGTAAAGTGTGTGATGCTACGAGTTTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATCCTCATGTCCATCTATaGCCAACACAGCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TISHSAEDSFAPSSDDINPHVHL*PTQLAG
Trigger: GCCTGCAAGCTGTGTTGGCCATAGATGGACATGAGG...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp GCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCTAGGGAAACAGATATATCAGCACGGCTATCCTaGCCTTTTCACACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: AFSHSGSSLPSPPRETDISARLS*PFHTVG
Trigger: ACCCACTGTGTGAAAAGGCCAGGATAGCCGTGCTGA...TATATCTGTTTCCCTAGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTACCAGTGTCCACACCGTaGCACAGCCACTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLPVSTP*HSHFCL
Trigger: CAGGCAGAAGTGGCTGTGCCACGGTGTGGACACTGG...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGAAGGCCATAGACAGGTaGCTTCTATGTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGKAIDR*LLCQNL
Trigger: AAGATTTTGACATAGAAGCCACCTGTCTATGGCCTT...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGGTCCTGGGTCTTTTGTaGGAACTGTTGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RDAKSQSRAKALALLRKGVLGLL*ELLQRR
Trigger: TCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGAC...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTCCAGGTCACAAAGATTaGTTTGGAAATGGATACATG +
Preference number: 4 (lower is better)
Translates to: SKNATLALEQLLGVVSRAPGHKD*FGNGYM
Trigger: CATGTATCCATTTCCAAACCAATCTTTGTGACCTGG...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATATTTTAGCAGCCATGTaGCGAGTGGTTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNILAAM*RVVCRR
Trigger: CCTCCTGCAAACCACTCGCCACATGGCTGCTAAAAT...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATCCTGTGTGTGCCACTaGAAGCACAGGGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKSCVCH*KHRAFS
Trigger: ACTGAAAGCCCTGTGCTTTCAGTGGCACACACAGGA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR TCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTAGTCTCTGAGCGATCCTaGAAGCCCTGCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLVSERS*KPCSFS
Trigger: GCTGAAGGAGCAGGGCTTTCAGGATCGCTCAGAGAC...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATTGGAGTGCAGTGGCGTaGTCTAGGTTCGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KSFGHESRNHSSRERFPDWSAVA*SRFAAA
Trigger: GGCTGCAGCGAACCTAGATCACGCCACTGCACTCCA...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGACAGCCACTTCTGCCTaGATCATAGAATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IISDIPMASTQSAFSKAMTATSA*IIEWLG
Trigger: CCCCAGCCATTCTATGATGCAGGCAGAAGTGGCTGT...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR GCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGAAACGGGCAGATCAATaGTTGGGAAAGATGATTTTA +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRKRADQ*LGKMIL
Trigger: TAAAATCATCTTTCCCAAGCATTGATCTGCCCGTTT...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACAGATTATGGTAGGAGTTaGTGCTTGAGTTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DDFSSHVASGLQEEIMETDYGRS*CLSWAA
Trigger: TGCTGCCCAACTCAAGCAGCAACTCCTACCATAATC...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGGAGGGCTCTCCCTATaGGTTGAGATTGAGACATGT +
Preference number: 4 (lower is better)
Translates to: TISHSAEDSFAPSSDDINGGLSL*VEIETC
Trigger: ACATGTCTCAATCTCAACCCATAGGGAGAGCCCTCC...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTACAGGCTGGAGTGCAGTaGCGTGATCTAGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLQAGVQ*RDLGSL
Trigger: CAGCGAACCTAGATCACGCCACTGCACTCCAGCCTG...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGAGATTGGTTTGGAAATaGATACATGATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRRLVWK*IHDPIW
Trigger: CCAGATTGGATCATGTATCCATTTCCAAACCAATCT...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTTGTGGGACATCTAGCTaGAGAGGTTCGGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGCGTSS*RGSGDV
Trigger: CACATCTCCCGAACCTCTCCAGCTAGATGTCCCACA...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATCTTCTTCATTCACCATaGGTTCCACCACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNLLHSP*VPPHSS
Trigger: ACTGGAATGTGGTGGAACTCATGGTGAATGAAGAAG...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TTGGGGAAACTCGTAGCATCACACACTTTACTGTGTGGTTTTGGATACTCTCCTCAAAGCTTTAACTTCTaGGCACAGAGAGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: LGKLVASHTLLCGFGYSPQSFNF*AQRGTH
Trigger: GTGCGTGCCTCTCTGTGCTCAGAAGTTAAAGCTTTG...AGGAGAGTATCCAAAACCACACAGTAAAGTGTGTGATGCTACGAGTTTCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR TCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTAGCTGTTGTGCCGACTTaGGATGCCTGTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLAVVPT*DACSMR
Trigger: CCTCATGGAACAGGCATCTCAAGTCGGCACAACAGC...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTGACGTCATTAGATCAATATCTGCATTTCCCCCTCTCTGTTACTCTATAGTTTGCTCTCAGAGCAGGTaGAGCCGCAGGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FDVIRSISAFPPLCYSIVCSQSR*SRRSLS
Trigger: GCTCAGAGACCTGCGGCTTCACCTGCTCTGAGAGCA...AACTATAGAGTAACAGAGAGGGGGAAATGCAGATATTGATCTAATGACGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATCACTGTGTTTGGAGATaGAGTTCCCACTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: TISHSAEDSFAPSSDDINHCVWR*SSHSKC
Trigger: GCATTTGGAGTGGGAACTTCATCTCCAAACACAGTG...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp ACAGGAGTGTCTCAGTCAAGGTTTATAGCTGTGAGCAACAGAGCTGGTTCTGGCTTGGAAATGGATACATaGTCCAATCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: TGVSQSRFIAVSNRAGSGLEMDT*SNLGQY
Trigger: GTATTGGCCCAGATTGGATCATGTATCCATTTCCAA...GCCAGAACCAGCTCTGTTGCTCACAGCTATAAACCTTGACTGAGACACTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCCTCCTTCAGCACAGGTaGCCCGGGTCCAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFLLQHR*PGSRVF
Trigger: GAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGAG...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACATATGGTAGGAGTTGCTaGTTGAGTTGGGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: DDFSSHVASGLQEEIMETYGRSC*LSWAAF
Trigger: AAATGCTGCCCAACTCAAGCAGCAACTCCTACCATA...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGATCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGSLMLQ*KMTSSF
Trigger: GAATGAAGAAGTCATCTTCCACTGCAACATTAAGGA...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTACACACTTTACTGTGTaGTTTTGGATACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFTHFTV*FWILSC
Trigger: ACAGGAGAGTATCCAAAACCACACAGTAAAGTGTGT...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGATATATACTACACATTaGTGCGTAAGAGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGIYTTH*CVRVES
Trigger: ACTTTCCACTCTTACGCACCAATGTGTAGTATATAT...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATGGTCTTTGAAGTTCTaGGGTGCAGGAGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKWSLKF*GAGGFE
Trigger: CTCAAACCCTCCTGCACCCCAGAACTTCAAAGACCA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAGCCAGTGCATTCCCCTaGTGGAGCATGGGTTACTTG +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCEASAFP*WSMGYL
Trigger: CAAGTAACCCATGCTCCACCAGGGGAATGCACTGGC...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp ACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTaGCGCCCTCCTCAGACGATATTAATGCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TREPSHILLRTL*RPPQTILMQKK
Trigger: CTTCTTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CAA 72 bp CTGGAGAGGTTCGGGAGATGTGGGACAATTTTTGTTTaGGGGGACTCAGCATCTATTCACCCTTATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LERFGRCGTIFV*GDSASIHPYSG
Trigger: TCCAGAATAAGGGTGAATAGATGCTGAGTCCCCCAAAACAAAAATTGTCCCACATCTCCCGAACCTCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGATCAACTCTGACAAGTaGAGCTTGGGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: IISDIPMASTQSAFSKAMINSDK*SLGWGF
Trigger: AAAACCCCAGCCCAAGCTTCACTTGTCAGAGTTGAT...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR GCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATAATGGCTGGGGCAGCTaGTGTTGTGCCGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: KSFGHESRNHSSRERFPDNGWGS*CCADLR
Trigger: TCTCAAGTCGGCACAACAGCAGCTGCCCCAGCCATT...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTGTAAAGGGTCTCTTATaGCTGGCTGAAGAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCVKGLL*LAEEFK
Trigger: TTTAAACTCTTCAGCCAGGCATAAGAGACCCTTTAC...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CATGAGGAGATCAGTAGGCATTCAGCACGGCTATCCTGGCCTTTTCACACAGTGCATTTTCAAAGGCCATaGGCTGGTAAAATGTTAACT +
Preference number: 4 (lower is better)
Translates to: HEEISRHSARLSWPFHTVHFQRP*AGKMLT
Trigger: AGTTAACATTTTACCAGCCCATGGCCTTTGAAAATG...CACTGTGTGAAAAGGCCAGGATAGCCGTGCTGAATGCCTACTGATCTCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATTTCATGGTCCCCAGTaGTCTTTGAAGTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKFHGPQ*SLKFWG
Trigger: ACCCCAGAACTTCAAAGACCACTGGGGACCATGAAA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGCCAGGTCACAAAGATTaGTTTGGAAATGGATACATG +
Preference number: 4 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVPGHKD*FGNGYM
Trigger: CATGTATCCATTTCCAAACCAATCTTTGTGACCTGG...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp ATTATATCCCCTACTTTGTCCTGTGTGAGAAGGAACTaGTGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: IISPTLSCVRRN*CKQFHGPQWSL
Trigger: CAAAGACCACTGGGGACCATGAAACTGCTTGCACAAGTTCCTTCTCACACAGGACAAAGTAGGGGATATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
3UTR CAA 72 bp AATAAATGCACAGGGAAGAAACGGGCAGATCAATGCTaGGGAAAGATGATTTTAGCAGCCATGTGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: NKCTGKKRADQC*GKMILAAMWRV
Trigger: CACTCGCCACATGGCTGCTAAAATCATCTTTCCCAAGCATTGATCTGCCCGTTTCTTCCCTGTGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp TGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTaGTTGAGGGCTCACTATGGGACAAGTGCTATGGTG +
Preference number: 4 (lower is better)
Translates to: WSIDCHPLLTVC*LRAHYGTSAMV
Trigger: CACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCTCAGAGGAGGCAAATTaGTGGCTGGAAGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFSEEAN*WLEASP
Trigger: TGGCGATGCTTCCAGCCAGCAATTTGCCTCCTCTGA...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR GCA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGGATAGTGTCATGCACTaGTGGCATATCAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: IISDIPMASTQSAFSKAMDSVMH*WHINSV
Trigger: CACTGAGTTGATATGCCAGCAGTGCATGACACTATC...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR GCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATCTCCTTCAGCACAGGTaGCCCGGGTCCAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNLLQHR*PGSRVF
Trigger: GAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGAG...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TTTGACGTCATTAGATCAATATCTGCATTTCCCCCTCTCTGTTACTCTATAGTTCTGTCTCGCCTTACCTaGCCTTCAGCTCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: FDVIRSISAFPPLCYSIVLSRLT*PSALVM
Trigger: CATGACCAGAGCTGAAGGGCAGGTAAGGCGAGACAG...AACTATAGAGTAACAGAGAGGGGGAAATGCAGATATTGATCTAATGACGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TTCTACTCCAGAGGGACCAGGGAACCATCTCACATTCTGCTGAGGACTCTTTTGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: FYSRGTREPSHILLRTLLSLMLQ*KMTSSF
Trigger: GAATGAAGAAGTCATCTTCCACTGCAACATTAAGGA...CAAAAGAGTCCTCAGCAGAATGTGAGATGGTTCCCTGGTCCCTCTGGAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp CCGGTATTTCTTAGAATCCGTGTACTGTCTCGCCTTACCTGCCCTTCAGCTCTGAATCTCAGATGCTTCTaGCAACTATGTGTTATTAGT +
Preference number: 4 (lower is better)
Translates to: PVFLRIRVLSRLTCPSALNLRCF*QLCVIS
Trigger: ACTAATAACACATAGTTGCCAGAAGCATCTGAGATT...CAGAGCTGAAGGGCAGGTAAGGCGAGACAGTACACGGATTCTAAGAAATACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATATACATGATCCAATCTaGGCCAATACAGTACAAGTC +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNIHDPI*ANTVQV
Trigger: GACTTGTACTGTATTGGCCCAGATTGGATCATGTAT...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAGTAGAGACTCAGAGCTaGGGAGAATCACGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCEVETQS*GESRWV
Trigger: AACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTAGGGTCTCTTATGCCTaGCTGAAGAGTTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCRVSYA*LKSLNF
Trigger: AAAATTTAAACTCTTCAGCCAGGCATAAGAGACCCT...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAAGTTGCTGCTTGAGTTaGGCAGCATTTACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCESCCLS*AAFTRW
Trigger: CCACCTGGTAAATGCTGCCCAACTCAAGCAGCAACT...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCAGCTCAATGTGTACCTaGTATTGGAGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFSSMCT*YWRALP
Trigger: AGGGAGAGCCCTCCAATATCAGGTACACATTGAGCT...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCGGCAAAGGAGGAGGATaGCAGCACATTCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFGKGGG*QHILQR
Trigger: TCTCTGAAGAATGTGCTGTCATCCTCCTCCTTTGCC...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATGGGCACTTTTGCCTTTaGTGGGGAGCAAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNGHFCL*WGASCV
Trigger: GACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCC...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAGGCAGGATGGAGCATTaGTTGCCATCCTTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCEGRMEH*LPSFVN
Trigger: GTTAACAAAGGATGGCAATCAATGCTCCATCCTGCC...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCTGTGCCGACTTGAGATaGCTGTTCCATGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFCADLR*LFHEEI
Trigger: GATCTCCTCATGGAACAGGCATCTCAAGTCGGCACA...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATAAACGGGCAGATCAATaGTTGGGAAAGATGATTTTA +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNKRADQ*LGKMIL
Trigger: TAAAATCATCTTTCCCAAGCATTGATCTGCCCGTTT...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNSLMLQ*KMTSSF
Trigger: GAATGAAGAAGTCATCTTCCACTGCAACATTAAGGA...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp ATTTTATTGTTTCCTTCAGCTCAATGTGTACCTGATATTGGAGGGCTCTCCCTATTTCATGGTCCCCAGTaGTCTTTGAAGTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILLFPSAQCVPDIGGLSLFHGPQ*SLKFWG
Trigger: ACCCCAGAACTTCAAAGACCACTGGGGACCATGAAA...TAGGGAGAGCCCTCCAATATCAGGTACACATTGAGCTGAAGGAAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAGTACAAGTCAGGTCCTaGGTCTTTTGTGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCEVQVRS*VFCGNC
Trigger: ACAGTTCCCACAAAAGACCCAGGACCTGACTTGTAC...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp TCATGTCAAGACTCTGTTTCCACCAAGACTCACAGTGTGGAGAGGTCCCCAAATTATTCACCCTTATTCTaGAAACAGACCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: SCQDSVSTKTHSVERSPNYSPLF*KQTHHF
Trigger: AAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATA...ATTTGGGGACCTCTCCACACTGTGAGTCTTGGTGGAAACAGAGTCTTGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
3UTR CAA 72 bp AAAACCAGCACCAGACACTGGGAGGAAGAATCTCTTTaGAGCCTCAGTTTCTCAGTAAGGAGATGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: KTSTRHWEEESL*SLSFSVRRCLN
Trigger: ATTTAAGCATCTCCTTACTGAGAAACTGAGGCTCAAAAGAGATTCTTCCTCCCAGTGTCTGGTGCTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAACTTCTTCATTCACCATaGGTTCCACCACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCELLHSP*VPPHSS
Trigger: ACTGGAATGTGGTGGAACTCATGGTGAATGAAGAAG...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCATCAACTCTGACAAGTaGAGCTTGGGCTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFINSDK*SLGWGF
Trigger: AAAACCCCAGCCCAAGCTTCACTTGTCAGAGTTGAT...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAAAGCACTGGCATTGTTaGGAAAAGGGCAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCEKHWHC*EKGRSV
Trigger: AACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTT...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp CTTTATATACAATTTGTTATCATATCAGACATACCTATGGCTTCCACCCAGAGTGGCTTCCACCCAGAGTaGATTTTCAAAGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LYIQFVIISDIPMASTQSGFHPE*IFKGHG
Trigger: CCCATGGCCTTTGAAAATGCACTCTGGGTGGAAGCC...ACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATGAGGAGGCAAATTGCTaGCTGGAAGCATCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNEEANC*LEASPK
Trigger: CTTTGGCGATGCTTCCAGCCAGCAATTTGCCTCCTC...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATAGCTCAATGTGTACCTaGTATTGGAGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNSSMCT*YWRALP
Trigger: AGGGAGAGCCCTCCAATATCAGGTACACATTGAGCT...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAAAGGGAGAGATTTCCTaGTTCAAGATAAAATGCTCA +
Preference number: 4 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKKGEIS*FKIKCS
Trigger: TGAGCATTTTATCTTGAATCAGGAAATCTCTCCCTT...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR TCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCCTTGTAGTGCTACTCTaGAGGCACAAATACAACCTG +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFLVVLL*RHKYNL
Trigger: CAGGTTGTATTTGTGCCTTCAGAGTAGCACTACAAG...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TTGGGGAAACTCGTAGCATCACACACTTTACTGTGTGGTTTTGGATACTCTCCTTTGAGTACTAAACAATaGAATCTCAGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGKLVASHTLLCGFGYSPLSTKQ*NLRCFW
Trigger: CCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAA...AGGAGAGTATCCAAAACCACACAGTAAAGTGTGTGATGCTACGAGTTTCCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATATATATACTACACATTaGTGCGTAAGAGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TISHSAEDSFAPSSDDINIYTTH*CVRVES
Trigger: ACTTTCCACTCTTACGCACCAATGTGTAGTATATAT...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTTATTCACCCTTATTCTaGAAACAGACCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGYSPLF*KQTHHF
Trigger: AAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATA...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CCA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTAGGGTCTCTTATGCCTaGCTGAAGAGTTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGRVSYA*LKSLNF
Trigger: AAAATTTAAACTCTTCAGCCAGGCATAAGAGACCCT...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR TCA 90 bp TTTGACGTCATTAGATCAATATCTGCATTTCCCCCTCTCTGTTACTCTATAGTTCTTCTTCATTCACCATaGGTTCCACCACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: FDVIRSISAFPPLCYSIVLLHSP*VPPHSS
Trigger: ACTGGAATGTGGTGGAACTCATGGTGAATGAAGAAG...AACTATAGAGTAACAGAGAGGGGGAAATGCAGATATTGATCTAATGACGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATCTACTTTGTCCTGTGTaGGAAGGAACTTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNLLCPV*EGTCAS
Trigger: GCTTGCACAAGTTCCTTCTCACACAGGACAAAGTAG...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATGTTCCTCTTAATCAGTaGCAGAGGAGGATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNVPLNQ*QRRIRP
Trigger: TGGCCTTATCCTCCTCTGTCACTGATTAAGAGGAAC...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp TTGGGGAAACTCGTAGCATCACACACTTTACTGTGTGGTTTTGGATACTCTCCTTATACTACACATTGGTaGGTAAGAGTGGAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LGKLVASHTLLCGFGYSPYTTHW*VRVESK
Trigger: TTTACTTTCCACTCTTACGCACCAATGTGTAGTATA...AGGAGAGTATCCAAAACCACACAGTAAAGTGTGTGATGCTACGAGTTTCCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR GCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATACAGTCAACAAATCATaGGGGAAGAGGCTCTATGTA +
Preference number: 4 (lower is better)
Translates to: KSFGHESRNHSSRERFPDTVNKS*GKRLYV
Trigger: TACATAGAGCCTCTTCCCGCATGATTTGTTGACTGT...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TTGGGGAAACTCGTAGCATCACACACTTTACTGTGTGGTTTTGGATACTCTCCTAATCTCAGATGCTTCTaGCAACTATGTGTTATTAGT +
Preference number: 4 (lower is better)
Translates to: LGKLVASHTLLCGFGYSPNLRCF*QLCVIS
Trigger: ACTAATAACACATAGTTGCCAGAAGCATCTGAGATT...AGGAGAGTATCCAAAACCACACAGTAAAGTGTGTGATGCTACGAGTTTCCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAATACATGATCCAATCTaGGCCAATACAGTACAAGTC +
Preference number: 4 (lower is better)
Translates to: QHLFTLILETDPPFSFCEIHDPI*ANTVQV
Trigger: GACTTGTACTGTATTGGCCCAGATTGGATCATGTAT...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR GCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCCAATGGAATCTCAGATaGTTCTGGCAACTATGTGTT +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFQWNLR*FWQLCV
Trigger: AACACATAGTTGCCAGAAGCATCTGAGATTCCATTG...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATAAGATTCAACATACCTaGCCATGTACCCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNKIQHT*PCTPCI
Trigger: GATACAGGGGGTACATGGGCAGGTATGTTGAATCTT...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATAGTGTCATGCACTGCTaGCATATCAACTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNSVMHC*HINSVS
Trigger: AGACACTGAGTTGATATGCCAGCAGTGCATGACACT...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp CTTTATATACAATTTGTTATCATATCAGACATACCTATGGCTTCCACCCAGAGTTATCAGACATACCTATaGCTTCCACCCAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LYIQFVIISDIPMASTQSYQTYL*LPPRVH
Trigger: ATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATA...ACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTGACGTCATTAGATCAATATCTGCATTTCCCCCTCTCTGTTACTCTATAGTTGTTACAAAAGATATGTaGAAACCAGCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: FDVIRSISAFPPLCYSIVVTKDM*KPAPDT
Trigger: AGTGTCTGGTGCTGGTTTTCACATATCTTTTGTAAC...AACTATAGAGTAACAGAGAGGGGGAAATGCAGATATTGATCTAATGACGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATTTTTCCCAGCAATGCTaGTTCAGACATCATTTGCCT +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNFSQQC*FRHHLP
Trigger: AGGCAAATGATGTCTGAATCAGCATTGCTGGGAAAA...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR GCA 90 bp CTTTATATACAATTTGTTATCATATCAGACATACCTATGGCTTCCACCCAGAGTTTGCTGATAGTGTCATaGACTGCTGGCATATCAACT +
Preference number: 4 (lower is better)
Translates to: LYIQFVIISDIPMASTQSLLIVS*TAGIST
Trigger: AGTTGATATGCCAGCAGTGCATGACACTATCAGCAA...ACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CCA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFSLMLQ*KMTSSF
Trigger: GAATGAAGAAGTCATCTTCCACTGCAACATTAAGGA...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATTTTACTGTGTGGTTTTaGATACTCTCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNFTVWF*ILSCVC
Trigger: GCACACACAGGAGAGTATCCAAAACCACACAGTAAA...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR TCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATGTTACAAAAGATATGTaGAAACCAGCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNVTKDM*KPAPDT
Trigger: AGTGTCTGGTGCTGGTTTTCACATATCTTTTGTAAC...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR GCA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATTATACTACACATTGGTaGGTAAGAGTGGAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: KSFGHESRNHSSRERFPDYTTHW*VRVESK
Trigger: TTTACTTTCCACTCTTACGCACCAATGTGTAGTATA...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CCA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATTTGAGTACTAAACAATaGAATCTCAGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNLSTKQ*NLRCFW
Trigger: CCAGAAGCATCTGAGATTCCATTGTTTAGTACTCAA...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS TCA 90 bp GCTCCACCGGTAGGCCTGCCGCGCTGTAGGGCCCATAGCGCAGGATaGCCACTGCGTTCTTGGGCATCGCCAGGCCTCCGCCGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: APPVGLPRCRAHSAG*PLRSWASPGLRRRR
Trigger: TCTGCGGCGGCGGAGGCCTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGCCCTACAGCGCGGCAGGCCTACCGGTGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAATATGGCCAACACAGCTaGCAGGCCCTGCAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: EQGCREPERGAHRSAGREYGQHS*QALQAE
Trigger: TTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCATA...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAAGCCCTCGAGCAACTGTaGGGTGTTGTGTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: EQGCREPERGAHRSAGREALEQL*GVVSRA
Trigger: AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGC...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTATGACCACTGCGTTCTaGGGCATCGCCAGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSMTTAF*GIARPP
Trigger: CGGAGGCCTGGCGATGCCCAAGAACGCAGTGGTCAT...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCTGGGGAGAATCACGTaGGGTTTGCCACAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPLGRIT*GLPQVA
Trigger: GGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAG...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GTCTCGCCTTACCTGCCCTTCAGCTCTGGTCATGAAGCCAAGGAGGGCAGGTCTAGCAAGCTGTGTCTCTaGCTTCTGGGCAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VSPYLPFSSGHEAKEGRSSKLCL*LLGREV
Trigger: CACCTCCCTGCCCAGAAGCAAGAGACACAGCTTGCT...AGACCTGCCCTCCTTGGCTTCATGACCAGAGCTGAAGGGCAGGTAAGGCGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGCTGGGGAGAATCACGTaGGGTTTGCCACAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQLGRIT*GLPQVA
Trigger: GGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAG...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GCCGTGTCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGAGTTGCTGCTTGAGTaGGGCAGCATTTACCAGGTG +
Preference number: 5 (lower is better)
Translates to: AVSYHKTRPGRSPWSCCRELLLE*GSIYQV
Trigger: CACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTC...TCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGACACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TCCTTCAGCACAGGTGCCCCGGGTCCAGAGTTTTCTGTTAGGGAATCTGGTTTTTATGGCCAACACAGCTaGCAGGCCCTGCAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: SFSTGAPGPEFSVRESGFYGQHS*QALQAE
Trigger: TTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCATA...AAAACCAGATTCCCTAACAGAAAACTCTGGACCCGGGGCACCTGTGCTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp AAGCACAGGGCACTTTTGCCTTTGATGGGGAGCAAGCTGTGTCTCTTGCTTCTGCTGGGGCAGCTGCTGTaGTGCCGACTTGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: KHRALLPLMGSKLCLLLLLGQLL*CRLEMP
Trigger: AGGCATCTCAAGTCGGCACAACAGCAGCTGCCCCAG...CAGAAGCAAGAGACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGGCGAAAGCACTGGCATaGTTGAGAAAAGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQAKALA*LRKGQI
Trigger: GATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGC...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTTGGAGCATGGGTTACTaGCTCATGTCAAGACTCTGT +
Preference number: 5 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPWSMGY*LMSRLC
Trigger: ACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCA...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GAGCAAGGCTGCAGGGAACCAGAGAGGGGAGCCCACCGTTCTGCTGGGAGAGAATTAACTGTGTGTTTGTaGAGGGCTCACTATGGGACA +
Preference number: 5 (lower is better)
Translates to: EQGCREPERGAHRSAGRELTVCL*RAHYGT
Trigger: TGTCCCATAGTGAGCCCTCAACAAACACACAGTTAA...TTCTCTCCCAGCAGAACGGTGGGCTCCCCTCTCTGGTTCCCTGCAGCCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCCTCAGAGGAGGCAAATaGCTGGCTGGAAGCATCGCC +
Preference number: 5 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLLRGGK*LAGSIA
Trigger: GGCGATGCTTCCAGCCAGCAATTTGCCTCCTCTGAG...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp CAAGGAGAGGCTCTGAAGCCAGAGGTTCAGGCCGTGTCATACCACAAAACCAGGGAGTTGCTGCTTGAGTaGGGCAGCATTTACCAGGTG +
Preference number: 5 (lower is better)
Translates to: QGEALKPEVQAVSYHKTRELLLE*GSIYQV
Trigger: CACCTGGTAAATGCTGCCCAACTCAAGCAGCAACTC...CCTGGTTTTGTGGTATGACACGGCCTGAACCTCTGGCTTCAGAGCCTCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTGGTAGGAGTTGCTGCTaGAGTTGGGCAGCATTTACC +
Preference number: 5 (lower is better)
Translates to: SKNATLALEQLLGVVSRAGRSCC*SWAAFT
Trigger: GGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACC...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCTAGGGAAACAGATATAATGACCACTGCGTTCTaGGGCATCGCCAGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: AFSHSGSSLPSPPRETDIMTTAF*GIARPP
Trigger: CGGAGGCCTGGCGATGCCCAAGAACGCAGTGGTCAT...TATATCTGTTTCCCTAGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp TGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTCTGCTGGTGGTCCTCTaGTCACTACTTGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: CPGLAGWSIDCHPLLTVCLLVVL*SLLGVS
Trigger: GCTCACCCCAAGTAGTGACAAGAGGACCACCAGCAG...ACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp CCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGTGTTTGCTGCTGGTGGTCCTCTaGTCACTACTTGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PGLAGWSIDCHPLLTVCLLLVVL*SLLGVS
Trigger: GCTCACCCCAAGTAGTGACAAGAGGACCACCAGCAG...CAAACACACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGGGCGTGCCCAGGTCACAAAGATaGGTTTGGAAATGGATACAT +
Preference number: 5 (lower is better)
Translates to: GTSAMVGSRVGGTKTWGVPRSQR*VWKWIH
Trigger: ATGTATCCATTTCCAAACCAATCTTTGTGACCTGGG...CACGCCCCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTGCGAAAGCACTGGCATaGTTGAGAAAAGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: SKNATLALEQLLGVVSRAAKALA*LRKGQI
Trigger: GATCTGCCCTTTTCTCAACAATGCCAGTGCTTTCGC...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGTGGGCTCAAAAGGAATaGTTTGAGAGGAAACCAGGA +
Preference number: 5 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQWAQKE*FERKPG
Trigger: TCCTGGTTTCCTCTCAAACAATTCCTTTTGAGCCCA...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TCATACCACAAAACCAGGCCTGGAAGGAGCCCATGGTCATGCTGCCGAGGCCAGTTAACTGTGTGTTTGTaGAGGGCTCACTATGGGACA +
Preference number: 5 (lower is better)
Translates to: SYHKTRPGRSPWSCCRGQLTVCL*RAHYGT
Trigger: TGTCCCATAGTGAGCCCTCAACAAACACACAGTTAA...CTGGCCTCGGCAGCATGACCATGGGCTCCTTCCAGGCCTGGTTTTGTGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS TCA 90 bp GTCGATTTCAGTAGGGCTGAGTTCCCCTCTTCTCTAGTCCAGAAATaGGCATGTGATCCAGGCCTGGCCAACCCAGGTCACAAAGATTGG +
Preference number: 5 (lower is better)
Translates to: VDFSRAEFPSSLVQK*ACDPGLANPGHKDW
Trigger: CCAATCTTTGTGACCTGGGTTGGCCAGGCCTGGATCACATGCTCATTTCTGGACTAGAGAAGAGGGGAACTCAGCCCTACTGAAATCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CCA 90 bp TGCCTGTTCCATGAGGAGATCAGTAGGCATTCAGCACGGCTATCCTaGCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCGAACT +
Preference number: 5 (lower is better)
Translates to: CLFHEEISRHSARLS*PFHTVGLVYHRLRT
Trigger: AGTTCGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGCCAGGATAGCCGTGCTGAATGCCTACTGATCTCCTCATGGAACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS CCA 90 bp GTGAAATGTCAGCCTGGAGCTGCTGGTGGTCCTCTTGTCACTACTTaGGGTGAGCTTGCCGAACTCCAAGTCCTTAATGTTGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: VKCQPGAAGGPLVTT*GELAELQVLNVAVE
Trigger: TTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAGTAGTGACAAGAGGACCACCAGCAGCTCCAGGCTGACATTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATCTGGGGCAGCTGCTGTaGTGCCGACTTGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: TISHSAEDSFAPSSDDINLGQLL*CRLEMP
Trigger: AGGCATCTCAAGTCGGCACAACAGCAGCTGCCCCAG...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp ACGTGGGGCGTGGGGGAGGTGACATGCTGCTGCTTTGAGGAGCTCTATGACCCTCTTTTGTGGGAACTGTaGCAAAGGAGAAACTTTCAT +
Preference number: 5 (lower is better)
Translates to: TWGVGEVTCCCFEELYDPLLWEL*QRRNFH
Trigger: ATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAAG...AGGGTCATAGAGCTCCTCAAAGCAGCAGCATGTCACCTCCCCCACGCCCCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TTGTGTCCAGGGCTGGCAGGATGGAGCATTGATTGCCATCCTTTGTTAACTGTGAGAATCACGTTGGGTTaGCCACAGGTTGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LCPGLAGWSIDCHPLLTVRITLG*PQVACG
Trigger: CCCACAGGCAACCTGTGGCAAACCCAACGTGATTCT...CACAGTTAACAAAGGATGGCAATCAATGCTCCATCCTGCCAGCCCTGGACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GTGTGTTTGTTGAGGGCTCACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTACATGTGGCGAGTGGTTaGCAGGAGGAGATAATGGAG +
Preference number: 5 (lower is better)
Translates to: VCLLRAHYGTSAMVGSRVHVASG*QEEIME
Trigger: CTCCATTATCTCCTCCTGCAAACCACTCGCCACATG...TACCCTAGAGCCCACCATAGCACTTGTCCCATAGTGAGCCCTCAACAAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGATGGGCTCAAAAGGAATaGTTTGAGAGGAAACCAGGA +
Preference number: 5 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRWAQKE*FERKPG
Trigger: TCCTGGTTTCCTCTCAAACAATTCCTTTTGAGCCCA...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGATTGTTAACTGTGTGTTaGTTGAGGGCTCACTATGGG +
Preference number: 5 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRLLTVC*LRAHYG
Trigger: CCCATAGTGAGCCCTCAACAAACACACAGTTAACAA...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATATGGCCAACACAGCTaGCAGGCCCTGCAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKYGQHS*QALQAE
Trigger: TTCCGCCTGCAGGGCCTGCAAGCTGTGTTGGCCATA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCAATGTGTACCTGATATaGGAGGGCTCTCCCTATGGG +
Preference number: 5 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLNVYLI*EGSPYG
Trigger: CCCATAGGGAGAGCCCTCCAATATCAGGTACACATT...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGTGTGTGAGAAGGAACTaGTGCAAGCAGTTTCATGGT +
Preference number: 5 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGCVRRN*CKQFHG
Trigger: ACCATGAAACTGCTTGCACAAGTTCCTTCTCACACA...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp GCTGCTCTCGAACTCCTGTGTTCAAACAAATCCACCCACCTTGGATTCCCAAAGAGGGCACTTTTGCCTTaGATGGGGAGCAAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: AALELLCSNKSTHLGFPKRALLP*MGSKLC
Trigger: ACACAGCTTGCTCCCCATCAAAGGCAAAAGTGCCCT...CTTTGGGAATCCAAGGTGGGTGGATTTGTTTGAACACAGGAGTTCGAGAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp GGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGAACCAGAGAGGGACAATTTTTGTTTaGGGGGACTCAGCATCTATT +
Preference number: 5 (lower is better)
Translates to: GARHSSEPMQSKAAGNQRGTIFV*GDSASI
Trigger: AATAGATGCTGAGTCCCCCAAAACAAAAATTGTCCC...TCTCTGGTTCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp AGATATAGGGTGCCAGGCATTCATCAGAGCCTATGCAGAGCAAGGCTGCAGGGACTTACCCCATTAACCTaGCTAGATGCTGGATGTCGT +
Preference number: 5 (lower is better)
Translates to: RYRVPGIHQSLCRARLQGLTPLT*LDAGCR
Trigger: ACGACATCCAGCATCTAGCAAGGTTAATGGGGTAAG...TCCCTGCAGCCTTGCTCTGCATAGGCTCTGATGAATGCCTGGCACCCTATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp AGAGATGCCAAATCCCAAAGCAGGGCGAAAGCACTGGCATTGTTGAGAAAAGGGGGTAGGAGTTGCTGCTaGAGTTGGGCAGCATTTACC +
Preference number: 5 (lower is better)
Translates to: RDAKSQSRAKALALLRKGGRSCC*SWAAFT
Trigger: GGTAAATGCTGCCCAACTCAAGCAGCAACTCCTACC...CCCTTTTCTCAACAATGCCAGTGCTTTCGCCCTGCTTTGGGATTTGGCATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp AGTAAGAATGCCACACTGGCCCTCGAGCAACTGTTGGGTGTTGTGTCCAGGGCTTTGTTAACTGTGTGTTaGTTGAGGGCTCACTATGGG +
Preference number: 5 (lower is better)
Translates to: SKNATLALEQLLGVVSRALLTVC*LRAHYG
Trigger: CCCATAGTGAGCCCTCAACAAACACACAGTTAACAA...AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGCCAGTGTGGCATTCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp CACTATGGGACAAGTGCTATGGTGGGCTCTAGGGTAGGAGGCACAAAGACGTGGTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCT +
Preference number: 5 (lower is better)
Translates to: HYGTSAMVGSRVGGTKTWSKSLM*QWKMTS
Trigger: AGAAGTCATCTTCCACTGCAACATTAAGGACTTGGA...CCACGTCTTTGTGCCTCCTACCCTAGAGCCCACCATAGCACTTGTCCCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAAGGTCCCCAGTGGTCTTaGAAGTTCTGGGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKGPQWS*KFWGAG
Trigger: TCCTGCACCCCAGAACTTCAAAGACCACTGGGGACC...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp TGCAAGCAGTTTCATGGTCCCCAGTGGTCTTTGAAGTTCTGGGGTGCAGGAGGGATTATATCCCCTACTTaGTCCTGTGTGAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: CKQFHGPQWSLKFWGAGGIISPT*SCVRRN
Trigger: GTTCCTTCTCACACAGGACAAAGTAGGGGATATAAT...CCCTCCTGCACCCCAGAACTTCAAAGACCACTGGGGACCATGAAACTGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCAGGATTCCACTGTGTTaGGAGATGAAGTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLRIPLC*EMKFPL
Trigger: GAGTGGGAACTTCATCTCCAAACACAGTGGAATCCT...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS TCA 90 bp GCCTGGCCAACCCAGGTCACAAAGATTGGTTTGGAAATGGATACATaGTCCAATCTGGGCCAATACAGTACAAGTCAGGTCCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: AWPTQVTKIGLEMDT*SNLGQYSTSQVLGL
Trigger: AAGACCCAGGACCTGACTTGTACTGTATTGGCCCAGATTGGATCATGTATCCATTTCCAAACCAATCTTTGTGACCTGGGTTGGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATAAGCACAGGGCACTTTaGCCTTTGATGGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: TISHSAEDSFAPSSDDINKHRAL*PLMGSK
Trigger: CTTGCTCCCCATCAAAGGCAAAAGTGCCCTGTGCTT...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAGCCCTCGAGCAACTGTaGGGTGTTGTGTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QHLFTLILETDPPFSFCEALEQL*GVVSRA
Trigger: AGCCCTGGACACAACACCCAACAGTTGCTCGAGGGC...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CCA 90 bp GCATCGCCAAAGGGCTTACCGAACTCCAAGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTCACCATGAGTTCCACCACATTCCAG +
Preference number: 5 (lower is better)
Translates to: ASPKGLPNSKSLMLQ*KMTSSFTMSSTTFQ
Trigger: CTGGAATGTGGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGTAAGCCCTTTGGCGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS CCA 90 bp CTACTTGGGGTGAGCTTGCCGAACTCCAAGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTCACCATGAGTTCCACCACATTCCAG +
Preference number: 5 (lower is better)
Translates to: LLGVSLPNSKSLMLQ*KMTSSFTMSSTTFQ
Trigger: CTGGAATGTGGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp CTCTTTAACTCTATGGGGCTGTGTTCTACTCCAGAGGGACCAGGGAACCATCTCTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCT +
Preference number: 5 (lower is better)
Translates to: LFNSMGLCSTPEGPGNHLSKSLM*QWKMTS
Trigger: AGAAGTCATCTTCCACTGCAACATTAAGGACTTGGA...GAGATGGTTCCCTGGTCCCTCTGGAGTAGAACACAGCCCCATAGAGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGCCTGTTCTGAGCACTTaGAGTACTAAACAATGGAAT +
Preference number: 5 (lower is better)
Translates to: HEGARMSSTLKHRALLPLPVLST*STKQWN
Trigger: ATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGG...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp GAGCTCTATGACCCTCCCAAGACACACAGACACACACACACACACACACACACACCCAGGTCACAAAGATaGGTTTGGAAATGGATACAT +
Preference number: 5 (lower is better)
Translates to: ELYDPPKTHRHTHTHTHTPRSQR*VWKWIH
Trigger: ATGTATCCATTTCCAAACCAATCTTTGTGACCTGGG...TGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTCTTGGGAGGGTCATAGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535836.1
CDS-3UTR CAA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTCATGTGGCGAGTGGTTaGCAGGAGGAGATAATGGAG +
Preference number: 5 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGHVASG*QEEIME
Trigger: CTCCATTATCTCCTCCTGCAAACCACTCGCCACATG...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp ACTTCAACACGGGAATACAGTTGTAGAGACTCAGAGCTGGGGAGAATCACGTTGCTTACCCCATTAACCTaGCTAGATGCTGGATGTCGT +
Preference number: 5 (lower is better)
Translates to: TSTREYSCRDSELGRITLLTPLT*LDAGCR
Trigger: ACGACATCCAGCATCTAGCAAGGTTAATGGGGTAAG...CAACGTGATTCTCCCCAGCTCTGAGTCTCTACAACTGTATTCCCGTGTTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGAATGTGTACCTGATATaGGAGGGCTCTCCCTATGGG +
Preference number: 5 (lower is better)
Translates to: IISDIPMASTQSAFSKAMNVYLI*EGSPYG
Trigger: CCCATAGGGAGAGCCCTCCAATATCAGGTACACATT...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp CATGAAGGCGCCCGAATGTCTAGCACGTTGAAGCACAGGGCACTTTTGCCTTTGAATATATACTACACATaGGTGCGTAAGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: HEGARMSSTLKHRALLPLNIYYT*VRKSGK
Trigger: CTTTCCACTCTTACGCACCAATGTGTAGTATATATT...CAAAGGCAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCGGGCGCCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAACGAATGTCTAGCACGTaGAAGCACAGGGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKRMSST*KHRALL
Trigger: CAAAAGTGCCCTGTGCTTCAACGTGCTAGACATTCG...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp CAGCATCTATTCACCCTTATTCTGGAAACAGACCCACCATTTTCCTTTTGTGAAAGAATCACGTTGGGTTaGCCACAGGTTGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QHLFTLILETDPPFSFCERITLG*PQVACG
Trigger: CCCACAGGCAACCTGTGGCAAACCCAACGTGATTCT...TTCACAAAAGGAAAATGGTGGGTCTGTTTCCAGAATAAGGGTGAATAGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS TCA 90 bp CAATTTGAATCCAGGCATGATACACTGATCATTTCAACTAGAAATTaGGGGACTCCTCAGAGGAGGCAAATTGCTGGCTGGAAGCATCGC +
Preference number: 5 (lower is better)
Translates to: QFESRHDTLIISTRN*GTPQRRQIAGWKHR
Trigger: GCGATGCTTCCAGCCAGCAATTTGCCTCCTCTGAGGAGTCCCTCAATTTCTAGTTGAAATGATCAGTGTATCATGCCTGGATTCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS CCA 90 bp TCTAGTTTACCATCGCCTCCGAACTCCAAGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTCACCATGAGTTCCACCACATTCCAG +
Preference number: 5 (lower is better)
Translates to: SSLPSPPNSKSLMLQ*KMTSSFTMSSTTFQ
Trigger: CTGGAATGTGGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGAGGCGATGGTAAACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACATCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCT +
Preference number: 5 (lower is better)
Translates to: DDFSSHVASGLQEEIMETSKSLM*QWKMTS
Trigger: AGAAGTCATCTTCCACTGCAACATTAAGGACTTGGA...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GCTGCTCTCGAACTCCTGTGTTCAAACAAATCCACCCACCTTGGATTCCCAAAGACCATGACCTCCCATTaGACGTCATTAGATCAATAT +
Preference number: 5 (lower is better)
Translates to: AALELLCSNKSTHLGFPKTMTSH*TSLDQY
Trigger: ATATTGATCTAATGACGTCAAATGGGAGGTCATGGT...CTTTGGGAATCCAAGGTGGGTGGATTTGTTTGAACACAGGAGTTCGAGAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp ACTTCAACACGGGAATACAGTTGTAGAGACTCAGAGCTGGGGAGAATCACGTTGGGGACAATTTTTGTTTaGGGGGACTCAGCATCTATT +
Preference number: 5 (lower is better)
Translates to: TSTREYSCRDSELGRITLGTIFV*GDSASI
Trigger: AATAGATGCTGAGTCCCCCAAAACAAAAATTGTCCC...CAACGTGATTCTCCCCAGCTCTGAGTCTCTACAACTGTATTCCCGTGTTGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp GAAAGCACTGGCATTGTTGAGAAAAGGGCAGATCAGTTCACTTCAGAAGATGGTTGGAGCATGGGTTACTaGCTCATGTCAAGACTCTGT +
Preference number: 5 (lower is better)
Translates to: ESTGIVEKRADQFTSEDGWSMGY*LMSRLC
Trigger: ACAGAGTCTTGACATGAGCAAGTAACCCATGCTCCA...ACCATCTTCTGAAGTGAACTGATCTGCCCTTTTCTCAACAATGCCAGTGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAACTTTACTGTGTGGTTTaGGATACTCTCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKLYCVV*DTLLCV
Trigger: CACACACAGGAGAGTATCCAAAACCACACAGTAAAG...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp ATCATATCAGACATACCTATGGCTTCCACCCAGAGTGCATTTTCAAAGGCCATGTCCTGTTTCCAATGTTaGGGGAAACTCGTAGCATCA +
Preference number: 5 (lower is better)
Translates to: IISDIPMASTQSAFSKAMSCFQC*GKLVAS
Trigger: TGATGCTACGAGTTTCCCCAAACATTGGAAACAGGA...CATGGCCTTTGAAAATGCACTCTGGGTGGAAGCCATAGGTATGTCTGATATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp CTTTATATACAATTTGTTATCATATCAGACATACCTATGGCTTCCACCCAGAGTGGTCCCCAGTGGTCTTaGAAGTTCTGGGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: LYIQFVIISDIPMASTQSGPQWS*KFWGAG
Trigger: TCCTGCACCCCAGAACTTCAAAGACCACTGGGGACC...ACTCTGGGTGGAAGCCATAGGTATGTCTGATATGATAACAAATTGTATATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp TCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATGCAAAATGTGTGAGAAGGAACTaGTGCAAGCAGTTTCATGGT +
Preference number: 5 (lower is better)
Translates to: SHSAEDSFAPSSDDINAKCVRRN*CKQFHG
Trigger: ACCATGAAACTGCTTGCACAAGTTCCTTCTCACACA...TTTTGCATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp GCCTTTTCACACAGTGGGTCTAGTTTACCATCGCCTCCTAGGGAAACAGATATAGAGGAAGAATCTCTTTaGAGCCTCAGTTTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: AFSHSGSSLPSPPRETDIEEESL*SLSFSV
Trigger: TACTGAGAAACTGAGGCTCAAAAGAGATTCTTCCTC...TATATCTGTTTCCCTAGGAGGCGATGGTAAACTAGACCCACTGTGTGAAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp GATGATTTTAGCAGCCATGTGGCGAGTGGTTTGCAGGAGGAGATAATGGAGACACTTTTGTGGGAACTGTaGCAAAGGAGAAACTTTCAT +
Preference number: 5 (lower is better)
Translates to: DDFSSHVASGLQEEIMETLLWEL*QRRNFH
Trigger: ATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAAG...TGTCTCCATTATCTCCTCCTGCAAACCACTCGCCACATGGCTGCTAAAATCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS-3UTR CAA 90 bp ACCATCTCACATTCTGCTGAGGACTCTTTTGCGCCCTCCTCAGACGATATTAATACCATGACCTCCCATTaGACGTCATTAGATCAATAT +
Preference number: 5 (lower is better)
Translates to: TISHSAEDSFAPSSDDINTMTSH*TSLDQY
Trigger: ATATTGATCTAATGACGTCAAATGGGAGGTCATGGT...ATTAATATCGTCTGAGGAGGGCGCAAAAGAGTCCTCAGCAGAATGTGAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS TCA 90 bp TTCAAACTCAGAAAGAAACCCAATTTGAATCCAGGCATGATACACTaGTCATTTCAACTAGAAATTGAGGGACTCCTCAGAGGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: FKLRKKPNLNPGMIH*SFQLEIEGLLRGGK
Trigger: TTTGCCTCCTCTGAGGAGTCCCTCAATTTCTAGTTGAAATGATCAGTGTATCATGCCTGGATTCAAATTGGGTTTCTTTCTGAGTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp AAAAGTTTTGGCCATGAAAGTAGAAATCACAGCTCAAGGGAGAGATTTCCTGATGAGGAAGAATCTCTTTaGAGCCTCAGTTTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: KSFGHESRNHSSRERFPDEEESL*SLSFSV
Trigger: TACTGAGAAACTGAGGCTCAAAAGAGATTCTTCCTC...ATCAGGAAATCTCTCCCTTGAGCTGTGATTTCTACTTTCATGGCCAAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS-3UTR CAA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCCCTGTTCTGAGCACTTaGAGTACTAAACAATGGAAT +
Preference number: 5 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFPVLST*STKQWN
Trigger: ATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGG...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCT +
Preference number: 5 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNSKSLM*QWKMTS
Trigger: AGAAGTCATCTTCCACTGCAACATTAAGGACTTGGA...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp TTTGACGTCATTAGATCAATATCTGCATTTCCCCCTCTCTGTTACTCTATAGTTAGAAAGAAACCCAATTaGAATCCAGGCATGATACAC +
Preference number: 5 (lower is better)
Translates to: FDVIRSISAFPPLCYSIVRKKPN*NPGMIH
Trigger: GTGTATCATGCCTGGATTCAAATTGGGTTTCTTTCT...AACTATAGAGTAACAGAGAGGGGGAAATGCAGATATTGATCTAATGACGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS-3UTR CAA 90 bp ATTTCACCTGTTCTGAGCACTTTGAGTACTAAACAATGGAATCTCAGATGCTTCAATATATACTACACATaGGTGCGTAAGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: ISPVLSTLSTKQWNLRCFNIYYT*VRKSGK
Trigger: CTTTCCACTCTTACGCACCAATGTGTAGTATATATT...GAAGCATCTGAGATTCCATTGTTTAGTACTCAAAGTGCTCAGAACAGGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS-3UTR CAA 90 bp TTTATTCCCTCAGGAGTCAGAAATAAATCTGTAGGAATAGCAAGGTTTCCAAATATTATATCCCCTACTTaGTCCTGTGTGAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: FIPSGVRNKSVGIARFPNIISPT*SCVRRN
Trigger: GTTCCTTCTCACACAGGACAAAGTAGGGGATATAAT...ATTTGGAAACCTTGCTATTCCTACAGATTTATTTCTGACTCCTGAGGGAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS GCA 72 bp TGCCGCGCTGTAGGGCCCATAGCGCAGGATGACCACTaGGTTCTTGGGCATCGCCAGGCCTCCGCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: CRAVGPIAQDDH*VLGHRQASAAA
Trigger: TGCGGCGGCGGAGGCCTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGCCCTACAGCGCGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS TCA 72 bp GTAGGCCTGCCGCGCTGTAGGGCCCATAGCGCAGGATaGCCACTGCGTTCTTGGGCATCGCCAGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: VGLPRCRAHSAG*PLRSWASPGLR
Trigger: GCGGAGGCCTGGCGATGCCCAAGAACGCAGTGGTCATCCTGCGCTATGGGCCCTACAGCGCGGCAGGCCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374111.8
ENST00000374113.3
CDS CCA 72 bp CAGCCTGGAGCTGCTGGTGGTCCTCTTGTCACTACTTaGGGTGAGCTTGCCGAACTCCAAGTCCTTAATGTT +
Preference number: 6 (lower is better)
Translates to: QPGAAGGPLVTT*GELAELQVLNV
Trigger: AACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAGTAGTGACAAGAGGACCACCAGCAGCTCCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 72 bp CTGCTGGTGGTCCTCTTGTCACTACTTGGGGTGAGCTaGCCGAACTCCAAGTCCTTAATGTTGCAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LLVVLLSLLGVS*PNSKSLMLQWK
Trigger: CTTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAGTAGTGACAAGAGGACCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 90 bp AGCCTGGAGCTGCTGGTGGTCCTCTTGTCACTACTTGGGGTGAGCTaGCCGAACTCCAAGTCCTTAATGTTGCAGTGGAAGATGACTTCT +
Preference number: 6 (lower is better)
Translates to: SLELLVVLLSLLGVS*PNSKSLMLQWKMTS
Trigger: AGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAGTAGTGACAAGAGGACCACCAGCAGCTCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 72 bp CAACTAGAAATTGAGGGACTCCTCAGAGGAGGCAAATaGCTGGCTGGAAGCATCGCCAAAGGGCTTACCGAA +
Preference number: 6 (lower is better)
Translates to: QLEIEGLLRGGK*LAGSIAKGLTE
Trigger: TTCGGTAAGCCCTTTGGCGATGCTTCCAGCCAGCAATTTGCCTCCTCTGAGGAGTCCCTCAATTTCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS GCA 72 bp GTACAAGTCAGGTCCTGGGTCTTTTGTGGGAACTGTTaGAAAGGAGAAACTTTCATCCTACACGGGCTGCTA +
Preference number: 6 (lower is better)
Translates to: VQVRSWVFCGNC*KGETFILHGLL
Trigger: TAGCAGCCCGTGTAGGATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGACCTGACTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CCA 72 bp CCATCGCCTCCGAACTCCAAGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTCACCATGAGTTCCACC +
Preference number: 6 (lower is better)
Translates to: PSPPNSKSLMLQ*KMTSSFTMSST
Trigger: GGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGAGGCGATGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8
CDS CAA 72 bp AGTACAAGTCAGGTCCTGGGTCTTTTGTGGGAACTGTaGCAAAGGAGAAACTTTCATCCTACACGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: STSQVLGLLWEL*QRRNFHPTRAA
Trigger: AGCAGCCCGTGTAGGATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGACCTGACTTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 90 bp CTGGAAGCATCGCCAAAGGGCTTACCGAACTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCTTCATTCACCATGAGTTCCACCACA +
Preference number: 6 (lower is better)
Translates to: LEASPKGLPNSKSLM*QWKMTSSFTMSSTT
Trigger: TGTGGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGTAAGCCCTTTGGCGATGCTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS CAA 90 bp TTGTCACTACTTGGGGTGAGCTTGCCGAACTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCTTCATTCACCATGAGTTCCACCACA +
Preference number: 6 (lower is better)
Translates to: LSLLGVSLPNSKSLM*QWKMTSSFTMSSTT
Trigger: TGTGGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAGTAGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS TCA 72 bp GTTCCACCACATTCCAGTCTTCTATCTTCTCTAGGATaGCCTCATGTCCATCTATGGCCAACACAGCTTGCA +
Preference number: 6 (lower is better)
Translates to: VPPHSSLLSSLG*PHVHLWPTQLA
Trigger: TGCAAGCTGTGTTGGCCATAGATGGACATGAGGTCATCCTAGAGAAGATAGAAGACTGGAATGTGGTGGAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374111.8
ENST00000374112.7
ENST00000374113.3
ENST00000535836.1
CDS TCA 72 bp TCCAGGCATGATACACTGATCATTTCAACTAGAAATTaGGGGACTCCTCAGAGGAGGCAAATTGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRHDTLIISTRN*GTPQRRQIAGW
Trigger: CCAGCCAGCAATTTGCCTCCTCTGAGGAGTCCCTCAATTTCTAGTTGAAATGATCAGTGTATCATGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS CCA 72 bp GTGAGCTTGCCGAACTCCAAGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTCACCATGAGTTCCACC +
Preference number: 6 (lower is better)
Translates to: VSLPNSKSLMLQ*KMTSSFTMSST
Trigger: GGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CCA 72 bp GATCCAATCTGGGCCAATACAGTACAAGTCAGGTCCTaGGTCTTTTGTGGGAACTGTTGCAAAGGAGAAACT +
Preference number: 6 (lower is better)
Translates to: DPIWANTVQVRS*VFCGNCCKGET
Trigger: AGTTTCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGACCTGACTTGTACTGTATTGGCCCAGATTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 72 bp CTTGGGGTGAGCTTGCCGAACTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCTTCATTCACCATGAGT +
Preference number: 6 (lower is better)
Translates to: LGVSLPNSKSLM*QWKMTSSFTMS
Trigger: ACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGCAAGCTCACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 72 bp CTGGGCCAATACAGTACAAGTCAGGTCCTGGGTCTTTaGTGGGAACTGTTGCAAAGGAGAAACTTTCATCCT +
Preference number: 6 (lower is better)
Translates to: LGQYSTSQVLGL*WELLQRRNFHP
Trigger: AGGATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGACCTGACTTGTACTGTATTGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CCA 72 bp AAGGGCTTACCGAACTCCAAGTCCTTAATGTTGCAGTaGAAGATGACTTCTTCATTCACCATGAGTTCCACC +
Preference number: 6 (lower is better)
Translates to: KGLPNSKSLMLQ*KMTSSFTMSST
Trigger: GGTGGAACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGTAAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS CCA 72 bp GGCCAATACAGTACAAGTCAGGTCCTGGGTCTTTTGTaGGAACTGTTGCAAAGGAGAAACTTTCATCCTACA +
Preference number: 6 (lower is better)
Translates to: GQYSTSQVLGLL*ELLQRRNFHPT
Trigger: TGTAGGATGAAAGTTTCTCCTTTGCAACAGTTCCCACAAAAGACCCAGGACCTGACTTGTACTGTATTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CCA 72 bp CCTGGCCAACCCAGGTCACAAAGATTGGTTTGGAAATaGATACATGATCCAATCTGGGCCAATACAGTACAA +
Preference number: 6 (lower is better)
Translates to: PGQPRSQRLVWK*IHDPIWANTVQ
Trigger: TTGTACTGTATTGGCCCAGATTGGATCATGTATCCATTTCCAAACCAATCTTTGTGACCTGGGTTGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374112.7
ENST00000535836.1
CDS CAA 72 bp TCGCCAAAGGGCTTACCGAACTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCTTCATTCACCATGAGT +
Preference number: 6 (lower is better)
Translates to: SPKGLPNSKSLM*QWKMTSSFTMS
Trigger: ACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGTAAGCCCTTTGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374113.3
CDS CAA 72 bp AGTTTACCATCGCCTCCGAACTCCAAGTCCTTAATGTaGCAGTGGAAGATGACTTCTTCATTCACCATGAGT +
Preference number: 6 (lower is better)
Translates to: SLPSPPNSKSLM*QWKMTSSFTMS
Trigger: ACTCATGGTGAATGAAGAAGTCATCTTCCACTGCAACATTAAGGACTTGGAGTTCGGAGGCGATGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374111.8