RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BUD23 (Homo sapiens)

Ensembl gene IDs: ENSG00000071462

Ensembl transcript IDs: ENST00000265758.7, ENST00000421304.5, ENST00000421744.5, ENST00000423497.5, ENST00000428163.5, ENST00000430270.5, ENST00000430446.2, ENST00000432522.5, ENST00000436944.5, ENST00000441822.5, ENST00000442099.1, ENST00000463307.5, ENST00000464615.1, ENST00000471215.1, ENST00000478670.5, ENST00000487006.2, ENST00000496153.5

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCAGACTCTGGGCTGGGCCCAGGGACACACCCACCTAAGGCTTTaGCGAGGGAGGGCTCCACTCTGGATGGGCACTGCCCCTCACCTC +
Preference number: 1 (lower is better)
Translates to: CQTLGWAQGHTHLRL*RGRAPLWMGTAPHL
Trigger: GAGGTGAGGGGCAGTGCCCATCCAGAGTGGAGCCCTCCCTCGCCAAAGCCTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp ACTCAGCAGCTACTTGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTaGGCCCAGGGACACACCCACCTAAGGCTTTGGCGAGGGAGGGCT +
Preference number: 1 (lower is better)
Translates to: TQQLLGKARWCQTLG*AQGHTHLRLWRGRA
Trigger: AGCCCTCCCTCGCCAAAGCCTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 90 bp CGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCCTCCGCTaGCCTGAGGATCCGGAAGACACAGGTGCGGCCACGGAGTCTAGG +
Preference number: 1 (lower is better)
Translates to: RAVHRARGRPEPLLR*PEDPEDTGAATESR
Trigger: CCTAGACTCCGTGGCCGCACCTGTGTCTTCCGGATCCTCAGGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTTGCTCGATGGACTGCTCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp GGCGTCATGTGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTaGTGCCAGACTCTGGGCTGGGCCCAGGGACACACCCACCTAAGG +
Preference number: 1 (lower is better)
Translates to: GVMCPFTQQLLGKAR*CQTLGWAQGHTHLR
Trigger: CCTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp AGAAGGAGACAGCCTGCCAGGCGTGGCAAGGGGAAGGGGCATGTGTaGGCTCACAAAGGGAGTCCAGGCTGCATGGCTGCACCCAGACAT +
Preference number: 1 (lower is better)
Translates to: RRRQPARRGKGKGHV*AHKGSPGCMAAPRH
Trigger: ATGTCTGGGTGCAGCCATGCAGCCTGGACTCCCTTTGTGAGCCCACACATGCCCCTTCCCCTTGCCACGCCTGGCAGGCTGTCTCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR CCA 90 bp CGGCAAAGGTGGACTCAAGACCCCTGTCTCCTGATGCCTCCCAGTTaGACTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGT +
Preference number: 1 (lower is better)
Translates to: RQRWTQDPCLLMPPS*THFRRRPAAPPLIR
Trigger: ACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAGGGGTCTTGAGTCCACCTTTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp CCTCCATCTCGGGCCCCCAGCACTCCACGCTGTCCAGAAAGTTTGTaGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGACTACCGCG +
Preference number: 1 (lower is better)
Translates to: PPSRAPSTPRCPESL*RSCRSTTPRSPTTA
Trigger: CGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGACATGACCTCCACAAACTTTCTGGACAGCGTGGAGTGCTGGGGGCCCGAGATGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 90 bp TTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTCCCTaGAGGATGTGGCACACAGGTGTTCGAGGCAGGCTTGGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: FGHFCVHVKPGRGAP*RMWHTGVRGRLGAA
Trigger: GGCAGCCCCAAGCCTGCCTCGAACACCTGTGTGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 90 bp GTCATGTGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTaGCAGACTCTGGGCTGGGCCCAGGGACACACCCACCTAAGGCTT +
Preference number: 1 (lower is better)
Translates to: VMCPFTQQLLGKARW*QTLGWAQGHTHLRL
Trigger: AAGCCTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 90 bp GGGGGTGCGCCGGATCTTGCTTTCCTTTCTGAGGGTGGCGTCATGTaGCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTGCCAG +
Preference number: 1 (lower is better)
Translates to: GGAPDLAFLSEGGVM*PFTQQLLGKARWCQ
Trigger: CTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCCTCAGAAAGGAAAGCAAGATCCGGCGCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp GCGGCCAGCGGCTCCTCCTCTTATCCGTGGGCCCTTTTCCTCTCCTaGAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGG +
Preference number: 1 (lower is better)
Translates to: AASGSSSYPWALFLS*RTFGHFCVHVKPGR
Trigger: CCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGAGAGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 90 bp GGAGAAGCTCCTCCCTGCCCTGTACCTCATCTGAGGAACTGGAAGTaGGAGCCTACAGAACGAGGGATGGCAAGGTACGTGCTGGGCACC +
Preference number: 1 (lower is better)
Translates to: GEAPPCPVPHLRNWK*EPTERGMARYVLGT
Trigger: GGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTCACTTCCAGTTCCTCAGATGAGGTACAGGGCAGGGAGGAGCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR GCA 90 bp GAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTaGTCCCTGAAGGATGTGGCACACAGGTGTTCGAGGCAGGCTTGG +
Preference number: 1 (lower is better)
Translates to: EDIWPFLCSREAGQG*SLKDVAHRCSRQAW
Trigger: CCAAGCCTGCCTCGAACACCTGTGTGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp GGGTGGCCGGAGCTACCAGACCTCACACACACGCAGAGCTTGGAGTaGGTGTGCATTTACACACATGCACACACCACACAGCGTCACAGC +
Preference number: 1 (lower is better)
Translates to: GWPELPDLTHTQSLE*VCIYTHAHTTQRHS
Trigger: GCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGCACACCCACTCCAAGCTCTGCGTGTGTGTGAGGTCTGGTAGCTCCGGCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp AGAAGTGGCCAGTACTTCCTGGTCTCTTGCAGAAGCCCGGTATTCTaGGTGAACAGACACGTGCACCCCATGAGTGCCAAGGCCTCGGGG +
Preference number: 1 (lower is better)
Translates to: RSGQYFLVSCRSPVF*VNRHVHPMSAKASG
Trigger: CCCCGAGGCCTTGGCACTCATGGGGTGCACGTGTCTGTTCACCCAGAATACCGGGCTTCTGCAAGAGACCAGGAAGTACTGGCCACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 90 bp CCCTTTTCCTCTCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTaGAGCCGGGCAGGGGTGCTCCCTGAAGGATGTGGCACACAGGTG +
Preference number: 1 (lower is better)
Translates to: PFSSPGGHLAISVFT*SRAGVLPEGCGTQV
Trigger: CACCTGTGTGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGAGAGGAAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 90 bp GGAACTGGAAGTGAGAGCCTACAGAACGAGGGATGGCAAGGTACGTaGTGGGCACCCTCAACACACTGCCAAGATAGGTGGCACTACCCC +
Preference number: 1 (lower is better)
Translates to: GTGSESLQNEGWQGT*WAPSTHCQDRWHYP
Trigger: GGGGTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTCACTTCCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR CCA 90 bp TTGGACTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGTaGGCCCTTTTCCTCTCCTGGAGGACATTTGGCCATTTCTGTGTT +
Preference number: 1 (lower is better)
Translates to: LDSLSPAASGSSSYP*ALFLSWRTFGHFCV
Trigger: AACACAGAAATGGCCAAATGTCCTCCAGGAGAGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 90 bp CTCCACTCTGGATGGGCACTGCCCCTCACCTCTGCTAAAGAGGGTTaGAGAAGTGGCCAGTACTTCCTGGTCTCTTGCAGAAGCCCGGTA +
Preference number: 1 (lower is better)
Translates to: LHSGWALPLTSAKEG*RSGQYFLVSCRSPV
Trigger: TACCGGGCTTCTGCAAGAGACCAGGAAGTACTGGCCACTTCTTCAACCCTCTTTAGCAGAGGTGAGGGGCAGTGCCCATCCAGAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 90 bp CCGGAGCTACCAGACCTCACACACACGCAGAGCTTGGAGTGGGTGTaGATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: PELPDLTHTQSLEWV*IYTHAHTTQRHSWK
Trigger: CTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGCACACCCACTCCAAGCTCTGCGTGTGTGTGAGGTCTGGTAGCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 90 bp ACTGGAAGTGAGAGCCTACAGAACGAGGGATGGCAAGGTACGTGCTaGGCACCCTCAACACACTGCCAAGATAGGTGGCACTACCCCTAC +
Preference number: 1 (lower is better)
Translates to: TGSESLQNEGWQGTC*APSTHCQDRWHYPY
Trigger: GTAGGGGTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTCACTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR TCA 90 bp AATATAGAAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTaGCTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTGT +
Preference number: 1 (lower is better)
Translates to: NIEKCRGKCLSRTAW*LRSGACACGRCTGC
Trigger: ACACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTTCTATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
3UTR TCA 90 bp CATGGCAGGGCTGATATCCAGGCCCACCCAATAGTGCCCTTCATCTaGCAGATAACTTCCACTCAGCCCAGTGCCACAGCCAATATCCAG +
Preference number: 1 (lower is better)
Translates to: HGRADIQAHPIVPFI*QITSTQPSATANIQ
Trigger: CTGGATATTGGCTGTGGCACTGGGCTGAGTGGAAGTTATCTGTCAGATGAAGGGCACTATTGGGTGGGCCTGGATATCAGCCCTGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR CCA 90 bp CCCAGTGCCACAGCCAATATCCAGCAGGTAACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAATGCTCGCCCAGCCATCCTGGTCTG +
Preference number: 1 (lower is better)
Translates to: PSATANIQQVTGLIL*QIKKLQCSPSHPGL
Trigger: CAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGTTACCTGCTGGATATTGGCTGTGGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR TCA 90 bp CCTGATGTTTCTACCGTCACCTTGGTGTCCCTGCTGCATGTGACCTaGGAGGCTTGGGTGAGGGCAGAGAGAAAGTCCATGTCTAACAAA +
Preference number: 1 (lower is better)
Translates to: PDVSTVTLVSLLHVT*EAWVRAERKSMSNK
Trigger: TTTGTTAGACATGGACTTTCTCTCTGCCCTCACCCAAGCCTCTCAGGTCACATGCAGCAGGGACACCAAGGTGACGGTAGAAACATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR TCA 90 bp CACCCTCAACACACTGCCAAGATAGGTGGCACTACCCCTACTTTTTaGATAGCTGAGGAATGGATGCTCAGGTCATTCAACTTACCCACA +
Preference number: 1 (lower is better)
Translates to: HPQHTAKIGGTTPTF*IAEEWMLRSFNLPT
Trigger: TGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAGCTATTCAAAAAGTAGGGGTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR TCA 90 bp ACACACTGCCAAGATAGGTGGCACTACCCCTACTTTTTGAATAGCTaGGGAATGGATGCTCAGGTCATTCAACTTACCCACATTTACTTT +
Preference number: 1 (lower is better)
Translates to: THCQDRWHYPYFLNS*GMDAQVIQLTHIYF
Trigger: AAAGTAAATGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAGCTATTCAAAAAGTAGGGGTAGTGCCACCTATCTTGGCAGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR-3UTR GCA 90 bp TACTTGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTGGGCCCAGGGACACACCCCGGGGCCACATGCCCTaGAGGAGGGGCCACCTGGCT +
Preference number: 2 (lower is better)
Translates to: YLARPVGARLWAGPRDTPRGHMP*RRGHLA
Trigger: AGCCAGGTGGCCCCTCCTGCAGGGCATGTGGCCCCG...GGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR GCA 90 bp TACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGAGGCAGGCTTGGGGCTaGCCTGGCGCCTGTGCCGCT +
Preference number: 2 (lower is better)
Translates to: YNATQSDYRERCKGRIQRRQAWG*PGACAA
Trigger: AGCGGCACAGGCGCCAGGGCAGCCCCAAGCCTGCCT...CCTCTGGATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CCA 90 bp CCTGAGTCTCTGGGTCGGTCCCCGCAGGGCCTGACCCCTGCACCTCCATCTCGGCTCCCCGAAGAGGGCTaGGCTCAGTGTGACCCCACT +
Preference number: 2 (lower is better)
Translates to: PESLGRSPQGLTPAPPSRLPEEG*AQCDPT
Trigger: AGTGGGGTCACACTGAGCCCAGCCCTCTTCGGGGAG...CCGAGATGGAGGTGCAGGGGTCAGGCCCTGCGGGGACCGACCCAGAGACTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 90 bp GTGCCAGACTCTGGGCTGGGCCCAGGGACACACCCACCTAAGGCTTaGGCGAGGGAGGGCTCCACTCTGGATGGGCACTGCCCCTCACCT +
Preference number: 2 (lower is better)
Translates to: VPDSGLGPGTHPPKA*AREGSTLDGHCPSP
Trigger: AGGTGAGGGGCAGTGCCCATCCAGAGTGGAGCCCTCCCTCGCCAAAGCCTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 90 bp GCTGAACTCCCCGAAGAGGGCTGGGCTCAGTGTGACCCCACTCGCTaGCAGCCGGCAGGACCACGACCAGTGAGGAGCTGGAGGACATGC +
Preference number: 2 (lower is better)
Translates to: AELPEEGWAQCDPTR*QPAGPRPVRSWRTC
Trigger: GCATGTCCTCCAGCTCCTCACTGGTCGTGGTCCTGCCGGCTGCAAGCGAGTGGGGTCACACTGAGCCCAGCCCTCTTCGGGGAGTTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR TCA 90 bp CATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTCTGTAGGCCCCTCCTCGCAGCTGGAGATCAGTaGGCTGGGGGTGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: HAHTTQRHSWKGFCRPLLAAGDQ*AGGGAW
Trigger: CCAGGCCCCACCCCCAGCTCACTGATCTCCAGCTGC...GAGGAGGGGCCTACAGAAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 90 bp GCGGCAAAGGTGGACTCAAGACCCCTGTCTCCTGATGCCTCCCAGTaGGACTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCG +
Preference number: 2 (lower is better)
Translates to: AAKVDSRPLSPDASQ*DSLSPAASGSSSYP
Trigger: CGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAGGGGTCTTGAGTCCACCTTTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR GCA 90 bp CGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGAAGCCGGGCAGGGGTaGTCCCTGAAGGATGTGGCA +
Preference number: 2 (lower is better)
Translates to: RSFFSSTHARLFLTIPRLEAGQG*SLKDVA
Trigger: TGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTC...GAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CCA 90 bp GTATTCTGGGTGAACAGACACGTGCACCCCATGAGTGCCAAGGCCTCGGGGCCATGTTCGAGGCAGGCTTaGGGCTGCCCTGGCGCCTGT +
Preference number: 2 (lower is better)
Translates to: VFWVNRHVHPMSAKASGPCSRQA*GCPGAC
Trigger: ACAGGCGCCAGGGCAGCCCCAAGCCTGCCTCGAACA...TGGCCCCGAGGCCTTGGCACTCATGGGGTGCACGTGTCTGTTCACCCAGAATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 90 bp TGGCGTCATGTGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTaGGTGCCAGACTCTGGGCTGGGCCCAGGGACACACCCACCTAAG +
Preference number: 2 (lower is better)
Translates to: WRHVPIHSAATWQGP*VPDSGLGPGTHPPK
Trigger: CTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 90 bp TCCTTTCTGAGGGTGGCGTCATGTGCCCATTCACTCAGCAGCTACTaGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTGGGCCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: SFLRVASCAHSLSSY*ARPVGARLWAGPRD
Trigger: GTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCCTCAGAAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR TCA 90 bp GGGTGGCGTCATGTGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTGGCTCCTCCGCTGACCTaGGGATCCGGAAGACACAGG +
Preference number: 2 (lower is better)
Translates to: GWRHVPIHSAATWQGPLVAPPLT*GSGRHR
Trigger: CCTGTGTCTTCCGGATCCTCAGGTCAGCGGAGGAGC...CACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CCA 90 bp GGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTGGAGGAGTCCAGGCTGCATaGCTGCACCCAGACATCCAG +
Preference number: 2 (lower is better)
Translates to: GRKGEPQHPRERVPDAGGGVQAA*LHPDIQ
Trigger: CTGGATGTCTGGGTGCAGCCATGCAGCCTGGACTCC...TCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR CAA 90 bp GCACCTCCATCTCGGGCCCCCAGCACTCCACGCTGTCCAGAAAGTTaGTGGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGACTACC +
Preference number: 2 (lower is better)
Translates to: APPSRAPSTPRCPES*WRSCRSTTPRSPTT
Trigger: GGTAGTCGGACTGCGTGGCGTTGTACTCCGACATGACCTCCACAAACTTTCTGGACAGCGTGGAGTGCTGGGGGCCCGAGATGGAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR GCA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGAAGTGCAGAGGCAAGTaGCTTTCCAGAACCGCGTGG +
Preference number: 2 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLKCRGK*LSRTAW
Trigger: CCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTT...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
3UTR-3UTR CCA 90 bp GGGCTTGCGCTTGCGGCCGGTGTACTGGGTGTCAGGTCTGACTTCCCTGCCCTGTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: GLALAAGVLGVRSDFPALFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...CAGGGCAGGGAAGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
3UTR-3UTR TCA 90 bp GCCCTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTGGGAAAACACCAGGCTaGGGTCACATAAATGTCAGC +
Preference number: 2 (lower is better)
Translates to: ALAPVPLLLLQHPCPTLPGKTPG*GHINVS
Trigger: GCTGACATTTATGTGACCTCAGCCTGGTGTTTTCCC...AGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR GCA 90 bp ATGCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: MQEGRESHSTQGRGSQMQGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...CTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR-3UTR CCA 90 bp CTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGTGGGCCCTTTTCCTTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: LTFAGGQRLLLLSVGPFPFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...AGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CCA 90 bp GCCCTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTACCATCAAATGTGCCTaGCTTGAATGGGATGCCCTG +
Preference number: 2 (lower is better)
Translates to: ALAPVPLLLLQHPCPTLPTIKCA*LEWDAL
Trigger: CAGGGCATCCCATTCAAGCCAGGCACATTTGATGGT...AGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR-3UTR TCA 90 bp GCCCTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: ALAPVPLLLLQHPCPTLPGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...AGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
3UTR-3UTR TCA 90 bp GAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTGGAGGGCAGCATCGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: ESHSTQGRGSQMQVEGSIGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...GATGCTGCCCTCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR-3UTR TCA 90 bp GAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTGGAGGGCAGCATCTTTACCTCTCATTGGTaGACACAGACTCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: ESHSTQGRGSQMQVEGSIFTSHW*TQTPWV
Trigger: AACCCAGGGAGTCTGTGTTCACCAATGAGAGGTAAA...GATGCTGCCCTCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR-3UTR TCA 90 bp CTAAAGAGGGTTGAAGAAGTGGCCAGTACTTCCTGGTCTCTTGCAGAAGCCCGGCCATCCCTCCTGCCATaGCCCCCTCACCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: LKRVEEVASTSWSLAEARPSLLP*PPHHVP
Trigger: GGGAACATGGTGAGGGGGTCATGGCAGGAGGGATGG...CCGGGCTTCTGCAAGAGACCAGGAAGTACTGGCCACTTCTTCAACCCTCTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR TCA 90 bp CTAAAGAGGGTTGAAGAAGTGGCCAGTACTTCCTGGTCTCTTGCAGAAGCCCGGGCCCAATGCTGCTGCTaGACTCCCCGAAGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LKRVEEVASTSWSLAEARAQCCC*TPRRGL
Trigger: CAGCCCTCTTCGGGGAGTTCAGCAGCAGCATTGGGC...CCGGGCTTCTGCAAGAGACCAGGAAGTACTGGCCACTTCTTCAACCCTCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR GCA 90 bp CCTGAGTCTCTGGGTCGGTCCCCGCAGGGCCTGACCCCTGCACCTCCATCTCGGGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 2 (lower is better)
Translates to: PESLGRSPQGLTPAPPSREVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...CCGAGATGGAGGTGCAGGGGTCAGGCCCTGCGGGGACCGACCCAGAGACTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CCA 90 bp TGCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGCAGGCACAGTCCAAATaGGACCTGATGTTTCTACCG +
Preference number: 2 (lower is better)
Translates to: CRKEGRATAPKGEGPRCRQAQSK*DLMFLP
Trigger: CGGTAGAAACATCAGGTCCCATTTGGACTGTGCCTG...CCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR-3UTR GCA 90 bp GCATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTCTGTAGAGTCTGCTGCTGAGTaGGTGGCTCAAGGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: AFTHMHTPHSVTAGRASVESAAE*VAQGCC
Trigger: GCAGCAGCCTTGAGCCACGCACTCAGCAGCAGACTC...TACAGAAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CCA 90 bp CATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTCTGTAGGCCCCTCCTCGGTCTGGACAGTATTTaGACACAGACCCCTTGTAAG +
Preference number: 2 (lower is better)
Translates to: HAHTTQRHSWKGFCRPLLGLDSI*TQTPCK
Trigger: CTTACAAGGGGTCTGTGTCCAAATACTGTCCAGACC...GAGGAGGGGCCTACAGAAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR GCA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGAACAATATAGAAAAGTaGAGAGGCAAGTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLNNIEK*RGKCLS
Trigger: GGAAAGGCACTTGCCTCTGCACTTTTCTATATTGTT...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
3UTR-3UTR GCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 2 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
3UTR-3UTR GCA 90 bp ATGCAACCATCAAATGTGCCTGGCTTGAATGGGATGCCCTGGCCCATATCCCCCATAAAGAAGCTCCAATaGTCGCCCAGCCATCCTGGT +
Preference number: 2 (lower is better)
Translates to: MQPSNVPGLNGMPWPISPIKKLQ*SPSHPG
Trigger: ACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTAT...GGGGGATATGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR-3UTR GCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAATCCAGGCTGCATGGCTaGACCCAGACATCCAGGACC +
Preference number: 2 (lower is better)
Translates to: EFLCFGTVRVVYHHATGESRLHG*TQTSRT
Trigger: GGTCCTGGATGTCTGGGTGCAGCCATGCAGCCTGGA...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR-3UTR GCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: EFLCFGTVRVVYHHATGEGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
3UTR-3UTR GCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
3UTR-3UTR GCA 90 bp CAGAGAGAAAGTCCATGTCTAACAAATGTGGCAGCCCCCGCTGCAGCCGGGGCAGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 2 (lower is better)
Translates to: QRESPCLTNVAAPAAAGAEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...TGCCCCGGCTGCAGCGGGGGCTGCCACATTTGTTAGACATGGACTTTCTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR-3UTR CCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAATTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: EFLCFGTVRVVYHHATGEFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
3UTR-3UTR CCA 90 bp ATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: MPDSSSPFPASTSLMGTSTGLIL*QIKKLQ
Trigger: TTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGT...AGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR-3UTR GCA 90 bp CTGAGGAATGGATGCTCAGGTCATTCAACTTACCCACATTTACTTTTAGGACATGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 2 (lower is better)
Translates to: LRNGCSGHSTYPHLLLGHATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...ATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR-3UTR GCA 90 bp AGACTTCTTGTTAGCATTACAGAGCCACTGCACAGCAGAAATGCTGATGCAACCTTCCACTCAGCCCAGTaGCACAGCCAATATCCAGCA +
Preference number: 2 (lower is better)
Translates to: RLLVSITEPLHSRNADATFHSAQ*HSQYPA
Trigger: TGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAA...GGTTGCATCAGCATTTCTGCTGTGCAGTGGCTCTGTAATGCTAACAAGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR-3UTR TCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAATTAGGACATGTCGTTTaGAGACACCAGTGTAAGGAC +
Preference number: 2 (lower is better)
Translates to: EFLCFGTVRVVYHHATGELGHVV*RHQCKD
Trigger: GTCCTTACACTGGTGTCTTCAAACGACATGTCCTAA...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR-3UTR GCA 90 bp AGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACAAGTGCAGAGGCAAGTaGCTTTCCAGAACCGCGTGG +
Preference number: 2 (lower is better)
Translates to: RKQAEVEFLCFGTVRVVYKCRGK*LSRTAW
Trigger: CCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTT...GTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
3UTR-3UTR CCA 90 bp CTGAGGAATGGATGCTCAGGTCATTCAACTTACCCACATTTACTTTTAGGACATCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: LRNGCSGHSTYPHLLLGHPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...ATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR-3UTR GCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 2 (lower is better)
Translates to: EFLCFGTVRVVYHHATGEEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
3UTR-3UTR CCA 90 bp ATGCTCAGGTCATTCAACTTACCCACATTTACTTTTAGGACATGTCGTTTGAAGTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: MLRSFNLPTFTFRTCRLKFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...CTTCAAACGACATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR GCA 72 bp CCCGAGTCTGCTGCTGAGTGCGTGGCTCAAGGCTGCTaGTTAGTTAGGGGCCCGAGGCGGGTGGCCCGAGGC +
Preference number: 3 (lower is better)
Translates to: PESAAECVAQGC*LVRGPRRVARG
Trigger: GCCTCGGGCCACCCGCCTCGGGCCCCTAACTAAGCAGCAGCCTTGAGCCACGCACTCAGCAGCAGACTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp GGGCCCGAGTCTGCTGCTGAGTGCGTGGCTCAAGGCTaGTGCTTAGTTAGGGGCCCGAGGCGGGTGGCCCGA +
Preference number: 3 (lower is better)
Translates to: GPESAAECVAQG*CLVRGPRRVAR
Trigger: TCGGGCCACCCGCCTCGGGCCCCTAACTAAGCAGCAGCCTTGAGCCACGCACTCAGCAGCAGACTCGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp CTGGGCTGGGCCCAGGGACACACCCACCTAAGGCTTTaGCGAGGGAGGGCTCCACTCTGGATGGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: LGWAQGHTHLRL*RGRAPLWMGTA
Trigger: GGCAGTGCCCATCCAGAGTGGAGCCCTCCCTCGCCAAAGCCTTAGGTGGGTGTGTCCCTGGGCCCAGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp GGGCCCAATGCTGCTGCTGAACTCCCCGAAGAGGGCTaGGCTCAGTGTGACCCCACTCGCTTGCAGCCGGCA +
Preference number: 3 (lower is better)
Translates to: GPNAAAELPEEG*AQCDPTRLQPA
Trigger: TGCCGGCTGCAAGCGAGTGGGGTCACACTGAGCCCAGCCCTCTTCGGGGAGTTCAGCAGCAGCATTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp CTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATaGCCGACTCTTCCTCACCATTCCCCGCCTCGACAT +
Preference number: 3 (lower is better)
Translates to: LAPVPLLLLQHP*PTLPHHSPPRH
Trigger: ATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
3UTR GCA 72 bp AGCTGGAAGGGCTTCTGTAGGCCCCTCCTCCATCGGTaGCTGGCACTGATCCCACCAGCCACAGGCCACACA +
Preference number: 3 (lower is better)
Translates to: SWKGFCRPLLHR*LALIPPATGHT
Trigger: TGTGTGGCCTGTGGCTGGTGGGATCAGTGCCAGGCACCGATGGAGGAGGGGCCTACAGAAGCCCTTCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp GGTATTCTGGGTGAACAGACACGTGCACCCCATGAGTaGCAAGGCCTCGGGGCCACATGCCCTGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: GILGEQTRAPHE*QGLGATCPAGG
Trigger: CCCTCCTGCAGGGCATGTGGCCCCGAGGCCTTGGCACTCATGGGGTGCACGTGTCTGTTCACCCAGAATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp CCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTaGCAGACTCTGGGCTGGGCCCAGGGACACACCCAC +
Preference number: 3 (lower is better)
Translates to: PFTQQLLGKARW*QTLGWAQGHTH
Trigger: GTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp TGGACTCAAGACCCCTGTCTCCTGATGCCTCCCAGTTaGACTCACTTTCGCCGGCGGCCAGCGGCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: WTQDPCLLMPPS*THFRRRPAAPP
Trigger: AGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAGGGGTCTTGAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp TGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTaGTGCCAGACTCTGGGCTGGGCCCAGGGACACACC +
Preference number: 3 (lower is better)
Translates to: CPFTQQLLGKAR*CQTLGWAQGHT
Trigger: GGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp GGGTGGCGTCATGTGCCCATTCACTCAGCAGCTACTTaGCAAGGCCCGTTGGTGCCAGACTCTGGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: GWRHVPIHSAAT*QGPLVPDSGLG
Trigger: GCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 72 bp GTCAGCGGCAAAGGTGGACTCAAGACCCCTGTCTCCTaGTGCCTCCCAGTTGGACTCACTTTCGCCGGCGGC +
Preference number: 3 (lower is better)
Translates to: VSGKGGLKTPVS*CLPVGLTFAGG
Trigger: GCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAGGGGTCTTGAGTCCACCTTTGCCGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 72 bp AAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTaGCTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGT +
Preference number: 3 (lower is better)
Translates to: KCRGKCLSRTAW*LRSGACACGRC
Trigger: ACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
3UTR CCA 72 bp GGCATGTGTGGGCTCACAAAGGGAGTCCAGGCTGCATaGCTGCACCCAGACATCCAGGACCCCAAACCCCTA +
Preference number: 3 (lower is better)
Translates to: GMCGLTKGVQAA*LHPDIQDPKPL
Trigger: TAGGGGTTTGGGGTCCTGGATGTCTGGGTGCAGCCATGCAGCCTGGACTCCCTTTGTGAGCCCACACATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR CCA 72 bp GCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTaGAGGGCAGCATCAGAAAAGAAGGAGACAGCCTGC +
Preference number: 3 (lower is better)
Translates to: ATAPKGEGPRCR*RAASEKKETAC
Trigger: GCAGGCTGTCTCCTTCTTTTCTGATGCTGCCCTCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR TCA 72 bp TTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTCCCTaGAGGATGTGGCACACAGGTGTTCGAGGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: FCVHVKPGRGAP*RMWHTGVRGRL
Trigger: AAGCCTGCCTCGAACACCTGTGTGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTCACGTGAACACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp TGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTaGTCCCTGAAGGATGTGGCACACAGGTGTTCGAGG +
Preference number: 3 (lower is better)
Translates to: WPFLCSREAGQG*SLKDVAHRCSR
Trigger: CCTCGAACACCTGTGTGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp GCTTTGGCGAGGGAGGGCTCCACTCTGGATGGGCACTaGCCCTCACCTCTGCTAAAGAGGGTTGAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: ALAREGSTLDGH*PSPLLKRVEEV
Trigger: CACTTCTTCAACCCTCTTTAGCAGAGGTGAGGGGCAGTGCCCATCCAGAGTGGAGCCCTCCCTCGCCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CAA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGAAGTTTCATTATGTaGCCCAGGCAGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLGSFIM*PRQVSN
Trigger: GTTTGAGACCTGCCTGGGCAACATAATGAAACTTCC...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430446.2
ENST00000442099.1
3UTR TCA 72 bp TCTCTCGGTCCACAGCCTCATCCAGCATGGCAGGGCTaGTATCCAGGCCCACCCAATAGTGCCCTTCATCTG +
Preference number: 3 (lower is better)
Translates to: SLGPQPHPAWQG*YPGPPNSALHL
Trigger: CAGATGAAGGGCACTATTGGGTGGGCCTGGATATCAGCCCTGCCATGCTGGATGAGGCTGTGGACCGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR TCA 72 bp TCTCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTaGAGCCGGGCAGGGGTGCTCCCTGAAGGATGTGGC +
Preference number: 3 (lower is better)
Translates to: SPGGHLAISVFT*SRAGVLPEGCG
Trigger: GCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp GAGAGCCTACAGAACGAGGGATGGCAAGGTACGTGCTaGGCACCCTCAACACACTGCCAAGATAGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: ESLQNEGWQGTC*APSTHCQDRWH
Trigger: GTGCCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR-3UTR CAA 90 bp GCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTAATGGGAACCTCTCATaGGTGAACACAGACTCCCTG +
Preference number: 3 (lower is better)
Translates to: AHSLSSYLARPVGARLWANGNLS*VNTDSL
Trigger: CAGGGAGTCTGTGTTCACCAATGAGAGGTTCCCATT...AGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR TCA 72 bp TCTACCGTCACCTTGGTGTCCCTGCTGCATGTGACCTaGGAGGCTTGGGTGAGGGCAGAGAGAAAGTCCATG +
Preference number: 3 (lower is better)
Translates to: STVTLVSLLHVT*EAWVRAERKSM
Trigger: CATGGACTTTCTCTCTGCCCTCACCCAAGCCTCTCAGGTCACATGCAGCAGGGACACCAAGGTGACGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR TCA 72 bp CCCCTAGCCCCAAACAGGCACAGTCCAAATGGGACCTaGTGTTTCTACCGTCACCTTGGTGTCCCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: PLAPNRHSPNGT*CFYRHLGVPAA
Trigger: TGCAGCAGGGACACCAAGGTGACGGTAGAAACATCAGGTCCCATTTGGACTGTGCCTGTTTGGGGCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
3UTR TCA 72 bp CCTGCCATGACCCCCTCACCATGTTCCCTACGTCCATaGCCCCTAGTGCTGGGTCTGGACAGTATTTGGACA +
Preference number: 3 (lower is better)
Translates to: PAMTPSPCSLRP*PLVLGLDSIWT
Trigger: TGTCCAAATACTGTCCAGACCCAGCACTAGGGGTCATGGACGTAGGGAACATGGTGAGGGGGTCATGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR GCA 72 bp GTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGTGATCAGCTCCAACTG +
Preference number: 3 (lower is better)
Translates to: VRVVYHHATGEA*LCGLGCDQLQL
Trigger: CAGTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421744.5
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
3UTR GCA 72 bp AGTGAGAGCCTACAGAACGAGGGATGGCAAGGTACGTaGTGGGCACCCTCAACACACTGCCAAGATAGGTGG +
Preference number: 3 (lower is better)
Translates to: SESLQNEGWQGT*WAPSTHCQDRW
Trigger: CCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR GCA 72 bp CCGGATCTTGCTTTCCTTTCTGAGGGTGGCGTCATGTaGCCATTCACTCAGCAGCTACTTGGCAAGGCCCGT +
Preference number: 3 (lower is better)
Translates to: PDLAFLSEGGVM*PFTQQLLGKAR
Trigger: ACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCCTCAGAAAGGAAAGCAAGATCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp ACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAACTGCTCTGAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: TTMPPEKPAFVA*VVISSNCSEFS
Trigger: TGAGAACTCAGAGCAGTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR CCA 72 bp TTATCCGTGGGCCCTTTTCCTCTCCTGGAGGACATTTaGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: LSVGPFPLLEDI*PFLCSREAGQG
Trigger: CCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGAGAGGAAAAGGGCCCACGGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR-3UTR CAA 90 bp CGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGGGTTTTCAGACTTCTaGTTAGCATTACAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: RSFFSSTHARLFLTIPRLGFSDF*LALQSH
Trigger: GTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCC...GAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR TCA 72 bp GCTGATATCCAGGCCCACCCAATAGTGCCCTTCATCTaGCAGATAACTTCCACTCAGCCCAGTGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: ADIQAHPIVPFI*QITSTQPSATA
Trigger: GGCTGTGGCACTGGGCTGAGTGGAAGTTATCTGTCAGATGAAGGGCACTATTGGGTGGGCCTGGATATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR GCA 72 bp CCAGACCTCACACACACGCAGAGCTTGGAGTGGGTGTaGATTTACACACATGCACACACCACACAGCGTCAC +
Preference number: 3 (lower is better)
Translates to: PDLTHTQSLEWV*IYTHAHTTQRH
Trigger: GTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGCACACCCACTCCAAGCTCTGCGTGTGTGTGAGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp CAGTACTTCCTGGTCTCTTGCAGAAGCCCGGTATTCTaGGTGAACAGACACGTGCACCCCATGAGTGCCAAG +
Preference number: 3 (lower is better)
Translates to: QYFLVSCRSPVF*VNRHVHPMSAK
Trigger: CTTGGCACTCATGGGGTGCACGTGTCTGTTCACCCAGAATACCGGGCTTCTGCAAGAGACCAGGAAGTACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CCA 72 bp CACAGCAGAAATGCTGATGCAACCATCAAATGTGCCTaGCTTGAATGGGATGCCCTGGCCCATATCCCCCAG +
Preference number: 3 (lower is better)
Translates to: HSRNADATIKCA*LEWDALAHIPQ
Trigger: CTGGGGGATATGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCATCAGCATTTCTGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR CCA 72 bp GCAGATAAAGAAGCTCCAATGCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCCGTGAGCTCAACGCTG +
Preference number: 3 (lower is better)
Translates to: ADKEAPMLAQPS*SGYQSSVSSTL
Trigger: CAGCGTTGAGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR CCA 72 bp ACAGCCAATATCCAGCAGGTAACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAATGCTCGCCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: TANIQQVTGLIL*QIKKLQCSPSH
Trigger: ATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGTTACCTGCTGGATATTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR TCA 72 bp CACACTGCCAAGATAGGTGGCACTACCCCTACTTTTTaGATAGCTGAGGAATGGATGCTCAGGTCATTCAAC +
Preference number: 3 (lower is better)
Translates to: HTAKIGGTTPTF*IAEEWMLRSFN
Trigger: GTTGAATGACCTGAGCATCCATTCCTCAGCTATTCAAAAAGTAGGGGTAGTGCCACCTATCTTGGCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421744.5
3UTR GCA 72 bp GGGTTTTCAGACTTCTTGTTAGCATTACAGAGCCACTaGACAGCAGAAATGCTGATGCAACCATCAAATGTG +
Preference number: 3 (lower is better)
Translates to: GFSDFLLALQSH*TAEMLMQPSNV
Trigger: CACATTTGATGGTTGCATCAGCATTTCTGCTGTGCAGTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430270.5
3UTR TCA 72 bp TCAACTTACCCACATTTACTTTTAGGACATGTCGTTTaGAGACACCAGTGTAAGGACAAGAAGGATCCTCTC +
Preference number: 3 (lower is better)
Translates to: STYPHLLLGHVV*RHQCKDKKDPL
Trigger: GAGAGGATCCTTCTTGTCCTTACACTGGTGTCTTCAAACGACATGTCCTAAAAGTAAATGTGGGTAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR GCA 90 bp GAGTCTGCTGCTGAGTGCGTGGCTCAAGGCTGCTGCTTAGTTAGGGGCCCGAGGGGCCTCGGGGCCACATaGCCTGCAGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ESAAECVAQGCCLVRGPRGLGAT*PAGGAT
Trigger: GGTGGCCCCTCCTGCAGGGCATGTGGCCCCGAGGCC...CCTCGGGCCCCTAACTAAGCAGCAGCCTTGAGCCACGCACTCAGCAGCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGTGGGCCCTTTTCCTGGGCACCTGAGTCTCTaGGTCGGTCCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTFAGGQRLLLLSVGPFPGHLSL*VGPRRA
Trigger: GGCCCTGCGGGGACCGACCCAGAGACTCAGGTGCCC...AGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp CCTGAGTCTCTGGGTCGGTCCCCGCAGGGCCTGACCCCTGCACCTCCATCTCGGCAGGACCACGACCAGTaGGGAGCTGGAGGACATGCT +
Preference number: 4 (lower is better)
Translates to: PESLGRSPQGLTPAPPSRQDHDQ*GAGGHA
Trigger: AGCATGTCCTCCAGCTCCTCACTGGTCGTGGTCCTG...CCGAGATGGAGGTGCAGGGGTCAGGCCCTGCGGGGACCGACCCAGAGACTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp GAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTACTGGGTGTCAGGTCTaGCTTCCCTGCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: EPRGDLEAGLALAAGVLGTGCQV*LPCPGA
Trigger: GGCGCCAGGGCAGGGAAGTCAGACCTGACACCCAGT...ACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp GCTGACCTGAGGATCCGGAAGACACAGGTGCGGCCACGGAGTCTAGGATGGGCGGTGACCCCACTCGCTTaGAGCCGGCAGGACCACGAC +
Preference number: 4 (lower is better)
Translates to: ADLRIRKTQVRPRSLGWAVTPLA*SRQDHD
Trigger: GTCGTGGTCCTGCCGGCTGCAAGCGAGTGGGGTCAC...CGCCCATCCTAGACTCCGTGGCCGCACCTGTGTCTTCCGGATCCTCAGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTGGCTTGGGGCTGCCCTaGCGCCTGTGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLQHPCPTLPHHSPPRHPGLGLP*RLCRSF
Trigger: GAAGGAGCGGCACAGGCGCCAGGGCAGCCCCAAGCC...AGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp GCCCTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTGGGCTCCACTCTGGATaGGCACTGCCCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: ALAPVPLLLLQHPCPTLPGLHSG*ALPLTS
Trigger: AGAGGTGAGGGGCAGTGCCCATCCAGAGTGGAGCCC...AGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 72 bp GTGGACTCAAGACCCCTGTCTCCTGATGCCTCCCAGTaGGACTCACTTTCGCCGGCGGCCAGCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDSRPLSPDASQ*DSLSPAASGSS
Trigger: GGAGGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAGGGGTCTTGAGTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp GGGCTTGCGCTTGCGGCCGGTGTACTGGGTGTCAGGTCTGACTTCCCTGCCCTGTCCAGAACCGCGTGGTaGCTTAGAAGCGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GLALAAGVLGVRSDFPALSRTAW*LRSGAC
Trigger: GCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGA...CAGGGCAGGGAAGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR TCA 90 bp GCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAGGAGGGGCGGGGGCCTaGGGCGGCTGCTGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: APMPDSSSPFPASTSLMGGGAGA*GGCCVK
Trigger: CTTAACACAGCAGCCGCCTCAGGCCCCCGCCCCTCC...TCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGAGCAAGAGGAAGGCCTaGACCGCTCCTCCGCTGACC +
Preference number: 4 (lower is better)
Translates to: YNATQSDYRERCKGRIQRSKRKA*TAPPLT
Trigger: GGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTTGCT...CCTCTGGATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp CATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTCTGTAGGCCCCTCCTCGACACGTGCACCCCATaGGTGCCAAGGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HAHTTQRHSWKGFCRPLLDTCTP*VPRPRG
Trigger: GCCCCGAGGCCTTGGCACTCATGGGGTGCACGTGTC...GAGGAGGGGCCTACAGAAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGCAACAGGGGCAACTTaGCGCTTCCCGACCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAATGAT*RFPTPG
Trigger: TCCGGGGGTCGGGAAGCGGCAAGTTGCCCCTGTTGC...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp GCTGACCTGAGGATCCGGAAGACACAGGTGCGGCCACGGAGTCTAGGATGGGCGGACTACCGCGAGCGCTaGAAAGGCCGCATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ADLRIRKTQVRPRSLGWADYRER*KGRIQR
Trigger: CCTCTGGATGCGGCCTTTGCAGCGCTCGCGGTAGTC...CGCCCATCCTAGACTCCGTGGCCGCACCTGTGTCTTCCGGATCCTCAGGTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGCTCGCCCTGAGGGGGTaGGCCGGATCTTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: YNATQSDYRERCKGRIQRLALRG*AGSCFP
Trigger: AGGAAAGCAAGATCCGGCGCACCCCCTCAGGGCGAG...CCTCTGGATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTGTCAGGTCTGACTTCCCTGCCCTTGAATGGGATGCCCTaGCCCATATCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGLRLRPVYWVSGLTSLPLNGMP*PISPSS
Trigger: GCTGCTGGGGGATATGGGCCAGGGCATCCCATTCAA...GGGCAGGGAAGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CCA 90 bp CAGAGAGAAAGTCCATGTCTAACAAATGTGGCAGCCCCCGCTGCAGCCGGGGCACAGCACACCTGCGACTaGCGCCTGCCGGCACCCGGT +
Preference number: 4 (lower is better)
Translates to: QRESPCLTNVAAPAAAGAQHTCD*RLPAPG
Trigger: ACCGGGTGCCGGCAGGCGCCAGTCGCAGGTGTGCTG...TGCCCCGGCTGCAGCGGGGGCTGCCACATTTGTTAGACATGGACTTTCTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp CTGTCTCCTGATGCCTCCCAGTTGGACTCACTTTCGCCGGCGGCCAGCGGCTCCAGCTGGAGGACATGCTaGAGAGTGGGAACCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LSPDASQLDSLSPAASGSSWRTC*RVGTPP
Trigger: TGGCGGGGTTCCCACTCTCCAGCATGTCCTCCAGCT...GGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 72 bp GTGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTaGGTGCCAGACTCTGGGCTGGGCCCAGGGACACAC +
Preference number: 4 (lower is better)
Translates to: VPIHSAATWQGP*VPDSGLGPGTH
Trigger: GTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TCGGAGTACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCGCCCGGTATTCTGGGTaGACAGACACGTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SEYNATQSDYRERCKGRIARYSG*TDTCTP
Trigger: TGGGGTGCACGTGTCTGTTCACCCAGAATACCGGGC...GATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGCTTAGAAGCGGGGCTTaGGCTTGCGGCCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLLRSGA*ACGRCT
Trigger: AGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAG...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR CCA 90 bp CTGTCTCCTGATGCCTCCCAGTTGGACTCACTTTCGCCGGCGGCCAGCGGCTCCCGACCAGTGAGGAGCTaGAGGACATGCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSPDASQLDSLSPAASGSRPVRS*RTCWRV
Trigger: CACTCTCCAGCATGTCCTCCAGCTCCTCACTGGTCG...GGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: CRSFFSSTHARLFLTIPRATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...GCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR GCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp GAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EPRGDLEAGLALAAGVLGGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...ACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp GCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCGAAGCCGGGCAGGGGTaGTCCCTGAAGGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: ACAAPSSPAPMPDSSSPFEAGQG*SLKDVA
Trigger: TGCCACATCCTTCAGGGAGCACCCCTGCCCGGCTTC...GAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCGCAGGGCCTGACCCCTaGACCTCCATCTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACAGPDP*TSISGP
Trigger: GGGGCCCGAGATGGAGGTGCAGGGGTCAGGCCCTGC...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGTTGCGGCCGGTGTACTaGGTGTCAGGTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLLRPVY*VSGLTS
Trigger: GGAAGTCAGACCTGACACCCAGTACACCGGCCGCAA...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
3UTR CAA 72 bp AGGGTGGCGTCATGTGCCCATTCACTCAGCAGCTACTaGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RVASCAHSLSSY*ARPVGARLWAG
Trigger: CCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCGAACCGCTCCTCCGCTaGCCTGAGGATCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: FFSSTHARLFLTIPRLDIEPLLR*PEDPED
Trigger: GTCTTCCGGATCCTCAGGTCAGCGGAGGAGCGGTTC...GATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CTGTCTCCTGATGCCTCCCAGTTGGACTCACTTTCGCCGGCGGCCAGCGGCTCCTTCCACTCAGCCCAGTaGCACAGCCAATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPDASQLDSLSPAASGSFHSAQ*HSQYPA
Trigger: TGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAA...GGAGCCGCTGGCCGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGGAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp GAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTAAGTGCAGAGGCAAGTaGCTTTCCAGAACCGCGTGG +
Preference number: 4 (lower is better)
Translates to: EPRGDLEAGLALAAGVLGKCRGK*LSRTAW
Trigger: CCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTT...ACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp CCCCGCTGCAGCCGGGGCAGGCTTCAGCAGTTGCTTTACCTCTCATTGGTGAACGGAGAGGGTCCCAGATaGAGGTGGAGGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PRCSRGRLQQLLYLSLVNGEGPR*RWRAAS
Trigger: TGATGCTGCCCTCCACCTGCATCTGGGACCCTCTCC...GTTCACCAATGAGAGGTAAAGCAACTGCTGAAGCCTGCCCCGGCTGCAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp GCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGACCCCTCCTCCATCGGTaGCTGGCACTGATCCCACCA +
Preference number: 4 (lower is better)
Translates to: APMPDSSSPFPASTSLMGPLLHR*LALIPP
Trigger: TGGTGGGATCAGTGCCAGGCACCGATGGAGGAGGGG...TCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp ATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTGGCAAGGCCCGTTGGTaGCAGACTCTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MPDSSSPFPASTSLMGTSGKARW*QTLGWA
Trigger: GGCCCAGCCCAGAGTCTGGCACCAACGGGCCTTGCC...AGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGTGGGCCCTTTTCCTCGAGGGTGGCGTCATGTaGCCATTCACTCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SLSPAASGSSSYPWALFLEGGVM*PFTQQL
Trigger: TAGCTGCTGAGTGAATGGGCACATGACGCCACCCTC...GAGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTGTCAGGTCTGACTTCCCTGCCCAGCAGTACAGGCGCTTaGCAGGGTTTTCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: RGLRLRPVYWVSGLTSLPSSTGA*QGFQTS
Trigger: AGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCT...GGGCAGGGAAGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CCA 90 bp GCCCTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALAPVPLLLLQHPCPTLPFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...AGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR CCA 90 bp CGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCTTGCGGCCGGTGTACTaGGTGTCAGGTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RSFFSSTHARLFLTIPRLLRPVY*VSGLTS
Trigger: GGAAGTCAGACCTGACACCCAGTACACCGGCCGCAA...GAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR TCA 90 bp ATGCTCGCCCAGCCATCCTGGTCTGGATATCAATCATCCGTGAGCTCAACGCTGACTGGGTGTCAGGTCTaGCTTCCCTGCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: MLAQPSWSGYQSSVSSTLTGCQV*LPCPGA
Trigger: GGCGCCAGGGCAGGGAAGTCAGACCTGACACCCAGT...CAGCGTTGAGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR TCA 90 bp GCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTCCAGGAGAGTCAAGATaGGGATGCAGGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGRKGEPQHPRERVPDAGPGESR*GCRKEG
Trigger: CCCTTCCTTCCTGCATCCTCATCTTGACTCTCCTGG...ACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR TCA 90 bp ATGCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTGTGCCGACAGCAGTaGCCCAGGAGAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: MQEGRESHSTQGRGSQMQVCRQQ*PRRVKM
Trigger: CATCTTGACTCTCCTGGGTCACTGCTGTCGGCACAC...CTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR TCA 90 bp TCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTCCATCCCTCCTGCCATaGCCCCCTCACCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: SWRTFGHFCVHVKPGRGAPSLLP*PPHHVP
Trigger: GGGAACATGGTGAGGGGGTCATGGCAGGAGGGATGG...AGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGCAGCTGGAGATCAGTaGGCTGGGGGTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FGTVRVVYHHATGEACLCAAGDQ*AGGGAW
Trigger: CCAGGCCCCACCCCCAGCTCACTGATCTCCAGCTGC...ACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp CTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTGAAGGGGCCTGGTTATaGCTTAGCAGCCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLQHPCPTLPHHSPPRHPEGAWL*LSSHLC
Trigger: GCACAGGTGGCTGCTAAGTCATAACCAGGCCCCTTC...AGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLQHPCPTLPHHSPPRHPGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...AGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR GCA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGAGCGGGGCTTGCGCTTaGGGCCGGTGTACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGSGACA*GRCTGC
Trigger: ACACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCT...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp TTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAGAAGCGGGGCTTaGGCTTGCGGCCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: FFSSTHARLFLTIPRLDILRSGA*ACGRCT
Trigger: AGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAG...GATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR GCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCAAGTGCAGAGGCAAGTaGCTTTCCAGAACCGCGTGG +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAKCRGK*LSRTAW
Trigger: CCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTT...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp ATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTGCAACAGGGGCAACTTaGCGCTTCCCGACCCCCGGA +
Preference number: 4 (lower is better)
Translates to: MPDSSSPFPASTSLMGTSATGAT*RFPTPG
Trigger: TCCGGGGGTCGGGAAGCGGCAAGTTGCCCCTGTTGC...AGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000436944.5
CDS-3UTR GCA 90 bp GCATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTCTGTACGGGGCCACATGCCCTaGAGGAGGGGCCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: AFTHMHTPHSVTAGRASVRGHMP*RRGHLA
Trigger: AGCCAGGTGGCCCCTCCTGCAGGGCATGTGGCCCCG...TACAGAAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp GCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTGTCATAAAACAGCTCTaGGGGTCCGCCATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AHSLSSYLARPVGARLWAVIKQL*GSAMLR
Trigger: CCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGAC...AGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR CCA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTGACTTCCCTGCCCTaGCGCCTGTGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGLTSLP*RLCRSF
Trigger: GAAGGAGCGGCACAGGCGCCAGGGCAGGGAAGTCAG...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR CCA 90 bp ACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTGACAGCCTGCCAGGCGTaGCAAGGGGAAGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: TVRVVYHHATGEACLCGLTACQA*QGEGAC
Trigger: ACATGCCCCTTCCCCTTGCCACGCCTGGCAGGCTGT...CAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCTCCCCGCTGTGGGCATaGTCCCTCGTACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GTVRVVYHHATGEACLCGSPLWA*SLVHSL
Trigger: AAGGCTGTGTACGAGGGACCATGCCCACAGCGGGGA...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp TCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTTGGCTCTCCCCGCTGTaGGCATGGTCCCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: SWRTFGHFCVHVKPGRGAWLSPL*AWSLVH
Trigger: GTGTACGAGGGACCATGCCCACAGCGGGGAGAGCCA...AGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp TCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTCCTCTGCGGAGCCCATaGGGTTTTGCTCGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SWRTFGHFCVHVKPGRGAPLRSP*GFARPE
Trigger: CTCAGGGCGAGCAAAACCCCATGGGCTCCGCAGAGG...AGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp CTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTCAGCTCCAACTGCTCTaGGTTCTCAGGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LLQHPCPTLPHHSPPRHPQLQLL*VLRVQL
Trigger: CAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTG...AGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR TCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCGCCCAATGCTGCTGCTaGACTCCCCGAAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACAQCCC*TPRRGL
Trigger: CAGCCCTCTTCGGGGAGTTCAGCAGCAGCATTGGGC...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp GGTGTGCATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTGCCCGAGTCTGCTGCTaGGTGCGTGGCTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GVHLHTCTHHTASQLEGLARVCC*VRGSRL
Trigger: CAGCCTTGAGCCACGCACTCAGCAGCAGACTCGGGC...AAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TCGGAGTACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCGTACACAGCCTTTCTaGGCAGAAAAGGAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SEYNATQSDYRERCKGRIRTQPF*AEKEWY
Trigger: GTACCACTCCTTTTCTGCTCAGAAAGGCTGTGTACG...GATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp GCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTTTCCACTCAGCCCAGTaGCACAGCCAATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGRKGEPQHPRERVPDAGFHSAQ*HSQYPA
Trigger: TGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAA...ACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp GGAAGTGAGAGCCTACAGAACGAGGGATGGCAAGGTACGTGCTGGGCACCCTCATTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: GSESLQNEGWQGTCWAPSFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...TGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTCACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR GCA 90 bp ACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTGGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TVRVVYHHATGEACLCGLATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...CAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp ATATCAATCATCCGTGAGCTCAACGCTGAGGTACCGAGGCCCAGAGAGGTCGGCCTTAGAAGCGGGGCTTaGGCTTGCGGCCGGTGTACT +
Preference number: 4 (lower is better)
Translates to: ISIIRELNAEVPRPREVGLRSGA*ACGRCT
Trigger: AGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAG...GCCGACCTCTCTGGGCCTCGGTACCTCAGCGTTGAGCTCACGGATGATTGATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCGGATGGCAAGGTACGTaGTGGGCACCCTCAACACAC +
Preference number: 4 (lower is better)
Translates to: GTVRVVYHHATGEACLCGGWQGT*WAPSTH
Trigger: GTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCC...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR GCA 90 bp TTCACTCAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAAGGCAGGCTTGGGGCTaGCCTGGCGCCTGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: FTQPLWYKGRRPRKQAEVRQAWG*PGACAA
Trigger: AGCGGCACAGGCGCCAGGGCAGCCCCAAGCCTGCCT...TACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGTGGGCCCTTTTCCTTACTTCCTGGTCTCTTaGAGAAGCCCGGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: LTFAGGQRLLLLSVGPFPYFLVS*RSPVFW
Trigger: CCAGAATACCGGGCTTCTGCAAGAGACCAGGAAGTA...AGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp TTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCGTCATAAAACAGCTCTaGGGGTCCGCCATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: FFSSTHARLFLTIPRLDIVIKQL*GSAMLR
Trigger: CCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGAC...GATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000436944.5
CDS-3UTR CCA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGAGCAGTACAGGCGCTTaGCAGGGTTTTCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLSSTGA*QGFQTS
Trigger: AGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCT...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000442099.1
CDS-3UTR CCA 90 bp GCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ACAAPSSPAPMPDSSSPFPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...GAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR CCA 90 bp GAGTCTGCTGCTGAGTGCGTGGCTCAAGGCTGCTGCTTAGTTAGGGGCCCGAGGTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ESAAECVAQGCCLVRGPRFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...CCTCGGGCCCCTAACTAAGCAGCAGCCTTGAGCCACGCACTCAGCAGCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AGGGCAGAGAGAAAGTCCATGTCTAACAAATGTGGCAGCCCCCGCTGCAGCCGGGGGAAGGGGCATGTGTaGGCTCACAAAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RAERKSMSNKCGSPRCSRGKGHV*AHKGSP
Trigger: TGGACTCCCTTTGTGAGCCCACACATGCCCCTTCCC...CCGGCTGCAGCGGGGGCTGCCACATTTGTTAGACATGGACTTTCTCTCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCTGGCAAGGTACGTGCTaGGCACCCTCAACACACTGC +
Preference number: 4 (lower is better)
Translates to: GTVRVVYHHATGEACLCGWQGTC*APSTHC
Trigger: GCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCA...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp TTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTTGTTCGAGGCAGGCTTaGGGCTGCCCTGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: FGTVRVVYHHATGEACLCCSRQA*GCPGAC
Trigger: ACAGGCGCCAGGGCAGCCCCAAGCCTGCCTCGAACA...ACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTACCCAGGCATAGGGTaGCCGGAGCTACCAGACCTC +
Preference number: 4 (lower is better)
Translates to: HARLFLTIPRLDILNGNLYPGIG*PELPDL
Trigger: GAGGTCTGGTAGCTCCGGCCACCCTATGCCTGGGTA...GAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp ACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTGCAAATGTGCCTGGCTTaGATGGGATGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TVRVVYHHATGEACLCGLQMCLA*MGCPGP
Trigger: TGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTG...CAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000430270.5
CDS-3UTR TCA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCAGCTCCAACTGCTCTaGGTTCTCAGGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: GTVRVVYHHATGEACLCGQLQLL*VLRVQL
Trigger: CAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTG...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR TCA 90 bp ATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTTCCAGAACCGCGTGGTaGCTTAGAAGCGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: MPDSSSPFPASTSLMGTSSRTAW*LRSGAC
Trigger: GCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGA...AGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR TCA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGTCCAGAACCGCGTGGTaGCTTAGAAGCGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGSRTAW*LRSGAC
Trigger: GCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGA...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp TCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: SWRTFGHFCVHVKPGRGAFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...AGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACACAAGCGGGGCTTGCGCTTaGGGCCGGTGTACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LTIPRLDILNGNLSLVNTSGACA*GRCTGC
Trigger: ACACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCT...TGTGTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR GCA 90 bp TGCAGCCGGGGCAGGCTTCAGCAGTTGCTTTACCTCTCATTGGTGAACACAGACTCCAGGCTGCATGGCTaGACCCAGACATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: CSRGRLQQLLYLSLVNTDSRLHG*TQTSRT
Trigger: GGTCCTGGATGTCTGGGTGCAGCCATGCAGCCTGGA...GTCTGTGTTCACCAATGAGAGGTAAAGCAACTGCTGAAGCCTGCCCCGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp TGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTCTTAGCAGCCACCTGTaGCCCCAGGCATCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: CFGTVRVVYHHATGEACLLSSHL*PQASSS
Trigger: ACTGCTCGATGCCTGGGGGCACAGGTGGCTGCTAAG...AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp CTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACACACGTGCACCCCATGAGTaGCAAGGCCTCGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LTIPRLDILNGNLSLVNTRAPHE*QGLGAT
Trigger: TGTGGCCCCGAGGCCTTGGCACTCATGGGGTGCACG...TGTGTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp ACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTGGTCATAAAACAGCTCTaGGGGTCCGCCATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TVRVVYHHATGEACLCGLVIKQL*GSAMLR
Trigger: CCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGAC...CAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp TGCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGCCAGCCATCCTGGTCTaGATATCAATCATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: CRKEGRATAPKGEGPRCRPAILV*ISIIRE
Trigger: CTCACGGATGATTGATATCCAGACCAGGATGGCTGG...CCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp TGTGGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCCAGCCATCCTGGTCTaGATATCAATCATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: CGGHVGVQRHAVRLPRALPAILV*ISIIRE
Trigger: CTCACGGATGATTGATATCCAGACCAGGATGGCTGG...CAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGACATGACCTCCACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCC +
Preference number: 4 (lower is better)
Translates to: LLQHPCPTLPHHSPPRHPLAQPS*SGYQSS
Trigger: GGATGATTGATATCCAGACCAGGATGGCTGGGCGAG...AGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000436944.5
CDS-3UTR CCA 90 bp GGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTGGAAGCAGTACAGGCGCTTaGCAGGGTTTTCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: GRKGEPQHPRERVPDAGGSSTGA*QGFQTS
Trigger: AGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCT...TCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCGGAGTCCAGGCTGCATaGCTGCACCCAGACATCCAG +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACGVQAA*LHPDIQ
Trigger: CTGGATGTCTGGGTGCAGCCATGCAGCCTGGACTCC...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR TCA 90 bp TGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CRSFFSSTHARLFLTIPRGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...GCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR TCA 90 bp GGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTGGAGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRKGEPQHPRERVPDAGGGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...TCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR TCA 90 bp AAGGTACGTGCTGGGCACCCTCAACACACTGCCAAGATAGGTGGCACTACCCCTCTGAGGAACTGGAAGTaGGAGCCTACAGAACGAGGG +
Preference number: 4 (lower is better)
Translates to: KVRAGHPQHTAKIGGTTPLRNWK*EPTERG
Trigger: CCCTCGTTCTGTAGGCTCTCACTTCCAGTTCCTCAG...AGGGGTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR TCA 90 bp TTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCGGCAGGGGTGCTCCCTaGAGGATGTGGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: FLCFGTVRVVYHHATGEAGRGAP*RMWHTG
Trigger: ACCTGTGTGCCACATCCTTCAGGGAGCACCCCTGCC...GGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: CFGTVRVVYHHATGEACLFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp TGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFGTVRVVYHHATGEACLGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp TTCACTCAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAAGCGGGGCTTGCGCTTaGGGCCGGTGTACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: FTQPLWYKGRRPRKQAEVSGACA*GRCTGC
Trigger: ACACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCT...TACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR GCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCCCTCAGCAGCACACCTaGGACTGGCGCCTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATPQQHT*DWRLPA
Trigger: TGCCGGCAGGCGCCAGTCGCAGGTGTGCTGCTGAGG...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421744.5
ENST00000432522.5
CDS-3UTR CCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCGTCATAAAACAGCTCTaGGGGTCCGCCATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACVIKQL*GSAMLR
Trigger: CCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGAC...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp AGGGCAGAGAGAAAGTCCATGTCTAACAAATGTGGCAGCCCCCGCTGCAGCCGGCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCC +
Preference number: 4 (lower is better)
Translates to: RAERKSMSNKCGSPRCSRLAQPS*SGYQSS
Trigger: GGATGATTGATATCCAGACCAGGATGGCTGGGCGAG...CCGGCTGCAGCGGGGGCTGCCACATTTGTTAGACATGGACTTTCTCTCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp GGAAGTGAGAGCCTACAGAACGAGGGATGGCAAGGTACGTGCTGGGCACCCTCATTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSESLQNEGWQGTCWAPSFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...TGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCTCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCACACAGCGTCACAGCTaGAAGGGCTTCTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACTQRHS*KGFCRP
Trigger: GGGCCTACAGAAGCCCTTCCAGCTGTGACGCTGTGT...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp TGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCACGCAGAGCTTGGAGTaGGTGTGCATTTACACACAT +
Preference number: 4 (lower is better)
Translates to: CRSFFSSTHARLFLTIPRTQSLE*VCIYTH
Trigger: ATGTGTGTAAATGCACACCCACTCCAAGCTCTGCGT...GCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCCTTAATGGGAACCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAALNGNL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGTTCCCATTAAG...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442099.1
CDS-3UTR TCA 90 bp TCCTGGAGGACATTTGGCCATTTCTGTGTTCACGTGAAGCCGGGCAGGGGTGCTGGAACCTCTCATTGGTaGACACAGACTCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SWRTFGHFCVHVKPGRGAGTSHW*TQTPWV
Trigger: AACCCAGGGAGTCTGTGTTCACCAATGAGAGGTTCC...AGCACCCCTGCCCGGCTTCACGTGAACACAGAAATGGCCAAATGTCCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTCGGGATCCCCGGACCTaGTGCAACCATCAAATGTGC +
Preference number: 4 (lower is better)
Translates to: FGTVRVVYHHATGEACLCRDPRT*CNHQMC
Trigger: GCACATTTGATGGTTGCATCAGGTCCGGGGATCCCG...ACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428163.5
CDS-3UTR GCA 90 bp ATGCTCGCCCAGCCATCCTGGTCTGGATATCAATCATCCGTGAGCTCAACGCTGAAGTGCAGAGGCAAGTaGCTTTCCAGAACCGCGTGG +
Preference number: 4 (lower is better)
Translates to: MLAQPSWSGYQSSVSSTLKCRGK*LSRTAW
Trigger: CCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTT...CAGCGTTGAGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp GCCCTGGCGCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTAACAATATAGAAAAGTaGAGAGGCAAGTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ALAPVPLLLLQHPCPTLPNNIEK*RGKCLS
Trigger: GGAAAGGCACTTGCCTCTGCACTTTTCTATATTGTT...AGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR GCA 90 bp GTCTGGATATCAATCATCCGTGAGCTCAACGCTGAGGTACCGAGGCCCAGAGAGCAGGCTCCCCTCACTTaGGAACGTATTTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: VWISIIRELNAEVPRPREQAPLT*ERISGL
Trigger: AAGCCCGGAAATACGTTCGCAAGTGAGGGGAGCCTG...CTCTCTGGGCCTCGGTACCTCAGCGTTGAGCTCACGGATGATTGATATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp TGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTCAGGCTCCCCTCACTTaGGAACGTATTTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: CFGTVRVVYHHATGEACLQAPLT*ERISGL
Trigger: AAGCCCGGAAATACGTTCGCAAGTGAGGGGAGCCTG...AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000436944.5
CDS-3UTR GCA 90 bp TTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACGTGGCTCAAGGCTGCTaGTTAGTTAGGGGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: FLTIPRLDILNGNLSLVNVAQGC*LVRGPR
Trigger: CCTCGGGCCCCTAACTAAGCAGCAGCCTTGAGCCAC...GTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACTGCGTGGCTCAAGGCTaGTGCTTAGTTAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FLTIPRLDILNGNLSLVNCVAQG*CLVRGP
Trigger: CGGGCCCCTAACTAAGCAGCAGCCTTGAGCCACGCA...GTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACGAGTCTGCTGCTGAGTaGGTGGCTCAAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLTIPRLDILNGNLSLVNESAAE*VAQGCC
Trigger: GCAGCAGCCTTGAGCCACGCACTCAGCAGCAGACTC...GTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp GGGAGTCCAGGCTGCATGGCTGCACCCAGACATCCAGGACCCCAAACCCCTAGCACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GSPGCMAAPRHPGPQTPSTGLIL*QIKKLQ
Trigger: TTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGT...GCTAGGGGTTTGGGGTCCTGGATGTCTGGGTGCAGCCATGCAGCCTGGACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp TGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: CFGTVRVVYHHATGEACLPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp GCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCCTGACTTCCCTGCCCTaGCGCCTGTGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AEVEFLCFGTVRVVYHHALTSLP*RLCRSF
Trigger: GAAGGAGCGGCACAGGCGCCAGGGCAGGGAAGTCAG...GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR CCA 90 bp GCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTGGTGCCAGACTCTGGGCTGGTCTGGACAGTATTTaGACACAGACCCCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: AHSLSSYLARPVGARLWAGLDSI*TQTPCK
Trigger: CTTACAAGGGGTCTGTGTCCAAATACTGTCCAGACC...AGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp GGTGTGCATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTGTGGCCAGTACTTCCTaGTCTCTTGCAGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GVHLHTCTHHTASQLEGLVASTS*SLAEAR
Trigger: CCGGGCTTCTGCAAGAGACCAGGAAGTACTGGCCAC...AAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp TTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACATTTCTGTGTTCACGTaGAGCCGGGCAGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FLTIPRLDILNGNLSLVNISVFT*SRAGVL
Trigger: GAGCACCCCTGCCCGGCTTCACGTGAACACAGAAAT...GTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGCTCCTCCGCTGACCTaGGGATCCGGAAGACACAGG +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATAPPLT*GSGRHR
Trigger: CCTGTGTCTTCCGGATCCTCAGGTCAGCGGAGGAGC...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGTTCCACTCAGCCCAGTaGCACAGCCAATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGFHSAQ*HSQYPA
Trigger: TGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAA...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp TCGGAGTACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: SEYNATQSDYRERCKGRIEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...GATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp GAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: EPRGDLEAGLALAAGVLGEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...ACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp GAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGGGTAACAATATAGAAAAGTaGAGAGGCAAGTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EPRGDLEAGLALAAGVLGNNIEK*RGKCLS
Trigger: GGAAAGGCACTTGCCTCTGCACTTTTCTATATTGTT...ACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGAAGTTTCATTATGTTaGCCAGGCAGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAEVSLC*PGRSQT
Trigger: AGTTTGAGACCTGCCTGGGCAACATAATGAAACTTC...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430446.2
ENST00000442099.1
CDS-3UTR CCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCC +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACLAQPS*SGYQSS
Trigger: GGATGATTGATATCCAGACCAGGATGGCTGGGCGAG...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp ATGCAACCATCAAATGTGCCTGGCTTGAATGGGATGCCCTGGCCCATATCCCCCCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCC +
Preference number: 4 (lower is better)
Translates to: MQPSNVPGLNGMPWPISPLAQPS*SGYQSS
Trigger: GGATGATTGATATCCAGACCAGGATGGCTGGGCGAG...GGGGGATATGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CCA 90 bp TGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: CFGTVRVVYHHATGEACLFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp TTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCCGCCATCTTTGCCTCTaGGGTGAGTGTAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: FLCFGTVRVVYHHATGEARHLCL*GECRPH
Trigger: ATGGGGCCTACACTCACCCCAGAGGCAAAGATGGCG...GGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTGGGAGGGCTCCACTCTaGATGGGCACTGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCGRAPL*MGTAPH
Trigger: GTGAGGGGCAGTGCCCATCCAGAGTGGAGCCCTCCC...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCCTGCTGCATGTGACCTaGGAGGCTTGGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATLLHVT*EAWVRA
Trigger: TGCCCTCACCCAAGCCTCTCAGGTCACATGCAGCAG...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp GCCCAGCCATCCTGGTCTGGATATCAATCATCCGTGAGCTCAACGCTGAGGTACATAAAGAAGCTCCAATaGTCGCCCAGCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: AQPSWSGYQSSVSSTLRYIKKLQ*SPSHPG
Trigger: ACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTAT...GTACCTCAGCGTTGAGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp GCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AEVEFLCFGTVRVVYHHAATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR GCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTAGGCCCCATCCCTCCTaGCATGACCCCCTCACCATG +
Preference number: 4 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCRPHPS*HDPLTM
Trigger: CATGGTGAGGGGGTCATGGCAGGAGGGATGGGGCCT...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp TTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCC +
Preference number: 4 (lower is better)
Translates to: FGTVRVVYHHATGEACLCLAQPS*SGYQSS
Trigger: GGATGATTGATATCCAGACCAGGATGGCTGGGCGAG...ACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp ACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTGCACTGCCAAGATAGGTaGCACTACCCCTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: TVRVVYHHATGEACLCGLHCQDR*HYPYFL
Trigger: CAAAAAGTAGGGGTAGTGCCACCTATCTTGGCAGTG...CAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCAGAGGGTTGAAGAAGTaGCCAGTACTTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LCFGTVRVVYHHATGEACRGLKK*PVLPGL
Trigger: GAGACCAGGAAGTACTGGCCACTTCTTCAACCCTCT...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTTGCCAGACTCTGGGCTaGGCCCAGGGACACACCCAC +
Preference number: 4 (lower is better)
Translates to: KGRRPRKQAEVEFLCFGTCQTLG*AQGHTH
Trigger: GTGGGTGTGTCCCTGGGCCCAGCCCAGAGTCTGGCA...AGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTTGGTGCCAGACTCTaGGCTGGGCCCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRVGARL*AGPRDT
Trigger: TGTGTCCCTGGGCCCAGCCCAGAGTCTGGCACCAAC...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACACTGGGTGTCAGGTCTaGCTTCCCTGCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHTGCQV*LPCPGA
Trigger: GGCGCCAGGGCAGGGAAGTCAGACCTGACACCCAGT...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR TCA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCTACTTTTTGAATAGCTaGGGAATGGATGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GTVRVVYHHATGEACLCGYFLNS*GMDAQV
Trigger: GACCTGAGCATCCATTCCTCAGCTATTCAAAAAGTA...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR TCA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTTGTTCCCTACGTCCATaGCCCCTAGTGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFCSLRP*PLVLGL
Trigger: CAGACCCAGCACTAGGGGTCATGGACGTAGGGAACA...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp ATGCAACCATCAAATGTGCCTGGCTTGAATGGGATGCCCTGGCCCATATCCCCCGCATTACAGAGCCACTaGACAGCAGAAATGCTGATG +
Preference number: 4 (lower is better)
Translates to: MQPSNVPGLNGMPWPISPALQSH*TAEMLM
Trigger: CATCAGCATTTCTGCTGTGCAGTGGCTCTGTAATGC...GGGGGATATGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR GCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAATTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: EFLCFGTVRVVYHHATGEFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp GCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AEVEFLCFGTVRVVYHHAGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGTAGTCTACCACCATaGCACCGGAGAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATGSLPP*HRRSLP
Trigger: AGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACC...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTGGAGAAGCTCCTCCCTaGCCTGTACCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFGEAPP*PVPHLR
Trigger: CCTCAGATGAGGTACAGGGCAGGGAGGAGCTTCTCC...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGTCATAAAACAGCTCTaGGGGTCCGCCATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: EFLCFGTVRVVYHHATGEVIKQL*GSAMLR
Trigger: CCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGAC...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCTGACTTCCCTGCCCTaGCGCCTGTGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHLTSLP*RLCRSF
Trigger: GAAGGAGCGGCACAGGCGCCAGGGCAGGGAAGTCAG...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR CCA 90 bp ATGCTCAGGTCATTCAACTTACCCACATTTACTTTTAGGACATGTCGTTTGAAGCAGCACACCTGCGACTaGCGCCTGCCGGCACCCGGT +
Preference number: 4 (lower is better)
Translates to: MLRSFNLPTFTFRTCRLKQHTCD*RLPAPG
Trigger: ACCGGGTGCCGGCAGGCGCCAGTCGCAGGTGTGCTG...CTTCAAACGACATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp AAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTCTCCCCGAAGAGGGCTaGGCTCAGTGTGACCCCACT +
Preference number: 4 (lower is better)
Translates to: KGRRPRKQAEVEFLCFGTLPEEG*AQCDPT
Trigger: AGTGGGGTCACACTGAGCCCAGCCCTCTTCGGGGAG...AGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTCAAATGTGCCTGGCTTaGATGGGATGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCQMCLA*MGCPGP
Trigger: TGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTG...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000430270.5
CDS-3UTR TCA 90 bp GCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCCAGCTCCAACTGCTCTaGGTTCTCAGGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: AEVEFLCFGTVRVVYHHAQLQLL*VLRVQL
Trigger: CAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTG...GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR TCA 90 bp TTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FGTVRVVYHHATGEACLCGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...ACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR TCA 90 bp GGTGTGCATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GVHLHTCTHHTASQLEGLGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...AAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp AGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACATCGGTGCCTGGCACTaGTCCCACCAGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RKQAEVEFLCFGTVRVVYIGAWH*SHQPQA
Trigger: GGCCTGTGGCTGGTGGGATCAGTGCCAGGCACCGAT...GTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: GTVRVVYHHATGEACLCGEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGAAGAAGGAGACAGCCTaGCAGGCGTGGCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRKKETA*QAWQGE
Trigger: TTCCCCTTGCCACGCCTGGCAGGCTGTCTCCTTCTT...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGACCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTTGCGGCCGGTGTACTaGGTGTCAGGTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCLRPVY*VSGLTS
Trigger: GGAAGTCAGACCTGACACCCAGTACACCGGCCGCAA...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR CCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGACTACAGAACGAGGGATaGCAAGGTACGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGLQNEG*QGTCWA
Trigger: TGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAG...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR TCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGGAACCTCTCATTGGTaGACACAGACTCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGGTSHW*TQTPWV
Trigger: AACCCAGGGAGTCTGTGTTCACCAATGAGAGGTTCC...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR TCA 90 bp GAAAACACCAGGCTGAGGTCACATAAATGTCAGCGGCAAAGGTGGACTCAAGACGGGAAAACACCAGGCTaGGGTCACATAAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: ENTRLRSHKCQRQRWTQDGKTPG*GHINVS
Trigger: GCTGACATTTATGTGACCTCAGCCTGGTGTTTTCCC...GTCTTGAGTCCACCTTTGCCGCTGACATTTATGTGACCTCAGCCTGGTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR GCA 90 bp TTCACTCAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAATAAAGAAGCTCCAATaGTCGCCCAGCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: FTQPLWYKGRRPRKQAEVIKKLQ*SPSHPG
Trigger: ACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTAT...TACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp GCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCTTCCACTCAGCCCAGTaGCACAGCCAATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: AEVEFLCFGTVRVVYHHAFHSAQ*HSQYPA
Trigger: TGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAA...GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp AAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: KGRRPRKQAEVEFLCFGTFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...AGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: LWYKGRRPRKQAEVEFLCFSGYS*RTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAA...GCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGATGEA*LCGLGC
Trigger: ACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGC...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTAAAGGGAGTCCAGGCTaGATGGCTGCACCCAGACAT +
Preference number: 4 (lower is better)
Translates to: PLWYKGRRPRKQAEVEFLKGSPG*MAAPRH
Trigger: ATGTCTGGGTGCAGCCATGCAGCCTGGACTCCCTTT...AAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp CCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTACTCTGGATGGGCACTaGCCCTCACCTCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: PLWYKGRRPRKQAEVEFLTLDGH*PSPLLK
Trigger: CTTTAGCAGAGGTGAGGGGCAGTGCCCATCCAGAGT...AAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp CCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PLWYKGRRPRKQAEVEFLPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...AAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGCCTGCCTTTGTGGCCTaGGTTGTGATCAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRPAFVA*VVISSN
Trigger: GTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp CTTGGCAGGGTTTTCAGACTTCTTGTTAGCATTACAGAGCCACTGCACAGCAGATTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LGRVFRLLVSITEPLHSRFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...TCTGCTGTGCAGTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCCTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCTTCACTCAGCCCCTCTaGTATAAAGGTCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATFTQPL*YKGRRP
Trigger: GGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp TTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCCTCCTGGAGGACATTTaGCCATTTCTGTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: FLCFGTVRVVYHHATGEALLEDI*PFLCSR
Trigger: ACGTGAACACAGAAATGGCCAAATGTCCTCCAGGAG...GGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACACCCACCTAAGGCTTTaGCGAGGGAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHTHLRL*RGRAPL
Trigger: GAGTGGAGCCCTCCCTCGCCAAAGCCTTAGGTGGGT...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGGAACCTCTCATTGGTaGACACAGACTCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRGTSHW*TQTPWV
Trigger: AACCCAGGGAGTCTGTGTTCACCAATGAGAGGTTCC...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR TCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGGATCCTCTCATTGGTaGACACAGACTCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRGSSHW*TQTPWV
Trigger: AACCCAGGGAGTCTGTGTTCACCAATGAGAGGATCC...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR GCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAATAAAGAAGCTCCAATaGTCGCCCAGCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGIKKLQ*SPSHPG
Trigger: ACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTAT...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGACCAGCCATCCTGGTCTaGATATCAATCATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGPAILV*ISIIRE
Trigger: CTCACGGATGATTGATATCCAGACCAGGATGGCTGG...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp GCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCCCAGCCATCCTGGTCTaGATATCAATCATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: AEVEFLCFGTVRVVYHHAPAILV*ISIIRE
Trigger: CTCACGGATGATTGATATCCAGACCAGGATGGCTGG...GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACTTGAATGGGATGCCCTaGCCCATATCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHLNGMP*PISPSS
Trigger: GCTGCTGGGGGATATGGGCCAGGGCATCCCATTCAA...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000430270.5
CDS-3UTR CCA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTACCATCAAATGTGCCTaGCTTGAATGGGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFTIKCA*LEWDAL
Trigger: CAGGGCATCCCATTCAAGCCAGGCACATTTGATGGT...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000430270.5
CDS-3UTR CCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCACCATCAAATGTGCCTaGCTTGAATGGGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATTIKCA*LEWDAL
Trigger: CAGGGCATCCCATTCAAGCCAGGCACATTTGATGGT...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000430270.5
CDS-3UTR CCA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCACACACGCAGAGCTTaGAGTGGGTGTGCATTTACA +
Preference number: 4 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFHTRRA*SGCAFT
Trigger: TGTAAATGCACACCCACTCCAAGCTCTGCGTGTGTG...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
3UTR CAA 72 bp AAGCAGTACAGGCGCTTGGCAGGGTTTTCAGACTTCTaGTTAGCATTACAGAGCCACTGCACAGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: KQYRRLAGFSDF*LALQSHCTAEM
Trigger: CATTTCTGCTGTGCAGTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR TCA 90 bp GTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAAGTCCAAATGGGACCTaGTGTTTCTACCGTCACCTT +
Preference number: 4 (lower is better)
Translates to: VEFLCFGTVRVVYHHATGSPNGT*CFYRHL
Trigger: AAGGTGACGGTAGAAACATCAGGTCCCATTTGGACT...TCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR TCA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCGCCCTGTACCTCATCTaGGGAACTGGAAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGALYLI*GTGSES
Trigger: GCTCTCACTTCCAGTTCCTCAGATGAGGTACAGGGC...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR TCA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTTCTGCTAAAGAGGGTTaGAGAAGTGGCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFSAKEG*RSGQYF
Trigger: GAAGTACTGGCCACTTCTTCAACCCTCTTTAGCAGA...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp TTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLCFGTVRVVYHHATGEATGLIL*QIKKLQ
Trigger: TTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGT...GGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCTGTGCCTGGCTTGAATaGGATGCCCTGGCCCATATC +
Preference number: 4 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGCAWLE*DALAHI
Trigger: GATATGGGCCAGGGCATCCCATTCAAGCCAGGCACA...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000430270.5
CDS-3UTR CCA 90 bp TTCACTCAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTATGTCCAGAAAGTTTGTaGAGGTCATGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: FTQPLWYKGRRPRKQAEVCPESL*RSCRST
Trigger: TGTACTCCGACATGACCTCCACAAACTTTCTGGACA...TACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CCA 90 bp AAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTAGAAGCCCGGTATTCTaGGTGAACAGACACGTGCAC +
Preference number: 4 (lower is better)
Translates to: KGRRPRKQAEVEFLCFGTRSPVF*VNRHVH
Trigger: GTGCACGTGTCTGTTCACCCAGAATACCGGGCTTCT...AGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGTTTACCTCTCATTGGTaGACACAGACTCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRFTSHW*TQTPWV
Trigger: AACCCAGGGAGTCTGTGTTCACCAATGAGAGGTAAA...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR TCA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTTTAGGACATGTCGTTTaGAGACACCAGTGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFLGHVV*RHQCKD
Trigger: GTCCTTACACTGGTGTCTTCAAACGACATGTCCTAA...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR GCA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCTTCCACTCAGCCCAGTaGCACAGCCAATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGFHSAQ*HSQYPA
Trigger: TGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAA...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp AAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGCATTACAGAGCCACTaGACAGCAGAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KGRRPRKQAEVEFLCFGTALQSH*TAEMPA
Trigger: TGCTGGCATTTCTGCTGTGCAGTGGCTCTGTAATGC...AGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp GAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGAAAAGGAGAAATTGTaGAGCATGTCTGTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: EVEFLCFGTVRVVYHHATEKEKL*SMSVCR
Trigger: TCGGCACACAGACATGCTGCACAATTTCTCCTTTTC...GGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CCA 90 bp AAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTCAGGCACAGTCCAAATaGGACCTGATGTTTCTACCG +
Preference number: 4 (lower is better)
Translates to: KGRRPRKQAEVEFLCFGTQAQSK*DLMFLP
Trigger: CGGTAGAAACATCAGGTCCCATTTGGACTGTGCCTG...AGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR GCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACATAAAGAAGCTCCAATaGTCGCCCAGCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHIKKLQ*SPSHPG
Trigger: ACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTAT...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCATAAAGAAGCTCCAATaGTCGCCCAGCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGIKKLQ*SPSHPG
Trigger: ACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTAT...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp TTCACTCAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: FTQPLWYKGRRPRKQAEVEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...TACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CTGAGGAATGGATGCTCAGGTCATTCAACTTACCCACATTTACTTTTAGGACATGCACCCTCAACACACTaGCAAGATAGGTGGCACTAC +
Preference number: 4 (lower is better)
Translates to: LRNGCSGHSTYPHLLLGHAPSTH*QDRWHY
Trigger: GTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTGC...ATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCCAGCCATCCTGGTCTaGATATCAATCATCCGTGAG +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHPAILV*ISIIRE
Trigger: CTCACGGATGATTGATATCCAGACCAGGATGGCTGG...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR CCA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCGCCCTTTTCCTCTCCTaGAGGACATTTGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGALFLS*RTFGHF
Trigger: GAAATGGCCAAATGTCCTCCAGGAGAGGAAAAGGGC...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR TCA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACGGTTCAACTTCATCCTaGTTTTCACTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHGSTSS*FSLSPS
Trigger: AGAGGGGCTGAGTGAAAATCAGGATGAAGTTGAACC...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR TCA 90 bp CCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTACTACCCCTACTTTTTaGATAGCTGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: PLWYKGRRPRKQAEVEFLTTPTF*IAEEWM
Trigger: CATCCATTCCTCAGCTATTCAAAAAGTAGGGGTAGT...AAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS-3UTR CCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCTGLIL*QIKKLQ
Trigger: TTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGT...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp AGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTGAGGTAGAATTTCTTTaGTTTGGCACTGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: RSKAQKTSRGRISLLWHCEVEFL*FGTVRV
Trigger: TACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTC...ACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000430446.2
ENST00000432522.5
ENST00000436944.5
CDS-3UTR GCA 90 bp CGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGAACAATATAGAAAAGTaGAGAGGCAAGTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RRPRKQAEVEFLCFGTVRNNIEK*RGKCLS
Trigger: GGAAAGGCACTTGCCTCTGCACTTTTCTATATTGTT...CCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR GCA 90 bp CTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCGAAGTTTCATTATGTTaGCCAGGCAGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LWYKGRRPRKQAEVEFLCEVSLC*PGRSQT
Trigger: AGTTTGAGACCTGCCTGGGCAACATAATGAAACTTC...GCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430446.2
CDS-3UTR CCA 90 bp AGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACACAGGGCTTATTCTCTaGCAGATAAAGAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RKQAEVEFLCFGTVRVVYTGLIL*QIKKLQ
Trigger: TTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGT...GTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000430270.5
ENST00000432522.5
ENST00000436944.5
CDS CCA 90 bp GCGCGGAGGCCGCCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTaGTGCTGGGCAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCC +
Preference number: 5 (lower is better)
Translates to: ARRPPSASRASPRPT*CWAVPPSVASMIAA
Trigger: GGCCGCGATCATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTGAAGCGCTCGGCGGCCTCCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 90 bp CGGAGGCCGCCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTGGTaGTGGGCAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCCTAC +
Preference number: 5 (lower is better)
Translates to: RRPPSASRASPRPTW*WAVPPSVASMIAAY
Trigger: GTAGGCCGCGATCATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTGAAGCGCTCGGCGGCCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS TCA 90 bp CCAGGCCTACGTGGTGCTGGGCAGTGCCACCCTCCGTCGCAAGTATaGTCGCGGCCTACTCAGCGACGAGGACCTGCGCGGACCTGGCGT +
Preference number: 5 (lower is better)
Translates to: PGLRGAGQCHPPSQV*SRPTQRRGPARTWR
Trigger: ACGCCAGGTCCGCGCAGGTCCTCGTCGCTGAGTAGGCCGCGATCATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS-3UTR CAA 90 bp ACAGGTGCGGCCACGGAGTCTAGGATGGGCGGGCACCTGAGTCTCTGGGTCGGTGGAGCCCATGGGGTTTaGCTCGCCCTGAGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: TGAATESRMGGHLSLWVGGAHGV*LALRGC
Trigger: GCACCCCCTCAGGGCGAGCAAAACCCCATGGGCTCC...ACCGACCCAGAGACTCAGGTGCCCGCCCATCCTAGACTCCGTGGCCGCACCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS CCA 90 bp AGGCCGCCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTGGTGCTaGGCAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCCTACTCA +
Preference number: 5 (lower is better)
Translates to: RPPSASRASPRPTWC*AVPPSVASMIAAYS
Trigger: TGAGTAGGCCGCGATCATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTGAAGCGCTCGGCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS-3UTR CAA 90 bp CGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGTGTTCGAGGCAGGCTaGGGGCTGCCCTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: RSFFSSTHARLFLTIPRLVFEAG*GLPWRL
Trigger: CAGGCGCCAGGGCAGCCCCAAGCCTGCCTCGAACAC...GAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS GCA 90 bp GCACCCAGCCTGGGCCTAGGAGCGAGGACTTATTCCCAGGGCGACTaGTCGTATTCGCGCACGGCGCTGTATGATCTGCTCGGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: APSLGLGARTYSQGD*SYSRTALYDLLGVP
Trigger: GGGGACGCCGAGCAGATCATACAGCGCCGTGCGCGAATACGAGCAGTCGCCCTGGGAATAAGTCCTCGCTCCTAGGCCCAGGCTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS-3UTR CAA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCAAGCGGGGCTTGCGCTaGCGGCCGGTGTACTGGGTG +
Preference number: 5 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAKRGLR*RPVYWV
Trigger: CACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTT...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS-3UTR CAA 90 bp TGTGGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGACTACCGCGAGCGCTGAGCAACAGGGGCAACTaGCCGCTTCCCGACCCCCGG +
Preference number: 5 (lower is better)
Translates to: CGGHVGVQRHAVRLPRALSNRGN*PLPDPR
Trigger: CCGGGGGTCGGGAAGCGGCAAGTTGCCCCTGTTGCT...CAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGACATGACCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CAA 90 bp CTCACTTTCGCCGGCGGCCAGCGGCTCCTCCTCTTATCCGTGGGCCCTTTTCCTTGTGACCCCACTCGCTaGCAGCCGGCAGGACCACGA +
Preference number: 5 (lower is better)
Translates to: LTFAGGQRLLLLSVGPFPCDPTR*QPAGPR
Trigger: TCGTGGTCCTGCCGGCTGCAAGCGAGTGGGGTCACA...AGGAAAAGGGCCCACGGATAAGAGGAGGAGCCGCTGGCCGCCGGCGAAAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS GCA 90 bp TCCACAGCCACGCAGGCCCAAATCAAGGCGGCTTACTACCGTCAGTaGTTTCTCTACCACCCGGACCGCAACTCCGGGAGCGCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: STATQAQIKAAYYRQ*FLYHPDRNSGSAEA
Trigger: GGCCTCCGCGCTCCCGGAGTTGCGGTCCGGGTGGTAGAGAAAGCACTGACGGTAGTAAGCCGCCTTGATTTGGGCCTGCGTGGCTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 90 bp ATTCCCAGGGCGACTGCTCGTATTCGCGCACGGCGCTGTATGATCTaGTCGGCGTCCCCTCCACAGCCACGCAGGCCCAAATCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: IPRATARIRARRCMI*SASPPQPRRPKSRR
Trigger: CCGCCTTGATTTGGGCCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCATACAGCGCCGTGCGCGAATACGAGCAGTCGCCCTGGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 90 bp GAGTCCCCCAACTCCCCGGCACACCCAGTAGCCGAGGGACTCACCTaGTCTGAGTTCTCAGGGTACAGCTGCAGGACAGCTCGGGATCCC +
Preference number: 5 (lower is better)
Translates to: ESPNSPAHPVAEGLT*SEFSGYSCRTARDP
Trigger: GGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGGTGAGTCCCTCGGCTACTGGGTGTGCCGGGGAGTTGGGGGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463307.5
ENST00000478670.5
CDS-3UTR CAA 90 bp GCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCAAGCGGGGCTTGCGCTaGCGGCCGGTGTACTGGGTG +
Preference number: 5 (lower is better)
Translates to: ACAAPSSPAPMPDSSSPFKRGLR*RPVYWV
Trigger: CACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTT...GAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR CAA 90 bp TACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGAAGAGTGAGTCAGGCTaGTCTGGGGGTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: YNATQSDYRERCKGRIQRKSESG*SGGGWG
Trigger: CCCCCACCCACCCCCAGACAAGCCTGACTCACTCTT...CCTCTGGATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS GCA 90 bp CCAGTAGCCGAGGGACTCACCTGCTCTGAGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCCCGGACCCAGCATGGCAGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: PVAEGLTCSEFSGYS*RTARDPRTQHGRAD
Trigger: ATCAGCCCTGCCATGCTGGGTCCGGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGGTGAGTCCCTCGGCTACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478670.5
CDS-3UTR CAA 90 bp TGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCACTTGGCAAGGCCCGTaGGTGCCAGACTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: CRSFFSSTHARLFLTIPRTWQGP*VPDSGL
Trigger: CAGCCCAGAGTCTGGCACCAACGGGCCTTGCCAAGT...GCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS TCA 90 bp GCTGATGGACAGCTGATGGATGGGGCTGCCCGACTGGCCCCCATGTaGATCCATGGCAAGCTTACCTCCGAGTCTGGTGGCCTCGGATGC +
Preference number: 5 (lower is better)
Translates to: ADGQLMDGAARLAPM*IHGKLTSESGGLGC
Trigger: GCATCCGAGGCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATGGGGGCCAGTCGGGCAGCCCCATCCATCAGCTGTCCATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 90 bp GACTTATTCCCAGGGCGACTGCTCGTATTCGCGCACGGCGCTGTATaGTCTGCTCGGCGTCCCCTCCACAGCCACGCAGGCCCAAATCAA +
Preference number: 5 (lower is better)
Translates to: DLFPGRLLVFAHGAV*SARRPLHSHAGPNQ
Trigger: TTGATTTGGGCCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCATACAGCGCCGTGCGCGAATACGAGCAGTCGCCCTGGGAATAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 90 bp CTCCTGCAGCCCAGGCAGCACACCGGCCCCCAGCGCTCACTTCTTTaGTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAA +
Preference number: 5 (lower is better)
Translates to: LLQPRQHTGPQRSLL*FGTVRVVYHHATGE
Trigger: TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGTGAGCGCTGGGGGCCGGTGTGCTGCCTGGGCTGCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487006.2
CDS CCA 90 bp GGATCCAATCCAGGCTGGGCCCAGCACTCGAAGAGGAAGCAGCAGTaGAGTGAGGAGCAGCCAGGAAGGCTGAGGAAACCACGATGGTGG +
Preference number: 5 (lower is better)
Translates to: GSNPGWAQHSKRKQQ*SEEQPGRLRKPRWW
Trigger: CCACCATCGTGGTTTCCTCAGCCTTCCTGGCTGCTCCTCACTCCACTGCTGCTTCCTCTTCGAGTGCTGGGCCCAGCCTGGATTGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGAAGCGGGGCTTGCGCTaGCGGCCGGTGTACTGGGTG +
Preference number: 5 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGKRGLR*RPVYWV
Trigger: CACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTT...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000442099.1
CDS TCA 90 bp CTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCCTGGGTTGTaGTCAGCTCCAACTGAGGAAAGAAAGGCAGCGGGTCAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: LPPCHRRSLPLWPGL*SAPTEERKAAGQAA
Trigger: CGCTGCCTGACCCGCTGCCTTTCTTTCCTCAGTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS GCA 90 bp TGGGTTGTGATCAGCTCCAACTGCTCTGAGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCCCGGACCCAGCATGGCAGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: WVVISSNCSEFSGYS*RTARDPRTQHGRAD
Trigger: ATCAGCCCTGCCATGCTGGGTCCGGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTGATCACAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421744.5
ENST00000430446.2
ENST00000436944.5
CDS CCA 90 bp CAGTGGAGTGAGGAGCAGCCAGGAAGGCTGAGGAAACCACGATGGTaGGTGGAAGGCCAAGTGAAGGAAGCGTCAAGGAGGGAGCGCACT +
Preference number: 5 (lower is better)
Translates to: QWSEEQPGRLRKPRW*VEGQVKEASRRERT
Trigger: AGTGCGCTCCCTCCTTGACGCTTCCTTCACTTGGCCTTCCACCCACCATCGTGGTTTCCTCAGCCTTCCTGGCTGCTCCTCACTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp CCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGTGTACTGAAGCAGTACAGGCGCTaGGCAGGGTTTTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: PEPRGDLEAGLALAAGVLKQYRR*AGFSDF
Trigger: GAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTT...CAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000442099.1
CDS-3UTR CAA 90 bp GGGCTTGCGCTTGCGGCCGGTGTACTGGGTGTCAGGTCTGACTTCCCTGCCCTGAATGGGAACCTCTCATaGGTGAACACAGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: GLALAAGVLGVRSDFPALNGNLS*VNTDSL
Trigger: CAGGGAGTCTGTGTTCACCAATGAGAGGTTCCCATT...CAGGGCAGGGAAGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR CAA 90 bp TCGGAGTACAACGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCACACACACGCAGAGCTaGGAGTGGGTGTGCATTTAC +
Preference number: 5 (lower is better)
Translates to: SEYNATQSDYRERCKGRITHTQS*EWVCIY
Trigger: GTAAATGCACACCCACTCCAAGCTCTGCGTGTGTGT...GATGCGGCCTTTGCAGCGCTCGCGGTAGTCGGACTGCGTGGCGTTGTACTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS TCA 90 bp CTCCAATGCTCGCCCAGCCATCCTGGTCTGGATATCAATCATCCGTaGGCCGGGTCCTTCCCTTCCCGCACCCCCAAATTCTACGGCCTT +
Preference number: 5 (lower is better)
Translates to: LQCSPSHPGLDINHP*AGSFPSRTPKFYGL
Trigger: AAGGCCGTAGAATTTGGGGGTGCGGGAAGGGAAGGACCCGGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421304.5
CDS TCA 90 bp TCGACATCCTTAATGGGAACCTGTGGCGGAGACACAGCTATGAGCTaGTGGACAGCTGATGGATGGGGCTGCCCGACTGGCCCCCATGTG +
Preference number: 5 (lower is better)
Translates to: STSLMGTCGGDTAMS*WTADGWGCPTGPHV
Trigger: CACATGGGGGCCAGTCGGGCAGCCCCATCCATCAGCTGTCCATCAGCTCATAGCTGTGTCTCCGCCACAGGTTCCCATTAAGGATGTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 90 bp GGAAAGTCATCAATGGAGCTAAAGGAAGGAGGTGAAGACGGGGAGTaGCCCAAAGCACAGGTCCCAAGAGAAGTGGGGGCCCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GKSSMELKEGGEDGE*PKAQVPREVGAQPC
Trigger: GCAGGGCTGGGCCCCCACTTCTCTTGGGACCTGTGCTTTGGGGCACTCCCCGTCTTCACCTCCTTCCTTTAGCTCCATTGATGACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp CTGAGGGTGGCGTCATGTGCCCATTCACTCAGCAGCTACTTGGCAAGGCCCGTTTCAGGCTCCCCTCACTaGCGAACGTATTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: LRVASCAHSLSSYLARPVSGSPH*RTYFRA
Trigger: AGCCCGGAAATACGTTCGCAAGTGAGGGGAGCCTGA...AACGGGCCTTGCCAAGTAGCTGCTGAGTGAATGGGCACATGACGCCACCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CAA 90 bp TTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACAGCAACAGGGGCAACTaGCCGCTTCCCGACCCCCGG +
Preference number: 5 (lower is better)
Translates to: FLTIPRLDILNGNLSLVNSNRGN*PLPDPR
Trigger: CCGGGGGTCGGGAAGCGGCAAGTTGCCCCTGTTGCT...GTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000436944.5
CDS-3UTR CAA 90 bp GGCAAGGGGAAGGGGCATGTGTGGGCTCACAAAGGGAGTCCAGGCTGCATGGCTGGCAGGCTTCAGCAGTaGCTTTACCTCTCATTGGTG +
Preference number: 5 (lower is better)
Translates to: GKGKGHVWAHKGSPGCMAGRLQQ*LYLSLV
Trigger: CACCAATGAGAGGTAAAGCAACTGCTGAAGCCTGCC...AGCCATGCAGCCTGGACTCCCTTTGTGAGCCCACACATGCCCCTTCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS TCA 90 bp CTCCAATGCTCGCCCAGCCATCCTGGTCTGGATATCAATCATCCGTaGGCCCCAAATTCTACGGCCTTTCCGGGCAACGCCAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: LQCSPSHPGLDINHP*APNSTAFPGNASNR
Trigger: CCTGTTGCTGGCGTTGCCCGGAAAGGCCGTAGAATTTGGGGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436944.5
ENST00000441822.5
CDS-3UTR CAA 90 bp GCAGGAAGGAAGGGAGAGCCACAGCACCCAAGGGAGAGGGTCCCAGATGCAGGTTCAATCATCCGTGAGTaGCGAACGTATTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: AGRKGEPQHPRERVPDAGSIIRE*RTYFRA
Trigger: AGCCCGGAAATACGTTCGCAACTCACGGATGATTGA...ACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS-3UTR CAA 90 bp TATCAATCATCCGTGAGCTCAACGCTGAGGTACCGAGGCCCAGAGAGGTCGGCATCAGGCTCCCCTCACTaGCGAACGTATTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: YQSSVSSTLRYRGPERSASGSPH*RTYFRA
Trigger: AGCCCGGAAATACGTTCGCAAGTGAGGGGAGCCTGA...TGCCGACCTCTCTGGGCCTCGGTACCTCAGCGTTGAGCTCACGGATGATTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CAA 90 bp CAGAGAGAAAGTCCATGTCTAACAAATGTGGCAGCCCCCGCTGCAGCCGGGGCAGTTTCTACCGTCACCTaGGTGTCCCTGCTGCATGTG +
Preference number: 5 (lower is better)
Translates to: QRESPCLTNVAAPAAAGAVSTVT*VSLLHV
Trigger: CACATGCAGCAGGGACACCAAGGTGACGGTAGAAAC...TGCCCCGGCTGCAGCGGGGGCTGCCACATTTGTTAGACATGGACTTTCTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS TCA 90 bp GAGCAAAGACCCAAGGGGTCAGGCAGCATAAACCTATGGTGGACGTaGGGAACATGCATGGCTGTGCCCAGCTGTGGGCCTTCCAAACAC +
Preference number: 5 (lower is better)
Translates to: EQRPKGSGSINLWWT*GTCMAVPSCGPSKH
Trigger: GTGTTTGGAAGGCCCACAGCTGGGCACAGCCATGCATGTTCCTCACGTCCACCATAGGTTTATGCTGCCTGACCCCTTGGGTCTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 90 bp CCATGTCATCTGCCAAGAGAAGGCATCCCACCCCACCTCCGCAGATaGCACCCCCTTAGGATATCAGGTCATCAAATGTGCCATCAGGGG +
Preference number: 5 (lower is better)
Translates to: PCHLPREGIPPHLRR*HPLRISGHQMCHQG
Trigger: CCCCTGATGGCACATTTGATGACCTGATATCCTAAGGGGGTGGCATCTGCGGAGGTGGGGTGGGATGCCTTCTCTTGGCAGATGACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463307.5
ENST00000478670.5
CDS GCA 90 bp AGCTTACCTCCGAGTCTGGTGGCCTCGGATGCCCCTTCTCTCAAATaGTCCACCTTCCCTATAACACAATTCCCCGCTCTGGACACCCTC +
Preference number: 5 (lower is better)
Translates to: SLPPSLVASDAPSLK*STFPITQFPALDTL
Trigger: GAGGGTGTCCAGAGCGGGGAATTGTGTTATAGGGAAGGTGGAGCATTTGAGAGAAGGGGCATCCGAGGCCACCAGACTCGGAGGTAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCAAGCAGTACAGGCGCTaGGCAGGGTTTTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: GTVRVVYHHATGEACLCGKQYRR*AGFSDF
Trigger: GAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTT...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000432522.5
CDS-3UTR CAA 90 bp GCCTGTGCCGCTCCTTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCAATGGGAACCTCTCATaGGTGAACACAGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: ACAAPSSPAPMPDSSSPFNGNLS*VNTDSL
Trigger: CAGGGAGTCTGTGTTCACCAATGAGAGGTTCCCATT...GAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430270.5
ENST00000430446.2
ENST00000436944.5
CDS-3UTR CAA 90 bp AGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGCTTGCGCTTGCGGCCGGAAGTTTCATTATGTaGCCCAGGCAGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SAFPEPRGDLEAGLALAAGSFIM*PRQVSN
Trigger: GTTTGAGACCTGCCTGGGCAACATAATGAAACTTCC...GGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430446.2
ENST00000442099.1
CDS-3UTR CAA 90 bp GCATTTACACACATGCACACACCACACAGCGTCACAGCTGGAAGGGCTTCTGTACCTGATGCCTCCCAGTaGGACTCACTTTCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: AFTHMHTPHSVTAGRASVPDASQ*DSLSPA
Trigger: CGCCGGCGAAAGTGAGTCCAACTGGGAGGCATCAGG...TACAGAAGCCCTTCCAGCTGTGACGCTGTGTGGTGTGTGCATGTGTGTAAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CAA 90 bp GCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAGTACTTCCTGGTCTCTaGCAGAAGCCCGGTATTCTG +
Preference number: 5 (lower is better)
Translates to: APMPDSSSPFPASTSLMGVLPGL*QKPGIL
Trigger: CAGAATACCGGGCTTCTGCAAGAGACCAGGAAGTAC...TCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS CCA 90 bp CAAAGTGAGGGCAGAGTGGCGAACCAGGGGGCAAGAGGTGAGCCATaGGAGAAGCAGCAAGGGGGAAAGTCATCAATGGAGCTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: QSEGRVANQGARGEP*EKQQGGKSSMELKE
Trigger: TTCCTTTAGCTCCATTGATGACTTTCCCCCTTGCTGCTTCTCCCATGGCTCACCTCTTGCCCCCTGGTTCGCCACTCTGCCCTCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp GGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCCTTTGTGGCAGAAGGATCCTCTCATaGGTGAACACAGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: GTVRVVYHHATGEACLCGRRILS*VNTDSL
Trigger: CAGGGAGTCTGTGTTCACCAATGAGAGGATCCTTCT...GCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421744.5
CDS GCA 90 bp CCTCCCTCCCCTCCTTCAGAAGCCAGTCTGCTCCAGGACAAATCCTaGCTGGGAGAACTTAAGGTCGCTGTAAGCCACGTAGAGAAAAGT +
Preference number: 5 (lower is better)
Translates to: PPSPPSEASLLQDKS*LGELKVAVSHVEKS
Trigger: ACTTTTCTCTACGTGGCTTACAGCGACCTTAAGTTCTCCCAGGCAGGATTTGTCCTGGAGCAGACTGGCTTCTGAAGGAGGGGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS-3UTR CAA 90 bp GCTCTGAGTTCTCAGGGTACAGCTGCAGGACAGCTCGGGATCCCCGGACGAGAAGGGTTTTCAGACTTCTaGTTAGCATTACAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: ALSSQGTAAGQLGIPGREGFSDF*LALQSH
Trigger: GTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCC...TTCTCGTCCGGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CAA 90 bp CTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTGCAAGCAGTACAGGCGCTaGGCAGGGTTTTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: LCFGTVRVVYHHATGEACKQYRR*AGFSDF
Trigger: GAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTT...GCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000432522.5
CDS-3UTR CAA 90 bp TTCTTCTCCAGCACCCATGCCCGACTCTTCCTCACCATTCCCCGCCTCGACATCGGAAGTTTCATTATGTaGCCCAGGCAGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FFSSTHARLFLTIPRLDIGSFIM*PRQVSN
Trigger: GTTTGAGACCTGCCTGGGCAACATAATGAAACTTCC...GATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430446.2
CDS GCA 90 bp TTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAAGCCTaGCTTTGTGGCCTGGGTTGTGATCAGCTCCAACTGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: FGTVRVVYHHATGEA*LCGLGCDQLQLRKE
Trigger: TTCTTTCCTCAGTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS CCA 90 bp GGAGTCATCTCAAGATTCTACAAAGAGTACAAAGTGAGGGCAGAGTaGCGAACCAGGGGGCAAGAGGTGAGCCATGGGAGAAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GVISRFYKEYKVRAE*RTRGQEVSHGRSSK
Trigger: CTTGCTGCTTCTCCCATGGCTCACCTCTTGCCCCCTGGTTCGCCACTCTGCCCTCACTTTGTACTCTTTGTAGAATCTTGAGATGACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp AAAAGTGCAGAGGCAAGTGCCTTTCCAGAACCGCGTGGTGACTTAGAAGCGGGGAATGGGAACCTCTCATaGGTGAACACAGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: KSAEASAFPEPRGDLEAGNGNLS*VNTDSL
Trigger: CAGGGAGTCTGTGTTCACCAATGAGAGGTTCCCATT...CCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAGGCACTTGCCTCTGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000430446.2
CDS-3UTR CAA 90 bp CCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTCACCCACCTAAGGCTTaGGCGAGGGAGGGCTCCACT +
Preference number: 5 (lower is better)
Translates to: PLWYKGRRPRKQAEVEFLHPPKA*AREGST
Trigger: AGTGGAGCCCTCCCTCGCCAAAGCCTTAGGTGGGTG...AAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS TCA 90 bp CTAGAAAAGGAGAAATTGTGCAGCATGTCTGTGTGCCGACAGCAGTaGCCCAGGAGAGTCAAGATGAGGATGCAGGAAGGAAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LEKEKLCSMSVCRQQ*PRRVKMRMQEGRES
Trigger: GCTCTCCCTTCCTTCCTGCATCCTCATCTTGACTCTCCTGGGTCACTGCTGTCGGCACACAGACATGCTGCACAATTTCTCCTTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 90 bp GGAGAATTACAGAACAAAGCAACTCCCCTCATTCTCACTTTCCAGTaGAGGGACCCAGCTCCCCACTCAAGTTTAGGGAGATGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GELQNKATPLILTFQ*RDPAPHSSLGRWPP
Trigger: TGGTGGCCATCTCCCTAAACTTGAGTGGGGAGCTGGGTCCCTGCACTGGAAAGTGAGAATGAGGGGAGTTGCTTTGTTCTGTAATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS-3UTR CAA 90 bp TTCCTCACCATTCCCCGCCTCGACATCCTTAATGGGAACCTCTCATTGGTGAACCGCTGTCCAGAAAGTTaGTGGAGGTCATGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: FLTIPRLDILNGNLSLVNRCPES*WRSCRS
Trigger: ACTCCGACATGACCTCCACAAACTTTCTGGACAGCG...GTTCACCAATGAGAGGTTCCCATTAAGGATGTCGAGGCGGGGAATGGTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS-3UTR CAA 90 bp CCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTGGGGTGCGCCGGATCTaGCTTTCCTTTCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PLWYKGRRPRKQAEVEFLGVRRI*LSFLRV
Trigger: CACCCTCAGAAAGGAAAGCAAGATCCGGCGCACCCC...AAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436944.5
CDS CCA 90 bp GAAACTCCAGGTATAGACACTGAGGGGGCATTGGGAAACCCCAGGTaGCAAGAGACTGAAGATACACATTTGGGAATTAGGACCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ETPGIDTEGALGNPR*QETEDTHLGIRTFR
Trigger: CCGGAAGGTCCTAATTCCCAAATGTGTATCTTCAGTCTCTTGCCACCTGGGGTTTCCCAATGCCCCCTCAGTGTCTATACCTGGAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 90 bp TTCGGGAAGCAGCTAAGCAGCAGTAAGCAGGCCGCTTTCTACCAATaGAATGACACATCATCACCTAGACTTCAAGAGCACAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: FGKQLSSSKQAAFYQ*NDTSSPRLQEHSRQ
Trigger: CTGTCGACTGTGCTCTTGAAGTCTAGGTGATGATGTGTCATTGCATTGGTAGAAAGCGGCCTGCTTACTGCTGCTTAGCTGCTTCCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CCA 90 bp CAGGGACCCAGCTCCCCACTCAAGTTTAGGGAGATGGCCACCAATTaGAATCCAGAGTCATTCATGTTATTAGTCAGGAACAGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QGPSSPLKFREMATN*NPESFMLLVRNSSS
Trigger: TGAAGAGCTGTTCCTGACTAATAACATGAATGACTCTGGATTCCAATTGGTGGCCATCTCCCTAAACTTGAGTGGGGAGCTGGGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS-3UTR CAA 90 bp GAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACCATGCCACCGGAGAATTGCTTTACCTCTCATaGGTGAACACAGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: EFLCFGTVRVVYHHATGELLYLS*VNTDSL
Trigger: CAGGGAGTCTGTGTTCACCAATGAGAGGTAAAGCAA...TTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432522.5
CDS GCA 90 bp GAGGAACATGCATGGCTGTGCCCAGCTGTGGGCCTTCCAAACACATaGATTTTGGGCTCATTTTTCCTCTTAAATGTCTTAAAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: EEHAWLCPAVGLPNT*ILGSFFLLNVLKVL
Trigger: TAAGACCTTTAAGACATTTAAGAGGAAAAATGAGCCCAAAATGCATGTGTTTGGAAGGCCCACAGCTGGGCACAGCCATGCATGTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS-3UTR CAA 90 bp TATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCTCAATCATCCGTGAGTaGCGAACGTATTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: YKGRRPRKQAEVEFLCFGSIIRE*RTYFRA
Trigger: AGCCCGGAAATACGTTCGCAACTCACGGATGATTGA...GCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000432522.5
CDS-3UTR CAA 90 bp AGAAAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACTCAATCATCCGTGAGTaGCGAACGTATTTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RKQAEVEFLCFGTVRVVYSIIRE*RTYFRA
Trigger: AGCCCGGAAATACGTTCGCAACTCACGGATGATTGA...GTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421744.5
ENST00000428163.5
ENST00000432522.5
CDS-3UTR CAA 90 bp CAGCCCCTCTGGTATAAAGGTCGAAGGCCCAGAAAACAAGCAGAGGTAGAATTTGTCGGCAACTTAAAGTaGATTTACCAGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: QPLWYKGRRPRKQAEVEFVGNLK*IYQRQK
Trigger: TTTCTGTCTCTGGTAAATCAACTTTAAGTTGCCGAC...AAATTCTACCTCTGCTTGTTTTCTGGGCCTTCGACCTTTATACCAGAGGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS-3UTR CAA 90 bp AAACAAGCAGAGGTAGAATTTCTTTGCTTTGGCACTGTTAGGGTAGTCTACCACGGGTTTTCAGACTTCTaGTTAGCATTACAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: KQAEVEFLCFGTVRVVYHGFSDF*LALQSH
Trigger: GTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCC...GTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430270.5
ENST00000432522.5
CDS GCA 72 bp GCAAGTATGATCGCGGCCTACTCAGCGACGAGGACCTaGGCGGACCTGGCGTCCGGCCCTCCAGGACGCCCG +
Preference number: 6 (lower is better)
Translates to: ASMIAAYSATRT*ADLASGPPGRP
Trigger: CGGGCGTCCTGGAGGGCCGGACGCCAGGTCCGCGCAGGTCCTCGTCGCTGAGTAGGCCGCGATCATACTTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS TCA 72 bp CCAGGGCGACTGCTCGTATTCGCGCACGGCGCTGTATaGTCTGCTCGGCGTCCCCTCCACAGCCACGCAGGC +
Preference number: 6 (lower is better)
Translates to: PGRLLVFAHGAV*SARRPLHSHAG
Trigger: GCCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCATACAGCGCCGTGCGCGAATACGAGCAGTCGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS CCA 72 bp CCGCCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTaGTGCTGGGCAGTGCCACCCTCCGTCGCAAGTATG +
Preference number: 6 (lower is better)
Translates to: PPSASRASPRPT*CWAVPPSVASM
Trigger: CATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTGAAGCGCTCGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS TCA 72 bp TGGGCGGGCGCCTGCAATCCCAGCTACTCGGGAGGCTaGCGCAAGAGAATCGCTGGAACCTGGGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: WAGACNPSYSGG*RKRIAGTWEAE
Trigger: CTCTGCCTCCCAGGTTCCAGCGATTCTCTTGCGTCAGCCTCCCGAGTAGCTGGGATTGCAGGCGCCCGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp CCGAGCGCTTCACGCGCATCTCCCAGGCCTACGTGGTaGTGGGCAGTGCCACCCTCCGTCGCAAGTATGATC +
Preference number: 6 (lower is better)
Translates to: PSASRASPRPTW*WAVPPSVASMI
Trigger: GATCATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTGAAGCGCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 72 bp GCGACTGCTCGTATTCGCGCACGGCGCTGTATGATCTaGTCGGCGTCCCCTCCACAGCCACGCAGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: ATARIRARRCMI*SASPPQPRRPK
Trigger: TTTGGGCCTGCGTGGCTGTGGAGGGGACGCCGAGCAGATCATACAGCGCCGTGCGCGAATACGAGCAGTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS CCA 72 bp AGCGCTTCACGCGCATCTCCCAGGCCTACGTGGTGCTaGGCAGTGCCACCCTCCGTCGCAAGTATGATCGCG +
Preference number: 6 (lower is better)
Translates to: SASRASPRPTWC*AVPPSVASMIA
Trigger: CGCGATCATACTTGCGACGGAGGGTGGCACTGCCCAGCACCACGTAGGCCTGGGAGATGCGCGTGAAGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS TCA 72 bp CCCGGCACACCCAGTAGCCGAGGGACTCACCTGCTCTaGGTTCTCAGGGTACAGCTGCAGGACAGCTCGGGA +
Preference number: 6 (lower is better)
Translates to: PGTPSSRGTHLL*VLRVQLQDSSG
Trigger: TCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGGTGAGTCCCTCGGCTACTGGGTGTGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463307.5
ENST00000478670.5
CDS GCA 72 bp GAGGGACTCACCTGCTCTGAGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCCCGGACCCAGCATGGC +
Preference number: 6 (lower is better)
Translates to: EGLTCSEFSGYS*RTARDPRTQHG
Trigger: GCCATGCTGGGTCCGGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGGTGAGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478670.5
CDS CCA 72 bp GGATGGGGCTGCCCGACTGGCCCCCATGTGAATCCATaGCAAGCTTACCTCCGAGTCTGGTGGCCTCGGATG +
Preference number: 6 (lower is better)
Translates to: GWGCPTGPHVNP*QAYLRVWWPRM
Trigger: CATCCGAGGCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATGGGGGCCAGTCGGGCAGCCCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 72 bp GACAGCTCGGGATCCCCGGACCCAGCATGGCAGGGCTaGTATCCAGGCCCACCCAATAGTGCCCTTCATCTG +
Preference number: 6 (lower is better)
Translates to: DSSGSPDPAWQG*YPGPPNSALHL
Trigger: CAGATGAAGGGCACTATTGGGTGGGCCTGGATATCAGCCCTGCCATGCTGGGTCCGGGGATCCCGAGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421744.5
ENST00000430446.2
ENST00000436944.5
ENST00000478670.5
CDS TCA 72 bp CAGCTGATGGATGGGGCTGCCCGACTGGCCCCCATGTaGATCCATGGCAAGCTTACCTCCGAGTCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: QLMDGAARLAPM*IHGKLTSESGG
Trigger: GCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATGGGGGCCAGTCGGGCAGCCCCATCCATCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp ACGCAGGCCCAAATCAAGGCGGCTTACTACCGTCAGTaGTTTCTCTACCACCCGGACCGCAACTCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: TQAQIKAAYYRQ*FLYHPDRNSGS
Trigger: GCTCCCGGAGTTGCGGTCCGGGTGGTAGAGAAAGCACTGACGGTAGTAAGCCGCCTTGATTTGGGCCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 72 bp CTGGGCCTAGGAGCGAGGACTTATTCCCAGGGCGACTaGTCGTATTCGCGCACGGCGCTGTATGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: LGLGARTYSQGD*SYSRTALYDLL
Trigger: GAGCAGATCATACAGCGCCGTGCGCGAATACGAGCAGTCGCCCTGGGAATAAGTCCTCGCTCCTAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS GCA 72 bp AACTCCCCGGCACACCCAGTAGCCGAGGGACTCACCTaGTCTGAGTTCTCAGGGTACAGCTGCAGGACAGCT +
Preference number: 6 (lower is better)
Translates to: NSPAHPVAEGLT*SEFSGYSCRTA
Trigger: AGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGGTGAGTCCCTCGGCTACTGGGTGTGCCGGGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463307.5
ENST00000478670.5
CDS GCA 72 bp CCCAGGCAGCACACCGGCCCCCAGCGCTCACTTCTTTaGTTTGGCACTGTTAGGGTAGTCTACCACCATGCC +
Preference number: 6 (lower is better)
Translates to: PRQHTGPQRSLL*FGTVRVVYHHA
Trigger: GGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAGTGAGCGCTGGGGGCCGGTGTGCTGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487006.2
CDS TCA 72 bp TCGCCCAGCCATCCTGGTCTGGATATCAATCATCCGTaGGCCGGGTCCTTCCCTTCCCGCACCCCCAAATTC +
Preference number: 6 (lower is better)
Translates to: SPSHPGLDINHP*AGSFPSRTPKF
Trigger: GAATTTGGGGGTGCGGGAAGGGAAGGACCCGGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421304.5
CDS TCA 72 bp CCTGCCTTTGTGGCCTGGGTTGTGATCAGCTCCAACTaGGGAAAGAAAGGCAGCGGGTCAGGCAGCGGAGGT +
Preference number: 6 (lower is better)
Translates to: PAFVAWVVISSN*GKKGSGSGSGG
Trigger: ACCTCCGCTGCCTGACCCGCTGCCTTTCTTTCCTCAGTTGGAGCTGATCACAACCCAGGCCACAAAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS TCA 72 bp CCCAAGGGGTCAGGCAGCATAAACCTATGGTGGACGTaGGGAACATGCATGGCTGTGCCCAGCTGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PKGSGSINLWWT*GTCMAVPSCGP
Trigger: AGGCCCACAGCTGGGCACAGCCATGCATGTTCCTCACGTCCACCATAGGTTTATGCTGCCTGACCCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp GAGGGACTCACCTGCTCTGAGTTCTCAGGGTACAGCTaGAGGACAGCTCGGGATCCCCGGACGAGAACAGAA +
Preference number: 6 (lower is better)
Translates to: EGLTCSEFSGYS*RTARDPRTRTE
Trigger: TTCTGTTCTCGTCCGGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGGTGAGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS GCA 72 bp CCAGAGACAGGGCAAGCCAAGGAGCTGCCATTCGGATaGCTGAGCCTGATGAGCCAGCACAAAGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: PETGQAKELPFG*LSLMSQHKAGA
Trigger: TGCTCCTGCTTTGTGCTGGCTCATCAGGCTCAGGCATCCGAATGGCAGCTCCTTGGCTTGCCCTGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CCA 72 bp GGGATCCCCGGACCTGATGCAACCATCAAATGTGCCTaGCTTGAATGGGATGCCCTGGCCCATATCCCCCAG +
Preference number: 6 (lower is better)
Translates to: GIPGPDATIKCA*LEWDALAHIPQ
Trigger: CTGGGGGATATGGGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCATCAGGTCCGGGGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428163.5
ENST00000487006.2
CDS CCA 72 bp GGCAGAGTGGCGAACCAGGGGGCAAGAGGTGAGCCATaGGAGAAGCAGCAAGGGGGAAAGTCATCAATGGAG +
Preference number: 6 (lower is better)
Translates to: GRVANQGARGEP*EKQQGGKSSME
Trigger: CTCCATTGATGACTTTCCCCCTTGCTGCTTCTCCCATGGCTCACCTCTTGCCCCCTGGTTCGCCACTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 72 bp TCGCCCAGCCATCCTGGTCTGGATATCAATCATCCGTaGGCCCCAAATTCTACGGCCTTTCCGGGCAACGCC +
Preference number: 6 (lower is better)
Translates to: SPSHPGLDINHP*APNSTAFPGNA
Trigger: GGCGTTGCCCGGAAAGGCCGTAGAATTTGGGGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436944.5
ENST00000441822.5
CDS TCA 72 bp TTAATGGGAACCTGTGGCGGAGACACAGCTATGAGCTaGTGGACAGCTGATGGATGGGGCTGCCCGACTGGC +
Preference number: 6 (lower is better)
Translates to: LMGTCGGDTAMS*WTADGWGCPTG
Trigger: GCCAGTCGGGCAGCCCCATCCATCAGCTGTCCATCAGCTCATAGCTGTGTCTCCGCCACAGGTTCCCATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp TCAATGGAGCTAAAGGAAGGAGGTGAAGACGGGGAGTaGCCCAAAGCACAGGTCCCAAGAGAAGTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: SMELKEGGEDGE*PKAQVPREVGA
Trigger: GGCCCCCACTTCTCTTGGGACCTGTGCTTTGGGGCACTCCCCGTCTTCACCTCCTTCCTTTAGCTCCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CCA 72 bp AGTGAGGAGCAGCCAGGAAGGCTGAGGAAACCACGATaGTGGGTGGAAGGCCAAGTGAAGGAAGCGTCAAGG +
Preference number: 6 (lower is better)
Translates to: SEEQPGRLRKPR*WVEGQVKEASR
Trigger: CCTTGACGCTTCCTTCACTTGGCCTTCCACCCACCATCGTGGTTTCCTCAGCCTTCCTGGCTGCTCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CAA 90 bp CTCAACGCTGAGGTACCGAGGCCCAGAGAGGTCGGCAACTTAAAGTaGATTTACCAGAGACAGAAATCGGCACCCACCCGGGTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LNAEVPRPREVGNLK*IYQRQKSAPTRVLP
Trigger: GGGAAGGACCCGGGTGGGTGCCGATTTCTGTCTCTGGTAAATCAACTTTAAGTTGCCGACCTCTCTGGGCCTCGGTACCTCAGCGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS GCA 72 bp CTGCCAAGAGAAGGCATCCCACCCCACCTCCGCAGATaGCACCCCCTTAGGATATCAGGTCATCAAATGTGC +
Preference number: 6 (lower is better)
Translates to: LPREGIPPHLRR*HPLRISGHQMC
Trigger: GCACATTTGATGACCTGATATCCTAAGGGGGTGGCATCTGCGGAGGTGGGGTGGGATGCCTTCTCTTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463307.5
ENST00000478670.5
CDS GCA 72 bp CCGAGTCTGGTGGCCTCGGATGCCCCTTCTCTCAAATaGTCCACCTTCCCTATAACACAATTCCCCGCTCTG +
Preference number: 6 (lower is better)
Translates to: PSLVASDAPSLK*STFPITQFPAL
Trigger: CAGAGCGGGGAATTGTGTTATAGGGAAGGTGGAGCATTTGAGAGAAGGGGCATCCGAGGCCACCAGACTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CCA 72 bp CCCCATGTGAATCCATGGCAAGCTTACCTCCGAGTCTaGTGGCCTCGGATGCCCCTTCTCTCAAATGCTCCA +
Preference number: 6 (lower is better)
Translates to: PHVNPWQAYLRV*WPRMPLLSNAP
Trigger: TGGAGCATTTGAGAGAAGGGGCATCCGAGGCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CCA 72 bp CATGTGAATCCATGGCAAGCTTACCTCCGAGTCTGGTaGCCTCGGATGCCCCTTCTCTCAAATGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: HVNPWQAYLRVW*PRMPLLSNAPP
Trigger: AGGTGGAGCATTTGAGAGAAGGGGCATCCGAGGCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CAA 72 bp GAGGTACCGAGGCCCAGAGAGGTCGGCAACTTAAAGTaGATTTACCAGAGACAGAAATCGGCACCCACCCGG +
Preference number: 6 (lower is better)
Translates to: EVPRPREVGNLK*IYQRQKSAPTR
Trigger: CCGGGTGGGTGCCGATTTCTGTCTCTGGTAAATCAACTTTAAGTTGCCGACCTCTCTGGGCCTCGGTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430270.5
CDS GCA 72 bp CCTCCTTCAGAAGCCAGTCTGCTCCAGGACAAATCCTaGCTGGGAGAACTTAAGGTCGCTGTAAGCCACGTA +
Preference number: 6 (lower is better)
Translates to: PPSEASLLQDKS*LGELKVAVSHV
Trigger: TACGTGGCTTACAGCGACCTTAAGTTCTCCCAGGCAGGATTTGTCCTGGAGCAGACTGGCTTCTGAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS CCA 72 bp GCAGATAAAGAAGCTCCAATGCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCCGTGAGCCGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: ADKEAPMLAQPS*SGYQSSVSRVL
Trigger: AAGGACCCGGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421304.5
CDS GCA 72 bp CAGAACAAAGCAACTCCCCTCATTCTCACTTTCCAGTaGAGGGACCCAGCTCCCCACTCAAGTTTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: QNKATPLILTFQ*RDPAPHSSLGR
Trigger: TCTCCCTAAACTTGAGTGGGGAGCTGGGTCCCTGCACTGGAAAGTGAGAATGAGGGGAGTTGCTTTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS CCA 72 bp GTGGACGTGAGGAACATGCATGGCTGTGCCCAGCTGTaGGCCTTCCAAACACATGCATTTTGGGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: VDVRNMHGCAQL*AFQTHAFWAHF
Trigger: AAAATGAGCCCAAAATGCATGTGTTTGGAAGGCCCACAGCTGGGCACAGCCATGCATGTTCCTCACGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS CAA 90 bp GAGAGACTACCCATGGAAACTCCAGGTATAGACACTGAGGGGGCATaGGGAAACCCCAGGTGGCAAGAGACTGAAGATACACATTTGGGA +
Preference number: 6 (lower is better)
Translates to: ERLPMETPGIDTEGA*GNPRWQETEDTHLG
Trigger: TCCCAAATGTGTATCTTCAGTCTCTTGCCACCTGGGGTTTCCCAATGCCCCCTCAGTGTCTATACCTGGAGTTTCCATGGGTAGTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp AGGTCATCAAATGTGCCATCAGGGGCCACACTAGGGTaGATGTTTCCTCCTTTTCCCGCCAATCTGCATAAG +
Preference number: 6 (lower is better)
Translates to: RSSNVPSGATLG*MFPPFPANLHK
Trigger: CTTATGCAGATTGGCGGGAAAAGGAGGAAACATGCACCCTAGTGTGGCCCCTGATGGCACATTTGATGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463307.5
ENST00000478670.5
CDS CCA 72 bp GCAGATAAAGAAGCTCCAATGCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCCGTGAGTTGCGAACGT +
Preference number: 6 (lower is better)
Translates to: ADKEAPMLAQPS*SGYQSSVSCER
Trigger: ACGTTCGCAACTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265758.7
ENST00000421744.5
ENST00000423497.5
ENST00000428163.5
ENST00000432522.5
ENST00000463307.5
ENST00000478670.5
ENST00000487006.2
CDS CCA 72 bp GCAGATAAAGAAGCTCCAATGCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCCGTGAGCCCCAAATTC +
Preference number: 6 (lower is better)
Translates to: ADKEAPMLAQPS*SGYQSSVSPKF
Trigger: GAATTTGGGGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436944.5
ENST00000441822.5
CDS CCA 72 bp GCAGATAAAGAAGCTCCAATGCTCGCCCAGCCATCCTaGTCTGGATATCAATCATCCGTGAGCTTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: ADKEAPMLAQPS*SGYQSSVSLEV
Trigger: AACCTCCAAGCTCACGGATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464615.1
CDS CCA 72 bp TGCAGGGACCCAGCTCCCCACTCAAGTTTAGGGAGATaGCCACCAATTGGAATCCAGAGTCATTCATGTTAT +
Preference number: 6 (lower is better)
Translates to: CRDPAPHSSLGR*PPIGIQSHSCY
Trigger: ATAACATGAATGACTCTGGATTCCAATTGGTGGCCATCTCCCTAAACTTGAGTGGGGAGCTGGGTCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS CCA 72 bp GGTATAGACACTGAGGGGGCATTGGGAAACCCCAGGTaGCAAGAGACTGAAGATACACATTTGGGAATTAGG +
Preference number: 6 (lower is better)
Translates to: GIDTEGALGNPR*QETEDTHLGIR
Trigger: CCTAATTCCCAAATGTGTATCTTCAGTCTCTTGCCACCTGGGGTTTCCCAATGCCCCCTCAGTGTCTATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp CAGCTAAGCAGCAGTAAGCAGGCCGCTTTCTACCAATaGAATGACACATCATCACCTAGACTTCAAGAGCAC +
Preference number: 6 (lower is better)
Translates to: QLSSSKQAAFYQ*NDTSSPRLQEH
Trigger: GTGCTCTTGAAGTCTAGGTGATGATGTGTCATTGCATTGGTAGAAAGCGGCCTGCTTACTGCTGCTTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp GCATGGCTGTGCCCAGCTGTGGGCCTTCCAAACACATaGATTTTGGGCTCATTTTTCCTCTTAAATGTCTTA +
Preference number: 6 (lower is better)
Translates to: AWLCPAVGLPNT*ILGSFFLLNVL
Trigger: TAAGACATTTAAGAGGAAAAATGAGCCCAAAATGCATGTGTTTGGAAGGCCCACAGCTGGGCACAGCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS GCA 72 bp GGGTTTTCAGACTTCTTGTTAGCATTACAGAGCCACTaGACAGCAGAAATGTTGCGAACGTATTTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: GFSDFLLALQSH*TAEMLRTYFRA
Trigger: AGCCCGGAAATACGTTCGCAACATTTCTGCTGTGCAGTGGCTCTGTAATGCTAACAAGAAGTCTGAAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496153.5
CDS CCA 72 bp AGCTCCCCACTCAAGTTTAGGGAGATGGCCACCAATTaGAATCCAGAGTCATTCATGTTATTAGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SSPLKFREMATN*NPESFMLLVRN
Trigger: GTTCCTGACTAATAACATGAATGACTCTGGATTCCAATTGGTGGCCATCTCCCTAAACTTGAGTGGGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463307.5
CDS CAA 72 bp CTGTGCCCAGCTGTGGGCCTTCCAAACACATGCATTTaGGGCTCATTTTTCCTCTTAAATGTCTTAAAGGTC +
Preference number: 6 (lower is better)
Translates to: LCPAVGLPNTCI*GSFFLLNVLKV
Trigger: GACCTTTAAGACATTTAAGAGGAAAAATGAGCCCAAAATGCATGTGTTTGGAAGGCCCACAGCTGGGCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 72 bp AACCAAGTCAACTGGTATGTGTATGACTTAGAGCAGTaGAGGGTGTTAAGGAAAATCAACATGAGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: NQVNWYVYDLEQ*RVLRKINMSGE
Trigger: CTCCCCGCTCATGTTGATTTTCCTTAACACCCTTCACTGCTCTAAGTCATACACATACCAGTTGACTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 72 bp GACCAGATGTGGCTTGATGGAAATTGGTGGTGGAGTTaGCAAGAACAATTTGTGATGAGACAGAATTGTCAG +
Preference number: 6 (lower is better)
Translates to: DQMWLDGNWWWS*QEQFVMRQNCQ
Trigger: CTGACAATTCTGTCTCATCACAAATTGTTCTTGTCAACTCCACCACCAATTTCCATCAAGCCACATCTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 72 bp AAAAAGACCAGTCTTGCTGCTATGCAGAAAATAATCTaGAAGAGGCAAAGACTGCAAAGGCAAGGAGACAAC +
Preference number: 6 (lower is better)
Translates to: KKTSLAAMQKII*KRQRLQRQGDN
Trigger: GTTGTCTCCTTGCCTTTGCAGTCTTTGCCTCTTTCAGATTATTTTCTGCATAGCAGCAAGACTGGTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471215.1
CDS TCA 72 bp TCAACTTACCCACATTTACTTTTAGGACATGTCGTTTaGAGACACCAGTGTAAGGACAAGAAGGATCCTAAG +
Preference number: 6 (lower is better)
Translates to: STYPHLLLGHVV*RHQCKDKKDPK
Trigger: CTTAGGATCCTTCTTGTCCTTACACTGGTGTCTTCAAACGACATGTCCTAAAAGTAAATGTGGGTAAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471215.1