Pregenerated sensors for C10ORF120 (Homo sapiens)
Ensembl gene IDs: ENSG00000183559Ensembl transcript IDs: ENST00000329446.5, ENST00000432000.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCACCAGATCACTGAAGTaGTCTCTCCGTGATATAAAA | + |
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Preference number: 2 (lower is better) Translates to: TLIMIRSCFTHALFPDTLTRSLK*SLRDIK Trigger: TTTTATATCACGGAGAGACCACTTCAGTGATCTGGT...GAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| 3UTR-3UTR TCA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTGAAGTGGTCTCTCCGTaGTATAAAATCCTGATTCAT | + |
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Preference number: 2 (lower is better) Translates to: FNNDKELLYACALSRYSLEVVSP*YKILIH Trigger: ATGAATCAGGATTTTATATCACGGAGAGACCACTTC...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR TCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCCTTGCTGCTATGGTGTaGATGCCACCTAGACGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVLAAMV*MPPRRR Trigger: CCTACGTCTAGGTGGCATTCACACCATAGCAGCAAG...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR TCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCGGCAATCCGTGGGTCTaGTCTGTAGAATTTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVGNPWV*SVEFAP Trigger: TGGAGCAAATTCTACAGATCAGACCCACGGATTGCC...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCCTCTTGGCAACACGTTaGGGCTTGATCCTGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVLLATR*GLILKG Trigger: TCCTTTCAGGATCAAGCCCCAACGTGTTGCCAAGAG...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCCAAAAGCCTTCTTGCTaGTATGGTGTGAATGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVQKPSC*YGVNAT Trigger: GGTGGCATTCACACCATAGCAGCAAGAAGGCTTTTG...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCGAGTTGCTTTACGCATaGGCTCTTTCCAGATACTCT | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVELLYA*ALSRYS Trigger: AGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTC...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCATTCTGCTCTCGTTGTaGCATTTTAAATGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVILLSL*HFKCLQ Trigger: CTGGAGGCATTTAAAATGCCACAACGAGAGCAGAAT...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCCTTTTTATACTCCATTaGTTGTTTGTAGTCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PDTLFFQAVGLDQITEVVLFILH*LFVVRR Trigger: TCTCCGGACTACAAACAAGCAATGGAGTATAAAAAG...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR TCA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTCCATATCCGCAACGGTaGAGCAGAACTCAGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: FNNDKELLYACALSRYSLPYPQR*SRTQIL Trigger: GAGGATCTGAGTTCTGCTTCACCGTTGCGGATATGG...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | ACTTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCAGCCAAAAGCCTTCTTaGTGCTATGGTGTGAATGCC | + |
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Preference number: 4 (lower is better) Translates to: TLIMIRSCFTHALFPDTLSQKPS*CYGVNA Trigger: GGCATTCACACCATAGCAGCAAGAAGGCTTTTGGCT...GAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | ACTTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCCTGATCTGTAGAATTTaGTCCATATCCGCAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: TLIMIRSCFTHALFPDTLLICRI*SISATV Trigger: CACCGTTGCGGATATGGAGCAAATTCTACAGATCAG...GAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTCTGCTATGGTGTGAATaGCACCTAGACGTAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: FNNDKELLYACALSRYSLLLWCE*HLDVGS Trigger: AGATCCTACGTCTAGGTGGCATTCACACCATAGCAG...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTTTGTGGCATTTTAAATaGCTCCAGGGGCGCAATCAC | + |
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Preference number: 4 (lower is better) Translates to: FNNDKELLYACALSRYSLLWHFK*LQGRNH Trigger: GTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAA...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | TTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTCTCATTCTTCCTTTCTTaGACCATTGTGTCACTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LIMIRSCFTHALFPDTLFSFFLS*TIVSLA Trigger: GGCTAGTGACACAATGGTGCAAGAAAGGAAGAATGA...GAAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CCA 90 bp | TTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTCACCAGATCACTGAAGTaGTCTCTCCGTGATATAAAA | + |
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Preference number: 4 (lower is better) Translates to: LIMIRSCFTHALFPDTLFTRSLK*SLRDIK Trigger: TTTTATATCACGGAGAGACCACTTCAGTGATCTGGT...GAAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR GCA 90 bp | TTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTCATAATGATAAGGAGTTaGTTTACGCATGCGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LIMIRSCFTHALFPDTLFIMIRS*FTHALF Trigger: AAAGAGCGCATGCGTAAAGCAACTCCTTATCATTAT...GAAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS CCA 90 bp | CCTCATCCTCTCTATGTGCTTACTGACGTTCACCTGCTCTCGTTGTaGCATTTTAAATGCCTCCAGGGGCGCAATCACCTTTGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PHPLYVLTDVHLLSL*HFKCLQGRNHLCCP Trigger: TGGACAGCAAAGGTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGGTGAACGTCAGTAAGCACATAGAGAGGATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CCA 90 bp | TGCATTCTTCCTCTTGCTTGTAAGCCAAAAGCCTTCTTGCTGCTATaGTGTGAATGCCACCTAGACGTAGGATCTCTTTTTCCAAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: CILPLACKPKAFLLL*CECHLDVGSLFPRG Trigger: CCCCCTTGGAAAAAGAGATCCTACGTCTAGGTGGCATTCACACCATAGCAGCAAGAAGGCTTTTGGCTTACAAGCAAGAGGAAGAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329446.5 ENST00000432000.5 |
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| CDS CCA 90 bp | GGAATTCTGATATGCAGAAAAGATTTCGGTTTGTTAGGCCTGCGATaGACCGTTCCGGTTTCTTTGCGGGGAGGAATGATTTGCGATCAT | + |
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Preference number: 5 (lower is better) Translates to: GILICRKDFGLLGLR*TVPVSLRGGMICDH Trigger: ATGATCGCAAATCATTCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCCTAACAAACCGAAATCTTTTCTGCATATCAGAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS-3UTR CAA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCTTTATACTCCATTGCTaGTTTGTAGTCCGGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: PDTLFFQAVGLDQITEVVFILHC*FVVRRQ Trigger: CTGTCTCCGGACTACAAACAAGCAATGGAGTATAAA...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS TCA 90 bp | ACTCCATTGCTTGTTTGTAGTCCGGAGACAGCAACTGTAGTTCCTTaGGCATTCTGCATTCTTCCTCTTGCTTGTAAGCCAAAAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TPLLVCSPETATVVP*AFCILPLACKPKAF Trigger: GAAGGCTTTTGGCTTACAAGCAAGAGGAAGAATGCAGAATGCTCAAGGAACTACAGTTGCTGTCTCCGGACTACAAACAAGCAATGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329446.5 ENST00000432000.5 |
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| CDS-3UTR CAA 90 bp | ACTTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCCCTCTTGGCAACACGTaGGGGCTTGATCCTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: TLIMIRSCFTHALFPDTLPLGNT*GLDPER Trigger: CCTTTCAGGATCAAGCCCCAACGTGTTGCCAAGAGG...GAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CAA 90 bp | CCAGATACTCTCTTCTTCCAGGCTGTAGGTCTTGACCAGATCACTGAAGTGGTCAATAATGATAAGGAGTaGCTTTACGCATGCGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: PDTLFFQAVGLDQITEVVNNDKE*LYACAL Trigger: AAGAGCGCATGCGTAAAGCAACTCCTTATCATTATT...GACCACTTCAGTGATCTGGTCAAGACCTACAGCCTGGAAGAAGAGAGTATCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CAA 90 bp | ACTTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCAGAACTCAGATCCTCTaGGCAACACGTTGGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: TLIMIRSCFTHALFPDTLRTQIL*ATRWGL Trigger: CAAGCCCCAACGTGTTGCCAAGAGGATCTGAGTTCT...GAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS TCA 90 bp | GTCTTGACCAGATCACTGAAGTGGTCTCTCCGTGATATAAAATCCTaGTTCATTAGCATTAAGTCACCAGGGAATTCTGCTCTCGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: VLTRSLKWSLRDIKS*FISIKSPGNSALVV Trigger: CACAACGAGAGCAGAATTCCCTGGTGACTTAATGCTAATGAATCAGGATTTTATATCACGGAGAGACCACTTCAGTGATCTGGTCAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CAA 90 bp | TTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTCGCAACACGTTGGGGCTaGATCCTGAAAGGAAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: LIMIRSCFTHALFPDTLFATRWG*ILKGRV Trigger: AACTCTTCCTTTCAGGATCAAGCCCCAACGTGTTGC...GAAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS TCA 90 bp | GTCTTGACCAGATCACTGAAGTGGTCTCTCCGTGATATAAAATCCTaGTTCATTAGCATTAAGTCACCAGGGAATTCTGATATGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: VLTRSLKWSLRDIKS*FISIKSPGNSDMQK Trigger: TTTCTGCATATCAGAATTCCCTGGTGACTTAATGCTAATGAATCAGGATTTTATATCACGGAGAGACCACTTCAGTGATCTGGTCAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS-3UTR CAA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTTCTGCATTCTTCCTCTaGCTTGTAAGCCAAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: FNNDKELLYACALSRYSLSAFFL*LVSQKP Trigger: AGGCTTTTGGCTTACAAGCAAGAGGAAGAATGCAGA...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CAA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTAGCAACTGTAGTTCCTaGAGCATTCTGCATTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FNNDKELLYACALSRYSLSNCSS*SILHSS Trigger: GGAAGAATGCAGAATGCTCAAGGAACTACAGTTGCT...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS-3UTR CAA 90 bp | TTTAATAATGATAAGGAGTTGCTTTACGCATGCGCTCTTTCCAGATACTCTCTTTCTTTTTATACTCCATaGCTTGTTTGTAGTCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: FNNDKELLYACALSRYSLSFYTP*LVCSPE Trigger: CTCCGGACTACAAACAAGCAATGGAGTATAAAAAGA...AAGAGAGTATCTGGAAAGAGCGCATGCGTAAAGCAACTCCTTATCATTATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS GCA 72 bp | TTTCCCAGAGCCCGAGCAAGCCTCATCCTCTCTATGTaGTTACTGACGTTCACCTGCTCTCGTTGTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: FPRARASLILSM*LLTFTCSRCGI Trigger: AATGCCACAACGAGAGCAGGTGAACGTCAGTAAGCACATAGAGAGGATGAGGCTTGCTCGGGCTCTGGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CAA 72 bp | CCTCTCTATGTGCTTACTGACGTTCACCTGCTCTCGTaGTGGCATTTTAAATGCCTCCAGGGGCGCAATCAC | + |
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Preference number: 6 (lower is better) Translates to: PLYVLTDVHLLS*WHFKCLQGRNH Trigger: GTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGGTGAACGTCAGTAAGCACATAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CAA 72 bp | GGTTTGTTAGGCCTGCGATGGACCGTTCCGGTTTCTTaGCGGGGAGGAATGATTTGCGATCATTTCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: GLLGLRWTVPVS*RGGMICDHFHG Trigger: ACCATGGAAATGATCGCAAATCATTCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCCTAACAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CAA 90 bp | AAGCCTCATCCTCTCTATGTGCTTACTGACGTTCACCTGCTCTCGTaGTGGCATTTTAAATGCCTCCAGGGGCGCAATCACCTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KPHPLYVLTDVHLLS*WHFKCLQGRNHLCC Trigger: ACAGCAAAGGTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGGTGAACGTCAGTAAGCACATAGAGAGGATGAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS GCA 72 bp | ACTGACGTTCACCTGCTCTCGTTGTGGCATTTTAAATaGCTCCAGGGGCGCAATCACCTTTGCTGTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: TDVHLLSLWHFK*LQGRNHLCCPY Trigger: ATATGGACAGCAAAGGTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGGTGAACGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS GCA 72 bp | CACCAGGGAATTCTGCTCTCGTTGTGGCATTTTAAATaGCTCCAGGGGCGCAATCACCTTTGCTGTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: HQGILLSLWHFK*LQGRNHLCCPY Trigger: ATATGGACAGCAAAGGTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGAATTCCCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432000.5 |
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| CDS CCA 72 bp | CTCTATGTGCTTACTGACGTTCACCTGCTCTCGTTGTaGCATTTTAAATGCCTCCAGGGGCGCAATCACCTT | + |
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Preference number: 6 (lower is better) Translates to: LYVLTDVHLLSL*HFKCLQGRNHL Trigger: AAGGTGATTGCGCCCCTGGAGGCATTTAAAATGCCACAACGAGAGCAGGTGAACGTCAGTAAGCACATAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CAA 90 bp | AATTATGGGTGTCATAGTTGTCTTCCTTTCGTCTGGCCTTATTTTTaGCCATTGGACCCAGGCCCACCCCAGACAGAAATGAGGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: NYGCHSCLPFVWPYF*PLDPGPPQTEMRSV Trigger: CACGCTCCTCATTTCTGTCTGGGGTGGGCCTGGGTCCAATGGCAAAAAATAAGGCCAGACGAAAGGAAGACAACTATGACACCCATAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CAA 90 bp | GCATTAAGTCACCAGGGAATTCTGATATGCAGAAAAGATTTCGGTTaGTTAGGCCTGCGATGGACCGTTCCGGTTTCTTTGCGGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ALSHQGILICRKDFG*LGLRWTVPVSLRGG Trigger: TCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCCTAACAAACCGAAATCTTTTCTGCATATCAGAATTCCCTGGTGACTTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS GCA 72 bp | TGTAAGCCAAAAGCCTTCTTGCTGCTATGGTGTGAATaGCACCTAGACGTAGGATCTCTTTTTCCAAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: CKPKAFLLLWCE*HLDVGSLFPRG Trigger: CCCCCTTGGAAAAAGAGATCCTACGTCTAGGTGGCATTCACACCATAGCAGCAAGAAGGCTTTTGGCTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329446.5 ENST00000432000.5 |
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| CDS CAA 72 bp | TGTCATAGTTGTCTTCCTTTCGTCTGGCCTTATTTTTaGCCATTGGACCCAGGCCCACCCCAGACAGAAATG | + |
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Preference number: 6 (lower is better) Translates to: CHSCLPFVWPYF*PLDPGPPQTEM Trigger: CATTTCTGTCTGGGGTGGGCCTGGGTCCAATGGCAAAAAATAAGGCCAGACGAAAGGAAGACAACTATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CCA 72 bp | ATATGCAGAAAAGATTTCGGTTTGTTAGGCCTGCGATaGACCGTTCCGGTTTCTTTGCGGGGAGGAATGATT | + |
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Preference number: 6 (lower is better) Translates to: ICRKDFGLLGLR*TVPVSLRGGMI Trigger: AATCATTCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCCTAACAAACCGAAATCTTTTCTGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS CAA 90 bp | AAAGATTTCGGTTTGTTAGGCCTGCGATGGACCGTTCCGGTTTCTTaGCGGGGAGGAATGATTTGCGATCATTTCCATGGTATGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: KDFGLLGLRWTVPVS*RGGMICDHFHGMLN Trigger: GTTTAACATACCATGGAAATGATCGCAAATCATTCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCCTAACAAACCGAAATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329446.5 |
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| CDS TCA 72 bp | CTTGTTTGTAGTCCGGAGACAGCAACTGTAGTTCCTTaGGCATTCTGCATTCTTCCTCTTGCTTGTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVCSPETATVVP*AFCILPLACKP Trigger: TGGCTTACAAGCAAGAGGAAGAATGCAGAATGCTCAAGGAACTACAGTTGCTGTCTCCGGACTACAAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329446.5 ENST00000432000.5 |
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| CDS CAA 72 bp | AGCAGAACTCAGATCCTCTTGGCAACACGTTGGGGCTaGATCCTGAAAGGAAGAGTTGGTATTAAATATTCT | + |
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Preference number: 6 (lower is better) Translates to: SRTQILLATRWG*ILKGRVGIKYS Trigger: AGAATATTTAATACCAACTCTTCCTTTCAGGATCAAGCCCCAACGTGTTGCCAAGAGGATCTGAGTTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329446.5 ENST00000432000.5 |
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