RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BVES (Homo sapiens)

Ensembl gene IDs: ENSG00000112276

Ensembl transcript IDs: ENST00000314641.10, ENST00000336775.9, ENST00000446408.2

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGGCATCTGTGAAGAGGACGACGCCACGCCCGCTGGGAAGGGCTaGCCTGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACA +
Preference number: 1 (lower is better)
Translates to: RGICEEDDATPAGKG*PACQVLGLEPPHAT
Trigger: TGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCGTCCTCTTCACAGATGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 90 bp CGACGCCACGCCCGCTGGGAAGGGCTGACCTGCATGCCAGGTGCTTaGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: RRHARWEGLTCMPGA*LGATTRNSMKLSLE
Trigger: CTCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR GCA 90 bp AGGACGACGCCACGCCCGCTGGGAAGGGCTGACCTGCATGCCAGGTaGTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCT +
Preference number: 1 (lower is better)
Translates to: RTTPRPLGRADLHAR*LAWSHHTQQHETFS
Trigger: AGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 90 bp CCACGCCCGCTGGGAAGGGCTGACCTGCATGCCAGGTGCTTGGCTTaGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAGTGCCA +
Preference number: 1 (lower is better)
Translates to: PRPLGRADLHARCLA*SHHTQQHETFSGVP
Trigger: TGGCACTCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 90 bp GAATCAAGGCCCTCACTGCAGTACCTGGGTGGGGTGTCCATGGCCTaGCCTGTAGTAAACCCTCTGCCTTCCACTGTGTTCACGTTCGCA +
Preference number: 1 (lower is better)
Translates to: ESRPSLQYLGGVSMA*PVVNPLPSTVFTFA
Trigger: TGCGAACGTGAACACAGTGGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTGCAGTGAGGGCCTTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 90 bp GAGCTTCATTCAACGGAGCGTCCTGGCCAAGTGCCACAGCCACGCTaGCCAGACACACTGACCAGTTACGCATTTCCCACCAGCCAAATG +
Preference number: 1 (lower is better)
Translates to: ELHSTERPGQVPQPR*PDTLTSYAFPTSQM
Trigger: CATTTGGCTGGTGGGAAATGCGTAACTGGTCAGTGTGTCTGGCCAGCGTGGCTGTGGCACTTGGCCAGGACGCTCCGTTGAATGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 90 bp AGGAAAAAGAGCTCTGGAATCAAGGCCCTCACTGCAGTACCTGGGTaGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: RKKSSGIKALTAVPG*GVHGLACSKPSAFH
Trigger: GTGGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTGCAGTGAGGGCCTTGATTCCAGAGCTCTTTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 90 bp CCTGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATaGAACTTTCTCTGGAGTGCCAAGTCATTACCTGGAAACACTGGG +
Preference number: 1 (lower is better)
Translates to: PACQVLGLEPPHATA*NFLWSAKSLPGNTG
Trigger: CCCAGTGTTTCCAGGTAATGACTTGGCACTCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR GCA 90 bp TTAAAGGAAAGTAGTCTCGGCACTATGACATCACAGTTACACCTGTaGTCTCAGGTACAGGGCGAAAGTGAGAGCGAGAGCGCACGAGAG +
Preference number: 1 (lower is better)
Translates to: LKESSLGTMTSQLHL*SQVQGESESESARE
Trigger: CTCTCGTGCGCTCTCGCTCTCACTTTCGCCCTGTACCTGAGAGCACAGGTGTAACTGTGATGTCATAGTGCCGAGACTACTTTCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 90 bp TATGACATCACAGTTACACCTGTGCTCTCAGGTACAGGGCGAAAGTaGGAGCGAGAGCGCACGAGAGAGTTCAACCTGAGAGAGCTTTAT +
Preference number: 1 (lower is better)
Translates to: YDITVTPVLSGTGRK*ERERTREFNLRELY
Trigger: ATAAAGCTCTCTCAGGTTGAACTCTCTCGTGCGCTCTCGCTCTCACTTTCGCCCTGTACCTGAGAGCACAGGTGTAACTGTGATGTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 90 bp GTACAGGGCGAAAGTGAGAGCGAGAGCGCACGAGAGAGTTCAACCTaGGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTG +
Preference number: 1 (lower is better)
Translates to: VQGESESESARESST*ESFIISSLGCHSPL
Trigger: CAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAGGTTGAACTCTCTCGTGCGCTCTCGCTCTCACTTTCGCCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR GCA 90 bp ACTCCAAATCCCAAGGAAGTTGAGTTTAGCTGGAGGTTAACCCCGTaGTCAGAAACCCATCTGTTATCTTTCCAGCTTCAGGTTTCAGAG +
Preference number: 1 (lower is better)
Translates to: TPNPKEVEFSWRLTP*SETHLLSFQLQVSE
Trigger: CTCTGAAACCTGAAGCTGGAAAGATAACAGATGGGTTTCTGAGCACGGGGTTAACCTCCAGCTAAACTCAACTTCCTTGGGATTTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 90 bp GCACAGCATCCTACCATTCCAAATTCTTGGGACTTTGAGTTGAGTTaGGAATTACTACAAGAGGAGGTTAGGAAACCAGGATTGGAAAGA +
Preference number: 1 (lower is better)
Translates to: AQHPTIPNSWDFELS*ELLQEEVRKPGLER
Trigger: TCTTTCCAATCCTGGTTTCCTAACCTCCTCTTGTAGTAATTCTCAACTCAACTCAAAGTCCCAAGAATTTGGAATGGTAGGATGCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 90 bp ACTTTCTACTCAGGGAAGGATGTTACATCTAATGACTGTATAGAGTaGTTTTGTAAATTAGTCTTATGCGCGTGTAAACTAAATGGGCTG +
Preference number: 1 (lower is better)
Translates to: TFYSGKDVTSNDCIE*FCKLVLCACKLNGL
Trigger: CAGCCCATTTAGTTTACACGCGCATAAGACTAATTTACAAAATCACTCTATACAGTCATTAGATGTAACATCCTTCCCTGAGTAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CAA 90 bp ACGACGCCACGCCCGCTGGGAAGGGCTGACCTGCATGCCAGGTGCTaGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: TTPRPLGRADLHARC*AWSHHTQQHETFSG
Trigger: TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR GCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGAGCGTCCTGGCCAAGTaGCACAGCCACGCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWSVLAK*HSHAGQ
Trigger: CTGGCCAGCGTGGCTGTGGCACTTGGCCAGGACGCT...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGTGCCCAGGCTGGTCTTaGACTCCTGGGCTTAAGCAA +
Preference number: 2 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWCPGWS*TPGLKQ
Trigger: TTGCTTAAGCCCAGGAGTTCAAGACCAGCCTGGGCA...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGCAGGCTGGAGTGCAGTaGTGTGATCTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWQAGVQ*CDLCSL
Trigger: CAGTGAGCACAGATCACACCACTGCACTCCAGCCTG...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCCCTCACTGCAGTACCTaGGTGGGGTGTCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVPHCST*VGCPWP
Trigger: AGGCCATGGACACCCCACCCAGGTACTGCAGTGAGG...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAAACGTAACAGGAGACTaGCTCAAAGTTGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGNVTGD*LKVGSS
Trigger: ACTAGAACCAACTTTGAGTCAGTCTCCTGTTACGTT...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTAAGAGTTGCTTCTTTTaGCTCAGTTCACCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSKSCFF*LSSPEN
Trigger: GTTCTCAGGTGAACTGAGCCAAAAGAAGCAACTCTT...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGCGAGAGAGTTCAACCTaGGAGAGCTTTATAATTTCA +
Preference number: 2 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWRESST*ESFIIS
Trigger: TGAAATTATAAAGCTCTCTCAGGTTGAACTCTCTCG...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGATTACAATCTTCACATTaGGACACTGATACACACACA +
Preference number: 2 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGLQSSH*DTDTHT
Trigger: TGTGTGTGTATCAGTGTCTCAATGTGAAGATTGTAA...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR GCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCCAGTGGTGTGATCTGTaGTCACTGCAACCTCAACCT +
Preference number: 2 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVQWCDL*SLQPQP
Trigger: AGGTTGAGGTTGCAGTGAGCACAGATCACACCACTG...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCAAGCAGATCTTTCAGTaGCCTCATCCTGTGGCACCT +
Preference number: 2 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVKQIFQ*PHPVAP
Trigger: AGGTGCCACAGGATGAGGCCACTGAAAGATCTGCTT...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTCACGTTCGCAGCTCTaGCACTGGGGCATCTGGCAC +
Preference number: 2 (lower is better)
Translates to: LRELYNFKPRLSFTFASFSRSQL*HWGIWH
Trigger: GTGCCAGATGCCCCAGTGCCAGAGCTGCGAACGTGA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTTCAACGGAGCGTCCTaGCCAAGTGCCACAGCCACG +
Preference number: 2 (lower is better)
Translates to: LRELYNFKPRLSFTFASFFNGAS*PSATAT
Trigger: CGTGGCTGTGGCACTTGGCCAGGACGCTCCGTTGAA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR GCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAAAAAGCCATGAAAAAGTaGTGGTATTTTTCAGGATCT +
Preference number: 2 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEKAMKK*WYFSGS
Trigger: AGATCCTGAAAAATACCAGCACTTTTTCATGGCTTT...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
3UTR-3UTR CCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTATTTGGGGTTGTATATaGAGTAACTTTTGCAGACCA +
Preference number: 2 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSIWGCI*SNFCRP
Trigger: TGGTCTGCAAAAGTTACTCCATATACAACCCCAAAT...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR TCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTGCTGGCCAGACACACTaGCCAGTTACGCATTTCCCA +
Preference number: 2 (lower is better)
Translates to: LRELYNFKPRLSFTFASFAGQTH*PVTHFP
Trigger: TGGGAAATGCGTAACTGGTCAGTGTGTCTGGCCAGC...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR GCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTTCACAGTTACACCTGTaGTCTCAGGTACAGGGCGAA +
Preference number: 2 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVSQLHL*SQVQGE
Trigger: TTCGCCCTGTACCTGAGAGCACAGGTGTAACTGTGA...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR CCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCCAGGAAGCATCTTATTaGGAACTTTGGCAGCAAACA +
Preference number: 2 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVQEASY*ELWQQT
Trigger: TGTTTGCTGCCAAAGTTCCCAATAAGATGCTTCCTG...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR GCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTTTCCCACCAGCCAAATaGCACTGTTTACTAAACCAT +
Preference number: 2 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVFPPAK*HCLLNH
Trigger: ATGGTTTAGTAAACAGTGGCATTTGGCTGGTGGGAA...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR-3UTR GCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCAAAGCCATGAAAAAGTaGTGGTATTTTTCAGGATCT +
Preference number: 2 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVKAMKK*WYFSGS
Trigger: AGATCCTGAAAAATACCAGCACTTTTTCATGGCTTT...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR GCA 72 bp AGAGGACGACGCCACGCCCGCTGGGAAGGGCTGACCTaGATGCCAGGTGCTTGGCTTGGAGCCACCACACGC +
Preference number: 3 (lower is better)
Translates to: RGRRHARWEGLT*MPGAWLGATTR
Trigger: GCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCGTCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 72 bp TGTGAAGAGGACGACGCCACGCCCGCTGGGAAGGGCTaGCCTGCATGCCAGGTGCTTGGCTTGGAGCCACCA +
Preference number: 3 (lower is better)
Translates to: CEEDDATPAGKG*PACQVLGLEPP
Trigger: TGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCGTCCTCTTCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR GCA 72 bp CCACGCCCGCTGGGAAGGGCTGACCTGCATGCCAGGTaGTTGGCTTGGAGCCACCACACGCAACAGCATGAA +
Preference number: 3 (lower is better)
Translates to: PRPLGRADLHAR*LAWSHHTQQHE
Trigger: TTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 72 bp TCAACGGAGCGTCCTGGCCAAGTGCCACAGCCACGCTaGCCAGACACACTGACCAGTTACGCATTTCCCACC +
Preference number: 3 (lower is better)
Translates to: STERPGQVPQPR*PDTLTSYAFPT
Trigger: GGTGGGAAATGCGTAACTGGTCAGTGTGTCTGGCCAGCGTGGCTGTGGCACTTGGCCAGGACGCTCCGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 72 bp CTGGCCAAGTGCCACAGCCACGCTGGCCAGACACACTaGCCAGTTACGCATTTCCCACCAGCCAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: LAKCHSHAGQTH*PVTHFPPAKCH
Trigger: GTGGCATTTGGCTGGTGGGAAATGCGTAACTGGTCAGTGTGTCTGGCCAGCGTGGCTGTGGCACTTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 72 bp CCCTCACTGCAGTACCTGGGTGGGGTGTCCATGGCCTaGCCTGTAGTAAACCCTCTGCCTTCCACTGTGTTC +
Preference number: 3 (lower is better)
Translates to: PSLQYLGGVSMA*PVVNPLPSTVF
Trigger: GAACACAGTGGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTGCAGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR CCA 72 bp AGCTCTGGAATCAAGGCCCTCACTGCAGTACCTGGGTaGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCT +
Preference number: 3 (lower is better)
Translates to: SSGIKALTAVPG*GVHGLACSKPS
Trigger: AGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTGCAGTGAGGGCCTTGATTCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 72 bp ACAGTTACACCTGTGCTCTCAGGTACAGGGCGAAAGTaGGAGCGAGAGCGCACGAGAGAGTTCAACCTGAGA +
Preference number: 3 (lower is better)
Translates to: TVTPVLSGTGRK*ERERTREFNLR
Trigger: TCTCAGGTTGAACTCTCTCGTGCGCTCTCGCTCTCACTTTCGCCCTGTACCTGAGAGCACAGGTGTAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 72 bp CAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATaGAACTTTCTCTGGAGTGCCAAGTCATTACCTGGA +
Preference number: 3 (lower is better)
Translates to: QVLGLEPPHATA*NFLWSAKSLPG
Trigger: TCCAGGTAATGACTTGGCACTCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR GCA 72 bp AGTAGTCTCGGCACTATGACATCACAGTTACACCTGTaGTCTCAGGTACAGGGCGAAAGTGAGAGCGAGAGC +
Preference number: 3 (lower is better)
Translates to: SSLGTMTSQLHL*SQVQGESESES
Trigger: GCTCTCGCTCTCACTTTCGCCCTGTACCTGAGAGCACAGGTGTAACTGTGATGTCATAGTGCCGAGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 72 bp AGGAACTGGATTCAGAGTCTGTGTAAATTTTCTCAATaGGTGACCGAGCATGTAAATTTAACTCAAATGAAA +
Preference number: 3 (lower is better)
Translates to: RNWIQSLCKFSQ*VTEHVNLTQMK
Trigger: TTTCATTTGAGTTAAATTTACATGCTCGGTCACTCATTGAGAAAATTTACACAGACTCTGAATCCAGTTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
3UTR TCA 72 bp TCAGGGAAGGATGTTACATCTAATGACTGTATAGAGTaGTTTTGTAAATTAGTCTTATGCGCGTGTAAACTA +
Preference number: 3 (lower is better)
Translates to: SGKDVTSNDCIE*FCKLVLCACKL
Trigger: TAGTTTACACGCGCATAAGACTAATTTACAAAATCACTCTATACAGTCATTAGATGTAACATCCTTCCCTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGTCCGGAAGCTCCGCTaGCCGGGCCGGGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSVRKLR*PGRVPK
Trigger: CTTGGGGACCCGGCCCGGGCAGCGGAGCTTCCGGAC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGCACACGGGCTCAGCTaGTCGACGGGAGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSAHGLS*STGARR
Trigger: GCGTCGGGCTCCCGTCGAGCAGCTGAGCCCGTGTGC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CAGTACCTGGGTGGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCCCACACGCAACAGCATaGAACTTTCTCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: QYLGGVSMAWPVVNPLPSPHATA*NFLWSA
Trigger: GGCACTCCAGAGAAAGTTTCATGCTGTTGCGTGTGG...GGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGCAACGTGGCATCTGTaGAGAGGACGACGCCACGCC +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSATWHL*RGRRHA
Trigger: GGCGTGGCGTCGTCCTCTTCACAGATGCCACGTTGC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CAGTACCTGGGTGGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCTGGAGGCACACGGAGTaGTTCAAACAATCGCCGGTA +
Preference number: 4 (lower is better)
Translates to: QYLGGVSMAWPVVNPLPSWRHTE*FKQSPV
Trigger: TACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCA...GGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATCACGTTCGCAGCTCTaGCACTGGGGCATCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAESRSQL*HWGIWH
Trigger: GTGCCAGATGCCCCAGTGCCAGAGCTGCGAACGTGA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGGAAGGAGGTTGCGGGTaGGTGGCGCGGACCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMEGGCG*VARTSG
Trigger: ACCCGAGGTCCGCGCCACCCACCCGCAACCTCCTTC...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS-3UTR TCA 90 bp CAGTACCTGGGTGGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCTCTGTGTGCAGAGGCTaGGCTGATGTTCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QYLGGVSMAWPVVNPLPSSVCRG*ADVPAF
Trigger: AAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGA...GGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CAGTACCTGGGTGGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCGAGTTTGCAGTGAGCTaGGAATGTGCCACTACACTC +
Preference number: 4 (lower is better)
Translates to: QYLGGVSMAWPVVNPLPSEFAVS*ECATTL
Trigger: GAGTGTAGTGGCACATTCTCAGCTCACTGCAAACTC...GGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGCTGTCTTTGGGGCCGTaGTGGGAGCTGACATGGAGG +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWLSLGP*WELTWR
Trigger: CCTCCATGTCAGCTCCCATCACGGCCCCAAAGACAG...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTTTGAAAATTCCCGGCTaGTCCCTGGCGGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSLKIPG*SLAGSL
Trigger: CAGGCTCCCCGCCAGGGACCAGCCGGGAATTTTCAA...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGCTGAGGCAGGAGAGTaGCGTGAATCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSAEAGE*RESRRW
Trigger: CCACCTCCTGGATTCACGCCACTCTCCTGCCTCAGC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CAGTACCTGGGTGGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCAAGCAGATCTTTCAGTaGCCTCATCCTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: QYLGGVSMAWPVVNPLPSKQIFQ*PHPVAP
Trigger: AGGTGCCACAGGATGAGGCCACTGAAAGATCTGCTT...GGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGCCTCACTGCAGTACCTaGGTGGGGTGTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWPHCST*VGCPWP
Trigger: AGGCCATGGACACCCCACCCAGGTACTGCAGTGAGG...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGGTGCCACAGCCACGCTaGCCAGACACACTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWVPQPR*PDTLTS
Trigger: ACTGGTCAGTGTGTCTGGCCAGCGTGGCTGTGGCAC...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCAAACATGGCTGCCATaGGTAAGGGAGCGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSQTWLP*VRERVP
Trigger: GGGGACACGCTCCCTTACTCATGGCAGCCATGTTTG...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGGTGAGGCCTTGGGGCTaGAACGTGGCATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWVRPWG*NVASVK
Trigger: CTTCACAGATGCCACGTTGCAGCCCCAAGGCCTCAC...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAAGTGGCCTCATCCTGTaGCACCTGCCCAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGSGLIL*HLPSHL
Trigger: TAAATGGCTGGGCAGGTGCCACAGGATGAGGCCACT...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAAGTGCAGAGGCTGAGCTaGTGTTCCAGCTTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEVQRLS*CSSFLA
Trigger: AGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCAC...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATCGCTGGTGTGGGGATaGCACATGAAGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAESLVWG*HMKRGH
Trigger: ATGTCCTCTCTTCATGTGTCATCCCCACACCAGCGA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGACTCAGCAACCAAGTaGCTCTGTCTTTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSDSATK*LCLWGR
Trigger: ACGGCCCCAAAGACAGAGTCACTTGGTTGCTGAGTC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGCCCCGAAGAAACTGGTaGAAGCCGTCGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWPRRNW*KPSSLS
Trigger: TGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGG...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGTTCAACGGAGCGTCCTaGCCAAGTGCCACAGCCACG +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMFNGAS*PSATAT
Trigger: CGTGGCTGTGGCACTTGGCCAGGACGCTCCGTTGAA...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGCCCGCTGGGAAGGGCTaGCCTGCATGCCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLPAGKG*PACQVL
Trigger: AAGCACCTGGCATGCAGGTCAGCCCTTCCCAGCGGG...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCTCGGGGAAGGAGGTTaGGGGTGGGTGGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGLGEGG*GWVART
Trigger: GGTCCGCGCCACCCACCCGCAACCTCCTTCCCCGAG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS-3UTR CCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGCCCTGGCGGGGAGCCTaGGCAGCGCCGACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWPWRGA*AAPTKV
Trigger: AACTTTGGTCGGCGCTGCCCAGGCTCCCCGCCAGGG...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAAGAAGAGAGGACATGCTaGAGGTACCCCGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEEERTC*RYPEET
Trigger: AGTTTCTTCGGGGTACCTCCAGCATGTCCTCTCTTC...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTCGACGCCACGCCCGCTaGGAAGGGCTGACCTGCATG +
Preference number: 4 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVRRHAR*EGLTCM
Trigger: CATGCAGGTCAGCCCTTCCCAGCGGGCGTGGCGTCG...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGGTGTGCACAACATGGTaGCTCCAAATCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWVCTTW*LQIPRK
Trigger: CTTCCTTGGGATTTGGAGTCACCATGTTGTGCACAC...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGTGCCCAGGCTGGTCTTaGACTCCTGGGCTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMCPGWS*TPGLKQ
Trigger: TTGCTTAAGCCCAGGAGTTCAAGACCAGCCTGGGCA...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAGTAGTCTCGGCACTATaGCATCACAGTTACACCTGT +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGVVSAL*HHSYTC
Trigger: ACAGGTGTAACTGTGATGTCATAGTGCCGAGACTAC...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CAGTACCTGGGTGGGGTGTCCATGGCCTGGCCTGTAGTAAACCCTCTGCCTTCCCAATGTATTTGGAGATaGCGGTTCAAAAACGTCATC +
Preference number: 4 (lower is better)
Translates to: QYLGGVSMAWPVVNPLPSQCIWR*RFKNVI
Trigger: GATGACGTTTTTGAACCGGCATCTCCAAATACATTG...GGAAGGCAGAGGGTTTACTACAGGCCAGGCCATGGACACCCCACCCAGGTACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATGGAGGTTAACCCCGTaGTCAGAAACCCATCTGTTA +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEWRLTP*SETHLL
Trigger: TAACAGATGGGTTTCTGAGCACGGGGTTAACCTCCA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCAGCGTCCTGGCCAAGTaGCACAGCCACGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCSVLAK*HSHAGQ
Trigger: CTGGCCAGCGTGGCTGTGGCACTTGGCCAGGACGCT...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGCACATCGGTAGAGAGTaGCCCAGACGATATAAAGGG +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWHIGRE*PRRYKG
Trigger: CCCTTTATATCGTCTGGGCCACTCTCTACCGATGTG...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGATCCTCATTTCCAACATaGAGATCTGTGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGSSFPT*RSVCRG
Trigger: GCCTCTGCACACAGATCTCCATGTTGGAAATGAGGA...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAGTACCCCGAAGAAACTaGTGCAAGCCGTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLVPRRN*CKPSSL
Trigger: CAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTAC...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGTCCAGTTAGTCTTCTaGACAAATCTGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSVQLVF*TNLEAH
Trigger: GTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGAC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAGTGCAGAGGCTGAGCTaGTGTTCCAGCTTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLVQRLS*CSSFLA
Trigger: AGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCAC...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTATGTGGGGATGACACATaGAGAGAGGACATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLCGDDT*REDMLE
Trigger: CTCCAGCATGTCCTCTCTTCATGTGTCATCCCCACA...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGATCCGTCTTGGTAACCTaGATTCTCTCTCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGSVLVT*ILSLIK
Trigger: CTTGATCAGAGAGAGAATTCAGGTTACCAAGACGGA...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGGAACTCTTCCATCCTTaGCCCTTCCTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMELFHP*PFLTSS
Trigger: GGAGGAAGTGAGGAAGGGTCAAGGATGGAAGAGTTC...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTATGGAGGCACACGGAGTaGTTCAAACAATCGCCGGTA +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLWRHTE*FKQSPV
Trigger: TACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCA...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTACGTCGTCACTGTCACTaGAGCTGGCTATACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLRRHCH*SWLYCS
Trigger: GGAACAGTATAGCCAGCTCCAGTGACAGTGACGACG...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGCTATCGGTTTCATCTTaGCAGAGGCTCGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMLSVSS*QRLAGV
Trigger: CACACCAGCGAGCCTCTGCCAAGATGAAACCGATAG...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGGAAGTTGAGTTTAGCTaGAGGTTAACCCCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWEVEFS*RLTPCS
Trigger: TGAGCACGGGGTTAACCTCCAGCTAAACTCAACTTC...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCGGGGTGTCCATGGCCTaGCCTGTAGTAAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVGVSMA*PVVNPL
Trigger: CAGAGGGTTTACTACAGGCCAGGCCATGGACACCCC...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCACTGCAGTACCTGGGTaGGGTGTCCATGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCTAVPG*GVHGLA
Trigger: GGCCAGGCCATGGACACCCCACCCAGGTACTGCAGT...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGGCCAGGTGCTTGGCTTaGAGCCACCACACGCAACAG +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLARCLA*SHHTQQ
Trigger: CTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGTGGAAGGCACAGGTATaGTACTTTCTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWWKAQV*YFLTQV
Trigger: CACCTGAGTTAGAAAGTATCATACCTGTGCCTTCCA...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAACAGATGCAAAATGTTaGCACCCAAGAACACAGAGT +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGTDAKC*HPRTQS
Trigger: ACTCTGTGTTCTTGGGTGTCAACATTTTGCATCTGT...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTACAGACGGTCATCAACTaGGGTTTTATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLQTVIN*GFILCS
Trigger: GCTGCAGAGGATAAAACCTCAGTTGATGACCGTCTG...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTATCTGTGTGCAGAGGCTaGGCTGATGTTCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLSVCRG*ADVPAF
Trigger: AAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGA...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGGTCTCTGCCTCTAGATaGACAATCTGGAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWVSASR*TIWNFR
Trigger: TCTGAAGTTCCAGATTGTTCATCTAGAGGCAGAGAC...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCGGCCGTGATGGGAGCTaGCATGGAGGAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCGRDGS*HGGICS
Trigger: GCTGCAGATTCCTCCATGTCAGCTCCCATCACGGCC...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATCCAGTTTTCACAAGTaGTCTTATTGGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAESSFHK*SYWKAQ
Trigger: CTGTGCCTTCCAATAAGACCACTTGTGAAAACTGGA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGGTCCAGTTAGTCTTCTaGACAAATCTGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMVQLVF*TNLEAH
Trigger: GTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGAC...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAGGTGGGATCATTCAATaGGTAGAGCTTATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGGGIIQ*VELICD
Trigger: ATCACAAATAAGCTCTACTCATTGAATGATCCCACC...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATCTGATCAAGGCAGCTaGTGGACTTTCAATGTATTT +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAESDQGS*WTFNVF
Trigger: AAATACATTGAAAGTCCATCAGCTGCCTTGATCAGA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGACTTGGGACTTTGAGTTaGGTTGAGAATTACTACAAG +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGLGTLS*VENYYK
Trigger: CTTGTAGTAATTCTCAACTCAACTCAAAGTCCCAAG...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATCTGCAGTTATCATCTaGAATAATGGTGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAESAVII*NNGDLE
Trigger: TTCCAGGTCACCATTATTGCAGATGATAACTGCAGA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAAAAACTTTCTCTGGAGTaGCAAGTCATTACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEKLSLE*QVITWK
Trigger: TTTCCAGGTAATGACTTGGCACTCCAGAGAAAGTTT...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTGACCTGCATGCCAGGTaGTTGGCTTGGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGDLHAR*LAWSHH
Trigger: GTGGTGGCTCCAAGCCAAGCACCTGGCATGCAGGTC...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAACCCTTTTTCAAGGTTTaGATCATGCAAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEPFFKV*IMQNCP
Trigger: TGGACAGTTTTGCATGATCCAAACCTTGAAAAAGGG...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGGAGATCAAGTCTATATaGGAGGCTTCTTCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWEIKSI*EASSLE
Trigger: CTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTC...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTAGTGATAGGGAGAAATaGAGAAGATTCCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSSDREK*RRFQSV
Trigger: GACACTCTGGAATCTTCTCCATTTCTCCCTATCACT...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCAGGCAGTTTCTaGGACTTGTCTGGCCAACAA +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLKAGSF*DLSGQQ
Trigger: TTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTT...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS-3UTR TCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAACCTATGGCAGTTaGTTCTCTCAATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMKTYGS*FSQWAG
Trigger: TCCAGCCCATTGAGAGAATCAACTGCCATAGGTTTT...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGGCCGGTACATGCCACTaGGTTCCTTTTCAATCTTTA +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMAGTCH*VPFQSL
Trigger: TAAAGATTGAAAAGGAACTCAGTGGCATGTACCGGC...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGGTGCAGAGGCTGAGCTaGTGTTCCAGCTTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLVQRLS*CSSFLA
Trigger: AGCCAAAAAGCTGGAACATCAGCTCAGCCTCTGCAC...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTGTGGGGATGACACATaGAGAGAGGACATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLCGDDT*REDMLE
Trigger: CTCCAGCATGTCCTCTCTTCATGTGTCATCCCCACA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTCGCTGGTGTGGGGATaGCACATGAAGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLSLVWG*HMKRGH
Trigger: ATGTCCTCTCTTCATGTGTCATCCCCACACCAGCGA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCAGGTGGAGTTTGCAGTaGGCTGAGAATGTGCCACTA +
Preference number: 4 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVRWSLQ*AENVPL
Trigger: TAGTGGCACATTCTCAGCTCACTGCAAACTCCACCT...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTGCTGGCCAGACACACTaGCCAGTTACGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVAGQTH*PVTHFP
Trigger: TGGGAAATGCGTAACTGGTCAGTGTGTCTGGCCAGC...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATTGCAGACCATTTTCTaGACTTTGATCATTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAELQTIF*TLIIQL
Trigger: TAGCTGAATGATCAAAGTTCAGAAAATGGTCTGCAA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGGCAGAACCGAAGCAGTaGTTATGCCTCAGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWAEPKQ*LCLSLE
Trigger: CTCGAGGCTGAGGCATAATCACTGCTTCGGTTCTGC...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGCCCCGAAGAAACTGGTaGAAGCCGTCGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWPRRNW*KPSSLS
Trigger: TGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGG...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTGGGAAGGGCTGACCTaGATGCCAGGTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGWEGLT*MPGAWL
Trigger: AAGCCAAGCACCTGGCATGCAGGTCAGCCCTTCCCA...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGCACTGTCACTGGAGCTaGCTATACTGTTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMHCHWS*LYCSSF
Trigger: AAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTG...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGCGTCGTCACTGTCACTaGAGCTGGCTATACTGTTCC +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLRRHCH*SWLYCS
Trigger: GGAACAGTATAGCCAGCTCCAGTGACAGTGACGACG...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCGTACCCCGAAGAAACTaGTGCAAGCCGTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCVPRRN*CKPSSL
Trigger: CAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTAC...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGCTATCGGTTTCATCTTaGCAGAGGCTCGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLLSVSS*QRLAGV
Trigger: CACACCAGCGAGCCTCTGCCAAGATGAAACCGATAG...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGAATTTGGGGTTGTATATaGAGTAACTTTTGCAGACCA +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGIWGCI*SNFCRP
Trigger: TGGTCTGCAAAAGTTACTCCATATACAACCCCAAAT...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTACTGTATAATTCATTTTaGAAATTCCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLLYNSF*KFPAGP
Trigger: GGGACCAGCCGGGAATTTTCAAAATGAATTATACAG...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAACAGATGCAAAATGTTaGCACCCAAGAACACAGAGT +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLTDAKC*HPRTQS
Trigger: ACTCTGTGTTCTTGGGTGTCAACATTTTGCATCTGT...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCGAACTCTTCCATCCTTaGCCCTTCCTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCELFHP*PFLTSS
Trigger: GGAGGAAGTGAGGAAGGGTCAAGGATGGAAGAGTTC...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGTCTTATCTGCTTCTTTaGGATCAAGTCTATATGGGA +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWSYLLL*DQVYMG
Trigger: TCCCATATAGACTTGATCTCAAAGAAGCAGATAAGA...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGCAGTGGTGTGATCTGTaGTCACTGCAACCTCAACCT +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLQWCDL*SLQPQP
Trigger: AGGTTGAGGTTGCAGTGAGCACAGATCACACCACTG...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTTTGCCCAGGCTGGAGTaGAGTGGTGTGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSLPRLE*SGVICA
Trigger: AGCACAGATCACACCACTGCACTCCAGCCTGGGCAA...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp GCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTCTGGATGTAAATTAGTCTTATaGGCGTGTAAACTAAATGGG +
Preference number: 4 (lower is better)
Translates to: ARCLAWSHHTQQHETFSGCKLVL*ACKLNG
Trigger: CCCATTTAGTTTACACGCGCATAAGACTAATTTACA...TCCAGAGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTGGAGGCACACGGAGTaGTTCAAACAATCGCCGGTA +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWWRHTE*FKQSPV
Trigger: TACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCA...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGTACCCCGAAGAAACTaGTGCAAGCCGTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSVPRRN*CKPSSL
Trigger: CAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTAC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGACTTTCAATGTATTTaGAGATGCCGGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSDFQCI*RCRFKN
Trigger: GTTTTTGAACCGGCATCTCCAAATACATTGAAAGTC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCAGGCTGGAGTGCAGTaGTGTGATCTGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGQAGVQ*CDLCSL
Trigger: CAGTGAGCACAGATCACACCACTGCACTCCAGCCTG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTGCCAAGTCATTACCTaGAAACACTGGGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLCQVIT*KHWGQV
Trigger: GACCTGTCCCCAGTGTTTCCAGGTAATGACTTGGCA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTTTCTGGGACTTGTCTaGCCAACAACCCGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLFLGLV*PTTRSQ
Trigger: TTGGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS-3UTR TCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTATCTGATCAAGGCAGCTaGTGGACTTTCAATGTATTT +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLSDQGS*WTFNVF
Trigger: AAATACATTGAAAGTCCATCAGCTGCCTTGATCAGA...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGAACTCTTCCATCCTTaGCCCTTCCTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSELFHP*PFLTSS
Trigger: GGAGGAAGTGAGGAAGGGTCAAGGATGGAAGAGTTC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCAGCATGGCCAATCAATaGGCTTCATTCAACGGAGCG +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCSMANQ*ASFNGA
Trigger: CGCTCCGTTGAATGAAGCTCATTGATTGGCCATGCT...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGCATGAAGAGAGGACATaGTGGAGGTACCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWHEERT*WRYPEE
Trigger: TTCTTCGGGGTACCTCCAGCATGTCCTCTCTTCATG...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCCATGAAGAGAGGACATaGTGGAGGTACCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCHEERT*WRYPEE
Trigger: TTCTTCGGGGTACCTCCAGCATGTCCTCTCTTCATG...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAGTCATCATCATCTTCTaGTCCTTCTTCTATCGGTTT +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLVIIIF*SFFYRF
Trigger: AAACCGATAGAAGAAGGAGCAGAAGATGATGATGAC...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTAATCAAGGCCCTCACTaGAGTACCTGGGTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFNQGPH*STWVGC
Trigger: ACACCCCACCCAGGTACTGCAGTGAGGGCCTTGATT...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TTATGCCTCAGCCTCGAGCTCCCCGCACAGCATCCTACCATTCCAAATTCTTGGATTCTCTCAATGGGCTaGACTCTGTATAATTCATTT +
Preference number: 4 (lower is better)
Translates to: LCLSLELPAQHPTIPNSWILSMG*TLYNSF
Trigger: AAATGAATTATACAGAGTCCAGCCCATTGAGAGAAT...CCAAGAATTTGGAATGGTAGGATGCTGTGCGGGGAGCTCGAGGCTGAGGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGCCCTTTTTCAAGGTTTaGATCATGCAAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMPFFKV*IMQNCP
Trigger: TGGACAGTTTTGCATGATCCAAACCTTGAAAAAGGG...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGGCAATAATGGTGACCTaGAATTTTTCACCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMAIMVT*NFSPLC
Trigger: GCACAAAGGTGAAAAATTCCAGGTCACCATTATTGC...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTCCTCATTTCCAACATaGAGATCTGTGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLSSFPT*RSVCRG
Trigger: GCCTCTGCACACAGATCTCCATGTTGGAAATGAGGA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCGTCGTCACTGTCACTaGAGCTGGCTATACTGTTCC +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGRRHCH*SWLYCS
Trigger: GGAACAGTATAGCCAGCTCCAGTGACAGTGACGACG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGGAAGAGAGGACATGCTaGAGGTACCCCGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWEERTC*RYPEET
Trigger: AGTTTCTTCGGGGTACCTCCAGCATGTCCTCTCTTC...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCTATCGGTTTCATCTTaGCAGAGGCTCGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGLSVSS*QRLAGV
Trigger: CACACCAGCGAGCCTCTGCCAAGATGAAACCGATAG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTCAGACGGTCATCAACTaGGGTTTTATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSQTVIN*GFILCS
Trigger: GCTGCAGAGGATAAAACCTCAGTTGATGACCGTCTG...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGTTTGTGCATCTGAGTTaGTCTAAATTCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMFVHLS*SKFRRI
Trigger: GATTCTCCTGAATTTAGATCAACTCAGATGCACAAA...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTTCTGTGTGCAGAGGCTaGGCTGATGTTCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSSVCRG*ADVPAF
Trigger: AAAAGCTGGAACATCAGCTCAGCCTCTGCACACAGA...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTCGCTGGTGTGGGGATaGCACATGAAGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFSLVWG*HMKRGH
Trigger: ATGTCCTCTCTTCATGTGTCATCCCCACACCAGCGA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTCCGTCTTGGTAACCTaGATTCTCTCTCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLSVLVT*ILSLIK
Trigger: CTTGATCAGAGAGAGAATTCAGGTTACCAAGACGGA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCCCTAATTTAGCTACCTaGAGAGACTGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCPNLAT*RDCCSS
Trigger: ACTGCTGCAGCAGTCTCTTCAGGTAGCTAAATTAGG...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAAGATACGACAGATaGAAAATGTTGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLKRYDR*KMLTPK
Trigger: CTTGGGTGTCAACATTTTGCATCTGTCGTATCTTTT...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAGATACGACAGATaGAAAATGTTGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMKRYDR*KMLTPK
Trigger: CTTGGGTGTCAACATTTTGCATCTGTCGTATCTTTT...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCATGAAGAGAGGACATaGTGGAGGTACCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGHEERT*WRYPEE
Trigger: TTCTTCGGGGTACCTCCAGCATGTCCTCTCTTCATG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTCACAGTTACACCTGTaGTCTCAGGTACAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGSQLHL*SQVQGE
Trigger: TTCGCCCTGTACCTGAGAGCACAGGTGTAACTGTGA...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCTCCAGTTTTCACAAGTaGTCTTATTGGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVSSFHK*SYWKAQ
Trigger: CTGTGCCTTCCAATAAGACCACTTGTGAAAACTGGA...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTCACATCGGTAGAGAGTaGCCCAGACGATATAAAGGG +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSHIGRE*PRRYKG
Trigger: CCCTTTATATCGTCTGGGCCACTCTCTACCGATGTG...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCTCTTCTGAACAAATCTaGAGGCACACGGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCSSEQI*RHTEWF
Trigger: GAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGA...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCTCCTCATTTCCAACATaGAGATCTGTGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCSSFPT*RSVCRG
Trigger: GCCTCTGCACACAGATCTCCATGTTGGAAATGAGGA...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTAAAATGGTGAGGCCTTaGGGCTGCAACGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFKMVRP*GCNVAS
Trigger: AGATGCCACGTTGCAGCCCCAAGGCCTCACCATTTT...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCAAAACCTATGGCAGTTaGTTCTCTCAATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCKTYGS*FSQWAG
Trigger: TCCAGCCCATTGAGAGAATCAACTGCCATAGGTTTT...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCGCCGGTACATGCCACTaGGTTCCTTTTCAATCTTTA +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCAGTCH*VPFQSL
Trigger: TAAAGATTGAAAAGGAACTCAGTGGCATGTACCGGC...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGTCCAGTTAGTCTTCTaGACAAATCTGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSVQLVF*TNLEAH
Trigger: GTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGAC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTCAGACGGTCATCAACTaGGGTTTTATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFQTVIN*GFILCS
Trigger: GCTGCAGAGGATAAAACCTCAGTTGATGACCGTCTG...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTCTTCTGAACAAATCTaGAGGCACACGGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGSSEQI*RHTEWF
Trigger: GAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGA...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGCCGGTACATGCCACTaGGTTCCTTTTCAATCTTTA +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSAGTCH*VPFQSL
Trigger: TAAAGATTGAAAAGGAACTCAGTGGCATGTACCGGC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTTCCGTCTTGGTAACCTaGATTCTCTCTCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSSVLVT*ILSLIK
Trigger: CTTGATCAGAGAGAGAATTCAGGTTACCAAGACGGA...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCTTGGCTCAGTTCACCTaGGAACAACTTCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCLAQFT*EQLHLE
Trigger: TTCCAAATGAAGTTGTTCTCAGGTGAACTGAGCCAA...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCAAAAGATACGACAGATaGAAAATGTTGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVKRYDR*KMLTPK
Trigger: CTTGGGTGTCAACATTTTGCATCTGTCGTATCTTTT...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTCAAGGTTTGGATCATaGAAAACTGTCCAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLSRFGS*KTVQLV
Trigger: GACTAACTGGACAGTTTTGCATGATCCAAACCTTGA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTCTGCAGTTATCATCTaGAATAATGGTGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLSAVII*NNGDLE
Trigger: TTCCAGGTCACCATTATTGCAGATGATAACTGCAGA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGGTCATCATCATCTTCTaGTCCTTCTTCTATCGGTTT +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLVIIIF*SFFYRF
Trigger: AAACCGATAGAAGAAGGAGCAGAAGATGATGATGAC...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTCCCACCAGCCAAATaGCACTGTTTACTAAACCAT +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWFPPAK*HCLLNH
Trigger: ATGGTTTAGTAAACAGTGGCATTTGGCTGGTGGGAA...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTGAGGAAACCAAGGCATaGCAGGATCAAAGATATCTA +
Preference number: 4 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVEETKA*QDQRYL
Trigger: TAGATATCTTTGATCCTGGCATGCCTTGGTTTCCTC...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCCAGTTTTCACAAGTaGTCTTATTGGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWSSFHK*SYWKAQ
Trigger: CTGTGCCTTCCAATAAGACCACTTGTGAAAACTGGA...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTCTTCTGAACAAATCTaGAGGCACACGGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFSSEQI*RHTEWF
Trigger: GAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTCACTGTCACTGGAGCTaGCTATACTGTTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSHCHWS*LYCSSF
Trigger: AAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTG...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCACTGTCACTGGAGCTaGCTATACTGTTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGHCHWS*LYCSSF
Trigger: AAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTCAGGAAGCATCTTATTaGGAACTTTGGCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVQEASY*ELWQQT
Trigger: TGTTTGCTGCCAAAGTTCCCAATAAGATGCTTCCTG...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTAAAACCTATGGCAGTTaGTTCTCTCAATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFKTYGS*FSQWAG
Trigger: TCCAGCCCATTGAGAGAATCAACTGCCATAGGTTTT...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTACAGATGCAAAATGTTaGCACCCAAGAACACAGAGT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSTDAKC*HPRTQS
Trigger: ACTCTGTGTTCTTGGGTGTCAACATTTTGCATCTGT...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTAACGTAACAGGAGACTaGCTCAAAGTTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSNVTGD*LKVGSS
Trigger: ACTAGAACCAACTTTGAGTCAGTCTCCTGTTACGTT...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGCGAGAGAGTTCAACCTaGGAGAGCTTTATAATTTCA +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWRESST*ESFIIS
Trigger: TGAAATTATAAAGCTCTCTCAGGTTGAACTCTCTCG...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGGACTTTGAGTTGAGTTaGGAATTACTACAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWDFELS*ELLQEE
Trigger: CTCCTCTTGTAGTAATTCTCAACTCAACTCAAAGTC...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGCAATGTATTTGGAGATaGCGGTTCAAAAACGTCATC +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWQCIWR*RFKNVI
Trigger: GATGACGTTTTTGAACCGGCATCTCCAAATACATTG...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCTTTCGCACTTATTCATaGTTCAAAGCAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCFRTYS*FKAGSF
Trigger: GAAACTGCCTGCTTTGAAGCATGAATAAGTGCGAAA...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS-3UTR CCA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCGCAATAATGGTGACCTaGAATTTTTCACCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: STSLDALKQNNLKAMKKCAIMVT*NFSPLC
Trigger: GCACAAAGGTGAAAAATTCCAGGTCACCATTATTGC...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTTGTGCATCTGAGTTaGTCTAAATTCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWFVHLS*SKFRRI
Trigger: GATTCTCCTGAATTTAGATCAACTCAGATGCACAAA...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTGGTGGGATCATTCAATaGGTAGAGCTTATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGGGIIQ*VELICD
Trigger: ATCACAAATAAGCTCTACTCATTGAATGATCCCACC...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGGTGGGATCATTCAATaGGTAGAGCTTATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSGGIIQ*VELICD
Trigger: ATCACAAATAAGCTCTACTCATTGAATGATCCCACC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTTCTGATCAAGGCAGCTaGTGGACTTTCAATGTATTT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSSDQGS*WTFNVF
Trigger: AAATACATTGAAAGTCCATCAGCTGCCTTGATCAGA...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR TCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTGTTGGTTCTAGTGGATaGAGCAAAATAGACATGACC +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFVGSSG*SKIDMT
Trigger: GGTCATGTCTATTTTGCTTCATCCACTAGAACCAAC...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTTCTGCAGTTATCATCTaGAATAATGGTGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSSAVII*NNGDLE
Trigger: TTCCAGGTCACCATTATTGCAGATGATAACTGCAGA...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGTCATCATCATCTTCTaGTCCTTCTTCTATCGGTTT +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSVIIIF*SFFYRF
Trigger: AAACCGATAGAAGAAGGAGCAGAAGATGATGATGAC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTCAATGTATTTGGAGATaGCGGTTCAAAAACGTCATC +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGQCIWR*RFKNVI
Trigger: GATGACGTTTTTGAACCGGCATCTCCAAATACATTG...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR GCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTCCTCATGGTAAGAGTTaGTTCTTTTGGCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFPHGKS*FFWLSS
Trigger: TGAACTGAGCCAAAAGAAGCAACTCTTACCATGAGG...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CCA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGATTCTCTCAATGGGCTaGACTCTGTATAATTCATTT +
Preference number: 4 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLILSMG*TLYNSF
Trigger: AAATGAATTATACAGAGTCCAGCCCATTGAGAGAAT...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTGCAATAATGGTGACCTaGAATTTTTCACCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGAIMVT*NFSPLC
Trigger: GCACAAAGGTGAAAAATTCCAGGTCACCATTATTGC...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGGACTTTCAATGTATTTaGAGATGCCGGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWDFQCI*RCRFKN
Trigger: GTTTTTGAACCGGCATCTCCAAATACATTGAAAGTC...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTAAGAGTTGCTTCTTTTaGCTCAGTTCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFKSCFF*LSSPEN
Trigger: GTTCTCAGGTGAACTGAGCCAAAAGAAGCAACTCTT...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTTACAATCTTCACATTaGGACACTGATACACACACA +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGLQSSH*DTDTHT
Trigger: TGTGTGTGTATCAGTGTCTCAATGTGAAGATTGTAA...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR TCA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTCTGTATAATTCATTTTaGAAATTCCAAGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSLYNSF*KFQGAC
Trigger: GCAAGCCCCTTGGAATTTTCAAAATGAATTATACAG...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336775.9
CDS-3UTR GCA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTCAAGGTTTGGATCATaGAAAACTGTCCAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: LRELYNFKPRLSFTFASFSRFGS*KTVQLV
Trigger: GACTAACTGGACAGTTTTGCATGATCCAAACCTTGA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp TGCTTCTTTGAGATCAAGTCTATATGGGAGGCTTCTTCCTTAGAGGTGTGTGTTAAAGCCATGAAAAAGTaGTGGTATTTTTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: CFFEIKSIWEASSLEVCVKAMKK*WYFSGS
Trigger: AGATCCTGAAAAATACCAGCACTTTTTCATGGCTTT...AACACACACCTCTAAGGAAGAAGCCTCCCATATAGACTTGATCTCAAAGAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR GCA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGAAAGCCATGAAAAAGTaGTGGTATTTTTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWKAMKK*WYFSGS
Trigger: AGATCCTGAAAAATACCAGCACTTTTTCATGGCTTT...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CCA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTATTCTCTCAATGGGCTaGACTCTGTATAATTCATTT +
Preference number: 4 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGILSMG*TLYNSF
Trigger: AAATGAATTATACAGAGTCCAGCCCATTGAGAGAAT...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CCA 90 bp TCGCACTTATTCATGCTTCAAAGCAGGCAGTTTCTGGGACTTGTCTaGCCAACAACCCGTTCCCAAAGGCTCGGGGAAGGAGGTTGCGGG +
Preference number: 5 (lower is better)
Translates to: SHLFMLQSRQFLGLV*PTTRSQRLGEGGCG
Trigger: CCCGCAACCTCCTTCCCCGAGCCTTTGGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTTGAAGCATGAATAAGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS-3UTR CAA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGCTCGGGGAAGGAGGTaGCGGGTGGGTGGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSARGRR*RVGGAD
Trigger: GTCCGCGCCACCCACCCGCAACCTCCTTCCCCGAGC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CCA 90 bp TGGAGGTACCCCGAAGAAACTGGTGCAAGCCGTCGTCACTGTCACTaGAGCTGGCTATACTGTTCCTCATTTCCAACATGGAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: WRYPEETGASRRHCH*SWLYCSSFPTWRSV
Trigger: CACAGATCTCCATGTTGGAAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAAAATTCCAAGGGGCTaGCCGCCGCAGAGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLKIPRG*PPQSAG
Trigger: TCCCGCGCTCTGCGGCGGCAAGCCCCTTGGAATTTT...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336775.9
CDS-3UTR CAA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAGGCAGTTTCTGGGACTaGTCTGGCCAACAACCCGTT +
Preference number: 5 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLGSFWD*SGQQPV
Trigger: AACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCC...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CCA 90 bp TACCCCGAAGAAACTGGTGCAAGCCGTCGTCACTGTCACTGGAGCTaGCTATACTGTTCCTCATTTCCAACATGGAGATCTGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: YPEETGASRRHCHWS*LYCSSFPTWRSVCR
Trigger: TCTGCACACAGATCTCCATGTTGGAAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAACTCTGCAGCATAAGTTaGGCCCTTTTTCAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAELCSIS*ALFQGL
Trigger: CAAACCTTGAAAAAGGGCCAAACTTATGCTGCAGAG...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTATCTATCGGTTTCATCTaGGCAGAGGCTCGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: SLPPSDSTSLDALKQNNLSIGFI*AEARWC
Trigger: ACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGA...TAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGTCTATCGGTTTCATCTaGGCAGAGGCTCGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMSIGFI*AEARWC
Trigger: ACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGA...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATCACAAGTGGTCTTATaGGAAGGCACAGGTATGATA +
Preference number: 5 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAESQVVL*EGTGMI
Trigger: TATCATACCTGTGCCTTCCAATAAGACCACTTGTGA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTTGCCAGGTGCTTGGCTaGGAGCCACCACACGCAACA +
Preference number: 5 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGCQVLG*EPPHAT
Trigger: TGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCA...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CAA 90 bp CCCTTCCTCACTTCCTCCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATTTACCGGTCTCTTCTaGTATAAAAGATACGACAGA +
Preference number: 5 (lower is better)
Translates to: PFLTSSLRLHQSGCTKAEFTGLF*YKRYDR
Trigger: TCTGTCGTATCTTTTATACAAGAAGAGACCGGTAAA...TTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGGAGGAAGTGAGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CCCTCCGACTCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGCTCTGCAGCATAAGTTaGGCCCTTTTTCAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PSDSTSLDALKQNNLKAMLCSIS*ALFQGL
Trigger: CAAACCTTGAAAAAGGGCCAAACTTATGCTGCAGAG...CATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGAGTCGGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TGCATGCCAGGTGCTTGGCTTGGAGCCACCACACGCAACAGCATGAAACTTTCTGCTTTTAAAACAGGTTaGTTCCCAGCATTACAGAAA +
Preference number: 5 (lower is better)
Translates to: CMPGAWLGATTRNSMKLSAFKTG*FPALQK
Trigger: TTTCTGTAATGCTGGGAACAAACCTGTTTTAAAAGC...AGAAAGTTTCATGCTGTTGCGTGTGGTGGCTCCAAGCCAAGCACCTGGCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS TCA 90 bp CCTTTTTCAAGGTTTGGATCATGCAAAACTGTCCAGTTAGTCTTCTaGACAAATCTGGAGGCACACGGAGTGGTTCAAACAATCGCCGGT +
Preference number: 5 (lower is better)
Translates to: PFSRFGSCKTVQLVF*TNLEAHGVVQTIAG
Trigger: ACCGGCGATTGTTTGAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGACAGTTTTGCATGATCCAAACCTTGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CCA 90 bp ACACAGAGTTCCAGATCATTATATCCAAGGCACATCGGTAGAGAGTaGCCCAGACGATATAAAGGGTACATCCTAGAGTTAACATTCCCC +
Preference number: 5 (lower is better)
Translates to: TQSSRSLYPRHIGRE*PRRYKGYILELTFP
Trigger: GGGGAATGTTAACTCTAGGATGTACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGAACTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTTCTATCGGTTTCATCTaGGCAGAGGCTCGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSSIGFI*AEARWC
Trigger: ACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGA...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 90 bp ACCTTCCGTCTTGGTAACCTGAATTCTCTCTCTGATCAAGGCAGCTaGTGGACTTTCAATGTATTTGGAGATGCCGGTTCAAAAACGTCA +
Preference number: 5 (lower is better)
Translates to: TFRLGNLNSLSDQGS*WTFNVFGDAGSKTS
Trigger: TGACGTTTTTGAACCGGCATCTCCAAATACATTGAAAGTCCATCAGCTGCCTTGATCAGAGAGAGAATTCAGGTTACCAAGACGGAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp AAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGTCACAAGTGGTCTTATaGGAAGGCACAGGTATGATA +
Preference number: 5 (lower is better)
Translates to: KCWYFSGSLQDTFRLGNLSQVVL*EGTGMI
Trigger: TATCATACCTGTGCCTTCCAATAAGACCACTTGTGA...CAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGGCCCTTTTTCAAGGTTaGGATCATGCAAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: HEKVLVFFRISSRHLPSWALFQG*DHAKLS
Trigger: GGACAGTTTTGCATGATCCAAACCTTGAAAAAGGGC...CCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCCTCTGCAGCATAAGTTaGGCCCTTTTTCAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: STSLDALKQNNLKAMKKCLCSIS*ALFQGL
Trigger: CAAACCTTGAAAAAGGGCCAAACTTATGCTGCAGAG...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCGGACTTTCAATGTATTaGGAGATGCCGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVGLSMY*EMPVQK
Trigger: TTTTTGAACCGGCATCTCCAAATACATTGAAAGTCC...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS TCA 90 bp GGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTaGATTCTCTCTCTGATCAAGGCAGCTGATGGACTTTCAATGTAT +
Preference number: 5 (lower is better)
Translates to: GIFQDLFKTPSVLVT*ILSLIKAADGLSMY
Trigger: ATACATTGAAAGTCCATCAGCTGCCTTGATCAGAGAGAGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGACAGATGCAAAATGTaGACACCCAAGAACACAGAG +
Preference number: 5 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSDRCKM*TPKNTE
Trigger: CTCTGTGTTCTTGGGTGTCAACATTTTGCATCTGTC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTGCCCTTTTTCAAGGTTaGGATCATGCAAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGALFQG*DHAKLS
Trigger: GGACAGTTTTGCATGATCCAAACCTTGAAAAAGGGC...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp ATGAAAAAGTGCTGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTGAGACTGACTCAAAGTaGGTTCTAGTGGATGAAGCA +
Preference number: 5 (lower is better)
Translates to: MKKCWYFSGSLQDTFRLGETDSK*VLVDEA
Trigger: TGCTTCATCCACTAGAACCAACTTTGAGTCAGTCTC...ACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCAGCACTTTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CAA 90 bp TTCCCCAAAGATTTTTCCAGCAACCAAGTGACTCAGCAACCAAGTGACTCTGTCTTCTTATCTGCTTCTTaGAGATCAAGTCTATATGGG +
Preference number: 5 (lower is better)
Translates to: FPKDFSSNQVTQQPSDSVFLSAS*RSSLYG
Trigger: CCCATATAGACTTGATCTCAAAGAAGCAGATAAGAA...GACAGAGTCACTTGGTTGCTGAGTCACTTGGTTGCTGGAAAAATCTTTGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CAA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTGACAGATGCAAAATGTaGACACCCAAGAACACAGAG +
Preference number: 5 (lower is better)
Translates to: LRELYNFKPRLSFTFASFDRCKM*TPKNTE
Trigger: CTCTGTGTTCTTGGGTGTCAACATTTTGCATCTGTC...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CAA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCGGACTTTCAATGTATTaGGAGATGCCGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: STSLDALKQNNLKAMKKCGLSMY*EMPVQK
Trigger: TTTTTGAACCGGCATCTCCAAATACATTGAAAGTCC...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 90 bp TTACCGGTCTCTTCTTGTATAAAAGATACGACAGATGCAAAATGTTaGCACCCAAGAACACAGAGTTCCAGATCATTATATCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: LPVSSCIKDTTDAKC*HPRTQSSRSLYPRH
Trigger: GTGCCTTGGATATAATGATCTGGAACTCTGTGTTCTTGGGTGTCAACATTTTGCATCTGTCGTATCTTTTATACAAGAAGAGACCGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTCACAAGTGGTCTTATaGGAAGGCACAGGTATGATA +
Preference number: 5 (lower is better)
Translates to: LRELYNFKPRLSFTFASFSQVVL*EGTGMI
Trigger: TATCATACCTGTGCCTTCCAATAAGACCACTTGTGA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS-3UTR CAA 90 bp TCCACCAGTCTGGATGCACTAAAGCAGAATAACCTAAAAGCCATGAAAAAGTGCTTTACCGGTCTCTTCTaGTATAAAAGATACGACAGA +
Preference number: 5 (lower is better)
Translates to: STSLDALKQNNLKAMKKCFTGLF*YKRYDR
Trigger: TCTGTCGTATCTTTTATACAAGAAGAGACCGGTAAA...GCACTTTTTCATGGCTTTTAGGTTATTCTGCTTTAGTGCATCCAGACTGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp TGGTATTTTTCAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTGAATTCTGGACTTTCAATGTATTaGGAGATGCCGGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: WYFSGSLQDTFRLGNLNSGLSMY*EMPVQK
Trigger: TTTTTGAACCGGCATCTCCAAATACATTGAAAGTCC...AGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTGAAAAATACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 90 bp TGCAATAATGGTGACCTGGAATTTTTCACCTTTGTGCATCTGAGTTaGTCTAAATTCAGGAGAATCTATAAAGGCACAGGGGTAAATGTT +
Preference number: 5 (lower is better)
Translates to: CNNGDLEFFTFVHLS*SKFRRIYKGTGVNV
Trigger: AACATTTACCCCTGTGCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACCATTATTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS-3UTR CAA 90 bp CTGAGAGAGCTTTATAATTTCAAGCCTAGGCTGTCATTCACCTTTGCTTCATTTTTTACCGGTCTCTTCTaGTATAAAAGATACGACAGA +
Preference number: 5 (lower is better)
Translates to: LRELYNFKPRLSFTFASFFTGLF*YKRYDR
Trigger: TCTGTCGTATCTTTTATACAAGAAGAGACCGGTAAA...AAATGAAGCAAAGGTGAATGACAGCCTAGGCTTGAAATTATAAAGCTCTCTCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314641.10
CDS CCA 72 bp ACCCGTTCCCAAAGGCTCGGGGAAGGAGGTTGCGGGTaGGTGGCGCGGACCTCGGGTCCCCAGCCATCGGCG +
Preference number: 6 (lower is better)
Translates to: TRSQRLGEGGCG*VARTSGPQPSA
Trigger: CGCCGATGGCTGGGGACCCGAGGTCCGCGCCACCCACCCGCAACCTCCTTCCCCGAGCCTTTGGGAACGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CCA 72 bp GTTCCCAAAGGCTCGGGGAAGGAGGTTGCGGGTGGGTaGCGCGGACCTCGGGTCCCCAGCCATCGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: VPKGSGKEVAGG*RGPRVPSHRRS
Trigger: AGAGCGCCGATGGCTGGGGACCCGAGGTCCGCGCCACCCACCCGCAACCTCCTTCCCCGAGCCTTTGGGAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CAA 72 bp GCCAACAACCCGTTCCCAAAGGCTCGGGGAAGGAGGTaGCGGGTGGGTGGCGCGGACCTCGGGTCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: ANNPFPKARGRR*RVGGADLGSPA
Trigger: GGCTGGGGACCCGAGGTCCGCGCCACCCACCCGCAACCTCCTTCCCCGAGCCTTTGGGAACGGGTTGTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CAA 90 bp ACTTGTCTGGCCAACAACCCGTTCCCAAAGGCTCGGGGAAGGAGGTaGCGGGTGGGTGGCGCGGACCTCGGGTCCCCAGCCATCGGCGCT +
Preference number: 6 (lower is better)
Translates to: TCLANNPFPKARGRR*RVGGADLGSPAIGA
Trigger: AGCGCCGATGGCTGGGGACCCGAGGTCCGCGCCACCCACCCGCAACCTCCTTCCCCGAGCCTTTGGGAACGGGTTGTTGGCCAGACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS GCA 72 bp AGAGAGGACATGCTGGAGGTACCCCGAAGAAACTGGTaGAAGCCGTCGTCACTGTCACTGGAGCTGGCTATA +
Preference number: 6 (lower is better)
Translates to: REDMLEVPRRNW*KPSSLSLELAI
Trigger: TATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTCTTCGGGGTACCTCCAGCATGTCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CCA 72 bp TTCATGCTTCAAAGCAGGCAGTTTCTGGGACTTGTCTaGCCAACAACCCGTTCCCAAAGGCTCGGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: FMLQSRQFLGLV*PTTRSQRLGEG
Trigger: TCCTTCCCCGAGCCTTTGGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTTGAAGCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CCA 72 bp CCCGAAGAAACTGGTGCAAGCCGTCGTCACTGTCACTaGAGCTGGCTATACTGTTCCTCATTTCCAACATGG +
Preference number: 6 (lower is better)
Translates to: PEETGASRRHCH*SWLYCSSFPTW
Trigger: CCATGTTGGAAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTCTTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CAA 72 bp ACTTATTCATGCTTCAAAGCAGGCAGTTTCTGGGACTaGTCTGGCCAACAACCCGTTCCCAAAGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: TYSCFKAGSFWD*SGQQPVPKGSG
Trigger: CCCCGAGCCTTTGGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTTGAAGCATGAATAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CAA 90 bp TCTTTTCGCACTTATTCATGCTTCAAAGCAGGCAGTTTCTGGGACTaGTCTGGCCAACAACCCGTTCCCAAAGGCTCGGGGAAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: SFRTYSCFKAGSFWD*SGQQPVPKGSGKEV
Trigger: AACCTCCTTCCCCGAGCCTTTGGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTTGAAGCATGAATAAGTGCGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS CCA 72 bp GAAACTGGTGCAAGCCGTCGTCACTGTCACTGGAGCTaGCTATACTGTTCCTCATTTCCAACATGGAGATCT +
Preference number: 6 (lower is better)
Translates to: ETGASRRHCHWS*LYCSSFPTWRS
Trigger: AGATCTCCATGTTGGAAATGAGGAACAGTATAGCCAGCTCCAGTGACAGTGACGACGGCTTGCACCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CCA 72 bp CATCATCTTCTGCTCCTTCTTCTATCGGTTTCATCTTaGCAGAGGCTCGCTGGTGTGGGGATGACACATGAA +
Preference number: 6 (lower is better)
Translates to: HHLLLLLLSVSS*QRLAGVGMTHE
Trigger: TTCATGTGTCATCCCCACACCAGCGAGCCTCTGCCAAGATGAAACCGATAGAAGAAGGAGCAGAAGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CCA 72 bp TTTCGCACTTATTCATGCTTCAAAGCAGGCAGTTTCTaGGACTTGTCTGGCCAACAACCCGTTCCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: FRTYSCFKAGSF*DLSGQQPVPKG
Trigger: GCCTTTGGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTTGAAGCATGAATAAGTGCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446408.2
CDS TCA 72 bp CACGGAGTGGTTCAAACAATCGCCGGTACATGCCACTaGGTTCCTTTTCAATCTTTACCGGTCTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: HGVVQTIAGTCH*VPFQSLPVSSC
Trigger: ACAAGAAGAGACCGGTAAAGATTGAAAAGGAACTCAGTGGCATGTACCGGCGATTGTTTGAACCACTCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 72 bp CAGGATCTCTTCAAGACACCTTCCGTCTTGGTAACCTaGATTCTCTCTCTGATCAAGGCAGCTGATGGACTT +
Preference number: 6 (lower is better)
Translates to: QDLFKTPSVLVT*ILSLIKAADGL
Trigger: AAGTCCATCAGCTGCCTTGATCAGAGAGAGAATTCAGGTTACCAAGACGGAAGGTGTCTTGAAGAGATCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 72 bp AGGTTTGGATCATGCAAAACTGTCCAGTTAGTCTTCTaGACAAATCTGGAGGCACACGGAGTGGTTCAAACA +
Preference number: 6 (lower is better)
Translates to: RFGSCKTVQLVF*TNLEAHGVVQT
Trigger: TGTTTGAACCACTCCGTGTGCCTCCAGATTTGTTCAGAAGACTAACTGGACAGTTTTGCATGATCCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 72 bp CTTGGTAACCTGAATTCTCTCTCTGATCAAGGCAGCTaGTGGACTTTCAATGTATTTGGAGATGCCGGTTCA +
Preference number: 6 (lower is better)
Translates to: LGNLNSLSDQGS*WTFNVFGDAGS
Trigger: TGAACCGGCATCTCCAAATACATTGAAAGTCCATCAGCTGCCTTGATCAGAGAGAGAATTCAGGTTACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS GCA 72 bp TCAAGGCAGCTGATGGACTTTCAATGTATTTGGAGATaGCGGTTCAAAAACGTCATCATCATCTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SRQLMDFQCIWR*RFKNVIIIFCS
Trigger: GGAGCAGAAGATGATGATGACGTTTTTGAACCGGCATCTCCAAATACATTGAAAGTCCATCAGCTGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CCA 72 bp TCCAGATCATTATATCCAAGGCACATCGGTAGAGAGTaGCCCAGACGATATAAAGGGTACATCCTAGAGTTA +
Preference number: 6 (lower is better)
Translates to: SRSLYPRHIGRE*PRRYKGYILEL
Trigger: TAACTCTAGGATGTACCCTTTATATCGTCTGGGCCACTCTCTACCGATGTGCCTTGGATATAATGATCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 72 bp TTTTCCCTTCAAGAGAATACTCAGACGGTCATCAACTaGGGTTTTATCCTCTGCAGCATAAGTTTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: FSLQENTQTVIN*GFILCSISLAL
Trigger: AAGGGCCAAACTTATGCTGCAGAGGATAAAACCTCAGTTGATGACCGTCTGAGTATTCTCTTGAAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS TCA 72 bp GGTGACCTGGAATTTTTCACCTTTGTGCATCTGAGTTaGTCTAAATTCAGGAGAATCTATAAAGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: GDLEFFTFVHLS*SKFRRIYKGTG
Trigger: CCCTGTGCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAAAGGTGAAAAATTCCAGGTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2
CDS CAA 72 bp TCTCTGATCAAGGCAGCTGATGGACTTTCAATGTATTaGGAGATGCCGGTTCAAAAACGTCATCATCATCTT +
Preference number: 6 (lower is better)
Translates to: SLIKAADGLSMY*EMPVQKRHHHL
Trigger: AAGATGATGATGACGTTTTTGAACCGGCATCTCCAAATACATTGAAAGTCCATCAGCTGCCTTGATCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314641.10
ENST00000336775.9
ENST00000446408.2