RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BZW2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136261

Ensembl transcript IDs: ENST00000258761.8, ENST00000405202.5, ENST00000407633.1, ENST00000415365.5, ENST00000430000.1, ENST00000432311.5, ENST00000433922.6, ENST00000436868.5, ENST00000437745.5, ENST00000438834.5, ENST00000446596.5, ENST00000452975.6, ENST00000480517.5, ENST00000630952.2

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCTTGGGAGCTaGACACGGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAG +
Preference number: 1 (lower is better)
Translates to: PEPSGGGSALTGLGS*TRPAGEHIASGASE
Trigger: CTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR TCA 90 bp GTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTaGCTGGCCTTGGGAGCTGAACACGGCCAGCAGGGGAGCATATTG +
Preference number: 1 (lower is better)
Translates to: VVVAVFLNLLEEDQL*LALGAEHGQQGSIL
Trigger: CAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR GCA 90 bp GGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTAT +
Preference number: 1 (lower is better)
Translates to: GQQGSILLQVLQSLL*NKFFLLVPLNSVHY
Trigger: ATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR GCA 90 bp CAGGGACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTT +
Preference number: 1 (lower is better)
Translates to: QGLLDSEEVGKLLKT*VSEVFSKMIHTLSV
Trigger: AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR GCA 90 bp TTTCTTCATCTGGTCAAGAAAAACACTTTTGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAGTATTGCTTCTTCGCTCAGAACATC +
Preference number: 1 (lower is better)
Translates to: FLHLVKKNTFAFSNM*FLIPFQYCFFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGCAAAAGTGTTTTTCTTGACCAGATGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 2 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp TGGGAGCTGAACACGGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAGCCCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 2 (lower is better)
Translates to: WELNTASRGAYCFRCFRAPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...GGCTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp TGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: CCRSSIPEPSGGGSALTGLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...GCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 2 (lower is better)
Translates to: DCWTRRKSESSLRPASVKNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 2 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 2 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp TGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 2 (lower is better)
Translates to: CCRSSIPEPSGGGSALTGRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...GCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 2 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACATGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 2 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp TGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 2 (lower is better)
Translates to: CNKFFLLVPLNSVHYTCPLVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...TGGACATGTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGCTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 2 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp AACCTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 2 (lower is better)
Translates to: NLGIVLVEPFNFPHLPIRVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...CCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATCTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 2 (lower is better)
Translates to: VCQITYMSRYTTTKVACNLVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 2 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACATTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 2 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTLAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR TCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVELIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp AACCTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NLGIVLVEPFNFPHLPIRLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...CCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAATCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 2 (lower is better)
Translates to: TKVACNRHQWGGHHTVPESSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp CGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCTTGGGGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: RSSIPEPSGGGSALTGLGVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...CCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 2 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTTQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp TTCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACAGAAGACCAATCACTTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 2 (lower is better)
Translates to: FLFHSTAFIIHVHRRPITSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...AGTGATTGGTCTTCTGTGGACATGTATAATGAACGCTGTTGAGTGGAACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAACCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 2 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR TCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: TKVACNRHQWGGHHTVPENFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp GGATGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 2 (lower is better)
Translates to: GCCRSSIPEPSGGGSALTKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...AGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 2 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 2 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRIRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp CCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 2 (lower is better)
Translates to: PALQQVLPSCSTQQRSLYNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...GTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 2 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR TCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAGCTTGACAGCAAATaGGGCCGCAATGCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: RGRVPSIIADASGLHLKTKLDSK*GRNAFF
Trigger: AAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436868.5
3UTR-3UTR GCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 2 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVENHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRIAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAATCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 2 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 2 (lower is better)
Translates to: KEESVEYLISDLLDSLLNRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR GCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 2 (lower is better)
Translates to: VCQITYMSRYTTTKVACNNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 2 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR TCA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 2 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATTGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 2 (lower is better)
Translates to: KEESVEYLISDLLDSLLNCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR TCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 2 (lower is better)
Translates to: KEESVEYLISDLLDSLLNPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR TCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGNFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR GCA 90 bp ACAGAAGACCAATCACTGCTGTTTCTGGAAGATCATTCCTCTTCATTTCTTCTTAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 2 (lower is better)
Translates to: TEDQSLLFLEDHSSSFLLKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...AAGAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp TTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGCATTACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 2 (lower is better)
Translates to: LLSHLIFLTFRFGFFFCITQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...AATGCAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 2 (lower is better)
Translates to: VPSIIADASGLHLKTKQKASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000436868.5
3UTR-3UTR TCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: KLVCQITYMSRYTTTKVANFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: VPSIIADASGLHLKTKQKTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: VCQITYMSRYTTTKVACNVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: VPSIIADASGLHLKTKQKVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR TCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: KEESVEYLISDLLDSLLNNFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR GCA 72 bp AGCTCCTTCTGCAGTTCCTTCCTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGA +
Preference number: 3 (lower is better)
Translates to: SSFCSSFLVPRD*WTRRKSESSLR
Trigger: TCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGAAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 3 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CAA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436868.5
3UTR CCA 72 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTaGGGCGGTCACCACACAGTACCTGAAAAATACAGC +
Preference number: 3 (lower is better)
Translates to: YTTTKVACNRHQ*GGHHTVPEKYS
Trigger: GCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 3 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACACTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 3 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR GCA 72 bp CTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGCAAAATGATCCACACT +
Preference number: 3 (lower is better)
Translates to: LDSEEVGKLLKT*VSEVFSKMIHT
Trigger: AGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 3 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAACTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 3 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 3 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CAA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436868.5
3UTR-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTCTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 3 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGCTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 3 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp CCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 3 (lower is better)
Translates to: PALQQVLPSCSTQQRSLYDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...GTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CAA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 3 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR TCA 72 bp TCCTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATaGTCCACACTCTGTCTGTTAACTGGAAAGAGTTCA +
Preference number: 3 (lower is better)
Translates to: SLRPASVKYLAK*STLCLLTGKSS
Trigger: TGAACTCTTTCCAGTTAACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR-3UTR CAA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 3 (lower is better)
Translates to: KLVCQITYMSRYTTTKVADLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
3UTR-3UTR CAA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 3 (lower is better)
Translates to: VCQITYMSRYTTTKVACNDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTGCGDS*SSSGSS
Trigger: GCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCC...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYRKAGG*GDSCSS
Trigger: GCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCG...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTG +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEDDAQG*GLRRFV
Trigger: CACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTC...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTG +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYDDAQG*GLRRFV
Trigger: CACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTC...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTG +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHDDAQG*GLRRFV
Trigger: CACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTC...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp TGGGAGCTGAACACGGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAGCCTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WELNTASRGAYCFRCFRALIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...GGCTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCGGGCAGGGTGCCATTaGCCAGCAGAATCCCCGACA +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYRAGCH*PAESPT
Trigger: TGTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCG...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CCA 90 bp TGGGAGCTGAACACGGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAGCCAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: WELNTASRGAYCFRCFRARISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...GGCTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCGGGCAGGGTGCCATTaGCCAGCAGAATCCCCGACA +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHRAGCH*PAESPT
Trigger: TGTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCG...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR GCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACACGGGCAGGGTGCCATTaGCCAGCAGAATCCCCGACA +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTRAGCH*PAESPT
Trigger: TGTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCG...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTATTTCTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LDSEEVGKLLKTCVSEVFLVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...AAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAATTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPELIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAACAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACATTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPGCGDS*SSSGSS
Trigger: GCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCC...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp TCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACAGAAGACCAATCACTGGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCSTQQRSLYMSTEDQSLGCGDS*SSSGSS
Trigger: GCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCC...CAGTGATTGGTCTTCTGTGGACATGTATAATGAACGCTGTTGAGTGGAACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLRKAGG*GDSCSS
Trigger: GCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCG...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVERKAGG*GDSCSS
Trigger: GCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCG...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGRKAGG*GDSCSS
Trigger: GCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCG...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACTGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp CGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCTTGGGAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSSIPEPSGGGSALTGLGRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...CCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTG +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGDDAQG*GLRRFV
Trigger: CACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTC...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKASLSP*TSVSLK
Trigger: CTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGC...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp TGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCCCTTTTCCGAGTTTTaGACCGCTGGCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: CCRSSIPEPSGGGSALTGPFSEF*TAGLLA
Trigger: TGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGG...GCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACCCTTTTCCGAGTTTTaGACCGCTGGCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTPFSEF*TAGLLA
Trigger: TGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGG...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGAAGCTTGACAGCAAATaGGGCCGCAATGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKKLDSK*GRNAFF
Trigger: AAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436868.5
CDS-3UTR TCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp TGGGAGCTGAACACGGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAGCCTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: WELNTASRGAYCFRCFRALAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...GGCTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGGAAGGACAGACACATTaGCATAGACACACGGAACCC +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQEGQTH*HRHTEP
Trigger: GGGTTCCGTGTGTCTATGTCAATGTGTCTGTCCTTC...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433922.6
ENST00000630952.2
CDS-3UTR GCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVGCGDS*SSSGSS
Trigger: GCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCC...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVGCGDS*SSSGSS
Trigger: GCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVRKAGG*GDSCSS
Trigger: GCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCG...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GGATGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTCAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: GCCRSSIPEPSGGGSALTQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...AGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACATGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACTGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACATGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTG +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVDDAQG*GLRRFV
Trigger: CACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACGAGTTTTGAACCGCTaGCCTGTTAGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTRVLNR*PVSTGF
Trigger: GAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCG...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACACGAGTTTTGAACCGCTaGCCTGTTAGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTRVLNR*PVSTGF
Trigger: GAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCG...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAAAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRKSESSLRPASVKYLAKSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...TTTTGCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: GASEPALQQVLPSCSTQQRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCAGTGGCGGCAGACAATaGAGGAGTGAAGGACAGACA +
Preference number: 4 (lower is better)
Translates to: CCRSSIPEPSGGGSALTGSGGRQ*RSEGQT
Trigger: TGTCTGTCCTTCACTCCTCCATTGTCTGCCGCCACT...GCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCGGACAAGTGTATCCCTaGAGACTGTGGGTTCGAATT +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTGQVYP*RLWVRI
Trigger: AATTCGAACCCACAGTCTTCAGGGATACACTTGTCC...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCACGGGCAGGGTGCCATTaGCCAGCAGAATCCCCGACA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPRAGCH*PAESPT
Trigger: TGTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCG...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACACTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTLVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCACTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPLVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGAGTTTTGAACCGCTaGCCTGTTAGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GASEPALQQVLPSCSTQQRVLNR*PVSTGF
Trigger: GAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCG...CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCTGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 4 (lower is better)
Translates to: CCRSSIPEPSGGGSALTGCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...GCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACACAGACAATGGAGGAGTaGAGGACAGACACATTGACA +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTQTMEE*RTDTLT
Trigger: TGTCAATGTGTCTGTCCTTCACTCCTCCATTGTCTG...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433922.6
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAAAGCTTGACAGCAAATaGGGCCGCAATGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTKLDSK*GRNAFF
Trigger: GAAAAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVLVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTGGTGCCCAGGGACTaGTGGACTCGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRILVPRD*WTRRKS
Trigger: CGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAG...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCACAGCAGCAGCAGCAGTaGCGGCAGACAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPQQQQQ*RQTMEE
Trigger: CTCCTCCATTGTCTGCCGCCACTGCTGCTGCTGCTG...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCAGCAGCAGCAGCAGTaGCGGCAGACAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEQQQQQ*RQTMEE
Trigger: CTCCTCCATTGTCTGCCGCCACTGCTGCTGCTGCTG...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGAAAACACACAGTGGTTaGTCATCTTGGTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKKTHSG*SSWSCH
Trigger: GTGACAAGACCAAGATGACCAACCACTGTGTGTTTT...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVESSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TGGGAGCTGAACACGGCCAGCAGGGGAGCATATTGCTTCAGGTGCTTCAGAGCCGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: WELNTASRGAYCFRCFRAVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...GGCTCTGAAGCACCTGAAGCAATATGCTCCCCTGCTGGCCGTGTTCAGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp CGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCTTGGGTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RSSIPEPSGGGSALTGLGSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...CCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQLAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNRKAGG*GDSCSS
Trigger: GCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCG...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACCAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: PALQQVLPSCSTQQRSLYQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...GTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACACTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RCFRACSATSSSFLFHSTAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...TGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTATTTAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 4 (lower is better)
Translates to: LDSEEVGKLLKTCVSEVFNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...AAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCAGCAGCAGCAGCAGTaGCGGCAGACAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVQQQQQ*RQTMEE
Trigger: CTCCTCCATTGTCTGCCGCCACTGCTGCTGCTGCTG...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACAGCAGCAGCAGCAGTaGCGGCAGACAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CNKFFLLVPLNSVHYTCPQQQQQ*RQTMEE
Trigger: CTCCTCCATTGTCTGCCGCCACTGCTGCTGCTGCTG...TGGACATGTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AGGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RCFRACSATSSSFLFHSTASLSP*TSVSLK
Trigger: CTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGC...TGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQSGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVAVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCATCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVESAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPETQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCATTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHLAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKNFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGCAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACACAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTCAGGGGCAAGCATACTaGCAGCCACCAGGATATCGA +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGQGQAY*QPPGYR
Trigger: TCGATATCCTGGTGGCTGGCAGTATGCTTGCCCCTG...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp GGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGATCGCCAACTTTGTCTaGTCTGTTTCGGAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GASEPALQQVLPSCSTQQIANFV*SVSEKA
Trigger: AGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCGAT...CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436868.5
CDS-3UTR GCA 90 bp TGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: CCRSSIPEPSGGGSALTGKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...GCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTATTTCTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LDSEEVGKLLKTCVSEVFLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...AAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: DCWTRRKSESSLRPASVKIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAACAAATGAGGCCGCAATaGCTTTTTCATTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEQMRPQ*LFHFIF
Trigger: GAAGATGAAATGAAAAAGGCATTGCGGCCTCATTTG...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATCAGCAGCAGCAGCAGTaGCGGCAGACAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VCQITYMSRYTTTKVACNQQQQQ*RQTMEE
Trigger: CTCCTCCATTGTCTGCCGCCACTGCTGCTGCTGCTG...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHSGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: GASEPALQQVLPSCSTQQASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ACAGAAGACCAATCACTGCTGTTTCTGGAAGATCATTCCTCTTCATTTCTTCTTGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: TEDQSLLFLEDHSSSFLLVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...AAGAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTTTCTGCAGTTCCTTCCTaGTGCCCAGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKTCVSEVFSKMIHTLSVSAVPS*CPGTAG
Trigger: TCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGA...AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ACAGAAGACCAATCACTGCTGTTTCTGGAAGATCATTCCTCTTCATTTCTTCTTAGCTCTGACTGGCCTTaGGAGCTGAACACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEDQSLLFLEDHSSSFLLSSDWP*ELNTAS
Trigger: GCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCT...AAGAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAAAGCTTGACAGCAAATaGGGCCGCAATGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKKLDSK*GRNAFF
Trigger: AAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR TCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRILIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTAAGCTTGACAGCAAATaGGGCCGCAATGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGKLDSK*GRNASF
Trigger: GAAGGAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407633.1
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACATGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGTGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLCHHHL*AFLQGQ
Trigger: TTGCCCCTGGAGGAACGCGCATAGATGATGGTGACA...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATCGGGCAGGGTGCCATTaGCCAGCAGAATCCCCGACA +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNRAGCH*PAESPT
Trigger: TGTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCG...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR GCA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCGAGTTTTGAACCGCTaGCCTGTTAGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVERVLNR*PVSTGF
Trigger: GAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCG...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 4 (lower is better)
Translates to: GASEPALQQVLPSCSTQQTQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAAGTGGCGGCAGACAATaGAGGAGTGAAGGACAGACA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPSGGRQ*RSEGQT
Trigger: TGTCTGTCCTTCACTCCTCCATTGTCTGCCGCCACT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433922.6
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AACCTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGAGTGGCGGCAGACAATaGAGGAGTGAAGGACAGACA +
Preference number: 4 (lower is better)
Translates to: NLGIVLVEPFNFPHLPIRSGGRQ*RSEGQT
Trigger: TGTCTGTCCTTCACTCCTCCATTGTCTGCCGCCACT...CCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTNFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAGGTGCTTCAGAGCCTaGTCTGCAACAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTRCFRA*SATSSS
Trigger: GGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCGAGTTTTGAACCGCTaGCCTGTTAGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVRVLNR*PVSTGF
Trigger: GAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCG...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTASLSP*TSVSLK
Trigger: CTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGC...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEASLSP*TSVSLK
Trigger: CTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGC...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATGTGCCCAGGGACTGCTaGACTCGGAGGAAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNVPRDC*TRRKSE
Trigger: TTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCAC...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCATGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 4 (lower is better)
Translates to: RCFRACSATSSSFLFHSTTQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...TGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
3UTR CAA 72 bp GTAACAGAGTTGGCATCTTTTTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAATGAGGCCGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: VTELASFSAIHA*KSLTANEAAMP
Trigger: AGGCATTGCGGCCTCATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436868.5
CDS-3UTR TCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATCCCTTTTCCGAGTTTTaGACCGCTGGCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: VCQITYMSRYTTTKVACNPFSEF*TAGLLA
Trigger: TGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGG...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAGGACAAGTGTATCCCTaGAGACTGTGGGTTCGAATT +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTGQVYP*RLWVRI
Trigger: AATTCGAACCCACAGTCTTCAGGGATACACTTGTCC...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGGGACAAGTGTATCCCTaGAGACTGTGGGTTCGAATT +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEGQVYP*RLWVRI
Trigger: AATTCGAACCCACAGTCTTCAGGGATACACTTGTCC...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTATTTTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LDSEEVGKLLKTCVSEVFFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...AAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTAAGCTTGACAGCAAATaGGGCCGCAATGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGKLDSK*GRNAFF
Trigger: AAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR TCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAATTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTAAAGCACCACCTCCTTaGTCGGGCATTCCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRIKAPPP*SGIPEK
Trigger: TTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTT...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTNHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVAASLSP*TSVSLK
Trigger: CTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGC...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVASLSP*TSVSLK
Trigger: CTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGC...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAAGGATCAGCTCTGACTaGCCTTGGGAGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKRISSD*PWELNT
Trigger: CGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACAGAAGACCAATCACTTGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 4 (lower is better)
Translates to: FLFHSTAFIIHVHRRPITCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...AGTGATTGGTCTTCTGTGGACATGTATAATGAACGCTGTTGAGTGGAACAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAACCCTTTTCCGAGTTTTaGACCGCTGGCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKPFSEF*TAGLLA
Trigger: TGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGG...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGGACAAGTGTATCCCTaGAGACTGTGGGTTCGAATT +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVGQVYP*RLWVRI
Trigger: AATTCGAACCCACAGTCTTCAGGGATACACTTGTCC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTTGGACAAGTGTATCCCTaGAGACTGTGGGTTCGAATT +
Preference number: 4 (lower is better)
Translates to: LKTCVSEVFSKMIHTLSVGQVYP*RLWVRI
Trigger: AATTCGAACCCACAGTCTTCAGGGATACACTTGTCC...AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTAAGCTTGACAGCAAATaGGGCCGCAATGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVKLDSK*GRNAFF
Trigger: AAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR TCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATTTGATCGGGCATTCCTaGGAAAGACGCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNLIGHS*ERRSWS
Trigger: GCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAA...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 4 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRIPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp TTCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACAGAAGACCAATCACTCAGACAATGGAGGAGTaGAGGACAGACACATTGACA +
Preference number: 4 (lower is better)
Translates to: FLFHSTAFIIHVHRRPITQTMEE*RTDTLT
Trigger: TGTCAATGTGTCTGTCCTTCACTCCTCCATTGTCTG...AGTGATTGGTCTTCTGTGGACATGTATAATGAACGCTGTTGAGTGGAACAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGATCGCCAACTTTGTCTaGTCTGTTTCGGAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLIANFV*SVSEKA
Trigger: AGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCGAT...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR GCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTCTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCACTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACACTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAAGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCAACCATTTCTCCCTCTaGACAAGGGAAGCCTATCCT +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVANHFSL*TREAYP
Trigger: AGGATAGGCTTCCCTTGTGCAGAGGGAGAAATGGTT...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAACGAGTTTTGAACCGCTaGCCTGTTAGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKRVLNR*PVSTGF
Trigger: GAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCG...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATTGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 4 (lower is better)
Translates to: VCQITYMSRYTTTKVACNCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATCCCTTTTCCGAGTTTTaGACCGCTGGCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNPFSEF*TAGLLA
Trigger: TGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGG...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAATTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ACAGAAGACCAATCACTGCTGTTTCTGGAAGATCATTCCTCTTCATTTCTTCTTCCCAAGTATAATAGCTaGTGCCTCAGGGCTCCATTT +
Preference number: 4 (lower is better)
Translates to: TEDQSLLFLEDHSSSFLLPKYNS*CLRAPF
Trigger: AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGG...AAGAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVELAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAGAAGGACAGACACATTaGCATAGACACACGGAACCC +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKEGQTH*HRHTEP
Trigger: GGGTTCCGTGTGTCTATGTCAATGTGTCTGTCCTTC...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433922.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ACAGAAGACCAATCACTGCTGTTTCTGGAAGATCATTCCTCTTCATTTCTTCTTCAGACAATGGAGGAGTaGAGGACAGACACATTGACA +
Preference number: 4 (lower is better)
Translates to: TEDQSLLFLEDHSSSFLLQTMEE*RTDTLT
Trigger: TGTCAATGTGTCTGTCCTTCACTCCTCCATTGTCTG...AAGAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGATCGCCAACTTTGTCTaGTCTGTTTCGGAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVIANFV*SVSEKA
Trigger: AGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCGAT...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR GCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTCTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPSGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVESGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAAACACACAGTGGTTaGTCATCTTGGTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTKTHSG*SSWSCH
Trigger: GTGACAAGACCAAGATGACCAACCACTGTGTGTTTT...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGAAAACACACAGTGGTTaGTCATCTTGGTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLKTHSG*SSWSCH
Trigger: GTGACAAGACCAAGATGACCAACCACTGTGTGTTTT...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp TGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACATGTCCAGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CNKFFLLVPLNSVHYTCPAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...TGGACATGTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGCCTCTTGTCTAAGTTaGCTTTTCTCAAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVASCLS*LFSKTR
Trigger: CCTCGTCTTTGAGAAAAGCCAACTTAGACAAGAGGC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVETLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAATGTAATAGACACCAGTaGGGCGGTCACCACACAGTA +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKCNRHQ*GGHHTV
Trigger: TACTGTGTGGTGACCGCCCCACTGGTGTCTATTACA...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGTQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PALQQVLPSCSTQQRSLYFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...GTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAAAGCTTGACAGCAAATaGGGCCGCAATGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKKLDSK*GRNAFF
Trigger: AAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR TCA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVLAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp CTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTTTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LKTCVSEVFSKMIHTLSVLAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATATCGCCAACTTTGTCTaGTCTGTTTCGGAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VCQITYMSRYTTTKVACNIANFV*SVSEKA
Trigger: AGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCGAT...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR GCA 90 bp CTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: LGIVLVEPFNFPHLPIRIKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...AATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATCTTCAGAGCCTGCTCTaGAACAAGTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VCQITYMSRYTTTKVACNLQSLL*NKFFLL
Trigger: AAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAG...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATGCATATTGCTTCAGGTaGTTCAGAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNAYCFR*FRACSA
Trigger: TGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGC...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AACCTAGGTATTGTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: NLGIVLVEPFNFPHLPIRAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...CCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCACAATACCTAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACACAAATGAGGCCGCAATaGCTTTTTCATTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: RGRVPSIIADASGLHLKTQMRPQ*LFHFIF
Trigger: GAAGATGAAATGAAAAAGGCATTGCGGCCTCATTTG...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVSGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp CTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTTAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: LKTCVSEVFSKMIHTLSVSGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTA +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVSGWSS*SCHHHL
Trigger: TAGATGATGGTGACAAGACCAAGATGACCAACCACT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTAAAACACACAGTGGTTaGTCATCTTGGTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVKTHSG*SSWSCH
Trigger: GTGACAAGACCAAGATGACCAACCACTGTGTGTTTT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVATQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp TTTCTCAAAGACGAGGTAACAGAGTTGGCATCTTTTTCTGCCATCCATGCTTTGTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: FLKDEVTELASFSAIHALFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...CAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTACCTCGTCTTTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436868.5
CDS-3UTR TCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVSSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTCTTCATTTCTTCTTTaGCATAAAGCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVASSFLL*HKAPPP
Trigger: AGGAGGTGGTGCTTTATGTCAAAGAAGAAATGAAGA...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVENFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGAATTTCAGATCTACTTaGCTCCTTGTTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLNFRST*LLVEWL
Trigger: AAGCCATTCAACAAGGAGTCAAGTAGATCTGAAATT...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGTTTATCCAGTCCAGGTaGCTACTGATTAGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVFIQSR*LLISLS
Trigger: ACTTAGACTAATCAGTAGTCACCTGGACTGGATAAA...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407633.1
CDS-3UTR TCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATAAGCTTGACAGCAAATaGGGCCGCAATGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNKLDSK*GRNAFF
Trigger: GAAAAAGGCATTGCGGCCTCATTTGCTGTCAAGCTT...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp TTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGCATTAAGCTCCTTAAGACCTaGGTCAGTGAAGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: LLSHLIFLTFRFGFFFCIKLLKT*VSEVFS
Trigger: GCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTT...AATGCAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp TCTTGTTCCACTCAACAGCGTTCATTATACATGTCCACAGAAGACCAATCACTGATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: SCSTQQRSLYMSTEDQSLIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...CAGTGATTGGTCTTCTGTGGACATGTATAATGAACGCTGTTGAGTGGAACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR GCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVAAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGCCTTTAGCAACATGTaGTTCCTTATACCATTTCAG +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVAFSNM*FLIPFQ
Trigger: CTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAGCTGAAAACACACAGTaGTTGGTCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VPSIIADASGLHLKTKQKAENTQ*LVILVL
Trigger: CAAGACCAAGATGACCAACCACTGTGTGTTTTCAGC...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVEVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp ACAGAAGACCAATCACTGCTGTTTCTGGAAGATCATTCCTCTTCATTTCTTCTTACACAACTACCAAAGTaGCCTGTAATAGACACCAGT +
Preference number: 4 (lower is better)
Translates to: TEDQSLLFLEDHSSSFLLTQLPK*PVIDTS
Trigger: ACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT...AAGAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR TCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTTTCGGATGGTTTCATaGTCTTCATTTGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVAFRMVS*SSFAEN
Trigger: GTTTTCAGCAAATGAAGATCATGAAACCATCCGAAA...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR GCA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCATACCATTTCAGTATTaGTTCTTCGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: KLVCQITYMSRYTTTKVAIPFQY*FFAQNI
Trigger: GATGTTCTGAGCGAAGAAGCAATACTGAAATGGTAT...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR TCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATTTAGCATATAGTGAGTaGGAGGTAGAGTCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNLAYSE*EVESQV
Trigger: TACTTGGGACTCTACCTCTCACTCACTATATGCTAA...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATAAAACACACAGTGGTTaGTCATCTTGGTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNKTHSG*SSWSCH
Trigger: GTGACAAGACCAAGATGACCAACCACTGTGTGTTTT...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATACTCTGTCTGTTAACTaGAAAGAGTTCAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNTLSVN*KEFKQP
Trigger: AGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGT...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CCA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATGTTTCTCTTCTCAAATaGTTCAGCATTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: KEESVEYLISDLLDSLLNVSLLK*FSIPNQ
Trigger: TTGATTGGGAATGCTGAACCATTTGAGAAGAGAAAC...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS GCA 90 bp GAGGAGGTAGCGACGACGCGCAAGGCTGGGGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTGGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: EEVATTRKAGGCGDS*SSSGSSSSSSSGGR
Trigger: TCTGCCGCCACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000415365.5
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS GCA 90 bp TCTCACCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHLSEEVATTRKAGG*GDSCSSSGSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGGTGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000415365.5
ENST00000432311.5
ENST00000433922.6
ENST00000437745.5
CDS CCA 90 bp GGCTGCTTCTCACCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GCFSPVRGGSDDAQG*GLRRFVQQQRQQQQ
Trigger: CTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGGTGAGAAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415365.5
ENST00000432311.5
ENST00000433922.6
ENST00000437745.5
CDS GCA 90 bp TTTCATCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FHLSEEVATTRKAGG*GDSCSSSGSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGATGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405202.5
CDS GCA 90 bp AAATTTCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KFLSEEVATTRKAGG*GDSCSSSGSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGAAATTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258761.8
ENST00000436868.5
ENST00000630952.2
CDS CCA 90 bp TTCTCTTTTTCATCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FSFSSVRGGSDDAQG*GLRRFVQQQRQQQQ
Trigger: CTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGATGAAAAAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405202.5
CDS CCA 90 bp ATTCATAAAATTTCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: IHKISVRGGSDDAQG*GLRRFVQQQRQQQQ
Trigger: CTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGAAATTTTATGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258761.8
ENST00000436868.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAGCGGGCAGGGTGCCATaGCCCAGCAGAATCCCCGAC +
Preference number: 5 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEAGRVP*PSRIPD
Trigger: GTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCGC...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGCGGGCAGGGTGCCATaGCCCAGCAGAATCCCCGAC +
Preference number: 5 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTAGRVP*PSRIPD
Trigger: GTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCGC...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTGCGGGCAGGGTGCCATaGCCCAGCAGAATCCCCGAC +
Preference number: 5 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGAGRVP*PSRIPD
Trigger: GTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCGC...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACGCCGCAATGCCTTCTTaGACTAAGCTGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYAAMPS*TKLSVK
Trigger: CTTCACCGACAGCTTAGTCAAAGAAGGCATTGCGGC...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGGCCGCAATGCCTTCTTaGACTAAGCTGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQAAMPS*TKLSVK
Trigger: CTTCACCGACAGCTTAGTCAAAGAAGGCATTGCGGC...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACGCCGCAATGCCTTCTTaGACTAAGCTGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHAAMPS*TKLSVK
Trigger: CTTCACCGACAGCTTAGTCAAAGAAGGCATTGCGGC...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGC +
Preference number: 5 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTLVILV*SPSSMR
Trigger: GCGCATAGATGATGGTGACAAGACCAAGATGACCAA...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGC +
Preference number: 5 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYLVILV*SPSSMR
Trigger: GCGCATAGATGATGGTGACAAGACCAAGATGACCAA...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGCATTGCGGGCAGGGTGCCATaGCCCAGCAGAATCCCCGAC +
Preference number: 5 (lower is better)
Translates to: LLSHLIFLTFRFGFFFCIAGRVP*PSRIPD
Trigger: GTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCGC...AATGCAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436868.5
CDS-3UTR CAA 90 bp CGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGGCCTTGGGAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: RSSIPEPSGGGSALTGLGSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...CCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGC +
Preference number: 5 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHLVILV*SPSSMR
Trigger: GCGCATAGATGATGGTGACAAGACCAAGATGACCAA...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACACAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAACAGCATCGCCAACTTaGTCTGCTCTGTTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTTASPT*SALFRK
Trigger: TTTCCGAAACAGAGCAGACAAAGTTGGCGATGCTGT...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: TKVACNRHQWGGHHTVPESSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAATCCCTTTTCCGAGTTTaGAACCGCTGGCCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKSLFRV*NRWPVS
Trigger: GCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGA...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTAGAGTCCAGAAATTaGGCTACAGCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTVESRN*ATASRS
Trigger: TGACCTTGAAGCTGTAGCCAAATTTCTGGACTCTAC...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GGATGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTCAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: GCCRSSIPEPSGGGSALTQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...AGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACATCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATGCGGGCAGGGTGCCATaGCCCAGCAGAATCCCCGAC +
Preference number: 5 (lower is better)
Translates to: KEESVEYLISDLLDSLLNAGRVP*PSRIPD
Trigger: GTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCGC...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACAACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: DTQLPKWPVIDTSGAVTTTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...TGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GGATGTTGTCGTAGCAGTATTCCTGAACCTTCTGGAGGAGGATCAGCTCTGACTGTAGAGTCCAGAAATTaGGCTACAGCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: GCCRSSIPEPSGGGSALTVESRN*ATASRS
Trigger: TGACCTTGAAGCTGTAGCCAAATTTCTGGACTCTAC...AGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGCTACGACAACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GACTGCTGGACTCGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTTTCATGATCTTCATTaGCTGAAAACACACAGTGGT +
Preference number: 5 (lower is better)
Translates to: DCWTRRKSESSLRPASVKFHDLH*LKTHSG
Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...CTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp AGCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: SRYTTTKVACNRHQWGGHSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...GTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GCAGATACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCCTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 5 (lower is better)
Translates to: ADTQLPKWPVIDTSGAVTLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...GGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCATCCCTTTTCCGAGTTTaGAACCGCTGGCCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPSLFRV*NRWPVS
Trigger: GCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGA...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTTCCCTTTTCCGAGTTTaGAACCGCTGGCCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGSLFRV*NRWPVS
Trigger: GCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGA...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CGGAGGAAGTCGGAAAGCTCCTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAACAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: RRKSESSLRPASVKYLAKQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...TTTTGCTAAATACTTCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp AGGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: RCFRACSATSSSFLFHSTENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...TGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTTTCATGATCTTCATTaGCTGAAAACACACAGTGGT +
Preference number: 5 (lower is better)
Translates to: TQLPKWPVIDTSGAVTTQFHDLH*LKTHSG
Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...CTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACTATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: QLPKWPVIDTSGAVTTQYYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...GTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp ACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: TKVACNRHQWGGHHTVPEDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...TTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTCCCTTTTCCGAGTTTaGAACCGCTGGCCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: KLVCQITYMSRYTTTKVASLFRV*NRWPVS
Trigger: GCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGA...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TACACAACTACCAAAGTGGCCTGTAATAGACACCAGTGGGGCGGTCACCACACATTTCATGATCTTCATTaGCTGAAAACACACAGTGGT +
Preference number: 5 (lower is better)
Translates to: YTTTKVACNRHQWGGHHTFHDLH*LKTHSG
Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...TGTGTGGTGACCGCCCCACTGGTGTCTATTACAGGCCACTTTGGTAGTTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGCCGCAATGCCTTCTTaGACTAAGCTGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVAAMPS*TKLSVK
Trigger: CTTCACCGACAGCTTAGTCAAAGAAGGCATTGCGGC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGC +
Preference number: 5 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLLVILV*SPSSMR
Trigger: GCGCATAGATGATGGTGACAAGACCAAGATGACCAA...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGC +
Preference number: 5 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGLVILV*SPSSMR
Trigger: GCGCATAGATGATGGTGACAAGACCAAGATGACCAA...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGC +
Preference number: 5 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVELVILV*SPSSMR
Trigger: GCGCATAGATGATGGTGACAAGACCAAGATGACCAA...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GGTGCTTCAGAGCCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGTTTCATGATCTTCATTaGCTGAAAACACACAGTGGT +
Preference number: 5 (lower is better)
Translates to: GASEPALQQVLPSCSTQQFHDLH*LKTHSG
Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAACAGCATCGCCAACTTaGTCTGCTCTGTTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPTASPT*SALFRK
Trigger: TTTCCGAAACAGAGCAGACAAAGTTGGCGATGCTGT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGACAGCATCGCCAACTTaGTCTGCTCTGTTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVETASPT*SALFRK
Trigger: TTTCCGAAACAGAGCAGACAAAGTTGGCGATGCTGT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp GTAATAGACACCAGTGGGGCGGTCACCACACAGTACCTGAAAAATACAGCTAAATCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: VIDTSGAVTTQYLKNTAKSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...TTTAGCTGTATTTTTCAGGTACTGTGTGGTGACCGCCCCACTGGTGTCTATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CCTGCTCTGCAACAAGTTCTTCCTTCTTGTTCCACTCAACAGCGTTCATTATACAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: PALQQVLPSCSTQQRSLYSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...GTATAATGAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAATCCCTTTTCCGAGTTTaGAACCGCTGGCCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKSLFRV*NRWPVS
Trigger: GCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGA...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTGTAGAGTCCAGAAATTaGGCTACAGCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGVESRN*ATASRS
Trigger: TGACCTTGAAGCTGTAGCCAAATTTCTGGACTCTAC...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVETSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp AAACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCGTAGAGTCCAGAAATTaGGCTACAGCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: KLVCQITYMSRYTTTKVAVESRN*ATASRS
Trigger: TGACCTTGAAGCTGTAGCCAAATTTCTGGACTCTAC...GGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTTGTAGAGTCCAGAAATTaGGCTACAGCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LKTCVSEVFSKMIHTLSVVESRN*ATASRS
Trigger: TGACCTTGAAGCTGTAGCCAAATTTCTGGACTCTAC...AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp AGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: SIPNQKVVCGNLGIVLVESAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...CTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTCTCAAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LLKWFSIPNQKVVCGNLGSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...ACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTTGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAACAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATGAAAACACACAGTGGTaGGTCATCTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: VCQITYMSRYTTTKVACNENTQW*VILVLS
Trigger: TGACAAGACCAAGATGACCAACCACTGTGTGTTTTC...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAACAGCATCGCCAACTTaGTCTGCTCTGTTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKTASPT*SALFRK
Trigger: TTTCCGAAACAGAGCAGACAAAGTTGGCGATGCTGT...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000452975.6
CDS-3UTR CAA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AGAGGTAGAGTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACACTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 5 (lower is better)
Translates to: RGRVPSIIADASGLHLKTLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...TGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGCTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 5 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATCAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCT +
Preference number: 5 (lower is better)
Translates to: KEESVEYLISDLLDSLLNQWLVI*VLSPSS
Trigger: AGATGATGGTGACAAGACCAAGATGACCAACCACTG...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCATTTCATGATCTTCATTaGCTGAAAACACACAGTGGT +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPFHDLH*LKTHSG
Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTTTCATGATCTTCATTaGCTGAAAACACACAGTGGT +
Preference number: 5 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLFHDLH*LKTHSG
Trigger: ACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAA...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: VCQITYMSRYTTTKVACNSAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGCATTTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LLSHLIFLTFRFGFFFCISAIHA*KSLTAN
Trigger: ATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGA...AATGCAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAACAAGTTCTTCCTTCTaGTTCCACTCAACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKTSSSF*FHSTAF
Trigger: GAACGCTGTTGAGTGGAACAAGAAGGAAGAACTTGT...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCATATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp ACTGGTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: TGLSNHIHEQIHNYQSGLYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...CAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TTTCTCAAAGACGAGGTAACAGAGTTGGCATCTTTTTCTGCCATCCATGCTTTGTATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: FLKDEVTELASFSAIHALYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...CAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTACCTCGTCTTTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436868.5
CDS-3UTR CAA 90 bp GTGCTTGTTGAGCCATTTAATTTTCCTCACCTTCCGATTCGGATTCTTCTTCTGGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: VLVEPFNFPHLPIRILLLDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...CAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAAATGGCTCAACAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp ATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTGAGCCAGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: IPNQKVVCGNLGIVLVEPDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATGTAGAGTCCAGAAATTaGGCTACAGCTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: KEESVEYLISDLLDSLLNVESRN*ATASRS
Trigger: TGACCTTGAAGCTGTAGCCAAATTTCTGGACTCTAC...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAGGAGGAGTCTGTTGAGTATTTAATTTCAGATCTACTTGACTCCTTGTTGAATAGTTCAAGCAGCCTCTaGTCTAAGTTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: KEESVEYLISDLLDSLLNSSSSL*SKLAFL
Trigger: GAGAAAAGCCAACTTAGACAAGAGGCTGCTTGAACT...ATTCAACAAGGAGTCAAGTAGATCTGAAATTAAATACTCAACAGACTCCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp TTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGCTTGTTTATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: FSIPNQKVVCGNLGIVLVYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...AACAAGCACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000407633.1
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp AAATGGTTCAGCATTCCCAATCAAAAAGTGGTGTGTGGTAACCTAGGTATTGTGGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: KWFSIPNQKVVCGNLGIVDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...CACAATACCTAGGTTACCACACACCACTTTTTGATTGGGAATGCTGAACCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp CTTAAGACCTGCGTCAGTGAAGTATTTAGCAAAATGATCCACACTCTGTCTGTTGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: LKTCVSEVFSKMIHTLSVDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...AACAGACAGAGTGTGGATCATTTTGCTAAATACTTCACTGACGCAGGTCTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS-3UTR CAA 90 bp GTTTGTCAAATCACATACATGAGCAGATACACAACTACCAAAGTGGCCTGTAATTATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: VCQITYMSRYTTTKVACNYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...ATTACAGGCCACTTTGGTAGTTGTGTATCTGCTCATGTATGTGATTTGACAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258761.8
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAACTACTTGACTCCTTGTaGAATGGCTTTAAGTTAGCA +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKLLDSL*NGFKLA
Trigger: TGCTAACTTAAAGCCATTCAACAAGGAGTCAAGTAG...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAATATACCATTTCAGTATaGCTTCTTCGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKYTISV*LLRSEH
Trigger: ATGTTCTGAGCGAAGAAGCAATACTGAAATGGTATA...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS-3UTR CAA 90 bp GTCCCAAGTATAATAGCTGATGCCTCAGGGCTCCATTTAAAAACAAAACAAAAAGATCTACTTGACTCCTaGTTGAATGGCTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: VPSIIADASGLHLKTKQKDLLDS*LNGFKL
Trigger: TAACTTAAAGCCATTCAACAAGGAGTCAAGTAGATC...TTTTTGTTTTGTTTTTAAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000452975.6
ENST00000630952.2
CDS GCA 72 bp GCGACGACGCGCAAGGCTGGGGGCTGCGGCGATTCGTaGAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: ATTRKAGGCGDS*SSSGSSSSSSS
Trigger: ACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS GCA 72 bp TCCGAGGAGGTAGCGACGACGCGCAAGGCTGGGGGCTaGGGCGATTCGTGCAGCAGCAGCGGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SEEVATTRKAGG*GDSCSSSGSSS
Trigger: GCTGCTGCTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000630952.2
CDS CCA 72 bp TCACCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTGCAGCAGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SPVRGGSDDAQG*GLRRFVQQQRQ
Trigger: CTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415365.5
ENST00000432311.5
ENST00000433922.6
ENST00000437745.5
CDS CCA 72 bp TCATCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTGCAGCAGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SSVRGGSDDAQG*GLRRFVQQQRQ
Trigger: CTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405202.5
CDS CCA 72 bp ATTTCTGTCCGAGGAGGTAGCGACGACGCGCAAGGCTaGGGGCTGCGGCGATTCGTGCAGCAGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: ISVRGGSDDAQG*GLRRFVQQQRQ
Trigger: CTGCCGCTGCTGCTGCACGAATCGCCGCAGCCCCCAGCCTTGCGCGTCGTCGCTACCTCCTCGGACAGAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258761.8
ENST00000436868.5
ENST00000630952.2
CDS CAA 90 bp CTGTCGGTGAAGAGACTGGTGAGGATGGTGGCGGGCAGGGTGCCATaGCCCAGCAGAATCCCCGACAGCATCGCCAACTTTGTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LSVKRLVRMVAGRVP*PSRIPDSIANFVCS
Trigger: AGAGCAGACAAAGTTGGCGATGCTGTCGGGGATTCTGCTGGGCAATGGCACCCTGCCCGCCACCATCCTCACCAGTCTCTTCACCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000433922.6
ENST00000436868.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
ENST00000480517.5
CDS GCA 72 bp AGTGGTTGGTCATCTTGGTCTTGTCACCATCATCTATaGGCGTTCCTCCAGGGGCAAGCATACTGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: SGWSSWSCHHHL*AFLQGQAYCQP
Trigger: TGGCTGGCAGTATGCTTGCCCCTGGAGGAACGCGCATAGATGATGGTGACAAGACCAAGATGACCAACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000430000.1
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
ENST00000480517.5
ENST00000630952.2
CDS CAA 90 bp TTTTGTTGTCTGACAGGCGAGAAAACAGGAGCCTCGTTACCTTCTTaGACTAAGCTGTCGGTGAAGAGACTGGTGAGGATGGTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: FCCLTGEKTGASLPS*TKLSVKRLVRMVAG
Trigger: GCCCGCCACCATCCTCACCAGTCTCTTCACCGACAGCTTAGTCAAAGAAGGTAACGAGGCTCCTGTTTTCTCGCCTGTCAGACAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480517.5
CDS GCA 72 bp CCCAGCAGAATCCCCGACAGCATCGCCAACTTTGTCTaGTCTGTTTCGGAAAAGGCTTTAAGGAAGAGGAGA +
Preference number: 6 (lower is better)
Translates to: PSRIPDSIANFV*SVSEKALRKRR
Trigger: TCTCCTCTTCCTTAAAGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCGATGCTGTCGGGGATTCTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000430000.1
ENST00000433922.6
ENST00000438834.5
ENST00000446596.5
ENST00000480517.5
CDS CAA 72 bp CTGACAGGCGAGAAAACAGGAGCCTCGTTACCTTCTTaGACTAAGCTGTCGGTGAAGAGACTGGTGAGGATG +
Preference number: 6 (lower is better)
Translates to: LTGEKTGASLPS*TKLSVKRLVRM
Trigger: CATCCTCACCAGTCTCTTCACCGACAGCTTAGTCAAAGAAGGTAACGAGGCTCCTGTTTTCTCGCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480517.5
CDS TCA 72 bp TTCTGCCATCCATGCTTTGAAAAGCTTGACAGCAAATaGGGCCGCAATGCCTCCTTCCTAAAAGAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: FCHPCFEKLDSK*GRNASFLKEVP
Trigger: GGGGACCTCTTTTAGGAAGGAGGCATTGCGGCCTCATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407633.1
CDS CCA 72 bp ACAGCTTCAAGGTCATCACCAGCCTCATTAAGCCCCTaGACAAGTGTATCCCTGAAGACTGTGGGTTCGAAT +
Preference number: 6 (lower is better)
Translates to: TASRSSPASLSP*TSVSLKTVGSN
Trigger: ATTCGAACCCACAGTCTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGCTGGTGATGACCTTGAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000430000.1
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
ENST00000480517.5
ENST00000630952.2
CDS CAA 72 bp TTTGCTGAAAACACACAGTGGTTGGTCATCTTGGTCTaGTCACCATCATCTATGCGCGTTCCTCCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: FAENTQWLVILV*SPSSMRVPPGA
Trigger: TGCCCCTGGAGGAACGCGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000430000.1
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
ENST00000480517.5
ENST00000630952.2
CDS CCA 72 bp CTTCATTTGCTGAAAACACACAGTGGTTGGTCATCTTaGTCTTGTCACCATCATCTATGCGCGTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LHLLKTHSGWSS*SCHHHLCAFLQ
Trigger: CTGGAGGAACGCGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000430000.1
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
ENST00000480517.5
ENST00000630952.2
CDS CAA 72 bp TCTTCATTTGCTGAAAACACACAGTGGTTGGTCATCTaGGTCTTGTCACCATCATCTATGCGCGTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSFAENTQWLVI*VLSPSSMRVPP
Trigger: TGGAGGAACGCGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000430000.1
ENST00000432311.5
ENST00000433922.6
ENST00000436868.5
ENST00000437745.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
ENST00000480517.5
ENST00000630952.2
CDS CAA 72 bp GCTCTCCAAGAGTGTCTATCCTTTAGCTGTTACTATTaGGAGCAGAGGCCCCACTTCCCTCTAAATTTAGCT +
Preference number: 6 (lower is better)
Translates to: ALQECLSFSCYY*EQRPHFPLNLA
Trigger: AGCTAAATTTAGAGGGAAGTGGGGCCTCTGCTCCAAATAGTAACAGCTAAAGGATAGACACTCTTGGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430000.1
CDS CAA 90 bp AAAGACGAGGTAACAGAGTTGGCATCTTTTTCTGCCATCCATGCTTaGAAAAGCTTGACAGCAAATGAGGCCGCAATGCCTTCTTTGACT +
Preference number: 6 (lower is better)
Translates to: KDEVTELASFSAIHA*KSLTANEAAMPSLT
Trigger: AGTCAAAGAAGGCATTGCGGCCTCATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTACCTCGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258761.8
ENST00000405202.5
ENST00000415365.5
ENST00000433922.6
ENST00000436868.5
ENST00000438834.5
ENST00000446596.5
ENST00000452975.6
CDS CAA 90 bp AGATATTCTGCTCTCCAAGAGTGTCTATCCTTTAGCTGTTACTATTaGGAGCAGAGGCCCCACTTCCCTCTAAATTTAGCTCTTCATGCT +
Preference number: 6 (lower is better)
Translates to: RYSALQECLSFSCYY*EQRPHFPLNLALHA
Trigger: AGCATGAAGAGCTAAATTTAGAGGGAAGTGGGGCCTCTGCTCCAAATAGTAACAGCTAAAGGATAGACACTCTTGGAGAGCAGAATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430000.1
CDS TCA 72 bp TTCTGCCATCCATGCTTTGAAAAGCTTGACAGCAAATaGGGCCGCAATGCCTTTTTCATTTCATCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: FCHPCFEKLDSK*GRNAFFISSSN
Trigger: ATTTGAAGATGAAATGAAAAAGGCATTGCGGCCTCATTTGCTGTCAAGCTTTTCAAAGCATGGATGGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432311.5
ENST00000437745.5
ENST00000630952.2