Pregenerated sensors for BZW1 (Homo sapiens)
Ensembl gene IDs: ENSG00000082153Ensembl transcript IDs: ENST00000409226.5, ENST00000409600.6, ENST00000410110.6, ENST00000447069.5, ENST00000450637.5, ENST00000452206.5, ENST00000460660.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATGAGTTACCAGCTATCCAGTTTTCTCCATTCTGTGTGCCGTCCTaGGCGCCATTGCTCCTAACTAGAATGGAAATGAGGTGTATTTAC | + |
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Preference number: 1 (lower is better) Translates to: NELPAIQFSPFCVPS*APLLLTRMEMRCIY Trigger: GTAAATACACCTCATTTCCATTCTAGTTAGGAGCAATGGCGCCCAGGACGGCACACAGAATGGAGAAAACTGGATAGCTGGTAACTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR GCA 90 bp | ATAATCAAGAAAGAATCTGTTAAGACCTTGAAAGACAGCAGGAAATaGTTTGTCTGTTGCCTGTGGTGGGGTAAGGAACAAAGCACAACT | + |
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Preference number: 1 (lower is better) Translates to: IIKKESVKTLKDSRK*FVCCLWWGKEQSTT Trigger: AGTTGTGCTTTGTTCCTTACCCCACCACAGGCAACAGACAAAGCATTTCCTGCTGTCTTTCAAGGTCTTAACAGATTCTTTCTTGATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAGGCGGAACTTGCAGTaGGCCAAGATCGCGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCRRNLQ*AKIAPL Trigger: CAGTGGCGCGATCTTGGCTCACTGCAAGTTCCGCCT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTATTAGCCAGGGGTGGTaGTGGCCGCCTGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCISQGW*WPPVIP Trigger: TGGGATTACAGGCGGCCACCACCACCCCTGGCTAAT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAGTGAGCTGAGATCATaGCATTGCACTCCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCSELRS*HCTPAQ Trigger: CTGGGCTGGAGTGCAATGGCATGATCTCAGCTCACT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR GCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTACCCCAAGGCGGAGCTTaGAGTGAGCCGAGATTGTGC | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILPQGGA*SEPRLC Trigger: GCACAATCTCGGCTCACTGCAAGCTCCGCCTTGGGG...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCCTTGAGGCCATAGGCTaGCACTGGCACCTGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: LLDKMTKQGILQILTTVPLEAIG*HWHLNS Trigger: AGAATTCAGGTGCCAGTGCCAGCCTATGGCCTCAAG...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTGTCTGTTGCCTGTGGTaGGGTAAGGAACAAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCVCCLW*GKEQST Trigger: TGTGCTTTGTTCCTTACCCCACCACAGGCAACAGAC...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAGAAGTCCAACCTCTTaGTCACATGCATTTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCRSPTS*SHAFPL Trigger: TAGGGGAAATGCATGTGACCAAGAGGTTGGACTTCT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCGCTGGCACTGGCACCTaGATTCTAAAATTACCACTT | + |
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Preference number: 2 (lower is better) Translates to: LLDKMTKQGILQILTTVPAGTGT*ILKLPL Trigger: AAGTGGTAATTTTAGAATTCAGGTGCCAGTGCCAGC...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCCAGCCTACTTCAGTATaGGAGCAGAGGTTTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: LLDKMTKQGILQILTTVPQPTSV*EQRFIS Trigger: ACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTG...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAGCAAGAGAATCGCTTaGACCCAGGAGGCAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILSKRIA*TQEAEI Trigger: AATCTCTGCCTCCTGGGTTCAAGCGATTCTCTTGCT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCGAGCACTATAGTAGTTaGCACAAGCAGTTAAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LLDKMTKQGILQILTTVPEHYSS*HKQLSL Trigger: AAGGCTTAACTGCTTGTGGCAACTACTATAGTGCTC...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTATCCTCGCTAATCCGGTaGAACCTCGTCTCTACTAAA | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILSSLIR*NLVSTK Trigger: TTTAGTAGAGACGAGGTTTCACCGGATTAGCGAGGA...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAGCCCAGGTAACAGAGTaGGACTGTCTCCAAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILAQVTE*DCLQNK Trigger: TTTGTTTTGGAGACAGTCTCACTCTGTTACCTGGGC...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTATTTGTCTGTTGCCTGTaGTGGGGTAAGGAACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILFVCCL*WGKEQS Trigger: GCTTTGTTCCTTACCCCACCACAGGCAACAGACAAA...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCTGTAGTTCTGGAAGATaGCACACTTTTTCACTATAC | + |
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Preference number: 2 (lower is better) Translates to: LLDKMTKQGILQILTTVPCSSGR*HTFSLY Trigger: GTATAGTGAAAAAGTGTGTCATCTTCCAGAACTACA...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTATCCTTCTGGATAAGATaGCAAAGCAAGGGATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILSFWIR*QSKGFC Trigger: GCAGAATCCCTTGCTTTGTCATCTTATCCAGAAGGA...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR GCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAGACATGCCTGCCAATaGAAAGGTCTATCACTAGGT | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILRHACQ*KGLSLG Trigger: ACCTAGTGATAGACCTTTGCATTGGCAGGCATGTCT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR GCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAAAGACAGCAGGAAATaGTTTGTCTGTTGCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILKDSRK*FVCCLW Trigger: CCACAGGCAACAGACAAAGCATTTCCTGCTGTCTTT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAGCCATAGGCTGGCACTaGCACCTGAATTCTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILAIGWH*HLNSKI Trigger: AATTTTAGAATTCAGGTGCCAGTGCCAGCCTATGGC...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAGCATGCATTCTCAATaGGGGTCAATCACTACCAAG | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILSMHSQ*GSITTK Trigger: CTTGGTAGTGATTGACCCCCATTGAGAATGCATGCT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAATCTGTTAAGACCTTaGAAGACAGCAGGAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILNLLRP*KTAGNA Trigger: AGCATTTCCTGCTGTCTTTCAAGGTCTTAACAGATT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTACAACTCATTAAGAACTaGGACTATACTCCTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: YLINVVAPQMHYTTTNILQLIKN*DYTPSI Trigger: TATGCTAGGAGTATAGTCTCAGTTCTTAATGAGTTG...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR CCA 72 bp | AGTACATTTAAAAATACCTTAGCCGGGCTTGGTTGGTaGGCGCCTGTAATCCCAGCTAGGAGGCTGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: STFKNTLAGLGW*APVIPARRLRQ Trigger: CTGTCTCAGCCTCCTAGCTGGGATTACAGGCGCCCACCAACCAAGCCCGGCTAAGGTATTTTTAAATGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR CCA 72 bp | CCAGCTATCCAGTTTTCTCCATTCTGTGTGCCGTCCTaGGCGCCATTGCTCCTAACTAGAATGGAAATGAGG | + |
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Preference number: 3 (lower is better) Translates to: PAIQFSPFCVPS*APLLLTRMEMR Trigger: CCTCATTTCCATTCTAGTTAGGAGCAATGGCGCCCAGGACGGCACACAGAATGGAGAAAACTGGATAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCGCTGAGATCATGCCATaGCACTCCAGCCCAGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: LLDKMTKQGILQILTTVPAEIMP*HSSPGN Trigger: GTTACCTGGGCTGGAGTGCAATGGCATGATCTCAGC...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCACAGCAGGAAATGCTTaGTCTGTTGCCTGTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LLDKMTKQGILQILTTVPTAGNA*SVACGG Trigger: CCCACCACAGGCAACAGACAAAGCATTTCCTGCTGT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCAAGCAAGAGAATCGCTaGAACCCAGGAGGCAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: LLDKMTKQGILQILTTVPKQENR*NPGGRD Trigger: ATCTCTGCCTCCTGGGTTCAAGCGATTCTCTTGCTT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCCAAAGACAAAGGTACTaGTCACATCATCCAGATTCC | + |
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Preference number: 3 (lower is better) Translates to: LLDKMTKQGILQILTTVPQRQRY*SHHPDS Trigger: GGAATCTGGATGATGTGACAAGTACCTTTGTCTTTG...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| 3UTR GCA 72 bp | AAAGAATCTGTTAAGACCTTGAAAGACAGCAGGAAATaGTTTGTCTGTTGCCTGTGGTGGGGTAAGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: KESVKTLKDSRK*FVCCLWWGKEQ Trigger: TTGTTCCTTACCCCACCACAGGCAACAGACAAAGCATTTCCTGCTGTCTTTCAAGGTCTTAACAGATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCCGATGTACCGGCAACTaGGGCGGTGTCTCCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPRCTGN*GGVSSA Trigger: CGCAGAGGAGACACCGCCGCAGTTGCCGGTACATCG...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTCCCCAAGGCGGAGCTTaGAGTGAGCCGAGATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCPQGGA*SEPRLC Trigger: GCACAATCTCGGCTCACTGCAAGCTCCGCCTTGGGG...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTTGCCAGTGTACCACCTaGGGCCAGCATTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCCQCTT*GQHSTS Trigger: GCTGGTGGAATGCTGGCCCCAGGTGGTACACTGGCA...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTTTCTGTGTGCCGTCCTaGGCGCCATTGCTCCTAACT | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCFCVPS*APLLLT Trigger: AGTTAGGAGCAATGGCGCCCAGGACGGCACACAGAA...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAGGCGGAACTTGCAGTaGGCCAAGATCGCGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILRRNLQ*AKIAPL Trigger: CAGTGGCGCGATCTTGGCTCACTGCAAGTTCCGCCT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCAGTGAGCTGAGATCATaGCATTGCACTCCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPSELRS*HCTPAQ Trigger: CTGGGCTGGAGTGCAATGGCATGATCTCAGCTCACT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCAGCAAGAGAATCGCTTaGACCCAGGAGGCAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPSKRIA*TQEAEI Trigger: AATCTCTGCCTCCTGGGTTCAAGCGATTCTCTTGCT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTATTAGCCGGGCTTGGTTaGTGGGCGCCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILLAGLG*WAPVIP Trigger: TGGGATTACAGGCGCCCACCAACCAAGCCCGGCTAA...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTGCTGGCACTGGCACCTaGATTCTAAAATTACCACTT | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCAGTGT*ILKLPL Trigger: AAGTGGTAATTTTAGAATTCAGGTGCCAGTGCCAGC...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTCAGCCTACTTCAGTATaGGAGCAGAGGTTTATCAGT | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCQPTSV*EQRFIS Trigger: ACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTG...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTTCCTTCTGGATAAGATaGCAAAGCAAGGGATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCSFWIR*QSKGFC Trigger: GCAGAATCCCTTGCTTTGTCATCTTATCCAGAAGGA...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAGACATGCCTGCCAATaGAAAGGTCTATCACTAGGT | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCRHACQ*KGLSLG Trigger: ACCTAGTGATAGACCTTTGCATTGGCAGGCATGTCT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTATTTCTCCATTCTGTGTaGCGTCCTGGGCGCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILFLHSV*RPGRHC Trigger: GCAATGGCGCCCAGGACGGCACACAGAATGGAGAAA...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCTTTGTCTGTTGCCTGTaGTGGGGTAAGGAACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPFVCCL*WGKEQS Trigger: GCTTTGTTCCTTACCCCACCACAGGCAACAGACAAA...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCAAAGACAGCAGGAAATaGTTTGTCTGTTGCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPKDSRK*FVCCLW Trigger: CCACAGGCAACAGACAAAGCATTTCCTGCTGTCTTT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCGCCATAGGCTGGCACTaGCACCTGAATTCTAAAATT | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPAIGWH*HLNSKI Trigger: AATTTTAGAATTCAGGTGCCAGTGCCAGCCTATGGC...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCAGAAGTCCAACCTCTTaGTCACATGCATTTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPRSPTS*SHAFPL Trigger: TAGGGGAAATGCATGTGACCAAGAGGTTGGACTTCT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAATCTGTTAAGACCTTaGAAGACAGCAGGAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCNLLRP*KTAGNA Trigger: AGCATTTCCTGCTGTCTTTCAAGGTCTTAACAGATT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTTTTAAATGGTTACACTaGCTGGAAACAGAACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCFKWLH*LETEQL Trigger: GAGCTGTTCTGTTTCCAGTCAGTGTAACCATTTAAA...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAATGGTTACACTGACTaGAAACAGAACAGCTCAATT | + |
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Preference number: 4 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCNGYTD*KQNSSI Trigger: AATTGAGCTGTTCTGTTTCCAGTCAGTGTAACCATT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCCAACTCATTAAGAACTaGGACTATACTCCTAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPQLIKN*DYTPSI Trigger: TATGCTAGGAGTATAGTCTCAGTTCTTAATGAGTTG...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAGTGCCAAGAGCTAAATaGGTTACCAGCTATCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILVPRAK*VTSYPV Trigger: AACTGGATAGCTGGTAACTCATTTAGCTCTTGGCAC...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CCA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCATAGAATTACTGGCTTaGATGGCTGTATTTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLDKMTKQGILQILTTVPIELLA*MAVFEV Trigger: AACCTCAAATACAGCCATCCAAGCCAGTAATTCTAT...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTACCTGTAGACAGCATCTaGGGAATATTTGTACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILPVDSI*GIFVQR Trigger: CCTTTGTACAAATATTCCTCAGATGCTGTCTACAGG...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR GCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAATAGTTGTCAGTTCCTaGAAGCAGCCTACTTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILIVVSS*KQPTSV Trigger: TACTGAAGTAGGCTGCTTGCAGGAACTGACAACTAT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAAACTTGTTAAAAACCTaGGCAAATGCTTGCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILNLLKT*ANACMV Trigger: GACCATGCAAGCATTTGCTCAGGTTTTTAACAAGTT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR TCA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTATGTAGTTCTGGAAGATaGCACACTTTTTCACTATAC | + |
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Preference number: 4 (lower is better) Translates to: YLINVVAPQMHYTTTNILCSSGR*HTFSLY Trigger: GTATAGTGAAAAAGTGTGTCATCTTCCAGAACTACA...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS GCA 90 bp | GTTAGCCAGGCCGGGCACGGCCCAGAGGGAGCCCGCCTCGGCCACTaGCTTCGCAGCCAGCGCCGCGGCGCACACCCGGACCCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: VSQAGHGPEGARLGH*LRSQRRGAHPDPTS Trigger: GGAGGTGGGGTCCGGGTGTGCGCCGCGGCGCTGGCTGCGAAGGCAGTGGCCGAGGCGGGCTCCCTCTGGGCCGTGCCCGGCCTGGCTAAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409226.5 |
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| CDS GCA 90 bp | GGTGTCTCCTCTGCGACCGGAACTAACGCCAGGAGGAGGGAGAGGTaGCACCCCCGCCCGGACCGCTCTCCTATCGCGAGATTTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GVSSATGTNARRRER*HPRPDRSPIARFLP Trigger: GGGAAGAAATCTCGCGATAGGAGAGCGGTCCGGGCGGGGGTGGCACCTCTCCCTCCTCCTGGCGTTAGTTCCGGTCGCAGAGGAGACACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452206.5 |
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| CDS TCA 90 bp | CAAGCCTGGTTACGGGCAGCACCATCCTACCCTAGGTCATGCCTGTaGCCGCAACAGCGGCCGCCTTGCACCACTCAGGCCTGCAAAACT | + |
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Preference number: 5 (lower is better) Translates to: QAWLRAAPSYPRSCL*PQQRPPCTTQACKT Trigger: AGTTTTGCAGGCCTGAGTGGTGCAAGGCGGCCGCTGTTGCGGTCACAGGCATGACCTAGGGTAGGATGGTGCTGCCCGTAACCAGGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447069.5 |
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| CDS CCA 90 bp | GATAGGGGAGGGGAGAGACGTTTCCAGTCTTCTTTATTCCCTTACTaGGTTCCACGTCGCCTGGACACTTGTCCTAGACTAGCTTATTTT | + |
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Preference number: 5 (lower is better) Translates to: DRGGERRFQSSLFPY*VPRRLDTCPRLAYF Trigger: AAAATAAGCTAGTCTAGGACAAGTGTCCAGGCGACGTGGAACCCAGTAAGGGAATAAAGAAGACTGGAAACGTCTCTCCCCTCCCCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452206.5 |
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| CDS-3UTR CAA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTACAGCAGGAAATGCTTaGTCTGTTGCCTGTGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCTAGNA*SVACGG Trigger: CCCACCACAGGCAACAGACAAAGCATTTCCTGCTGT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CAA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAAGCAAGAGAATCGCTaGAACCCAGGAGGCAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCKQENR*NPGGRD Trigger: ATCTCTGCCTCCTGGGTTCAAGCGATTCTCTTGCTT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CAA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAGCTGAGATCATGCCATaGCACTCCAGCCCAGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: YLINVVAPQMHYTTTNILAEIMP*HSSPGN Trigger: GTTACCTGGGCTGGAGTGCAATGGCATGATCTCAGC...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CAA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTCAAAGACAAAGGTACTaGTCACATCATCCAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCQRQRY*SHHPDS Trigger: GGAATCTGGATGATGTGACAAGTACCTTTGTCTTTG...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CAA 90 bp | CTTCTGGATAAGATGACAAAGCAAGGGATTCTGCAGATTTTAACCACTGTCCCCGAACTAGCTCCTAGCTaGTTTTGCCAAGGTATTTTT | + |
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Preference number: 5 (lower is better) Translates to: LLDKMTKQGILQILTTVPELAPS*FCQGIF Trigger: AAAAATACCTTGGCAAAACAAGCTAGGAGCTAGTTC...GGGGACAGTGGTTAAAATCTGCAGAATCCCTTGCTTTGTCATCTTATCCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CAA 90 bp | TGTCAGTTCCTGCAAGCAGCCTACTTCAGTATGAGAGCAGAGGTTTATCAGTGTAAATGCCAGAGACTGTaGAGTATCTTTTTGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CQFLQAAYFSMRAEVYQCKCQRL*SIFLKS Trigger: TGACTTCAAAAAGATACTCAACAGTCTCTGGCATTT...ACACTGATAAACCTCTGCTCTCATACTGAAGTAGGCTGCTTGCAGGAACTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS-3UTR CAA 90 bp | TATTTGATTAACGTTGTAGCACCCCAAATGCACTACACAACCACCAACATTCTAACAGCTCAATTATATTaGATTAACGTTGTAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: YLINVVAPQMHYTTTNILTAQLY*INVVAP Trigger: GGGTGCTACAACGTTAATCAAATATAATTGAGCTGT...TAGAATGTTGGTGGTTGTGTAGTGCATTTGGGGTGCTACAACGTTAATCAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409600.6 |
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| CDS CCA 72 bp | TGGAAGAGCGGAGCCGGCCCCCGCCGGTCTCGAAGTTaGACGCGTCCTCCTGGAGTCCCTCGCCGCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WKSGAGPRRSRS*TRPPGVPRRRP Trigger: GGGCCGGCGGCGAGGGACTCCAGGAGGACGCGTCCAACTTCGAGACCGGCGGGGGCCGGCTCCGCTCTTCCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000410110.6 ENST00000452206.5 |
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| CDS CAA 72 bp | TTGGAAGAGCGGAGCCGGCCCCCGCCGGTCTCGAAGTaGGACGCGTCCTCCTGGAGTCCCTCGCCGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: LEERSRPPPVSK*DASSWSPSPPA Trigger: GGCCGGCGGCGAGGGACTCCAGGAGGACGCGTCCAACTTCGAGACCGGCGGGGGCCGGCTCCGCTCTTCCAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000410110.6 ENST00000452206.5 |
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| CDS CAA 72 bp | CCGCTGCGTCGTCCGCCCTCTTCACACATGGAGGGGTaGGAAGAGCGGAGCCGGCCCCCGCCGGTCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: PLRRPPSSHMEG*EERSRPPPVSK Trigger: CTTCGAGACCGGCGGGGGCCGGCTCCGCTCTTCCAACCCCTCCATGTGTGAAGAGGGCGGACGACGCAGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000410110.6 ENST00000452206.5 |
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| CDS CCA 72 bp | CGCTGCGTCGTCCGCCCTCTTCACACATGGAGGGGTTaGAAGAGCGGAGCCGGCCCCCGCCGGTCTCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RCVVRPLHTWRG*KSGAGPRRSRS Trigger: ACTTCGAGACCGGCGGGGGCCGGCTCCGCTCTTCCAACCCCTCCATGTGTGAAGAGGGCGGACGACGCAGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000410110.6 ENST00000452206.5 |
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| CDS GCA 72 bp | TCTGCGACCGGAACTAACGCCAGGAGGAGGGAGAGGTaGCACCCCCGCCCGGACCGCTCTCCTATCGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: SATGTNARRRER*HPRPDRSPIAR Trigger: TCTCGCGATAGGAGAGCGGTCCGGGCGGGGGTGGCACCTCTCCCTCCTCCTGGCGTTAGTTCCGGTCGCAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452206.5 |
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| CDS CAA 72 bp | GCCCGGACCGCTCTCCTATCGCGAGATTTCTTCCCCTaGCCCCGCCCTGATCGTGGACAGGCGCTTCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: ARTALLSRDFFP*PRPDRGQALPP Trigger: AGGCGGAAGCGCCTGTCCACGATCAGGGCGGGGCAAGGGGAAGAAATCTCGCGATAGGAGAGCGGTCCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452206.5 |
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| CDS GCA 72 bp | CCCGGACCGCTCTCCTATCGCGAGATTTCTTCCCCTTaGCCCGCCCTGATCGTGGACAGGCGCTTCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PGPLSYREISSP*PALIVDRRFRL Trigger: AAGGCGGAAGCGCCTGTCCACGATCAGGGCGGGGCAAGGGGAAGAAATCTCGCGATAGGAGAGCGGTCCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452206.5 |
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| CDS TCA 72 bp | TTACGGGCAGCACCATCCTACCCTAGGTCATGCCTGTaGCCGCAACAGCGGCCGCCTTGCACCACTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LRAAPSYPRSCL*PQQRPPCTTQA Trigger: GGCCTGAGTGGTGCAAGGCGGCCGCTGTTGCGGTCACAGGCATGACCTAGGGTAGGATGGTGCTGCCCGTAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447069.5 |
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| CDS CAA 90 bp | ATTATTCATAAAAGACACCATCACACAACAGAGGCCGCGGCGGCTTaGTTAGCCAGGCCGGGCACGGCCCAGAGGGAGCCCGCCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: IIHKRHHHTTEAAAA*LARPGTAQREPASA Trigger: GGCCGAGGCGGGCTCCCTCTGGGCCGTGCCCGGCCTGGCTAACAAAGCCGCCGCGGCCTCTGTTGTGTGATGGTGTCTTTTATGAATAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409226.5 |
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| CDS GCA 72 bp | GCCCTGATCGTGGACAGGCGCTTCCGCCTTTTCTATTaGGCGCGGATTAGGGTGAGGGACTGGGATAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: ALIVDRRFRLFY*ARIRVRDWDRG Trigger: TCCCCTATCCCAGTCCCTCACCCTAATCCGCGCGCAATAGAAAAGGCGGAAGCGCCTGTCCACGATCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452206.5 |
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| CDS CCA 72 bp | ACACCCTCTCTCCTTGAATCCTGGCTCCAGCTATCCTaGTTACGTTCTGAATGTGCCTTTGCACGGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: TPSLLESWLQLS*LRSECAFARYF Trigger: AAAATACCGTGCAAAGGCACATTCAGAACGTAACCAGGATAGCTGGAGCCAGGATTCAAGGAGAGAGGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450637.5 |
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| CDS GCA 72 bp | TTCTTTCTGGTATCTTCTTTTGAGGCTTTAGTAATATaGAAGTACCTGTCAGAGAAGGCAAGATACACAAGA | + |
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Preference number: 6 (lower is better) Translates to: FFLVSSFEALVI*KYLSEKARYTR Trigger: TCTTGTGTATCTTGCCTTCTCTGACAGGTACTTGCATATTACTAAAGCCTCAAAAGAAGATACCAGAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460660.1 |
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